Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07861.t1 | XP_013444418.1 | 97.5 | 551 | 9 | 4 | 1 | 551 | 1 | 546 | 2.10E-306 | 1060.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07861.t1 | Q9ZS97 | 75.9 | 557 | 128 | 2 | 1 | 551 | 1 | 557 | 1.0e-245 | 850.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07861.t1 | A0A072TNQ0 | 97.5 | 551 | 9 | 4 | 1 | 551 | 1 | 546 | 1.5e-306 | 1060.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene07861 | 0.823132 | 1.63E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene07861 | 0.848302 | 6.68E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene07861 | 0.808855 | 2.52E-50 | -1.69E-46 |
| MS.gene051521 | MS.gene07861 | 0.804819 | 1.80E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene07861 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene051588 | MS.gene07861 | 0.83162 | 1.51E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene07861 | 0.835742 | 1.41E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene07861 | 0.823874 | 1.09E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene07861 | 0.82132 | 4.30E-53 | -1.69E-46 |
| MS.gene053912 | MS.gene07861 | 0.827393 | 1.60E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene07861 | 0.809753 | 1.62E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene07861 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene07861 | 0.838397 | 2.95E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene07861 | 0.815191 | 1.05E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene07861 | 0.827282 | 1.71E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene07861 | 0.834531 | 2.84E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene07861 | 0.8067 | 7.24E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene07861 | 0.824783 | 6.69E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene07861 | 0.809892 | 1.51E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene07861 | 0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene07861 | 0.802534 | 5.36E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene07861 | 0.807302 | 5.40E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene07861 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene07861 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene07861 | 0.836329 | 9.98E-57 | -1.69E-46 |
| MS.gene058090 | MS.gene07861 | 0.814648 | 1.38E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene07861 | 0.850239 | 1.93E-60 | -1.69E-46 |
| MS.gene058700 | MS.gene07861 | 0.85866 | 7.07E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene07861 | 0.804085 | 2.56E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene07861 | 0.819157 | 1.35E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene07861 | 0.808386 | 3.18E-50 | -1.69E-46 |
| MS.gene059868 | MS.gene07861 | 0.807847 | 4.14E-50 | -1.69E-46 |
| MS.gene059946 | MS.gene07861 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene07861 | 0.840991 | 6.23E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene07861 | 0.802922 | 4.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07861.t1 | MTR_8g019500 | 97.096 | 551 | 11 | 3 | 1 | 551 | 1 | 546 | 0.0 | 1107 |
| MS.gene07861.t1 | MTR_7g038720 | 94.414 | 555 | 19 | 6 | 1 | 551 | 1 | 547 | 0.0 | 1071 |
| MS.gene07861.t1 | MTR_7g030030 | 94.414 | 555 | 19 | 6 | 1 | 551 | 1 | 547 | 0.0 | 1071 |
| MS.gene07861.t1 | MTR_5g014290 | 25.240 | 313 | 202 | 9 | 248 | 542 | 171 | 469 | 2.93e-17 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07861.t1 | AT4G04770 | 76.199 | 563 | 116 | 3 | 1 | 551 | 1 | 557 | 0.0 | 885 |
| MS.gene07861.t1 | AT5G44316 | 56.732 | 557 | 148 | 8 | 1 | 551 | 1 | 470 | 0.0 | 600 |
| MS.gene07861.t1 | AT1G32500 | 24.923 | 325 | 222 | 6 | 218 | 532 | 148 | 460 | 1.29e-19 | 92.4 |
Find 148 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTTGGTTCTTTCATTT+TGG | 0.109645 | 8.3:-71483457 | None:intergenic |
| GATTTGGTTAGGAGTTATTT+AGG | 0.182519 | 8.3:+71483756 | MS.gene07861:CDS |
| AATGAGCTTCCCGATGAATT+TGG | 0.191847 | 8.3:+71486015 | MS.gene07861:CDS |
| TAGGAGTATGGTGGAGTATT+TGG | 0.220424 | 8.3:+71483956 | MS.gene07861:CDS |
| TTAATCTCGGGTTTGTTCTT+AGG | 0.262260 | 8.3:-71483534 | None:intergenic |
| TTGAACTTGAACGGTGGTTT+TGG | 0.284114 | 8.3:-71483202 | None:intergenic |
| TTGGGAGGAAGTGGGTTTGA+TGG | 0.306627 | 8.3:-71483143 | None:intergenic |
| TGATAAGGGTGATTTGTGTT+TGG | 0.317122 | 8.3:-71483178 | None:intergenic |
| CGCGATTACGACAAGAAATT+CGG | 0.317548 | 8.3:+71483303 | MS.gene07861:CDS |
| ACTTGTTCAGGTTCAGTCTA+AGG | 0.317603 | 8.3:+71484391 | MS.gene07861:CDS |
| TCGTGGACCCAGGTGGAAAC+TGG | 0.318338 | 8.3:+71484170 | MS.gene07861:CDS |
| AAACGATTCTGTTCGTTTAA+CGG | 0.320292 | 8.3:-71483612 | None:intergenic |
| GATAAGGGTGATTTGTGTTT+GGG | 0.320412 | 8.3:-71483177 | None:intergenic |
| GAAGTATCCTAGCGTGGTTT+TGG | 0.337273 | 8.3:+71484208 | MS.gene07861:CDS |
| GTTTGTGTTGAAAGGCCTTT+TGG | 0.339296 | 8.3:-71483357 | None:intergenic |
| TTGAGTGGGTTGTGGGTGTA+AGG | 0.351235 | 8.3:-71483091 | None:intergenic |
| TAATTATCAGCAGGCGGATA+CGG | 0.359185 | 8.3:+71484277 | MS.gene07861:CDS |
| CAGTGTGATTCCATGCTTAT+TGG | 0.364179 | 8.3:+71484437 | MS.gene07861:CDS |
| TGCTGGTTTGAGTGGGTTGT+GGG | 0.366969 | 8.3:-71483098 | None:intergenic |
| CTTTGATTGTGGCGGATGAT+AGG | 0.369308 | 8.3:+71483937 | MS.gene07861:CDS |
| CACCTGGGTCCACGATATCT+TGG | 0.371224 | 8.3:-71484162 | None:intergenic |
| TGTTAAGGAGTATCCTGATT+TGG | 0.374858 | 8.3:+71483740 | MS.gene07861:CDS |
| ATTTGGTTAGGAGTTATTTA+GGG | 0.377879 | 8.3:+71483757 | MS.gene07861:CDS |
| TCATGCTCAATTCTTGCTGT+TGG | 0.379819 | 8.3:-71485880 | None:intergenic |
| CCAAAATGAAAGAACCAAAT+TGG | 0.380581 | 8.3:+71483457 | MS.gene07861:CDS |
| AAATAACTCCTAACCAAATC+AGG | 0.383693 | 8.3:-71483753 | None:intergenic |
| GAGGCTAGTACGTCGAAAAT+TGG | 0.384901 | 8.3:+71485901 | MS.gene07861:CDS |
| CTCCTTAACAGCATCGGAAA+TGG | 0.385724 | 8.3:-71483727 | None:intergenic |
| TTTCTATTGCAACTACTCAT+AGG | 0.386827 | 8.3:+71483670 | MS.gene07861:CDS |
| TTCCATTTCCGATGCTGTTA+AGG | 0.387550 | 8.3:+71483725 | MS.gene07861:CDS |
| AGTATTCGACCGTGCAGAAT+TGG | 0.394659 | 8.3:+71484063 | MS.gene07861:CDS |
| TCTTGTCGTAATCGCGGTTA+CGG | 0.398938 | 8.3:-71483296 | None:intergenic |
| AGGATTAATGCGTTGGAGAC+GGG | 0.399896 | 8.3:+71483900 | MS.gene07861:CDS |
| CTGCTGGTTTGAGTGGGTTG+TGG | 0.402522 | 8.3:-71483099 | None:intergenic |
| CTCATGAGCTTGAAGCTTGA+GGG | 0.405460 | 8.3:+71486054 | MS.gene07861:CDS |
| TTGTTATAGAGGACTTGTTC+AGG | 0.406394 | 8.3:+71484379 | MS.gene07861:CDS |
| TCCAATCAGGTTCGGATTTG+AGG | 0.406509 | 8.3:-71483398 | None:intergenic |
| CCCTCAAATCCGAACCTGAT+TGG | 0.407574 | 8.3:+71483397 | MS.gene07861:CDS |
| AGGAGTATCCTGATTTGGTT+AGG | 0.417068 | 8.3:+71483745 | MS.gene07861:CDS |
| GGGACTAAGATGATACATAA+AGG | 0.426012 | 8.3:+71484299 | MS.gene07861:CDS |
| CAATACCTATCCTTACATTC+AGG | 0.426835 | 8.3:+71484475 | MS.gene07861:CDS |
| AAACTGGGTCCGCGATTACT+TGG | 0.428618 | 8.3:+71484186 | MS.gene07861:CDS |
| TATGTGTTATCAGACCAATT+TGG | 0.428737 | 8.3:-71483471 | None:intergenic |
| GCAATGGCTGCTATGATCTC+TGG | 0.432036 | 8.3:+71485973 | MS.gene07861:CDS |
| TTCTTGTAAGCTATTAATCT+CGG | 0.433516 | 8.3:-71483547 | None:intergenic |
| CCAATCAGGTTCGGATTTGA+GGG | 0.434206 | 8.3:-71483397 | None:intergenic |
| CGAAAATTGAGCATCCAATC+AGG | 0.439256 | 8.3:-71483411 | None:intergenic |
| ATATCTTGAAAATCTATAGT+TGG | 0.442228 | 8.3:-71483495 | None:intergenic |
| ATATCCAAGGGTATTTCTGC+TGG | 0.454886 | 8.3:+71484344 | MS.gene07861:CDS |
| AACGAATGGTTTGTGTTGAA+AGG | 0.459496 | 8.3:-71483365 | None:intergenic |
| AATTATCAGCAGGCGGATAC+GGG | 0.460829 | 8.3:+71484278 | MS.gene07861:CDS |
| GTATTTCTGCTGGACATTCA+AGG | 0.462029 | 8.3:+71484354 | MS.gene07861:CDS |
| TGGTACGCGGGTGATGAGAA+TGG | 0.462995 | 8.3:+71484083 | MS.gene07861:CDS |
| CATGGGACACTTAACACCCT+TGG | 0.464843 | 8.3:-71483859 | None:intergenic |
| TCGCGGACCCAGTTTCCACC+TGG | 0.469453 | 8.3:-71484178 | None:intergenic |
| GTTGAGTTGTACTGCGGAGA+GGG | 0.471324 | 8.3:+71484029 | MS.gene07861:CDS |
| ATTGAGCATCCAATCAGGTT+CGG | 0.471647 | 8.3:-71483406 | None:intergenic |
| TATCTTGAAAATCTATAGTT+GGG | 0.473477 | 8.3:-71483494 | None:intergenic |
| CTCGTTTGTTTATATACCCA+AGG | 0.473524 | 8.3:+71483842 | MS.gene07861:CDS |
| GGACTAAGATGATACATAAA+GGG | 0.477352 | 8.3:+71484300 | MS.gene07861:CDS |
| TGTGGCGGATGATAGGAGTA+TGG | 0.485495 | 8.3:+71483944 | MS.gene07861:CDS |
| ATGGGACACTTAACACCCTT+GGG | 0.490087 | 8.3:-71483858 | None:intergenic |
| TCTTGTAAGCTATTAATCTC+GGG | 0.493336 | 8.3:-71483546 | None:intergenic |
| ACCTCGGAGCCAAATTCATC+GGG | 0.494987 | 8.3:-71486024 | None:intergenic |
| CGCGGTTACGGAGAATTTCA+CGG | 0.497813 | 8.3:-71483284 | None:intergenic |
| CTGAATGTAAGGATAGGTAT+TGG | 0.505970 | 8.3:-71484474 | None:intergenic |
| CATTCAAGGAATTGTTATAG+AGG | 0.510304 | 8.3:+71484368 | MS.gene07861:CDS |
| TCGAAGTATCTCAAAAGCTC+AGG | 0.512282 | 8.3:-71483576 | None:intergenic |
| TCATCGGTAGATGAAGAAGT+TGG | 0.514480 | 8.3:-71483255 | None:intergenic |
| TTGAGATACTTCGATAAGCT+CGG | 0.521652 | 8.3:+71483585 | MS.gene07861:CDS |
| TAGGATTAATGCGTTGGAGA+CGG | 0.522422 | 8.3:+71483899 | MS.gene07861:CDS |
| ACCAGCACACAATCCTCTCT+TGG | 0.524383 | 8.3:-71484132 | None:intergenic |
| AAGTGGGTTTGATGGAGAAG+TGG | 0.525503 | 8.3:-71483135 | None:intergenic |
| ACTCATGAGCTTGAAGCTTG+AGG | 0.525889 | 8.3:+71486053 | MS.gene07861:CDS |
| CACCTCGGAGCCAAATTCAT+CGG | 0.533895 | 8.3:-71486025 | None:intergenic |
| GGTACGCGGGTGATGAGAAT+GGG | 0.534979 | 8.3:+71484084 | MS.gene07861:CDS |
| TGAGAAGCTGCTGGTTTGAG+TGG | 0.535482 | 8.3:-71483106 | None:intergenic |
| GAGGGCTGAGATTAAACGAA+TGG | 0.537778 | 8.3:-71483379 | None:intergenic |
| TTTGACGAATAATTATCAGC+AGG | 0.538461 | 8.3:+71484268 | MS.gene07861:CDS |
| CGTGGACCCAGGTGGAAACT+GGG | 0.539207 | 8.3:+71484171 | MS.gene07861:CDS |
| AGCTGATTCTTATCATAAGA+AGG | 0.540471 | 8.3:-71483993 | None:intergenic |
| ATTCGAGAGGACTTTGATTG+TGG | 0.541310 | 8.3:+71483926 | MS.gene07861:CDS |
| CGCGGACCCAGTTTCCACCT+GGG | 0.544634 | 8.3:-71484177 | None:intergenic |
| AAAGAGTCGGATTATATCCA+AGG | 0.544871 | 8.3:+71484331 | MS.gene07861:CDS |
| GTGATGAGAATGGGAAAGGT+GGG | 0.548593 | 8.3:+71484093 | MS.gene07861:CDS |
| CAAGCTTCAAGCTCATGAGT+TGG | 0.553479 | 8.3:-71486050 | None:intergenic |
| AACAGCATCCACCGCAACAT+TGG | 0.553710 | 8.3:-71483637 | None:intergenic |
| GGATTAATGCGTTGGAGACG+GGG | 0.554424 | 8.3:+71483901 | MS.gene07861:CDS |
| CGAGAGGACTTTGATTGTGG+CGG | 0.556728 | 8.3:+71483929 | MS.gene07861:CDS |
| GGTGATGAGAATGGGAAAGG+TGG | 0.557171 | 8.3:+71484092 | MS.gene07861:CDS |
| TCTCCCTCCAAAACCACGCT+AGG | 0.557620 | 8.3:-71484215 | None:intergenic |
| ATAAGGGTGATTTGTGTTTG+GGG | 0.558175 | 8.3:-71483176 | None:intergenic |
| GAGAAGCTGCTGGTTTGAGT+GGG | 0.558811 | 8.3:-71483105 | None:intergenic |
| AGGAAGACACTTGAGAAGGC+TGG | 0.560350 | 8.3:+71483690 | MS.gene07861:CDS |
| CGTAACTAACTGCGTCGGAA+CGG | 0.560490 | 8.3:-71483227 | None:intergenic |
| TTGGAGGGAGATGAGAGTGT+TGG | 0.560529 | 8.3:+71484227 | MS.gene07861:CDS |
| TAAGGGTGATTTGTGTTTGG+GGG | 0.560811 | 8.3:-71483175 | None:intergenic |
| GATTCTGTCACAATCCCAAA+AGG | 0.560870 | 8.3:+71483342 | MS.gene07861:CDS |
| CGCATTAATCCTAAAATACG+TGG | 0.567141 | 8.3:-71483889 | None:intergenic |
| AAAATACGTGGATATCTGCA+TGG | 0.570541 | 8.3:-71483877 | None:intergenic |
| GGAACGGATTTGAACTTGAA+CGG | 0.574156 | 8.3:-71483211 | None:intergenic |
| TGTTACCTGAATGTAAGGAT+AGG | 0.574441 | 8.3:-71484480 | None:intergenic |
| TCCGTTGAGAAGAGAAGTCA+TGG | 0.574500 | 8.3:-71483058 | None:intergenic |
| TTGAGTTGTACTGCGGAGAG+GGG | 0.578213 | 8.3:+71484030 | MS.gene07861:CDS |
| TCGTTTGTTTATATACCCAA+GGG | 0.580611 | 8.3:+71483843 | MS.gene07861:CDS |
| AGGATACTCCTTAACAGCAT+CGG | 0.584101 | 8.3:-71483733 | None:intergenic |
| TCCATGACTTCTCTTCTCAA+CGG | 0.595997 | 8.3:+71483057 | None:intergenic |
| AGTATGGTGGAGTATTTGGA+AGG | 0.598035 | 8.3:+71483960 | MS.gene07861:CDS |
| TCATGAGCTTGAAGCTTGAG+GGG | 0.600976 | 8.3:+71486055 | MS.gene07861:CDS |
| GACGAATAATTATCAGCAGG+CGG | 0.602278 | 8.3:+71484271 | MS.gene07861:CDS |
| ACCAAGAGAGGATTGTGTGC+TGG | 0.602369 | 8.3:+71484131 | MS.gene07861:CDS |
| GCATAATAATTGTCGTCGCT+AGG | 0.602620 | 8.3:-71483789 | None:intergenic |
| TTGAAGCTTGAGGGGTCAGT+CGG | 0.603318 | 8.3:+71486063 | MS.gene07861:CDS |
| ACGGATTTGAACTTGAACGG+TGG | 0.603758 | 8.3:-71483208 | None:intergenic |
| AAGGGAAGAATACAAAGAGT+CGG | 0.607886 | 8.3:+71484318 | MS.gene07861:CDS |
| AAATACGTGGATATCTGCAT+GGG | 0.609153 | 8.3:-71483876 | None:intergenic |
| TGTTGAGTTGTACTGCGGAG+AGG | 0.612602 | 8.3:+71484028 | MS.gene07861:CDS |
| GTCCAAGATATCGTGGACCC+AGG | 0.612745 | 8.3:+71484160 | MS.gene07861:CDS |
| TCGTTTAGCCAATGTTGCGG+TGG | 0.619269 | 8.3:+71483629 | MS.gene07861:CDS |
| GCGGGTGATGAGAATGGGAA+AGG | 0.620116 | 8.3:+71484089 | MS.gene07861:CDS |
| ATGTCCAGCAGAAATACCCT+TGG | 0.626161 | 8.3:-71484348 | None:intergenic |
| TCCCGATGAATTTGGCTCCG+AGG | 0.627231 | 8.3:+71486023 | MS.gene07861:CDS |
| AGCACTATCACCAATAAGCA+TGG | 0.629725 | 8.3:-71484447 | None:intergenic |
| TGAGTTGTACTGCGGAGAGG+GGG | 0.630104 | 8.3:+71484031 | MS.gene07861:CDS |
| AACAGCAAGAATTGAGCATG+AGG | 0.637018 | 8.3:+71485882 | MS.gene07861:CDS |
| CGAATTTCTTGTCGTAATCG+CGG | 0.638662 | 8.3:-71483302 | None:intergenic |
| TGGAGACGGGGCAATTCGAG+AGG | 0.640324 | 8.3:+71483913 | MS.gene07861:CDS |
| GGCGGATGATAGGAGTATGG+TGG | 0.641159 | 8.3:+71483947 | MS.gene07861:CDS |
| GAATCGTTTAGCCAATGTTG+CGG | 0.646437 | 8.3:+71483626 | MS.gene07861:CDS |
| GTAAGAAGTCCAAGATATCG+TGG | 0.647466 | 8.3:+71484153 | MS.gene07861:CDS |
| AAGAGTCGGATTATATCCAA+GGG | 0.647534 | 8.3:+71484332 | MS.gene07861:CDS |
| GCTCATGAGTTGGTTCACCT+CGG | 0.650340 | 8.3:-71486040 | None:intergenic |
| CAAGATATCGTGGACCCAGG+TGG | 0.652885 | 8.3:+71484163 | MS.gene07861:CDS |
| ATTATCAGCAGGCGGATACG+GGG | 0.656328 | 8.3:+71484279 | MS.gene07861:CDS |
| TCATAGGAAGACACTTGAGA+AGG | 0.657651 | 8.3:+71483686 | MS.gene07861:CDS |
| GACCGTGCAGAATTGGTACG+CGG | 0.659357 | 8.3:+71484070 | MS.gene07861:CDS |
| GAAGCTCATTGAAGACATCA+CGG | 0.661065 | 8.3:-71486002 | None:intergenic |
| TGTTCAGGTTCAGTCTAAGG+CGG | 0.661219 | 8.3:+71484394 | MS.gene07861:CDS |
| TACTTGGAAGTATCCTAGCG+TGG | 0.661521 | 8.3:+71484202 | MS.gene07861:CDS |
| GTATGGTGGAGTATTTGGAA+GGG | 0.671768 | 8.3:+71483961 | MS.gene07861:CDS |
| ATTCTTATCATAAGAAGGCG+CGG | 0.675463 | 8.3:-71483988 | None:intergenic |
| TAAGAATCAGCTTCATGCCG+CGG | 0.677375 | 8.3:+71484004 | MS.gene07861:CDS |
| AGGATACTTCCAAGTAATCG+CGG | 0.691757 | 8.3:-71484195 | None:intergenic |
| AGAATCGTAACTAACTGCGT+CGG | 0.698600 | 8.3:-71483232 | None:intergenic |
| ACCGTGCAGAATTGGTACGC+GGG | 0.705865 | 8.3:+71484071 | MS.gene07861:CDS |
| ACCCGCGTACCAATTCTGCA+CGG | 0.716573 | 8.3:-71484072 | None:intergenic |
| GCGGTTGTTGAGTTGTACTG+CGG | 0.754954 | 8.3:+71484023 | MS.gene07861:CDS |
| GCAGTACAACTCAACAACCG+CGG | 0.768084 | 8.3:-71484021 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTATATATTTTCTAAGAT+TGG | + | chr8.3:71484702-71484721 | MS.gene07861:intron | 15.0% |
| !! | AAAATAAGAAGGAAACAAAT+AGG | - | chr8.3:71485775-71485794 | None:intergenic | 20.0% |
| !! | AAAATAGTTCATTGTTGATA+TGG | + | chr8.3:71485681-71485700 | MS.gene07861:intron | 20.0% |
| !! | ACATTACAGAATAGAAAAAA+GGG | - | chr8.3:71485800-71485819 | None:intergenic | 20.0% |
| !! | ATATCTTGAAAATCTATAGT+TGG | - | chr8.3:71483498-71483517 | None:intergenic | 20.0% |
| !! | GTTCAATCAATATAGAAAAT+GGG | - | chr8.3:71485566-71485585 | None:intergenic | 20.0% |
| !! | TATCTTGAAAATCTATAGTT+GGG | - | chr8.3:71483497-71483516 | None:intergenic | 20.0% |
| !! | TCTAAAAAAAAAAACTGTTG+TGG | + | chr8.3:71485369-71485388 | MS.gene07861:intron | 20.0% |
| !! | TGATTGATAAGTTTAAAAGA+TGG | + | chr8.3:71484616-71484635 | MS.gene07861:intron | 20.0% |
| !! | TGTTCAATCAATATAGAAAA+TGG | - | chr8.3:71485567-71485586 | None:intergenic | 20.0% |
| !! | TTCAATCAATATAGAAAATG+GGG | - | chr8.3:71485565-71485584 | None:intergenic | 20.0% |
| !!! | ATGCTTTTAGTTAATACTTT+TGG | + | chr8.3:71484588-71484607 | MS.gene07861:intron | 20.0% |
| ! | AAAAAAGGGTGAAAATAAGA+AGG | - | chr8.3:71485786-71485805 | None:intergenic | 25.0% |
| ! | AAAAATGTTACCTGAATGTA+AGG | - | chr8.3:71484488-71484507 | None:intergenic | 25.0% |
| ! | AATAGACTATGAAAAAGCAA+TGG | + | chr8.3:71485957-71485976 | MS.gene07861:CDS | 25.0% |
| ! | ATGGGAATTTCAAAATATGT+AGG | + | chr8.3:71484651-71484670 | MS.gene07861:intron | 25.0% |
| ! | ATTTGGTTAGGAGTTATTTA+GGG | + | chr8.3:71483757-71483776 | MS.gene07861:CDS | 25.0% |
| ! | GACATTACAGAATAGAAAAA+AGG | - | chr8.3:71485801-71485820 | None:intergenic | 25.0% |
| ! | TCTATATCAATATTACTGTG+AGG | - | chr8.3:71484895-71484914 | None:intergenic | 25.0% |
| ! | TTCTTGTAAGCTATTAATCT+CGG | - | chr8.3:71483550-71483569 | None:intergenic | 25.0% |
| ! | TTTCTTCCATAACTTCAAAT+TGG | - | chr8.3:71484871-71484890 | None:intergenic | 25.0% |
| !! | AACTATTTGATGTTAGGTTT+TGG | + | chr8.3:71485524-71485543 | MS.gene07861:intron | 25.0% |
| !! | ATATTGATTGAACACAACTT+TGG | + | chr8.3:71485573-71485592 | MS.gene07861:intron | 25.0% |
| !! | ATTTGGAACTTGATATAATC+AGG | - | chr8.3:71484987-71485006 | None:intergenic | 25.0% |
| !! | TGAAATTGCAATTGTTTTCT+AGG | + | chr8.3:71485849-71485868 | MS.gene07861:intron | 25.0% |
| !! | TTTGGAACTTGATATAATCA+GGG | - | chr8.3:71484986-71485005 | None:intergenic | 25.0% |
| !!! | AGTTTTTGGTTTGTTTGTTT+TGG | + | chr8.3:71485284-71485303 | MS.gene07861:intron | 25.0% |
| !!! | GTGTCTTTTATTTTGTTTAC+AGG | + | chr8.3:71485624-71485643 | MS.gene07861:intron | 25.0% |
| !!! | TCTTTTATTTTGTTTACAGG+AGG | + | chr8.3:71485627-71485646 | MS.gene07861:intron | 25.0% |
| AAAATGGGGTCATATAAATC+AGG | - | chr8.3:71485551-71485570 | None:intergenic | 30.0% | |
| AAACGATTCTGTTCGTTTAA+CGG | - | chr8.3:71483615-71483634 | None:intergenic | 30.0% | |
| AAATAACTCCTAACCAAATC+AGG | - | chr8.3:71483756-71483775 | None:intergenic | 30.0% | |
| AAGTTTAAAAGATGGCGATA+AGG | + | chr8.3:71484624-71484643 | MS.gene07861:intron | 30.0% | |
| ACAAACAAACCAAAAACTGA+TGG | - | chr8.3:71485282-71485301 | None:intergenic | 30.0% | |
| ACATGCAAATACAATGACTT+AGG | - | chr8.3:71484780-71484799 | None:intergenic | 30.0% | |
| ACTAAAGTTGAAAGCAAAAC+AGG | - | chr8.3:71484518-71484537 | None:intergenic | 30.0% | |
| AGAAGAACACTAGAAATTGT+TGG | + | chr8.3:71485491-71485510 | MS.gene07861:intron | 30.0% | |
| CATTCAAGGAATTGTTATAG+AGG | + | chr8.3:71484368-71484387 | MS.gene07861:CDS | 30.0% | |
| CCAAAATGAAAGAACCAAAT+TGG | + | chr8.3:71483457-71483476 | MS.gene07861:CDS | 30.0% | |
| GGACTAAGATGATACATAAA+GGG | + | chr8.3:71484300-71484319 | MS.gene07861:CDS | 30.0% | |
| TATGTGTTATCAGACCAATT+TGG | - | chr8.3:71483474-71483493 | None:intergenic | 30.0% | |
| TCGTTTGTTTATATACCCAA+GGG | + | chr8.3:71483843-71483862 | MS.gene07861:CDS | 30.0% | |
| TCTTGTAAGCTATTAATCTC+GGG | - | chr8.3:71483549-71483568 | None:intergenic | 30.0% | |
| TTTCTATTGCAACTACTCAT+AGG | + | chr8.3:71483670-71483689 | MS.gene07861:CDS | 30.0% | |
| TTTGACGAATAATTATCAGC+AGG | + | chr8.3:71484268-71484287 | MS.gene07861:CDS | 30.0% | |
| ! | AATTTCACGGATTTTGTCAT+CGG | - | chr8.3:71483274-71483293 | None:intergenic | 30.0% |
| ! | ACTTGACCAATTTGAAGTTA+TGG | + | chr8.3:71484862-71484881 | MS.gene07861:intron | 30.0% |
| ! | AGCTGATTCTTATCATAAGA+AGG | - | chr8.3:71483996-71484015 | None:intergenic | 30.0% |
| ! | GATTTGGTTAGGAGTTATTT+AGG | + | chr8.3:71483756-71483775 | MS.gene07861:CDS | 30.0% |
| ! | GCTTTGATTTAAGCACTATA+TGG | + | chr8.3:71485403-71485422 | MS.gene07861:intron | 30.0% |
| ! | TATAATTTTGTGACCAAGAG+AGG | + | chr8.3:71484119-71484138 | MS.gene07861:CDS | 30.0% |
| !! | TTGTTTTACTTTCAACAGAG+AGG | + | chr8.3:71485934-71485953 | MS.gene07861:CDS | 30.0% |
| !!! | ACTTTTTCAACTAATACACG+TGG | + | chr8.3:71485449-71485468 | MS.gene07861:intron | 30.0% |
| !!! | CCAATTTGGTTCTTTCATTT+TGG | - | chr8.3:71483460-71483479 | None:intergenic | 30.0% |
| !!! | GTATTTTAGGATTAATGCGT+TGG | + | chr8.3:71483893-71483912 | MS.gene07861:CDS | 30.0% |
| AAAATACGTGGATATCTGCA+TGG | - | chr8.3:71483880-71483899 | None:intergenic | 35.0% | |
| AAAGAGTCGGATTATATCCA+AGG | + | chr8.3:71484331-71484350 | MS.gene07861:CDS | 35.0% | |
| AAATACGTGGATATCTGCAT+GGG | - | chr8.3:71483879-71483898 | None:intergenic | 35.0% | |
| AAGAGTCGGATTATATCCAA+GGG | + | chr8.3:71484332-71484351 | MS.gene07861:CDS | 35.0% | |
| AAGCCTAGAAAACAAACACA+CGG | - | chr8.3:71485213-71485232 | None:intergenic | 35.0% | |
| AAGGGAAGAATACAAAGAGT+CGG | + | chr8.3:71484318-71484337 | MS.gene07861:CDS | 35.0% | |
| ACCTAACATCAAATAGTTGC+AGG | - | chr8.3:71485522-71485541 | None:intergenic | 35.0% | |
| ATTCTTATCATAAGAAGGCG+CGG | - | chr8.3:71483991-71484010 | None:intergenic | 35.0% | |
| CAATACCTATCCTTACATTC+AGG | + | chr8.3:71484475-71484494 | MS.gene07861:CDS | 35.0% | |
| CGCATTAATCCTAAAATACG+TGG | - | chr8.3:71483892-71483911 | None:intergenic | 35.0% | |
| CGTGGTCTAGATCAAATTAA+TGG | + | chr8.3:71485467-71485486 | MS.gene07861:intron | 35.0% | |
| CTCGTTTGTTTATATACCCA+AGG | + | chr8.3:71483842-71483861 | MS.gene07861:CDS | 35.0% | |
| CTGAATGTAAGGATAGGTAT+TGG | - | chr8.3:71484477-71484496 | None:intergenic | 35.0% | |
| GAAAGGAGAGACAGATATAA+AGG | + | chr8.3:71484828-71484847 | MS.gene07861:intron | 35.0% | |
| GAAGTAGTAGGAGTTAACTT+GGG | - | chr8.3:71485753-71485772 | None:intergenic | 35.0% | |
| GCATGAACATCTGTATGATT+TGG | - | chr8.3:71485004-71485023 | None:intergenic | 35.0% | |
| GGAAACAAATAGGAAGTAGT+AGG | - | chr8.3:71485765-71485784 | None:intergenic | 35.0% | |
| GGGACTAAGATGATACATAA+AGG | + | chr8.3:71484299-71484318 | MS.gene07861:CDS | 35.0% | |
| TCCATGTTATGCTTGATACA+AGG | - | chr8.3:71485026-71485045 | None:intergenic | 35.0% | |
| TCCTGCAACTATTTGATGTT+AGG | + | chr8.3:71485518-71485537 | MS.gene07861:intron | 35.0% | |
| TGTTACCTGAATGTAAGGAT+AGG | - | chr8.3:71484483-71484502 | None:intergenic | 35.0% | |
| TTGAGATACTTCGATAAGCT+CGG | + | chr8.3:71483585-71483604 | MS.gene07861:CDS | 35.0% | |
| ! | AACGAATGGTTTGTGTTGAA+AGG | - | chr8.3:71483368-71483387 | None:intergenic | 35.0% |
| ! | ATAAGGGTGATTTGTGTTTG+GGG | - | chr8.3:71483179-71483198 | None:intergenic | 35.0% |
| ! | GATAAGGGTGATTTGTGTTT+GGG | - | chr8.3:71483180-71483199 | None:intergenic | 35.0% |
| ! | TCTAGGCTTTTTATGTTTGC+TGG | + | chr8.3:71485224-71485243 | MS.gene07861:intron | 35.0% |
| ! | TGATAAGGGTGATTTGTGTT+TGG | - | chr8.3:71483181-71483200 | None:intergenic | 35.0% |
| ! | TGCAGATATCCACGTATTTT+AGG | + | chr8.3:71483880-71483899 | MS.gene07861:CDS | 35.0% |
| ! | TTAATCTCGGGTTTGTTCTT+AGG | - | chr8.3:71483537-71483556 | None:intergenic | 35.0% |
| ! | TTGTTATAGAGGACTTGTTC+AGG | + | chr8.3:71484379-71484398 | MS.gene07861:CDS | 35.0% |
| ! | TTTGTGTTGAAAGGCCTTTT+GGG | - | chr8.3:71483359-71483378 | None:intergenic | 35.0% |
| !! | CATTTTGGAGAATTTCTCGA+AGG | - | chr8.3:71483445-71483464 | None:intergenic | 35.0% |
| !! | TGTTAAGGAGTATCCTGATT+TGG | + | chr8.3:71483740-71483759 | MS.gene07861:CDS | 35.0% |
| !! | TGTTGTGGTTTCTAGTTGAA+AGG | + | chr8.3:71484811-71484830 | MS.gene07861:intron | 35.0% |
| !!! | GAGTGTTGGTGAGTTTTATT+CGG | + | chr8.3:71484241-71484260 | MS.gene07861:CDS | 35.0% |
| AAAAACAGAACTGGCAGAAC+AGG | - | chr8.3:71485128-71485147 | None:intergenic | 40.0% | |
| AACAGCAAGAATTGAGCATG+AGG | + | chr8.3:71485882-71485901 | MS.gene07861:CDS | 40.0% | |
| AACAGGTTCTGCATCTGATA+CGG | - | chr8.3:71485111-71485130 | None:intergenic | 40.0% | |
| AATGAGCTTCCCGATGAATT+TGG | + | chr8.3:71486015-71486034 | MS.gene07861:CDS | 40.0% | |
| ACAAACCAAAAACTGATGGC+AGG | - | chr8.3:71485278-71485297 | None:intergenic | 40.0% | |
| AGAATCGTAACTAACTGCGT+CGG | - | chr8.3:71483235-71483254 | None:intergenic | 40.0% | |
| AGCACTATCACCAATAAGCA+TGG | - | chr8.3:71484450-71484469 | None:intergenic | 40.0% | |
| AGGATACTCCTTAACAGCAT+CGG | - | chr8.3:71483736-71483755 | None:intergenic | 40.0% | |
| AGGATACTTCCAAGTAATCG+CGG | - | chr8.3:71484198-71484217 | None:intergenic | 40.0% | |
| ATCACACATGCACCAAAACA+CGG | - | chr8.3:71485181-71485200 | None:intergenic | 40.0% | |
| ATTCGAGAGGACTTTGATTG+TGG | + | chr8.3:71483926-71483945 | MS.gene07861:CDS | 40.0% | |
| ATTGAGCATCCAATCAGGTT+CGG | - | chr8.3:71483409-71483428 | None:intergenic | 40.0% | |
| CAGTGTGATTCCATGCTTAT+TGG | + | chr8.3:71484437-71484456 | MS.gene07861:CDS | 40.0% | |
| CGAAAATTGAGCATCCAATC+AGG | - | chr8.3:71483414-71483433 | None:intergenic | 40.0% | |
| CGAATTTCTTGTCGTAATCG+CGG | - | chr8.3:71483305-71483324 | None:intergenic | 40.0% | |
| CGCGATTACGACAAGAAATT+CGG | + | chr8.3:71483303-71483322 | MS.gene07861:CDS | 40.0% | |
| GAAGCTCATTGAAGACATCA+CGG | - | chr8.3:71486005-71486024 | None:intergenic | 40.0% | |
| GAATCGTTTAGCCAATGTTG+CGG | + | chr8.3:71483626-71483645 | MS.gene07861:CDS | 40.0% | |
| GACGAATAATTATCAGCAGG+CGG | + | chr8.3:71484271-71484290 | MS.gene07861:CDS | 40.0% | |
| GATTCTGTCACAATCCCAAA+AGG | + | chr8.3:71483342-71483361 | MS.gene07861:CDS | 40.0% | |
| GCATAATAATTGTCGTCGCT+AGG | - | chr8.3:71483792-71483811 | None:intergenic | 40.0% | |
| GCCTTGTATCAAGCATAACA+TGG | + | chr8.3:71485022-71485041 | MS.gene07861:intron | 40.0% | |
| GCTAAAACTCTTGCAGTGTT+TGG | + | chr8.3:71485649-71485668 | MS.gene07861:intron | 40.0% | |
| GGAAGTAGTAGGAGTTAACT+TGG | - | chr8.3:71485754-71485773 | None:intergenic | 40.0% | |
| GTAAGAAGTCCAAGATATCG+TGG | + | chr8.3:71484153-71484172 | MS.gene07861:CDS | 40.0% | |
| TAATTATCAGCAGGCGGATA+CGG | + | chr8.3:71484277-71484296 | MS.gene07861:CDS | 40.0% | |
| TAGGATTAATGCGTTGGAGA+CGG | + | chr8.3:71483899-71483918 | MS.gene07861:CDS | 40.0% | |
| TCATAGGAAGACACTTGAGA+AGG | + | chr8.3:71483686-71483705 | MS.gene07861:CDS | 40.0% | |
| TCATCGGTAGATGAAGAAGT+TGG | - | chr8.3:71483258-71483277 | None:intergenic | 40.0% | |
| TTCCATTTCCGATGCTGTTA+AGG | + | chr8.3:71483725-71483744 | MS.gene07861:CDS | 40.0% | |
| TTTCATGAGCAGAAGTCTTG+AGG | - | chr8.3:71485834-71485853 | None:intergenic | 40.0% | |
| ! | ACTTGTTCAGGTTCAGTCTA+AGG | + | chr8.3:71484391-71484410 | MS.gene07861:CDS | 40.0% |
| ! | AGTAGGAGTTAACTTGGGTA+TGG | - | chr8.3:71485748-71485767 | None:intergenic | 40.0% |
| ! | AGTATGGTGGAGTATTTGGA+AGG | + | chr8.3:71483960-71483979 | MS.gene07861:CDS | 40.0% |
| ! | ATGTCGCGTTGTATTTGTTG+TGG | + | chr8.3:71484796-71484815 | MS.gene07861:intron | 40.0% |
| ! | GGAACGGATTTGAACTTGAA+CGG | - | chr8.3:71483214-71483233 | None:intergenic | 40.0% |
| ! | GTATGGTGGAGTATTTGGAA+GGG | + | chr8.3:71483961-71483980 | MS.gene07861:CDS | 40.0% |
| ! | GTATTTCTGCTGGACATTCA+AGG | + | chr8.3:71484354-71484373 | MS.gene07861:CDS | 40.0% |
| ! | GTTTGTGTTGAAAGGCCTTT+TGG | - | chr8.3:71483360-71483379 | None:intergenic | 40.0% |
| ! | TAAGGGTGATTTGTGTTTGG+GGG | - | chr8.3:71483178-71483197 | None:intergenic | 40.0% |
| ! | TAGGAGTATGGTGGAGTATT+TGG | + | chr8.3:71483956-71483975 | MS.gene07861:CDS | 40.0% |
| ! | TCATGCTCAATTCTTGCTGT+TGG | - | chr8.3:71485883-71485902 | None:intergenic | 40.0% |
| ! | TCGAAGTATCTCAAAAGCTC+AGG | - | chr8.3:71483579-71483598 | None:intergenic | 40.0% |
| ! | TGTTCTGCCAGTTCTGTTTT+TGG | + | chr8.3:71485127-71485146 | MS.gene07861:intron | 40.0% |
| ! | TTGAACTTGAACGGTGGTTT+TGG | - | chr8.3:71483205-71483224 | None:intergenic | 40.0% |
| !! | AGGAGTATCCTGATTTGGTT+AGG | + | chr8.3:71483745-71483764 | MS.gene07861:CDS | 40.0% |
| !! | ATATCCAAGGGTATTTCTGC+TGG | + | chr8.3:71484344-71484363 | MS.gene07861:CDS | 40.0% |
| !! | ATGCCGTGTGTTTGTTTTCT+AGG | + | chr8.3:71485207-71485226 | MS.gene07861:intron | 40.0% |
| !!! | AACGGTGGTTTTGGATGATA+AGG | - | chr8.3:71483196-71483215 | None:intergenic | 40.0% |
| !!! | AATGCCGCTGTTTTTAGTGA+CGG | + | chr8.3:71483819-71483838 | MS.gene07861:CDS | 40.0% |
| !!! | ACGGTGGTTTTGGATGATAA+GGG | - | chr8.3:71483195-71483214 | None:intergenic | 40.0% |
| !!! | ATTTTGAGATTGGGAGGAAG+TGG | - | chr8.3:71483155-71483174 | None:intergenic | 40.0% |
| !!! | GTTTGGGGGATTTTGAGATT+GGG | - | chr8.3:71483164-71483183 | None:intergenic | 40.0% |
| !!! | TGGTTTTTTTGAGAAGCTGC+TGG | - | chr8.3:71483118-71483137 | None:intergenic | 40.0% |
| !!! | TGTTTGGGGGATTTTGAGAT+TGG | - | chr8.3:71483165-71483184 | None:intergenic | 40.0% |
| !!! | TTTTGAGATTGGGAGGAAGT+GGG | - | chr8.3:71483154-71483173 | None:intergenic | 40.0% |
| AACCGTGTATGAGGTGAGAT+GGG | + | chr8.3:71485063-71485082 | MS.gene07861:intron | 45.0% | |
| AACGGCGAGGAAATACAAAG+AGG | - | chr8.3:71485310-71485329 | None:intergenic | 45.0% | |
| AAGATGGCGATAAGGAAGCA+TGG | + | chr8.3:71484632-71484651 | MS.gene07861:intron | 45.0% | |
| AATTATCAGCAGGCGGATAC+GGG | + | chr8.3:71484278-71484297 | MS.gene07861:CDS | 45.0% | |
| ACGGATTTGAACTTGAACGG+TGG | - | chr8.3:71483211-71483230 | None:intergenic | 45.0% | |
| ACTCATGAGCTTGAAGCTTG+AGG | + | chr8.3:71486053-71486072 | MS.gene07861:CDS | 45.0% | |
| AGGATTAATGCGTTGGAGAC+GGG | + | chr8.3:71483900-71483919 | MS.gene07861:CDS | 45.0% | |
| AGTATTCGACCGTGCAGAAT+TGG | + | chr8.3:71484063-71484082 | MS.gene07861:CDS | 45.0% | |
| ATGGGACACTTAACACCCTT+GGG | - | chr8.3:71483861-71483880 | None:intergenic | 45.0% | |
| ATGTCCAGCAGAAATACCCT+TGG | - | chr8.3:71484351-71484370 | None:intergenic | 45.0% | |
| CAAGCTTCAAGCTCATGAGT+TGG | - | chr8.3:71486053-71486072 | None:intergenic | 45.0% | |
| CCAATCAGGTTCGGATTTGA+GGG | - | chr8.3:71483400-71483419 | None:intergenic | 45.0% | |
| CTCATGAGCTTGAAGCTTGA+GGG | + | chr8.3:71486054-71486073 | MS.gene07861:CDS | 45.0% | |
| GAATGCCTTAACCGTGTATG+AGG | + | chr8.3:71485054-71485073 | MS.gene07861:intron | 45.0% | |
| GAGGCTAGTACGTCGAAAAT+TGG | + | chr8.3:71485901-71485920 | MS.gene07861:CDS | 45.0% | |
| GAGGGCTGAGATTAAACGAA+TGG | - | chr8.3:71483382-71483401 | None:intergenic | 45.0% | |
| GTGATGAGAATGGGAAAGGT+GGG | + | chr8.3:71484093-71484112 | MS.gene07861:CDS | 45.0% | |
| TAACCGTGTATGAGGTGAGA+TGG | + | chr8.3:71485062-71485081 | MS.gene07861:intron | 45.0% | |
| TAAGAATCAGCTTCATGCCG+CGG | + | chr8.3:71484004-71484023 | MS.gene07861:CDS | 45.0% | |
| TCATGAGCTTGAAGCTTGAG+GGG | + | chr8.3:71486055-71486074 | MS.gene07861:CDS | 45.0% | |
| TCCAATCAGGTTCGGATTTG+AGG | - | chr8.3:71483401-71483420 | None:intergenic | 45.0% | |
| TCTCACCTCATACACGGTTA+AGG | - | chr8.3:71485062-71485081 | None:intergenic | 45.0% | |
| TCTTGTCGTAATCGCGGTTA+CGG | - | chr8.3:71483299-71483318 | None:intergenic | 45.0% | |
| ! | AAGTGGGTTTGATGGAGAAG+TGG | - | chr8.3:71483138-71483157 | None:intergenic | 45.0% |
| ! | ACACGGTTAAGGCATTCTCT+AGG | - | chr8.3:71485051-71485070 | None:intergenic | 45.0% |
| ! | AGATGGCGATAAGGAAGCAT+GGG | + | chr8.3:71484633-71484652 | MS.gene07861:intron | 45.0% |
| ! | CATGCACCAGAAGTGCAAAA+CGG | - | chr8.3:71485328-71485347 | None:intergenic | 45.0% |
| ! | CTCCTTAACAGCATCGGAAA+TGG | - | chr8.3:71483730-71483749 | None:intergenic | 45.0% |
| ! | GGTTTCCTGCCATCAGTTTT+TGG | + | chr8.3:71485270-71485289 | MS.gene07861:intron | 45.0% |
| ! | GTTTTGCACTTCTGGTGCAT+GGG | + | chr8.3:71485327-71485346 | MS.gene07861:intron | 45.0% |
| ! | TGATTTTCCATGCTGGTGTG+TGG | + | chr8.3:71485249-71485268 | MS.gene07861:intron | 45.0% |
| ! | TGTTCAGGTTCAGTCTAAGG+CGG | + | chr8.3:71484394-71484413 | MS.gene07861:CDS | 45.0% |
| !! | CTTTGATTGTGGCGGATGAT+AGG | + | chr8.3:71483937-71483956 | MS.gene07861:CDS | 45.0% |
| !! | GAAGTATCCTAGCGTGGTTT+TGG | + | chr8.3:71484208-71484227 | MS.gene07861:CDS | 45.0% |
| !! | TACTTGGAAGTATCCTAGCG+TGG | + | chr8.3:71484202-71484221 | MS.gene07861:CDS | 45.0% |
| !!! | AGTTCTGTTTTTGGCTGGCT+GGG | + | chr8.3:71485136-71485155 | MS.gene07861:intron | 45.0% |
| !!! | TATCCTAGCGTGGTTTTGGA+GGG | + | chr8.3:71484212-71484231 | MS.gene07861:CDS | 45.0% |
| AAACTGGGTCCGCGATTACT+TGG | + | chr8.3:71484186-71484205 | MS.gene07861:CDS | 50.0% | |
| AACAGCATCCACCGCAACAT+TGG | - | chr8.3:71483640-71483659 | None:intergenic | 50.0% | |
| ACCAAGAGAGGATTGTGTGC+TGG | + | chr8.3:71484131-71484150 | MS.gene07861:CDS | 50.0% | |
| ACCAGCACACAATCCTCTCT+TGG | - | chr8.3:71484135-71484154 | None:intergenic | 50.0% | |
| ACCGTGTATGAGGTGAGATG+GGG | + | chr8.3:71485064-71485083 | MS.gene07861:intron | 50.0% | |
| ACCTCGGAGCCAAATTCATC+GGG | - | chr8.3:71486027-71486046 | None:intergenic | 50.0% | |
| AGGAAGACACTTGAGAAGGC+TGG | + | chr8.3:71483690-71483709 | MS.gene07861:CDS | 50.0% | |
| ATTATCAGCAGGCGGATACG+GGG | + | chr8.3:71484279-71484298 | MS.gene07861:CDS | 50.0% | |
| CACCTCGGAGCCAAATTCAT+CGG | - | chr8.3:71486028-71486047 | None:intergenic | 50.0% | |
| CAGCCAGCCAAAAACAGAAC+TGG | - | chr8.3:71485137-71485156 | None:intergenic | 50.0% | |
| CATGGGACACTTAACACCCT+TGG | - | chr8.3:71483862-71483881 | None:intergenic | 50.0% | |
| CCCTCAAATCCGAACCTGAT+TGG | + | chr8.3:71483397-71483416 | MS.gene07861:CDS | 50.0% | |
| CGAGAGGACTTTGATTGTGG+CGG | + | chr8.3:71483929-71483948 | MS.gene07861:CDS | 50.0% | |
| CGAGCCGTCACTAAAAACAG+CGG | - | chr8.3:71483826-71483845 | None:intergenic | 50.0% | |
| CGCGGTTACGGAGAATTTCA+CGG | - | chr8.3:71483287-71483306 | None:intergenic | 50.0% | |
| CGTAACTAACTGCGTCGGAA+CGG | - | chr8.3:71483230-71483249 | None:intergenic | 50.0% | |
| GCAATGGCTGCTATGATCTC+TGG | + | chr8.3:71485973-71485992 | MS.gene07861:CDS | 50.0% | |
| GCAGTACAACTCAACAACCG+CGG | - | chr8.3:71484024-71484043 | None:intergenic | 50.0% | |
| GGATTAATGCGTTGGAGACG+GGG | + | chr8.3:71483901-71483920 | MS.gene07861:CDS | 50.0% | |
| GGTGATGAGAATGGGAAAGG+TGG | + | chr8.3:71484092-71484111 | MS.gene07861:CDS | 50.0% | |
| TCGTTTAGCCAATGTTGCGG+TGG | + | chr8.3:71483629-71483648 | MS.gene07861:CDS | 50.0% | |
| TGGCTGGGAGTTTCTGCTAT+GGG | + | chr8.3:71485151-71485170 | MS.gene07861:intron | 50.0% | |
| TTGAAGCTTGAGGGGTCAGT+CGG | + | chr8.3:71486063-71486082 | MS.gene07861:CDS | 50.0% | |
| ! | CGTTTTGCACTTCTGGTGCA+TGG | + | chr8.3:71485326-71485345 | MS.gene07861:intron | 50.0% |
| ! | GCGGTTGTTGAGTTGTACTG+CGG | + | chr8.3:71484023-71484042 | MS.gene07861:CDS | 50.0% |
| ! | GTTGAGTTGTACTGCGGAGA+GGG | + | chr8.3:71484029-71484048 | MS.gene07861:CDS | 50.0% |
| ! | TGTTGAGTTGTACTGCGGAG+AGG | + | chr8.3:71484028-71484047 | MS.gene07861:CDS | 50.0% |
| ! | TTGAGTTGTACTGCGGAGAG+GGG | + | chr8.3:71484030-71484049 | MS.gene07861:CDS | 50.0% |
| ! | TTGGAGGGAGATGAGAGTGT+TGG | + | chr8.3:71484227-71484246 | MS.gene07861:CDS | 50.0% |
| ! | TTGGGAGGAAGTGGGTTTGA+TGG | - | chr8.3:71483146-71483165 | None:intergenic | 50.0% |
| !! | GAGAAGCTGCTGGTTTGAGT+GGG | - | chr8.3:71483108-71483127 | None:intergenic | 50.0% |
| !! | GCTCATGAGTTGGTTCACCT+CGG | - | chr8.3:71486043-71486062 | None:intergenic | 50.0% |
| !! | GCTGGACTGATTTTCCATGC+TGG | + | chr8.3:71485242-71485261 | MS.gene07861:intron | 50.0% |
| !! | TGAGAAGCTGCTGGTTTGAG+TGG | - | chr8.3:71483109-71483128 | None:intergenic | 50.0% |
| !! | TGCTGGTTTGAGTGGGTTGT+GGG | - | chr8.3:71483101-71483120 | None:intergenic | 50.0% |
| !! | TGGGGGGTGTGTTTCTGTTT+TGG | + | chr8.3:71485082-71485101 | MS.gene07861:intron | 50.0% |
| !! | TGTGGCGGATGATAGGAGTA+TGG | + | chr8.3:71483944-71483963 | MS.gene07861:CDS | 50.0% |
| !! | TTGAGTGGGTTGTGGGTGTA+AGG | - | chr8.3:71483094-71483113 | None:intergenic | 50.0% |
| !!! | CAGTTCTGTTTTTGGCTGGC+TGG | + | chr8.3:71485135-71485154 | MS.gene07861:intron | 50.0% |
| !!! | CTGCCAGTTCTGTTTTTGGC+TGG | + | chr8.3:71485131-71485150 | MS.gene07861:intron | 50.0% |
| !!! | GTATCCTAGCGTGGTTTTGG+AGG | + | chr8.3:71484211-71484230 | MS.gene07861:CDS | 50.0% |
| !!! | TGGGGGATTTTGAGATTGGG+AGG | - | chr8.3:71483161-71483180 | None:intergenic | 50.0% |
| ACCCGCGTACCAATTCTGCA+CGG | - | chr8.3:71484075-71484094 | None:intergenic | 55.0% | |
| ACCGTGCAGAATTGGTACGC+GGG | + | chr8.3:71484071-71484090 | MS.gene07861:CDS | 55.0% | |
| CAAGATATCGTGGACCCAGG+TGG | + | chr8.3:71484163-71484182 | MS.gene07861:CDS | 55.0% | |
| CACCTGGGTCCACGATATCT+TGG | - | chr8.3:71484165-71484184 | None:intergenic | 55.0% | |
| CAGGAAACCACACACCAGCA+TGG | - | chr8.3:71485259-71485278 | None:intergenic | 55.0% | |
| CCCCCATCTCACCTCATACA+CGG | - | chr8.3:71485068-71485087 | None:intergenic | 55.0% | |
| CCGTGTATGAGGTGAGATGG+GGG | + | chr8.3:71485065-71485084 | MS.gene07861:intron | 55.0% | |
| CGTGTATGAGGTGAGATGGG+GGG | + | chr8.3:71485066-71485085 | MS.gene07861:intron | 55.0% | |
| CTGGCTGGGAGTTTCTGCTA+TGG | + | chr8.3:71485150-71485169 | MS.gene07861:intron | 55.0% | |
| GACCGTGCAGAATTGGTACG+CGG | + | chr8.3:71484070-71484089 | MS.gene07861:CDS | 55.0% | |
| GCGGGTGATGAGAATGGGAA+AGG | + | chr8.3:71484089-71484108 | MS.gene07861:CDS | 55.0% | |
| GGTACGCGGGTGATGAGAAT+GGG | + | chr8.3:71484084-71484103 | MS.gene07861:CDS | 55.0% | |
| GTCCAAGATATCGTGGACCC+AGG | + | chr8.3:71484160-71484179 | MS.gene07861:CDS | 55.0% | |
| TCTCCCTCCAAAACCACGCT+AGG | - | chr8.3:71484218-71484237 | None:intergenic | 55.0% | |
| TGAGTTGTACTGCGGAGAGG+GGG | + | chr8.3:71484031-71484050 | MS.gene07861:CDS | 55.0% | |
| TGGTACGCGGGTGATGAGAA+TGG | + | chr8.3:71484083-71484102 | MS.gene07861:CDS | 55.0% | |
| ! | ACCAGAAGTGCAAAACGGCG+AGG | - | chr8.3:71485323-71485342 | None:intergenic | 55.0% |
| ! | GCTATGGGTCTGCCGTGTTT+TGG | + | chr8.3:71485166-71485185 | MS.gene07861:intron | 55.0% |
| ! | GGCGGATGATAGGAGTATGG+TGG | + | chr8.3:71483947-71483966 | MS.gene07861:CDS | 55.0% |
| ! | TCCCGATGAATTTGGCTCCG+AGG | + | chr8.3:71486023-71486042 | MS.gene07861:CDS | 55.0% |
| !! | CTGCTGGTTTGAGTGGGTTG+TGG | - | chr8.3:71483102-71483121 | None:intergenic | 55.0% |
| !! | TCCTCGCCGTTTTGCACTTC+TGG | + | chr8.3:71485319-71485338 | MS.gene07861:intron | 55.0% |
| CGTGGACCCAGGTGGAAACT+GGG | + | chr8.3:71484171-71484190 | MS.gene07861:CDS | 60.0% | |
| TCGTGGACCCAGGTGGAAAC+TGG | + | chr8.3:71484170-71484189 | MS.gene07861:CDS | 60.0% | |
| TGGAGACGGGGCAATTCGAG+AGG | + | chr8.3:71483913-71483932 | MS.gene07861:CDS | 60.0% | |
| CGCGGACCCAGTTTCCACCT+GGG | - | chr8.3:71484180-71484199 | None:intergenic | 65.0% | |
| GTTGTACTGCGGAGAGGGGG+CGG | + | chr8.3:71484034-71484053 | MS.gene07861:CDS | 65.0% | |
| TCGCGGACCCAGTTTCCACC+TGG | - | chr8.3:71484181-71484200 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 71483060 | 71486089 | 71483060 | ID=MS.gene07861 |
| chr8.3 | mRNA | 71483060 | 71486089 | 71483060 | ID=MS.gene07861.t1;Parent=MS.gene07861 |
| chr8.3 | exon | 71483060 | 71484496 | 71483060 | ID=MS.gene07861.t1.exon1;Parent=MS.gene07861.t1 |
| chr8.3 | CDS | 71483060 | 71484496 | 71483060 | ID=cds.MS.gene07861.t1;Parent=MS.gene07861.t1 |
| chr8.3 | exon | 71485871 | 71486089 | 71485871 | ID=MS.gene07861.t1.exon2;Parent=MS.gene07861.t1 |
| chr8.3 | CDS | 71485871 | 71486089 | 71485871 | ID=cds.MS.gene07861.t1;Parent=MS.gene07861.t1 |
| Gene Sequence |
| Protein sequence |
