Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23026.t1 | XP_013450324.1 | 98.4 | 251 | 3 | 1 | 5 | 254 | 70 | 320 | 2.30E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23026.t1 | O23044 | 55.9 | 256 | 106 | 5 | 5 | 254 | 71 | 325 | 2.4e-72 | 273.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23026.t1 | G8A179 | 98.4 | 251 | 3 | 1 | 5 | 254 | 70 | 320 | 1.7e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene23026 | 0.81339 | 2.62E-51 | -1.69E-46 |
| MS.gene051158 | MS.gene23026 | 0.806533 | 7.86E-50 | -1.69E-46 |
| MS.gene051996 | MS.gene23026 | 0.830056 | 3.64E-55 | -1.69E-46 |
| MS.gene052223 | MS.gene23026 | 0.835762 | 1.39E-56 | -1.69E-46 |
| MS.gene05244 | MS.gene23026 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene23026 | 0.848604 | 5.51E-60 | -1.69E-46 |
| MS.gene054120 | MS.gene23026 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene054138 | MS.gene23026 | 0.802263 | 6.10E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene23026 | 0.819841 | 9.40E-53 | -1.69E-46 |
| MS.gene055240 | MS.gene23026 | 0.806566 | 7.73E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene23026 | 0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene23026 | 0.816028 | 6.83E-52 | -1.69E-46 |
| MS.gene056591 | MS.gene23026 | 0.814432 | 1.55E-51 | -1.69E-46 |
| MS.gene056680 | MS.gene23026 | 0.819442 | 1.16E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene23026 | 0.822263 | 2.60E-53 | -1.69E-46 |
| MS.gene056923 | MS.gene23026 | 0.816787 | 4.62E-52 | -1.69E-46 |
| MS.gene056924 | MS.gene23026 | 0.818567 | 1.83E-52 | -1.69E-46 |
| MS.gene056925 | MS.gene23026 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene23026 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene059892 | MS.gene23026 | 0.812916 | 3.33E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene23026 | 0.861185 | 1.23E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23026.t1 | MTR_7g107520 | 98.406 | 251 | 3 | 1 | 5 | 254 | 70 | 320 | 0.0 | 505 |
| MS.gene23026.t1 | MTR_4g046713 | 55.294 | 255 | 109 | 4 | 5 | 254 | 72 | 326 | 3.85e-95 | 282 |
| MS.gene23026.t1 | MTR_2g088770 | 54.297 | 256 | 110 | 5 | 5 | 254 | 71 | 325 | 7.40e-90 | 269 |
| MS.gene23026.t1 | MTR_8g075100 | 46.094 | 256 | 125 | 6 | 5 | 254 | 71 | 319 | 2.69e-73 | 226 |
| MS.gene23026.t1 | MTR_3g092990 | 48.462 | 260 | 128 | 5 | 1 | 254 | 56 | 315 | 1.41e-72 | 224 |
| MS.gene23026.t1 | MTR_3g092990 | 48.638 | 257 | 126 | 5 | 4 | 254 | 70 | 326 | 1.77e-72 | 224 |
| MS.gene23026.t1 | MTR_5g022870 | 47.876 | 259 | 116 | 9 | 5 | 254 | 68 | 316 | 6.95e-72 | 223 |
| MS.gene23026.t1 | MTR_1g038680 | 49.035 | 259 | 123 | 6 | 5 | 254 | 74 | 332 | 8.05e-72 | 223 |
| MS.gene23026.t1 | MTR_1g025980 | 45.850 | 253 | 129 | 5 | 5 | 253 | 69 | 317 | 1.14e-69 | 217 |
| MS.gene23026.t1 | MTR_1g101830 | 46.850 | 254 | 128 | 5 | 5 | 254 | 72 | 322 | 3.22e-69 | 216 |
| MS.gene23026.t1 | MTR_2g029820 | 46.693 | 257 | 130 | 5 | 5 | 254 | 74 | 330 | 9.73e-69 | 216 |
| MS.gene23026.t1 | MTR_2g029815 | 46.693 | 257 | 130 | 5 | 5 | 254 | 74 | 330 | 1.07e-68 | 216 |
| MS.gene23026.t1 | MTR_2g029830 | 45.211 | 261 | 136 | 5 | 1 | 254 | 1 | 261 | 4.20e-67 | 209 |
| MS.gene23026.t1 | MTR_2g008710 | 45.349 | 258 | 129 | 5 | 5 | 254 | 72 | 325 | 7.46e-67 | 210 |
| MS.gene23026.t1 | MTR_4g125940 | 44.402 | 259 | 133 | 5 | 5 | 254 | 18 | 274 | 3.48e-66 | 207 |
| MS.gene23026.t1 | MTR_2g029830 | 45.703 | 256 | 132 | 5 | 6 | 254 | 74 | 329 | 1.28e-65 | 208 |
| MS.gene23026.t1 | MTR_4g125940 | 44.402 | 259 | 133 | 5 | 5 | 254 | 73 | 329 | 2.92e-65 | 206 |
| MS.gene23026.t1 | MTR_2g029850 | 45.914 | 257 | 132 | 5 | 5 | 254 | 74 | 330 | 8.05e-65 | 206 |
| MS.gene23026.t1 | MTR_7g029030 | 45.312 | 256 | 129 | 6 | 5 | 254 | 70 | 320 | 9.47e-65 | 204 |
| MS.gene23026.t1 | MTR_2g029860 | 45.914 | 257 | 132 | 5 | 5 | 254 | 74 | 330 | 1.08e-64 | 205 |
| MS.gene23026.t1 | MTR_5g017860 | 46.667 | 255 | 129 | 6 | 6 | 254 | 73 | 326 | 6.47e-64 | 202 |
| MS.gene23026.t1 | MTR_1g009750 | 46.124 | 258 | 130 | 5 | 5 | 254 | 72 | 328 | 1.20e-63 | 202 |
| MS.gene23026.t1 | MTR_1g054205 | 44.358 | 257 | 135 | 6 | 6 | 254 | 70 | 326 | 1.21e-63 | 202 |
| MS.gene23026.t1 | MTR_2g029800 | 43.750 | 256 | 137 | 5 | 6 | 254 | 75 | 330 | 2.13e-63 | 202 |
| MS.gene23026.t1 | MTR_7g093370 | 44.747 | 257 | 134 | 6 | 6 | 254 | 115 | 371 | 9.78e-63 | 201 |
| MS.gene23026.t1 | MTR_2g008730 | 45.228 | 241 | 123 | 4 | 22 | 254 | 62 | 301 | 1.15e-62 | 199 |
| MS.gene23026.t1 | MTR_2g028980 | 43.580 | 257 | 138 | 5 | 5 | 254 | 74 | 330 | 1.27e-62 | 200 |
| MS.gene23026.t1 | MTR_6g027440 | 44.269 | 253 | 132 | 6 | 6 | 254 | 67 | 314 | 1.37e-62 | 199 |
| MS.gene23026.t1 | MTR_4g114210 | 41.313 | 259 | 139 | 5 | 5 | 254 | 66 | 320 | 1.64e-61 | 196 |
| MS.gene23026.t1 | MTR_4g095450 | 45.525 | 257 | 127 | 5 | 5 | 253 | 72 | 323 | 3.09e-61 | 196 |
| MS.gene23026.t1 | MTR_5g017850 | 44.706 | 255 | 134 | 7 | 6 | 254 | 73 | 326 | 3.78e-61 | 196 |
| MS.gene23026.t1 | MTR_2g029740 | 44.358 | 257 | 136 | 5 | 5 | 254 | 74 | 330 | 4.90e-61 | 196 |
| MS.gene23026.t1 | MTR_1g086320 | 42.857 | 259 | 139 | 5 | 5 | 254 | 75 | 333 | 9.05e-61 | 195 |
| MS.gene23026.t1 | MTR_5g016010 | 43.191 | 257 | 138 | 4 | 5 | 253 | 72 | 328 | 1.30e-60 | 194 |
| MS.gene23026.t1 | MTR_5g021060 | 44.922 | 256 | 135 | 5 | 5 | 254 | 75 | 330 | 1.88e-60 | 194 |
| MS.gene23026.t1 | MTR_8g062780 | 42.578 | 256 | 140 | 5 | 6 | 254 | 69 | 324 | 3.06e-60 | 193 |
| MS.gene23026.t1 | MTR_0155s0040 | 41.732 | 254 | 134 | 8 | 5 | 254 | 72 | 315 | 3.16e-60 | 193 |
| MS.gene23026.t1 | MTR_2g029560 | 43.191 | 257 | 139 | 5 | 5 | 254 | 69 | 325 | 1.15e-58 | 189 |
| MS.gene23026.t1 | MTR_1g077000 | 40.945 | 254 | 136 | 6 | 5 | 254 | 84 | 327 | 1.21e-58 | 189 |
| MS.gene23026.t1 | MTR_2g029750 | 43.969 | 257 | 137 | 5 | 5 | 254 | 74 | 330 | 3.21e-58 | 189 |
| MS.gene23026.t1 | MTR_1g086490 | 40.602 | 266 | 142 | 5 | 5 | 254 | 75 | 340 | 4.32e-58 | 188 |
| MS.gene23026.t1 | MTR_7g086820 | 40.551 | 254 | 141 | 6 | 5 | 254 | 65 | 312 | 4.62e-58 | 187 |
| MS.gene23026.t1 | MTR_2g437770 | 42.578 | 256 | 136 | 6 | 3 | 254 | 93 | 341 | 4.68e-58 | 188 |
| MS.gene23026.t1 | MTR_8g076820 | 43.750 | 256 | 138 | 5 | 5 | 254 | 75 | 330 | 7.99e-58 | 187 |
| MS.gene23026.t1 | MTR_2g029730 | 43.969 | 257 | 137 | 5 | 5 | 254 | 70 | 326 | 8.82e-58 | 187 |
| MS.gene23026.t1 | MTR_2g040000 | 43.462 | 260 | 133 | 7 | 6 | 254 | 75 | 331 | 9.49e-58 | 187 |
| MS.gene23026.t1 | MTR_3g072190 | 41.016 | 256 | 139 | 5 | 4 | 254 | 3 | 251 | 3.48e-57 | 183 |
| MS.gene23026.t1 | MTR_3g094650 | 42.460 | 252 | 131 | 6 | 6 | 250 | 74 | 318 | 4.88e-57 | 185 |
| MS.gene23026.t1 | MTR_4g127670 | 43.411 | 258 | 135 | 5 | 5 | 254 | 69 | 323 | 5.64e-57 | 184 |
| MS.gene23026.t1 | MTR_2g084080 | 41.732 | 254 | 136 | 5 | 6 | 254 | 71 | 317 | 1.26e-56 | 184 |
| MS.gene23026.t1 | MTR_3g072190 | 41.339 | 254 | 137 | 5 | 6 | 254 | 72 | 318 | 4.48e-56 | 182 |
| MS.gene23026.t1 | MTR_4g087965 | 40.310 | 258 | 144 | 7 | 5 | 252 | 87 | 344 | 1.63e-55 | 181 |
| MS.gene23026.t1 | MTR_2g084110 | 41.732 | 254 | 136 | 5 | 6 | 254 | 71 | 317 | 2.32e-55 | 180 |
| MS.gene23026.t1 | MTR_2g084090 | 41.961 | 255 | 135 | 6 | 6 | 254 | 71 | 318 | 8.12e-55 | 179 |
| MS.gene23026.t1 | MTR_4g133800 | 42.412 | 257 | 136 | 7 | 3 | 254 | 84 | 333 | 1.14e-54 | 179 |
| MS.gene23026.t1 | MTR_2g099175 | 40.310 | 258 | 141 | 6 | 6 | 254 | 82 | 335 | 1.63e-54 | 179 |
| MS.gene23026.t1 | MTR_2g084010 | 42.745 | 255 | 133 | 5 | 6 | 254 | 71 | 318 | 2.74e-54 | 177 |
| MS.gene23026.t1 | MTR_1g009750 | 42.188 | 256 | 126 | 5 | 5 | 254 | 72 | 311 | 3.68e-54 | 177 |
| MS.gene23026.t1 | MTR_2g084020 | 41.961 | 255 | 135 | 5 | 6 | 254 | 71 | 318 | 1.37e-53 | 176 |
| MS.gene23026.t1 | MTR_4g122640 | 42.969 | 256 | 136 | 7 | 6 | 254 | 84 | 336 | 1.40e-53 | 176 |
| MS.gene23026.t1 | MTR_7g086870 | 38.976 | 254 | 142 | 6 | 5 | 254 | 67 | 311 | 4.90e-53 | 174 |
| MS.gene23026.t1 | MTR_1g115900 | 41.085 | 258 | 136 | 7 | 5 | 254 | 72 | 321 | 7.13e-53 | 174 |
| MS.gene23026.t1 | MTR_1g090760 | 40.310 | 258 | 144 | 7 | 6 | 254 | 74 | 330 | 7.81e-53 | 174 |
| MS.gene23026.t1 | MTR_2g029910 | 41.473 | 258 | 143 | 6 | 5 | 254 | 75 | 332 | 1.63e-52 | 174 |
| MS.gene23026.t1 | MTR_4g083710 | 40.154 | 259 | 140 | 6 | 5 | 254 | 72 | 324 | 2.99e-52 | 172 |
| MS.gene23026.t1 | MTR_7g072510 | 39.608 | 255 | 142 | 5 | 5 | 254 | 65 | 312 | 2.11e-51 | 170 |
| MS.gene23026.t1 | MTR_4g030890 | 39.370 | 254 | 146 | 6 | 6 | 254 | 146 | 396 | 2.80e-51 | 172 |
| MS.gene23026.t1 | MTR_1g022970 | 42.023 | 257 | 142 | 5 | 5 | 254 | 91 | 347 | 3.07e-51 | 171 |
| MS.gene23026.t1 | MTR_2g084000 | 40.392 | 255 | 139 | 5 | 6 | 254 | 72 | 319 | 3.97e-51 | 169 |
| MS.gene23026.t1 | MTR_5g014100 | 41.538 | 260 | 141 | 6 | 6 | 254 | 72 | 331 | 1.25e-50 | 169 |
| MS.gene23026.t1 | MTR_5g083860 | 39.453 | 256 | 141 | 6 | 6 | 254 | 77 | 325 | 2.81e-50 | 167 |
| MS.gene23026.t1 | MTR_6g043460 | 38.281 | 256 | 144 | 7 | 5 | 254 | 81 | 328 | 3.14e-50 | 168 |
| MS.gene23026.t1 | MTR_6g043240 | 41.016 | 256 | 134 | 8 | 5 | 254 | 87 | 331 | 5.42e-50 | 167 |
| MS.gene23026.t1 | MTR_7g107500 | 91.765 | 85 | 7 | 0 | 170 | 254 | 13 | 97 | 5.45e-50 | 159 |
| MS.gene23026.t1 | MTR_4g029190 | 39.689 | 257 | 141 | 6 | 5 | 254 | 91 | 340 | 1.26e-49 | 166 |
| MS.gene23026.t1 | MTR_7g026990 | 40.467 | 257 | 136 | 7 | 5 | 254 | 76 | 322 | 1.80e-49 | 165 |
| MS.gene23026.t1 | MTR_6g043280 | 39.216 | 255 | 140 | 8 | 6 | 254 | 87 | 332 | 3.26e-49 | 165 |
| MS.gene23026.t1 | MTR_4g029180 | 38.672 | 256 | 143 | 6 | 6 | 254 | 73 | 321 | 1.00e-48 | 163 |
| MS.gene23026.t1 | MTR_4g029170 | 39.062 | 256 | 142 | 6 | 6 | 254 | 73 | 321 | 1.34e-48 | 163 |
| MS.gene23026.t1 | MTR_5g074970 | 38.760 | 258 | 142 | 7 | 6 | 254 | 76 | 326 | 1.76e-48 | 163 |
| MS.gene23026.t1 | MTR_0286s0010 | 40.078 | 257 | 143 | 7 | 6 | 254 | 81 | 334 | 2.86e-48 | 162 |
| MS.gene23026.t1 | MTR_6g008075 | 40.078 | 257 | 143 | 7 | 6 | 254 | 81 | 334 | 2.86e-48 | 162 |
| MS.gene23026.t1 | MTR_3g094670 | 40.873 | 252 | 135 | 6 | 6 | 250 | 74 | 318 | 3.12e-48 | 162 |
| MS.gene23026.t1 | MTR_4g074995 | 39.313 | 262 | 125 | 8 | 5 | 254 | 69 | 308 | 5.00e-48 | 161 |
| MS.gene23026.t1 | MTR_4g029200 | 38.039 | 255 | 146 | 5 | 5 | 254 | 91 | 338 | 2.18e-47 | 160 |
| MS.gene23026.t1 | MTR_4g031140 | 37.008 | 254 | 152 | 6 | 6 | 254 | 74 | 324 | 2.18e-47 | 160 |
| MS.gene23026.t1 | MTR_5g074710 | 41.538 | 260 | 132 | 9 | 6 | 254 | 71 | 321 | 2.64e-47 | 160 |
| MS.gene23026.t1 | MTR_2g008160 | 39.615 | 260 | 142 | 7 | 5 | 254 | 69 | 323 | 5.34e-47 | 159 |
| MS.gene23026.t1 | MTR_7g072480 | 38.431 | 255 | 145 | 5 | 5 | 254 | 69 | 316 | 8.00e-47 | 158 |
| MS.gene23026.t1 | MTR_3g094630 | 41.016 | 256 | 137 | 6 | 6 | 254 | 74 | 322 | 2.14e-46 | 157 |
| MS.gene23026.t1 | MTR_3g466180 | 39.370 | 254 | 142 | 5 | 6 | 254 | 77 | 323 | 1.03e-45 | 155 |
| MS.gene23026.t1 | MTR_3g105790 | 41.245 | 257 | 140 | 6 | 5 | 254 | 70 | 322 | 1.11e-45 | 155 |
| MS.gene23026.t1 | MTR_5g074860 | 40.000 | 260 | 134 | 10 | 6 | 253 | 75 | 324 | 3.31e-45 | 154 |
| MS.gene23026.t1 | MTR_5g074760 | 40.769 | 260 | 134 | 10 | 6 | 254 | 71 | 321 | 5.39e-45 | 154 |
| MS.gene23026.t1 | MTR_0147s0010 | 37.751 | 249 | 132 | 4 | 28 | 253 | 133 | 381 | 7.70e-45 | 155 |
| MS.gene23026.t1 | MTR_3g466200 | 36.576 | 257 | 148 | 7 | 6 | 254 | 71 | 320 | 1.71e-44 | 152 |
| MS.gene23026.t1 | MTR_5g074740 | 40.840 | 262 | 131 | 11 | 6 | 254 | 71 | 321 | 1.82e-44 | 152 |
| MS.gene23026.t1 | MTR_2g067440 | 35.336 | 283 | 148 | 7 | 5 | 253 | 105 | 386 | 5.85e-44 | 152 |
| MS.gene23026.t1 | MTR_2g077990 | 34.507 | 284 | 148 | 7 | 5 | 251 | 121 | 403 | 1.97e-43 | 152 |
| MS.gene23026.t1 | MTR_5g049280 | 35.878 | 262 | 154 | 10 | 5 | 254 | 78 | 337 | 3.54e-43 | 149 |
| MS.gene23026.t1 | MTR_2g078610 | 34.859 | 284 | 147 | 7 | 5 | 251 | 121 | 403 | 5.52e-43 | 150 |
| MS.gene23026.t1 | MTR_4g074990 | 37.931 | 261 | 127 | 7 | 5 | 254 | 69 | 305 | 6.03e-43 | 148 |
| MS.gene23026.t1 | MTR_3g105790 | 40.984 | 244 | 136 | 5 | 18 | 254 | 4 | 246 | 1.84e-42 | 145 |
| MS.gene23026.t1 | MTR_3g467600 | 38.996 | 259 | 141 | 8 | 6 | 254 | 73 | 324 | 2.87e-42 | 147 |
| MS.gene23026.t1 | MTR_4g132490 | 35.409 | 257 | 156 | 7 | 5 | 254 | 74 | 327 | 6.20e-42 | 146 |
| MS.gene23026.t1 | MTR_1g066380 | 34.470 | 264 | 153 | 8 | 2 | 254 | 1 | 255 | 6.45e-42 | 144 |
| MS.gene23026.t1 | MTR_4g132110 | 36.398 | 261 | 150 | 8 | 3 | 254 | 75 | 328 | 1.58e-41 | 145 |
| MS.gene23026.t1 | MTR_4g132110 | 35.714 | 266 | 150 | 8 | 3 | 254 | 75 | 333 | 1.21e-40 | 143 |
| MS.gene23026.t1 | MTR_5g033470 | 35.115 | 262 | 154 | 9 | 6 | 254 | 119 | 377 | 2.51e-40 | 143 |
| MS.gene23026.t1 | MTR_1g066380 | 34.483 | 261 | 151 | 8 | 5 | 254 | 72 | 323 | 4.96e-40 | 141 |
| MS.gene23026.t1 | MTR_1g066710 | 35.632 | 261 | 148 | 8 | 5 | 254 | 72 | 323 | 1.31e-39 | 140 |
| MS.gene23026.t1 | MTR_2g078280 | 34.432 | 273 | 141 | 7 | 5 | 240 | 121 | 392 | 5.02e-39 | 140 |
| MS.gene23026.t1 | MTR_1g066640 | 34.363 | 259 | 150 | 8 | 7 | 254 | 74 | 323 | 8.94e-39 | 137 |
| MS.gene23026.t1 | MTR_2g029880 | 42.857 | 189 | 95 | 4 | 69 | 254 | 10 | 188 | 4.01e-38 | 133 |
| MS.gene23026.t1 | MTR_4g074980 | 36.471 | 255 | 127 | 8 | 5 | 254 | 70 | 294 | 1.66e-37 | 133 |
| MS.gene23026.t1 | MTR_2g067450 | 35.798 | 257 | 155 | 6 | 5 | 253 | 55 | 309 | 4.74e-37 | 133 |
| MS.gene23026.t1 | MTR_1g066680 | 32.812 | 256 | 160 | 5 | 6 | 254 | 72 | 322 | 4.37e-36 | 130 |
| MS.gene23026.t1 | MTR_4g074980 | 37.824 | 193 | 101 | 5 | 5 | 187 | 70 | 253 | 7.44e-33 | 120 |
| MS.gene23026.t1 | MTR_2g008160 | 34.615 | 260 | 120 | 7 | 5 | 254 | 69 | 288 | 9.77e-33 | 121 |
| MS.gene23026.t1 | MTR_5g074700 | 36.681 | 229 | 116 | 10 | 34 | 254 | 7 | 214 | 1.80e-31 | 115 |
| MS.gene23026.t1 | MTR_3g072210 | 36.508 | 189 | 110 | 4 | 69 | 254 | 57 | 238 | 1.25e-30 | 114 |
| MS.gene23026.t1 | MTR_2g008160 | 48.062 | 129 | 59 | 5 | 5 | 129 | 69 | 193 | 1.50e-26 | 102 |
| MS.gene23026.t1 | MTR_2g077980 | 27.465 | 284 | 159 | 8 | 12 | 251 | 1 | 281 | 5.45e-26 | 103 |
| MS.gene23026.t1 | MTR_5g074860 | 32.692 | 260 | 114 | 11 | 6 | 253 | 75 | 285 | 2.18e-24 | 99.0 |
| MS.gene23026.t1 | MTR_7g086790 | 34.021 | 194 | 104 | 5 | 7 | 197 | 17 | 189 | 4.54e-23 | 93.2 |
| MS.gene23026.t1 | MTR_5g058120 | 33.540 | 161 | 95 | 3 | 91 | 250 | 6 | 155 | 5.94e-23 | 94.4 |
| MS.gene23026.t1 | MTR_7g072490 | 32.479 | 234 | 92 | 7 | 6 | 234 | 2 | 174 | 1.18e-22 | 92.4 |
| MS.gene23026.t1 | MTR_2g078560 | 28.837 | 215 | 121 | 3 | 69 | 251 | 103 | 317 | 1.02e-21 | 92.4 |
| MS.gene23026.t1 | MTR_1g089005 | 75.000 | 56 | 13 | 1 | 10 | 64 | 71 | 126 | 4.82e-19 | 81.6 |
| MS.gene23026.t1 | MTR_6g048160 | 62.295 | 61 | 19 | 2 | 5 | 64 | 28 | 85 | 5.80e-17 | 74.3 |
| MS.gene23026.t1 | MTR_1g098320 | 50.000 | 78 | 38 | 1 | 178 | 254 | 47 | 124 | 3.90e-16 | 73.6 |
| MS.gene23026.t1 | MTR_6g071110 | 43.529 | 85 | 37 | 3 | 26 | 109 | 80 | 154 | 4.30e-13 | 65.9 |
| MS.gene23026.t1 | MTR_3g072260 | 57.377 | 61 | 24 | 2 | 6 | 64 | 72 | 132 | 1.23e-12 | 63.9 |
| MS.gene23026.t1 | MTR_4g114220 | 41.000 | 100 | 37 | 5 | 5 | 95 | 48 | 134 | 7.91e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23026.t1 | AT1G05260 | 55.859 | 256 | 106 | 5 | 5 | 254 | 71 | 325 | 1.44e-94 | 281 |
| MS.gene23026.t1 | AT4G11290 | 55.253 | 257 | 108 | 5 | 5 | 254 | 70 | 326 | 1.12e-90 | 271 |
| MS.gene23026.t1 | AT5G15180 | 52.941 | 255 | 113 | 5 | 5 | 254 | 77 | 329 | 5.59e-87 | 261 |
| MS.gene23026.t1 | AT2G39040 | 51.538 | 260 | 116 | 5 | 5 | 254 | 91 | 350 | 1.60e-84 | 256 |
| MS.gene23026.t1 | AT3G21770 | 52.157 | 255 | 115 | 5 | 5 | 253 | 74 | 327 | 2.22e-84 | 255 |
| MS.gene23026.t1 | AT3G01190 | 53.725 | 255 | 109 | 6 | 5 | 254 | 71 | 321 | 3.25e-84 | 254 |
| MS.gene23026.t1 | AT1G05240 | 49.805 | 257 | 120 | 5 | 5 | 254 | 71 | 325 | 1.08e-83 | 253 |
| MS.gene23026.t1 | AT1G05250 | 49.805 | 257 | 120 | 5 | 5 | 254 | 71 | 325 | 1.08e-83 | 253 |
| MS.gene23026.t1 | AT5G42180 | 45.455 | 253 | 130 | 5 | 5 | 253 | 68 | 316 | 2.27e-69 | 216 |
| MS.gene23026.t1 | AT5G64120 | 45.669 | 254 | 129 | 6 | 5 | 254 | 80 | 328 | 9.59e-67 | 210 |
| MS.gene23026.t1 | AT2G24800 | 48.062 | 258 | 122 | 7 | 5 | 254 | 76 | 329 | 6.77e-65 | 205 |
| MS.gene23026.t1 | AT5G51890 | 45.098 | 255 | 132 | 6 | 5 | 254 | 71 | 322 | 1.71e-64 | 204 |
| MS.gene23026.t1 | AT5G14130 | 45.703 | 256 | 131 | 6 | 5 | 254 | 77 | 330 | 1.72e-63 | 202 |
| MS.gene23026.t1 | AT5G14130 | 45.703 | 256 | 131 | 6 | 5 | 254 | 118 | 371 | 5.26e-63 | 202 |
| MS.gene23026.t1 | AT2G41480 | 41.699 | 259 | 138 | 5 | 5 | 254 | 74 | 328 | 9.57e-63 | 199 |
| MS.gene23026.t1 | AT5G64100 | 43.191 | 257 | 132 | 6 | 5 | 254 | 82 | 331 | 1.55e-62 | 199 |
| MS.gene23026.t1 | AT5G06720 | 43.750 | 256 | 137 | 5 | 6 | 254 | 78 | 333 | 1.81e-62 | 199 |
| MS.gene23026.t1 | AT5G19890 | 44.186 | 258 | 129 | 7 | 6 | 254 | 76 | 327 | 4.25e-62 | 198 |
| MS.gene23026.t1 | AT5G17820 | 41.732 | 254 | 135 | 6 | 5 | 254 | 69 | 313 | 7.62e-62 | 197 |
| MS.gene23026.t1 | AT4G31760 | 45.525 | 257 | 129 | 6 | 5 | 254 | 74 | 326 | 9.03e-62 | 197 |
| MS.gene23026.t1 | AT1G71695 | 44.358 | 257 | 130 | 7 | 5 | 254 | 89 | 339 | 2.95e-61 | 197 |
| MS.gene23026.t1 | AT4G37530 | 43.629 | 259 | 134 | 5 | 6 | 254 | 73 | 329 | 6.63e-61 | 195 |
| MS.gene23026.t1 | AT4G33420 | 42.126 | 254 | 133 | 6 | 5 | 254 | 82 | 325 | 9.24e-61 | 194 |
| MS.gene23026.t1 | AT2G18140 | 41.406 | 256 | 144 | 5 | 5 | 254 | 80 | 335 | 1.35e-60 | 194 |
| MS.gene23026.t1 | AT5G17820 | 41.732 | 254 | 135 | 6 | 5 | 254 | 122 | 366 | 1.41e-60 | 195 |
| MS.gene23026.t1 | AT5G64110 | 43.580 | 257 | 133 | 5 | 5 | 254 | 79 | 330 | 1.78e-60 | 194 |
| MS.gene23026.t1 | AT5G06730 | 44.141 | 256 | 136 | 5 | 6 | 254 | 79 | 334 | 1.98e-60 | 194 |
| MS.gene23026.t1 | AT2G18150 | 42.188 | 256 | 142 | 5 | 5 | 254 | 81 | 336 | 2.90e-60 | 194 |
| MS.gene23026.t1 | AT4G33420 | 42.126 | 254 | 133 | 6 | 5 | 254 | 129 | 372 | 2.95e-60 | 194 |
| MS.gene23026.t1 | AT5G19880 | 43.629 | 259 | 136 | 7 | 6 | 254 | 71 | 329 | 3.89e-60 | 193 |
| MS.gene23026.t1 | AT4G36430 | 41.797 | 256 | 143 | 5 | 5 | 254 | 75 | 330 | 5.26e-60 | 192 |
| MS.gene23026.t1 | AT5G67400 | 43.580 | 257 | 137 | 5 | 6 | 254 | 73 | 329 | 6.18e-60 | 192 |
| MS.gene23026.t1 | AT3G49960 | 44.358 | 257 | 135 | 5 | 6 | 254 | 73 | 329 | 1.84e-59 | 191 |
| MS.gene23026.t1 | AT5G39580 | 42.745 | 255 | 136 | 7 | 5 | 254 | 70 | 319 | 2.27e-59 | 191 |
| MS.gene23026.t1 | AT3G03670 | 39.764 | 254 | 149 | 3 | 5 | 254 | 68 | 321 | 1.07e-58 | 189 |
| MS.gene23026.t1 | AT2G38390 | 44.186 | 258 | 136 | 6 | 5 | 254 | 76 | 333 | 1.34e-58 | 189 |
| MS.gene23026.t1 | AT5G66390 | 43.969 | 257 | 136 | 6 | 5 | 254 | 78 | 333 | 3.11e-58 | 188 |
| MS.gene23026.t1 | AT4G37520 | 42.412 | 257 | 140 | 5 | 6 | 254 | 73 | 329 | 3.63e-58 | 188 |
| MS.gene23026.t1 | AT4G37520 | 42.745 | 255 | 139 | 5 | 6 | 254 | 73 | 326 | 3.77e-58 | 188 |
| MS.gene23026.t1 | AT2G38380 | 44.186 | 258 | 136 | 6 | 5 | 254 | 76 | 333 | 8.27e-58 | 187 |
| MS.gene23026.t1 | AT2G18980 | 42.636 | 258 | 136 | 5 | 5 | 254 | 70 | 323 | 1.55e-57 | 186 |
| MS.gene23026.t1 | AT4G30170 | 41.860 | 258 | 138 | 6 | 5 | 254 | 72 | 325 | 6.73e-57 | 184 |
| MS.gene23026.t1 | AT1G14550 | 41.313 | 259 | 135 | 7 | 5 | 254 | 71 | 321 | 7.49e-57 | 184 |
| MS.gene23026.t1 | AT3G32980 | 42.471 | 259 | 138 | 6 | 6 | 254 | 77 | 334 | 8.73e-57 | 185 |
| MS.gene23026.t1 | AT4G08770 | 41.085 | 258 | 143 | 6 | 6 | 254 | 70 | 327 | 5.57e-56 | 183 |
| MS.gene23026.t1 | AT5G22410 | 39.130 | 253 | 141 | 6 | 6 | 250 | 74 | 321 | 8.99e-56 | 182 |
| MS.gene23026.t1 | AT3G50990 | 41.961 | 255 | 142 | 4 | 6 | 254 | 87 | 341 | 1.62e-55 | 181 |
| MS.gene23026.t1 | AT1G44970 | 43.969 | 257 | 137 | 5 | 5 | 254 | 90 | 346 | 9.19e-55 | 180 |
| MS.gene23026.t1 | AT1G49570 | 42.292 | 253 | 138 | 6 | 6 | 250 | 94 | 346 | 7.89e-54 | 177 |
| MS.gene23026.t1 | AT5G24070 | 39.535 | 258 | 142 | 6 | 6 | 254 | 83 | 335 | 1.19e-53 | 177 |
| MS.gene23026.t1 | AT4G33870 | 37.413 | 286 | 140 | 6 | 5 | 251 | 113 | 398 | 5.54e-53 | 177 |
| MS.gene23026.t1 | AT4G17690 | 40.310 | 258 | 140 | 7 | 5 | 254 | 71 | 322 | 2.58e-52 | 173 |
| MS.gene23026.t1 | AT3G28200 | 41.016 | 256 | 138 | 6 | 6 | 254 | 67 | 316 | 2.83e-52 | 172 |
| MS.gene23026.t1 | AT4G26010 | 38.824 | 255 | 139 | 7 | 5 | 254 | 67 | 309 | 4.27e-52 | 172 |
| MS.gene23026.t1 | AT3G49110 | 39.922 | 258 | 146 | 5 | 6 | 254 | 79 | 336 | 5.11e-52 | 173 |
| MS.gene23026.t1 | AT4G26010 | 38.824 | 255 | 139 | 7 | 5 | 254 | 95 | 337 | 6.31e-52 | 172 |
| MS.gene23026.t1 | AT5G05340 | 38.672 | 256 | 143 | 6 | 6 | 254 | 76 | 324 | 6.93e-52 | 172 |
| MS.gene23026.t1 | AT2G22420 | 38.976 | 254 | 147 | 6 | 6 | 254 | 69 | 319 | 2.16e-51 | 171 |
| MS.gene23026.t1 | AT1G14540 | 39.216 | 255 | 143 | 5 | 6 | 254 | 67 | 315 | 2.34e-51 | 170 |
| MS.gene23026.t1 | AT2G35380 | 41.154 | 260 | 142 | 6 | 6 | 254 | 76 | 335 | 4.36e-51 | 170 |
| MS.gene23026.t1 | AT3G49120 | 39.922 | 258 | 146 | 5 | 6 | 254 | 78 | 335 | 5.72e-51 | 170 |
| MS.gene23026.t1 | AT2G43480 | 37.984 | 258 | 146 | 6 | 6 | 254 | 83 | 335 | 6.05e-51 | 169 |
| MS.gene23026.t1 | AT1G77100 | 38.610 | 259 | 142 | 7 | 5 | 254 | 69 | 319 | 9.50e-51 | 169 |
| MS.gene23026.t1 | AT5G40150 | 40.467 | 257 | 139 | 7 | 6 | 254 | 78 | 328 | 1.13e-50 | 169 |
| MS.gene23026.t1 | AT4G37530 | 45.933 | 209 | 102 | 4 | 6 | 205 | 73 | 279 | 1.38e-50 | 167 |
| MS.gene23026.t1 | AT1G30870 | 38.372 | 258 | 141 | 8 | 6 | 254 | 97 | 345 | 2.93e-50 | 168 |
| MS.gene23026.t1 | AT4G25980 | 38.224 | 259 | 148 | 6 | 5 | 254 | 71 | 326 | 3.66e-50 | 167 |
| MS.gene23026.t1 | AT4G08780 | 38.760 | 258 | 149 | 5 | 6 | 254 | 70 | 327 | 6.21e-50 | 167 |
| MS.gene23026.t1 | AT2G34060 | 39.535 | 258 | 146 | 7 | 5 | 252 | 87 | 344 | 1.14e-48 | 164 |
| MS.gene23026.t1 | AT5G47000 | 37.354 | 257 | 150 | 6 | 5 | 254 | 78 | 330 | 7.35e-48 | 161 |
| MS.gene23026.t1 | AT1G68850 | 38.577 | 267 | 141 | 10 | 5 | 254 | 75 | 335 | 1.31e-46 | 158 |
| MS.gene23026.t1 | AT4G16270 | 38.431 | 255 | 149 | 6 | 6 | 254 | 96 | 348 | 1.42e-46 | 159 |
| MS.gene23026.t1 | AT1G34510 | 36.863 | 255 | 144 | 7 | 5 | 254 | 67 | 309 | 2.90e-46 | 157 |
| MS.gene23026.t1 | AT2G35380 | 40.408 | 245 | 135 | 6 | 21 | 254 | 3 | 247 | 3.29e-46 | 155 |
| MS.gene23026.t1 | AT1G24110 | 39.147 | 258 | 145 | 7 | 6 | 254 | 68 | 322 | 4.22e-45 | 154 |
| MS.gene23026.t1 | AT5G58390 | 37.354 | 257 | 146 | 7 | 6 | 254 | 67 | 316 | 6.70e-45 | 153 |
| MS.gene23026.t1 | AT4G21960 | 36.293 | 259 | 153 | 6 | 3 | 254 | 74 | 327 | 2.10e-43 | 150 |
| MS.gene23026.t1 | AT5G58400 | 37.008 | 254 | 143 | 8 | 6 | 250 | 76 | 321 | 7.53e-41 | 143 |
| MS.gene23026.t1 | AT2G37130 | 34.351 | 262 | 151 | 9 | 5 | 254 | 44 | 296 | 3.43e-37 | 133 |
| MS.gene23026.t1 | AT2G37130 | 34.351 | 262 | 151 | 9 | 5 | 254 | 75 | 327 | 6.23e-37 | 133 |
| MS.gene23026.t1 | AT3G17070 | 33.333 | 261 | 159 | 9 | 5 | 254 | 83 | 339 | 4.14e-34 | 125 |
| MS.gene23026.t1 | AT3G17070 | 32.824 | 262 | 161 | 9 | 4 | 254 | 19 | 276 | 6.22e-34 | 124 |
| MS.gene23026.t1 | AT5G39580 | 46.341 | 123 | 59 | 4 | 5 | 124 | 70 | 188 | 9.35e-25 | 99.0 |
| MS.gene23026.t1 | AT2G24800 | 50.000 | 120 | 54 | 3 | 5 | 121 | 76 | 192 | 1.14e-24 | 99.0 |
| MS.gene23026.t1 | AT4G25980 | 43.443 | 122 | 63 | 4 | 5 | 123 | 116 | 234 | 9.90e-22 | 92.0 |
Find 52 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATCTATGGTTGCATTTC+AGG | 0.088309 | 7.2:+6913655 | None:intergenic |
| CAATTCATTAACAATGTTTC+TGG | 0.127160 | 7.2:-6914663 | None:intergenic |
| TCAAATGTTGTTGAGCTATT+TGG | 0.173041 | 7.2:-6914563 | None:intergenic |
| CATGACTTGGTTGTATTATC+AGG | 0.226559 | 7.2:+6914093 | MS.gene23026:CDS |
| GTCTGAGCTGTGTGATATTA+TGG | 0.266226 | 7.2:-6914041 | None:intergenic |
| AGTTTAAGAATAAACCAAAT+TGG | 0.267577 | 7.2:+6913944 | MS.gene23026:intron |
| CCCGTAAGCACTTCCCAATT+TGG | 0.267771 | 7.2:-6913958 | None:intergenic |
| AAGCCTGCTAATGATAAATT+AGG | 0.273981 | 7.2:-6913740 | None:intergenic |
| CAGAAACATTGTTAATGAAT+TGG | 0.289764 | 7.2:+6914664 | MS.gene23026:CDS |
| GTCACTTAGGCCTTGGCATT+TGG | 0.297824 | 7.2:-6914516 | None:intergenic |
| TTCAAGAAATTTGCATAAGT+TGG | 0.318870 | 7.2:-6914491 | None:intergenic |
| ACCAAATTGGGAAGTGCTTA+CGG | 0.361617 | 7.2:+6913957 | MS.gene23026:CDS |
| TCAGCACATGATACAATTCC+TGG | 0.383508 | 7.2:-6913803 | None:intergenic |
| GTTTGAATGGAGAAATTAGA+AGG | 0.402528 | 7.2:+6914759 | MS.gene23026:CDS |
| TTTATAGGAGCACACACAAT+TGG | 0.421672 | 7.2:+6914392 | MS.gene23026:intron |
| GATAGAAGACATAAAAGCTT+TGG | 0.424869 | 7.2:+6913769 | MS.gene23026:CDS |
| ATTGCAACTTATTCAGCAAC+AGG | 0.429672 | 7.2:+6914423 | MS.gene23026:CDS |
| CCAAATTGGGAAGTGCTTAC+GGG | 0.431778 | 7.2:+6913958 | MS.gene23026:CDS |
| ATTCCTAATTTATCATTAGC+AGG | 0.434054 | 7.2:+6913737 | MS.gene23026:CDS |
| GTTTAAGAATAAACCAAATT+GGG | 0.443819 | 7.2:+6913945 | MS.gene23026:intron |
| ATATCTATGGTTGCATTTCA+GGG | 0.448481 | 7.2:+6913656 | None:intergenic |
| GAGGTCCTCACTGGTTTGAA+TGG | 0.449923 | 7.2:+6914746 | MS.gene23026:CDS |
| AAGGTGCTGGAATATTGATC+AGG | 0.461887 | 7.2:-6914017 | None:intergenic |
| AACAATGTTTCTGGATTGCT+TGG | 0.462159 | 7.2:-6914654 | None:intergenic |
| TGGTGGTGTCACTTAGGCCT+TGG | 0.470093 | 7.2:-6914523 | None:intergenic |
| AAAGCTTACTCTTCATGACT+TGG | 0.493798 | 7.2:+6914080 | MS.gene23026:CDS |
| CTGTTGTGGTGGTGTCACTT+AGG | 0.496811 | 7.2:-6914529 | None:intergenic |
| GAAGAGGATGGGAGCTATTG+AGG | 0.498561 | 7.2:+6914727 | MS.gene23026:CDS |
| GGAGCTATTGAGGTCCTCAC+TGG | 0.501455 | 7.2:+6914737 | MS.gene23026:CDS |
| CTCCGCAGTGTTACCAGCAG+TGG | 0.514254 | 7.2:-6913705 | None:intergenic |
| TTCTCAGTCAATGAAGAGGA+TGG | 0.515611 | 7.2:+6914715 | MS.gene23026:CDS |
| GCATAAGTTGGATTCAGAGA+TGG | 0.521194 | 7.2:-6914479 | None:intergenic |
| AGAAGACATAAAAGCTTTGG+AGG | 0.524673 | 7.2:+6913772 | MS.gene23026:CDS |
| ATTTCAGGGGTGTGACGCAT+CGG | 0.528033 | 7.2:+6913670 | MS.gene23026:CDS |
| TCCTGTCCTTCTACAAAACA+AGG | 0.528441 | 7.2:+6914598 | MS.gene23026:CDS |
| TGGATCCATCTCTACTGTTG+TGG | 0.535692 | 7.2:-6914543 | None:intergenic |
| CACCACCACAACAGTAGAGA+TGG | 0.539448 | 7.2:+6914538 | MS.gene23026:CDS |
| CTTCATTGACTGAGAAAACT+CGG | 0.554984 | 7.2:-6914708 | None:intergenic |
| TATCTATGGTTGCATTTCAG+GGG | 0.566988 | 7.2:+6913657 | None:intergenic |
| GTGATATTATGGAAAGGTGC+TGG | 0.567497 | 7.2:-6914030 | None:intergenic |
| ATCCATCTCTACTGTTGTGG+TGG | 0.572153 | 7.2:-6914540 | None:intergenic |
| TCTCAGTCAATGAAGAGGAT+GGG | 0.577113 | 7.2:+6914716 | MS.gene23026:CDS |
| TGCTAATGATAAATTAGGAA+TGG | 0.579765 | 7.2:-6913735 | None:intergenic |
| GTGCTTACGGGTAGAAGAGA+TGG | 0.590073 | 7.2:+6913970 | MS.gene23026:CDS |
| TTCTTGAAGACCAAATGCCA+AGG | 0.601738 | 7.2:+6914506 | MS.gene23026:CDS |
| AGGTGCTGGAATATTGATCA+GGG | 0.633257 | 7.2:-6914016 | None:intergenic |
| GGAGCACACACAATTGGAGT+AGG | 0.649757 | 7.2:+6914398 | MS.gene23026:intron |
| ATGTGCTGATATACTCACAT+TGG | 0.669867 | 7.2:+6913817 | MS.gene23026:CDS |
| CCTGTCCTTCTACAAAACAA+GGG | 0.678901 | 7.2:+6914599 | MS.gene23026:CDS |
| AGCTGTGTGATATTATGGAA+AGG | 0.714907 | 7.2:-6914036 | None:intergenic |
| TTTCTCCATTCAAACCAGTG+AGG | 0.718240 | 7.2:-6914751 | None:intergenic |
| GTCCACTGCTGGTAACACTG+CGG | 0.786302 | 7.2:+6913703 | MS.gene23026:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATGTATAAATTAA+TGG | - | chr7.2:6913882-6913901 | None:intergenic | 10.0% |
| !! | TAAATATGAATGAATAAATC+AGG | - | chr7.2:6913917-6913936 | None:intergenic | 15.0% |
| !! | AACTAGTTAAATTAACATGT+TGG | + | chr7.2:6914360-6914379 | MS.gene23026:intron | 20.0% |
| !! | AGTTTAAGAATAAACCAAAT+TGG | + | chr7.2:6913944-6913963 | MS.gene23026:intron | 20.0% |
| !! | GTTTAAGAATAAACCAAATT+GGG | + | chr7.2:6913945-6913964 | MS.gene23026:intron | 20.0% |
| !! | TATAAATTGGTTAATTAGCA+TGG | - | chr7.2:6914215-6914234 | None:intergenic | 20.0% |
| ! | ATTCCTAATTTATCATTAGC+AGG | + | chr7.2:6913737-6913756 | MS.gene23026:CDS | 25.0% |
| ! | CAATTCATTAACAATGTTTC+TGG | - | chr7.2:6914666-6914685 | None:intergenic | 25.0% |
| ! | CAGAAACATTGTTAATGAAT+TGG | + | chr7.2:6914664-6914683 | MS.gene23026:CDS | 25.0% |
| ! | CCAATTTATATTAAGTAGCA+CGG | + | chr7.2:6914225-6914244 | MS.gene23026:intron | 25.0% |
| ! | TGCTAATGATAAATTAGGAA+TGG | - | chr7.2:6913738-6913757 | None:intergenic | 25.0% |
| ! | TTCAAGAAATTTGCATAAGT+TGG | - | chr7.2:6914494-6914513 | None:intergenic | 25.0% |
| !! | GTAATGAGTTGAGAAAATAT+AGG | + | chr7.2:6914293-6914312 | MS.gene23026:intron | 25.0% |
| !! | TGTTGGCTATATGTATTTAT+AGG | + | chr7.2:6914377-6914396 | MS.gene23026:intron | 25.0% |
| !!! | AGACTATATTTTAAGTAGCT+TGG | - | chr7.2:6914189-6914208 | None:intergenic | 25.0% |
| AAGCCTGCTAATGATAAATT+AGG | - | chr7.2:6913743-6913762 | None:intergenic | 30.0% | |
| GATAGAAGACATAAAAGCTT+TGG | + | chr7.2:6913769-6913788 | MS.gene23026:CDS | 30.0% | |
| GTTTGAATGGAGAAATTAGA+AGG | + | chr7.2:6914759-6914778 | MS.gene23026:CDS | 30.0% | |
| TCAAATGTTGTTGAGCTATT+TGG | - | chr7.2:6914566-6914585 | None:intergenic | 30.0% | |
| !! | CCGTGCTACTTAATATAAAT+TGG | - | chr7.2:6914228-6914247 | None:intergenic | 30.0% |
| AAAGCTTACTCTTCATGACT+TGG | + | chr7.2:6914080-6914099 | MS.gene23026:CDS | 35.0% | |
| AGCTGTGTGATATTATGGAA+AGG | - | chr7.2:6914039-6914058 | None:intergenic | 35.0% | |
| ATTGCAACTTATTCAGCAAC+AGG | + | chr7.2:6914423-6914442 | MS.gene23026:CDS | 35.0% | |
| TTGTATATGACCACATGTGT+CGG | + | chr7.2:6914319-6914338 | MS.gene23026:intron | 35.0% | |
| ! | AGAAGACATAAAAGCTTTGG+AGG | + | chr7.2:6913772-6913791 | MS.gene23026:CDS | 35.0% |
| ! | AGTTTTCTCAGTCAATGAAG+AGG | + | chr7.2:6914711-6914730 | MS.gene23026:CDS | 35.0% |
| ! | ATGTGCTGATATACTCACAT+TGG | + | chr7.2:6913817-6913836 | MS.gene23026:CDS | 35.0% |
| ! | CTTCATTGACTGAGAAAACT+CGG | - | chr7.2:6914711-6914730 | None:intergenic | 35.0% |
| ! | CTTTTCAACTTCACTGGAAA+AGG | + | chr7.2:6914446-6914465 | MS.gene23026:CDS | 35.0% |
| ! | TTTATAGGAGCACACACAAT+TGG | + | chr7.2:6914392-6914411 | MS.gene23026:intron | 35.0% |
| !! | AACAATGTTTCTGGATTGCT+TGG | - | chr7.2:6914657-6914676 | None:intergenic | 35.0% |
| !! | CATGACTTGGTTGTATTATC+AGG | + | chr7.2:6914093-6914112 | MS.gene23026:CDS | 35.0% |
| CACGGACATAGAACAAACAT+CGG | + | chr7.2:6914243-6914262 | MS.gene23026:intron | 40.0% | |
| CCTGTCCTTCTACAAAACAA+GGG | + | chr7.2:6914599-6914618 | MS.gene23026:CDS | 40.0% | |
| GTCTGAGCTGTGTGATATTA+TGG | - | chr7.2:6914044-6914063 | None:intergenic | 40.0% | |
| TCAGCACATGATACAATTCC+TGG | - | chr7.2:6913806-6913825 | None:intergenic | 40.0% | |
| TCCTGTCCTTCTACAAAACA+AGG | + | chr7.2:6914598-6914617 | MS.gene23026:CDS | 40.0% | |
| TCTCAGTCAATGAAGAGGAT+GGG | + | chr7.2:6914716-6914735 | MS.gene23026:CDS | 40.0% | |
| TTCTCAGTCAATGAAGAGGA+TGG | + | chr7.2:6914715-6914734 | MS.gene23026:CDS | 40.0% | |
| TTCTTGAAGACCAAATGCCA+AGG | + | chr7.2:6914506-6914525 | MS.gene23026:CDS | 40.0% | |
| TTTCTCCATTCAAACCAGTG+AGG | - | chr7.2:6914754-6914773 | None:intergenic | 40.0% | |
| ! | AACAGGCTTTTCAACTTCAC+TGG | + | chr7.2:6914440-6914459 | MS.gene23026:CDS | 40.0% |
| ! | GCATAAGTTGGATTCAGAGA+TGG | - | chr7.2:6914482-6914501 | None:intergenic | 40.0% |
| ! | GTGATATTATGGAAAGGTGC+TGG | - | chr7.2:6914033-6914052 | None:intergenic | 40.0% |
| !! | AAGGTGCTGGAATATTGATC+AGG | - | chr7.2:6914020-6914039 | None:intergenic | 40.0% |
| !! | ACCAAATTGGGAAGTGCTTA+CGG | + | chr7.2:6913957-6913976 | MS.gene23026:CDS | 40.0% |
| !! | AGGTGCTGGAATATTGATCA+GGG | - | chr7.2:6914019-6914038 | None:intergenic | 40.0% |
| !!! | AGAGACCCTTGTTTTGTAGA+AGG | - | chr7.2:6914607-6914626 | None:intergenic | 40.0% |
| ATCCATCTCTACTGTTGTGG+TGG | - | chr7.2:6914543-6914562 | None:intergenic | 45.0% | |
| TGGATCCATCTCTACTGTTG+TGG | - | chr7.2:6914546-6914565 | None:intergenic | 45.0% | |
| !! | CCAAATTGGGAAGTGCTTAC+GGG | + | chr7.2:6913958-6913977 | MS.gene23026:CDS | 45.0% |
| !! | GCTTTGGAGGAAAAATGTCC+AGG | + | chr7.2:6913785-6913804 | MS.gene23026:CDS | 45.0% |
| !! | TAATGTAGCACCGACACATG+TGG | - | chr7.2:6914332-6914351 | None:intergenic | 45.0% |
| !!! | CCCTTGTTTTGTAGAAGGAC+AGG | - | chr7.2:6914602-6914621 | None:intergenic | 45.0% |
| CACCACCACAACAGTAGAGA+TGG | + | chr7.2:6914538-6914557 | MS.gene23026:CDS | 50.0% | |
| CCCGTAAGCACTTCCCAATT+TGG | - | chr7.2:6913961-6913980 | None:intergenic | 50.0% | |
| GAAGAGGATGGGAGCTATTG+AGG | + | chr7.2:6914727-6914746 | MS.gene23026:CDS | 50.0% | |
| GGAGCACACACAATTGGAGT+AGG | + | chr7.2:6914398-6914417 | MS.gene23026:intron | 50.0% | |
| GTCACTTAGGCCTTGGCATT+TGG | - | chr7.2:6914519-6914538 | None:intergenic | 50.0% | |
| GTGCTTACGGGTAGAAGAGA+TGG | + | chr7.2:6913970-6913989 | MS.gene23026:CDS | 50.0% | |
| ! | ATTTCAGGGGTGTGACGCAT+CGG | + | chr7.2:6913670-6913689 | MS.gene23026:CDS | 50.0% |
| !! | CTGTTGTGGTGGTGTCACTT+AGG | - | chr7.2:6914532-6914551 | None:intergenic | 50.0% |
| !! | GAGGTCCTCACTGGTTTGAA+TGG | + | chr7.2:6914746-6914765 | MS.gene23026:CDS | 50.0% |
| !! | GTTTTGTTGGAGTCCACTGC+TGG | + | chr7.2:6913692-6913711 | MS.gene23026:CDS | 50.0% |
| !!! | GTGTGACGCATCGGTTTTGT+TGG | + | chr7.2:6913679-6913698 | MS.gene23026:CDS | 50.0% |
| GGAGCTATTGAGGTCCTCAC+TGG | + | chr7.2:6914737-6914756 | MS.gene23026:CDS | 55.0% | |
| GTCCACTGCTGGTAACACTG+CGG | + | chr7.2:6913703-6913722 | MS.gene23026:CDS | 55.0% | |
| TCGGACATGACATTGACGCG+TGG | + | chr7.2:6914262-6914281 | MS.gene23026:intron | 55.0% | |
| !! | TGGTGGTGTCACTTAGGCCT+TGG | - | chr7.2:6914526-6914545 | None:intergenic | 55.0% |
| CTCCGCAGTGTTACCAGCAG+TGG | - | chr7.2:6913708-6913727 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6913662 | 6914802 | 6913662 | ID=MS.gene23026 |
| chr7.2 | mRNA | 6913662 | 6914802 | 6913662 | ID=MS.gene23026.t1;Parent=MS.gene23026 |
| chr7.2 | exon | 6913662 | 6913853 | 6913662 | ID=MS.gene23026.t1.exon1;Parent=MS.gene23026.t1 |
| chr7.2 | CDS | 6913662 | 6913853 | 6913662 | ID=cds.MS.gene23026.t1;Parent=MS.gene23026.t1 |
| chr7.2 | exon | 6913946 | 6914114 | 6913946 | ID=MS.gene23026.t1.exon2;Parent=MS.gene23026.t1 |
| chr7.2 | CDS | 6913946 | 6914114 | 6913946 | ID=cds.MS.gene23026.t1;Parent=MS.gene23026.t1 |
| chr7.2 | exon | 6914399 | 6914802 | 6914399 | ID=MS.gene23026.t1.exon3;Parent=MS.gene23026.t1 |
| chr7.2 | CDS | 6914399 | 6914802 | 6914399 | ID=cds.MS.gene23026.t1;Parent=MS.gene23026.t1 |
| Gene Sequence |
| Protein sequence |
