Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054120.t1 | XP_013466362.1 | 93 | 344 | 23 | 1 | 1 | 344 | 28 | 370 | 1.30E-184 | 655.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054120.t1 | Q94BN2 | 78.4 | 333 | 67 | 2 | 6 | 334 | 25 | 356 | 5.0e-153 | 542.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054120.t1 | A0A072VG69 | 93.0 | 344 | 23 | 1 | 1 | 344 | 28 | 370 | 9.2e-185 | 655.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene054120 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene054120 | 0.800747 | 1.25E-48 | -1.69E-46 |
| MS.gene054120 | MS.gene054742 | 0.808223 | 3.44E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene060087 | 0.807873 | 4.09E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene063988 | 0.81297 | 3.24E-51 | -1.69E-46 |
| MS.gene054120 | MS.gene065466 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene065724 | 0.800691 | 1.28E-48 | -1.69E-46 |
| MS.gene054120 | MS.gene066602 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene068633 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene054120 | MS.gene069166 | 0.806795 | 6.91E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene074299 | 0.836638 | 8.32E-57 | -1.69E-46 |
| MS.gene054120 | MS.gene23026 | 0.805075 | 1.59E-49 | -1.69E-46 |
| MS.gene054120 | MS.gene31249 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene31805 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene054120 | MS.gene35459 | 0.842067 | 3.24E-58 | -1.69E-46 |
| MS.gene054120 | MS.gene35460 | 0.851087 | 1.11E-60 | -1.69E-46 |
| MS.gene054120 | MS.gene38435 | 0.815851 | 7.48E-52 | -1.69E-46 |
| MS.gene054120 | MS.gene40846 | 0.817197 | 3.74E-52 | -1.69E-46 |
| MS.gene054120 | MS.gene42096 | 0.80202 | 6.84E-49 | -1.69E-46 |
| MS.gene054120 | MS.gene55012 | 0.812972 | 3.24E-51 | -1.69E-46 |
| MS.gene054120 | MS.gene60581 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene054120 | MS.gene65724 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene054120 | MS.gene67371 | 0.805844 | 1.10E-49 | -1.69E-46 |
| MS.gene054120 | MS.gene80293 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene054120 | MS.gene80744 | 0.831071 | 2.05E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054120.t1 | MTR_1g028360 | 93.023 | 344 | 23 | 1 | 1 | 344 | 28 | 370 | 0.0 | 630 |
| MS.gene054120.t1 | MTR_3g091090 | 80.769 | 338 | 60 | 3 | 2 | 335 | 21 | 357 | 0.0 | 531 |
| MS.gene054120.t1 | MTR_5g034470 | 65.574 | 305 | 89 | 5 | 30 | 332 | 49 | 339 | 6.33e-149 | 423 |
| MS.gene054120.t1 | MTR_8g063940 | 62.541 | 307 | 101 | 4 | 26 | 331 | 44 | 337 | 2.60e-144 | 411 |
| MS.gene054120.t1 | MTR_5g034470 | 66.090 | 289 | 82 | 5 | 30 | 316 | 49 | 323 | 1.96e-140 | 402 |
| MS.gene054120.t1 | MTR_3g078190 | 53.135 | 303 | 105 | 7 | 33 | 329 | 41 | 312 | 6.32e-102 | 303 |
| MS.gene054120.t1 | MTR_5g006140 | 32.301 | 226 | 144 | 6 | 69 | 289 | 46 | 267 | 4.83e-30 | 117 |
| MS.gene054120.t1 | MTR_5g006140 | 32.407 | 216 | 139 | 5 | 69 | 279 | 46 | 259 | 9.49e-30 | 115 |
| MS.gene054120.t1 | MTR_1g015300 | 30.189 | 265 | 176 | 7 | 62 | 319 | 46 | 308 | 1.15e-29 | 116 |
| MS.gene054120.t1 | MTR_3g104960 | 29.075 | 227 | 145 | 6 | 62 | 283 | 48 | 263 | 1.61e-20 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 21 | 356 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 21 | 356 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 21 | 356 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 21 | 356 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 21 | 356 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 77.745 | 337 | 70 | 2 | 2 | 334 | 38 | 373 | 0.0 | 514 |
| MS.gene054120.t1 | AT5G53120 | 69.780 | 364 | 78 | 4 | 2 | 334 | 21 | 383 | 4.40e-180 | 504 |
| MS.gene054120.t1 | AT1G23820 | 63.072 | 306 | 98 | 4 | 25 | 329 | 36 | 327 | 1.19e-144 | 412 |
| MS.gene054120.t1 | AT1G70310 | 62.745 | 306 | 101 | 3 | 25 | 329 | 40 | 333 | 1.70e-142 | 407 |
| MS.gene054120.t1 | AT1G23820 | 64.113 | 248 | 76 | 3 | 25 | 271 | 80 | 315 | 2.13e-117 | 343 |
| MS.gene054120.t1 | AT5G19530 | 29.778 | 225 | 151 | 5 | 62 | 281 | 40 | 262 | 5.61e-30 | 117 |
| MS.gene054120.t1 | AT5G19530 | 29.778 | 225 | 151 | 5 | 62 | 281 | 47 | 269 | 5.80e-30 | 117 |
Find 64 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCATTCTGCTGTTCTTTC+TGG | 0.068910 | 1.3:+14489880 | MS.gene054120:CDS |
| AATTCCTTCTTGTTGTTTAA+AGG | 0.186248 | 1.3:+14489825 | MS.gene054120:CDS |
| ATCAGACTTTCAAGAAGTTT+TGG | 0.257018 | 1.3:+14490975 | MS.gene054120:CDS |
| GTGGAGATGGTGGAGTTCTA+AGG | 0.279701 | 1.3:+14491379 | MS.gene054120:CDS |
| TATTTGTGAGATAGATAAAA+TGG | 0.298775 | 1.3:+14491437 | MS.gene054120:CDS |
| GGAGATGAGTTATCATTTCT+TGG | 0.301977 | 1.3:-14491159 | None:intergenic |
| TGGCACTTTCCCTCAAGTTC+AGG | 0.317822 | 1.3:-14489862 | None:intergenic |
| TGACATTAGCCAAGGCATTA+AGG | 0.340482 | 1.3:+14492915 | MS.gene054120:CDS |
| ATAGCATCATACTTTCCTTC+AGG | 0.354964 | 1.3:-14491790 | None:intergenic |
| TTAGTTGTTGGTGGTGGAGA+TGG | 0.363986 | 1.3:+14491366 | MS.gene054120:CDS |
| AGCAAATGTTTGTTGACAAA+TGG | 0.374139 | 1.3:-14493008 | None:intergenic |
| TGGAGATCATGTCCTCAATA+AGG | 0.384773 | 1.3:-14492988 | None:intergenic |
| TTCTTGTTGTTTAAAGGCTA+AGG | 0.389325 | 1.3:+14489831 | MS.gene054120:CDS |
| TGGTGGTGTGCTATGTAATA+TGG | 0.402346 | 1.3:+14492940 | MS.gene054120:CDS |
| CAATAATACCTTGGATATGT+TGG | 0.427530 | 1.3:-14493058 | None:intergenic |
| GGAAAAGTGCTTGTACTTGA+TGG | 0.434422 | 1.3:+14491100 | MS.gene054120:CDS |
| ATCGGGTTTACAAAATCAAC+TGG | 0.444824 | 1.3:-14493200 | None:intergenic |
| GGCACTTTCCCTCAAGTTCA+GGG | 0.460943 | 1.3:-14489861 | None:intergenic |
| GTTTCAGTCCCTGAACTTGA+GGG | 0.465362 | 1.3:+14489853 | MS.gene054120:CDS |
| TTGGCAAGCAGTGGTGTGAT+AGG | 0.465537 | 1.3:+14493149 | MS.gene054120:intron |
| TGGTGGTTTAGGTCCTGCTC+AGG | 0.476181 | 1.3:+14492868 | MS.gene054120:intron |
| TCACAGTCTCAATCTTCCTC+TGG | 0.476437 | 1.3:+14489910 | MS.gene054120:CDS |
| GTTGTTGGTGGTGGAGATGG+TGG | 0.478081 | 1.3:+14491369 | MS.gene054120:CDS |
| ATTCTGCTGTTCTTTCTGGA+TGG | 0.481084 | 1.3:+14489884 | MS.gene054120:CDS |
| TTCTCTACAAGTTCCTGAGC+AGG | 0.489434 | 1.3:-14492881 | None:intergenic |
| TTCAACAATCCAATGTGGCC+AGG | 0.498571 | 1.3:+14490079 | MS.gene054120:CDS |
| ACCACCAGGCCTTAATGCCT+TGG | 0.505979 | 1.3:-14492924 | None:intergenic |
| CTTTATCTTATGCTCAAAAG+AGG | 0.509069 | 1.3:+14493172 | MS.gene054120:CDS |
| TCAAATCCAACAGCTAACTC+TGG | 0.513813 | 1.3:-14491584 | None:intergenic |
| GGTTTCAGTCCCTGAACTTG+AGG | 0.517686 | 1.3:+14489852 | MS.gene054120:CDS |
| TTTATCTTATGCTCAAAAGA+GGG | 0.518661 | 1.3:+14493173 | MS.gene054120:CDS |
| TTGCTTCTGTACGTTATGCA+TGG | 0.518868 | 1.3:+14493026 | MS.gene054120:CDS |
| TTGGACAAACCTGGCCACAT+TGG | 0.519525 | 1.3:-14490088 | None:intergenic |
| GCTTCATACTCACCTTATTG+AGG | 0.521166 | 1.3:+14492976 | MS.gene054120:CDS |
| CCAACATGCAGGTGTACTCT+AGG | 0.528257 | 1.3:-14491611 | None:intergenic |
| CTAAGCATATAAGAGAACTT+AGG | 0.536019 | 1.3:+14493252 | MS.gene054120:CDS |
| TGGAGATGGTGGAGTTCTAA+GGG | 0.538304 | 1.3:+14491380 | MS.gene054120:CDS |
| TTTCTTAGATGCACTCCTGA+AGG | 0.543593 | 1.3:+14491775 | MS.gene054120:CDS |
| GTAATATGGCAGAAAGTATG+TGG | 0.561543 | 1.3:+14492954 | MS.gene054120:CDS |
| TTAGCCTTTAAACAACAAGA+AGG | 0.564860 | 1.3:-14489829 | None:intergenic |
| TTAGCCAAGGCATTAAGGCC+TGG | 0.569982 | 1.3:+14492920 | MS.gene054120:CDS |
| TCTACTTTAATTGAATGCAG+TGG | 0.576017 | 1.3:-14490931 | None:intergenic |
| GTTGATTCCTCTGACCCAGT+TGG | 0.594913 | 1.3:+14491817 | MS.gene054120:CDS |
| ATCCAGAAAGAACAGCAGAA+TGG | 0.600763 | 1.3:-14489882 | None:intergenic |
| AGATACCATCACCAACATGC+AGG | 0.601847 | 1.3:-14491622 | None:intergenic |
| AGAACTTAGGTTCTATAACT+CGG | 0.610249 | 1.3:+14493265 | MS.gene054120:CDS |
| GGGACTGAATTGAACAAAGT+GGG | 0.612644 | 1.3:-14491180 | None:intergenic |
| TGACATACCAACTGGGTCAG+AGG | 0.613200 | 1.3:-14491824 | None:intergenic |
| ACTTTAATTGAATGCAGTGG+CGG | 0.619023 | 1.3:-14490928 | None:intergenic |
| ATATTACATAGCACACCACC+AGG | 0.623470 | 1.3:-14492938 | None:intergenic |
| GGGGACTGAATTGAACAAAG+TGG | 0.629263 | 1.3:-14491181 | None:intergenic |
| TTATCTTATGCTCAAAAGAG+GGG | 0.634919 | 1.3:+14493174 | MS.gene054120:CDS |
| AATTGTTCAGTTGACTGAGA+AGG | 0.638902 | 1.3:+14491123 | MS.gene054120:CDS |
| CCTAGAGTACACCTGCATGT+TGG | 0.640270 | 1.3:+14491611 | MS.gene054120:CDS |
| TTTATTTCAACAATCCAATG+TGG | 0.648236 | 1.3:+14490074 | MS.gene054120:CDS |
| GAATTGTGTAGATATAGAGA+AGG | 0.649083 | 1.3:+14489801 | MS.gene054120:CDS |
| CTAGTGTTCCAACATATCCA+AGG | 0.650334 | 1.3:+14493050 | MS.gene054120:CDS |
| GTACACCTGCATGTTGGTGA+TGG | 0.658823 | 1.3:+14491617 | MS.gene054120:CDS |
| GCCAAGGCATTAAGGCCTGG+TGG | 0.681200 | 1.3:+14492923 | MS.gene054120:CDS |
| GGGTTTACAAAATCAACTGG+TGG | 0.688551 | 1.3:-14493197 | None:intergenic |
| CATGAGTTACAGAACTGTGG+CGG | 0.698296 | 1.3:-14491410 | None:intergenic |
| ACTTAGGTTCTATAACTCGG+AGG | 0.698666 | 1.3:+14493268 | MS.gene054120:CDS |
| CAACATGAGTTACAGAACTG+TGG | 0.702544 | 1.3:-14491413 | None:intergenic |
| AATAAAGTGACATACCAACT+GGG | 0.707787 | 1.3:-14491831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAATGAAAAATTAAATT+AGG | + | chr1.3:14492101-14492120 | MS.gene054120:intron | 10.0% |
| !! | TCTATTGAATATATATTAAA+TGG | - | chr1.3:14490876-14490895 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAATCAACTATA+TGG | - | chr1.3:14491507-14491526 | None:intergenic | 10.0% |
| !!! | AACTATTAAAAGTTTTATTT+TGG | + | chr1.3:14492238-14492257 | MS.gene054120:intron | 10.0% |
| !!! | AATAAAACTTTTAATAGTTA+AGG | - | chr1.3:14492237-14492256 | None:intergenic | 10.0% |
| !!! | ATAAAACTTTTAATAGTTAA+GGG | - | chr1.3:14492236-14492255 | None:intergenic | 10.0% |
| !!! | ATATATATTCAATAGAATTT+TGG | + | chr1.3:14490880-14490899 | MS.gene054120:intron | 10.0% |
| !!! | TTTTCAATATACTAATTTAA+TGG | - | chr1.3:14492625-14492644 | None:intergenic | 10.0% |
| !! | AAGTTATTAACATTACAATT+TGG | - | chr1.3:14492548-14492567 | None:intergenic | 15.0% |
| !! | ATTGTAATGTTAATAACTTA+AGG | + | chr1.3:14492549-14492568 | MS.gene054120:intron | 15.0% |
| !! | GAAACAAAAAAATAAGTTAA+GGG | + | chr1.3:14492461-14492480 | MS.gene054120:intron | 15.0% |
| !! | TTGTAATGTTAATAACTTAA+GGG | + | chr1.3:14492550-14492569 | MS.gene054120:intron | 15.0% |
| !!! | AAAAATAACATAACTGTTTT+GGG | - | chr1.3:14491205-14491224 | None:intergenic | 15.0% |
| !!! | AAAGTAAATTTTATCTAGAA+AGG | - | chr1.3:14493905-14493924 | None:intergenic | 15.0% |
| !!! | CTATTTTCTCATATTATTTT+CGG | + | chr1.3:14492752-14492771 | MS.gene054120:intron | 15.0% |
| !!! | TTTAATTTTTTTTGCATTCT+TGG | + | chr1.3:14489951-14489970 | MS.gene054120:intron | 15.0% |
| !!! | TTTTCAGTATTTTTTTAAAC+AGG | + | chr1.3:14490043-14490062 | MS.gene054120:intron | 15.0% |
| !!! | TTTTTCTAACTACTAAAATT+TGG | + | chr1.3:14490410-14490429 | MS.gene054120:intron | 15.0% |
| !! | AAATGTTAAAAAACAAGAGA+AGG | - | chr1.3:14490708-14490727 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr1.3:14492178-14492197 | MS.gene054120:intron | 20.0% |
| !! | ACAAACATATAGTATAGATT+TGG | - | chr1.3:14490205-14490224 | None:intergenic | 20.0% |
| !! | ACAAGTATATATTATGCAAT+TGG | - | chr1.3:14490110-14490129 | None:intergenic | 20.0% |
| !! | ATAAAAAAAAAACGCTTTAC+AGG | + | chr1.3:14490768-14490787 | MS.gene054120:intron | 20.0% |
| !! | ATCATTAATAAAGGATATGT+TGG | - | chr1.3:14493103-14493122 | None:intergenic | 20.0% |
| !! | ATTAGGCTTAATTAATGATT+TGG | + | chr1.3:14492118-14492137 | MS.gene054120:intron | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr1.3:14492177-14492196 | None:intergenic | 20.0% |
| !! | CAAACATATAGTATAGATTT+GGG | - | chr1.3:14490204-14490223 | None:intergenic | 20.0% |
| !! | CAAAGAAATATTATATCCTA+AGG | + | chr1.3:14491934-14491953 | MS.gene054120:intron | 20.0% |
| !! | CGAAACAAAAAAATAAGTTA+AGG | + | chr1.3:14492460-14492479 | MS.gene054120:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr1.3:14492399-14492418 | MS.gene054120:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | - | chr1.3:14492418-14492399 | None:intergenic | 20.0% |
| !! | GAAACCAAAAAGTAATTTAA+GGG | - | chr1.3:14492205-14492224 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAACGCTTTACA+GGG | + | chr1.3:14490769-14490788 | MS.gene054120:intron | 20.0% |
| !! | TAACAACATTAAAACCATTT+AGG | - | chr1.3:14491337-14491356 | None:intergenic | 20.0% |
| !! | TAAGATGCAATCATTAATAA+AGG | - | chr1.3:14493112-14493131 | None:intergenic | 20.0% |
| !! | TAGTATATTGAAAAAACCAA+AGG | + | chr1.3:14492631-14492650 | MS.gene054120:intron | 20.0% |
| !! | TATTAACAAAAAGATACAAG+AGG | - | chr1.3:14491870-14491889 | None:intergenic | 20.0% |
| !! | TATTTGTGAGATAGATAAAA+TGG | + | chr1.3:14491437-14491456 | MS.gene054120:CDS | 20.0% |
| !! | TTATTTACTGTGAAATATGT+TGG | + | chr1.3:14491906-14491925 | MS.gene054120:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr1.3:14492176-14492195 | None:intergenic | 20.0% |
| !! | TTTCCCTTATATACAATATT+AGG | + | chr1.3:14490603-14490622 | MS.gene054120:intron | 20.0% |
| !!! | AAAATAACATAACTGTTTTG+GGG | - | chr1.3:14491204-14491223 | None:intergenic | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | + | chr1.3:14492489-14492508 | MS.gene054120:intron | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | - | chr1.3:14492488-14492507 | None:intergenic | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | + | chr1.3:14492490-14492509 | MS.gene054120:intron | 20.0% |
| !!! | ATCTTAAGTTAATTTGTTGA+GGG | - | chr1.3:14490908-14490927 | None:intergenic | 20.0% |
| !!! | CAAAAATAACATAACTGTTT+TGG | - | chr1.3:14491206-14491225 | None:intergenic | 20.0% |
| !!! | CATTTAGGATATGTATAAAA+CGG | - | chr1.3:14491322-14491341 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTTGTTTCGATT+TGG | - | chr1.3:14492457-14492476 | None:intergenic | 20.0% |
| !!! | GAAAATAGAATAATTTGCTT+TGG | - | chr1.3:14492740-14492759 | None:intergenic | 20.0% |
| !!! | TAATGGCTTAATTATTCTTT+TGG | - | chr1.3:14492608-14492627 | None:intergenic | 20.0% |
| !!! | TTGATTAACACCAATTATTT+TGG | + | chr1.3:14491057-14491076 | MS.gene054120:intron | 20.0% |
| ! | AAAAAAAAAACGCTTTACAG+GGG | + | chr1.3:14490770-14490789 | MS.gene054120:intron | 25.0% |
| ! | AAACACATTAACATAAGTGA+AGG | - | chr1.3:14489991-14490010 | None:intergenic | 25.0% |
| ! | AAATATGCATGCAATTTGAA+CGG | + | chr1.3:14493629-14493648 | MS.gene054120:intron | 25.0% |
| ! | AAATTTAGTGGTTATGTTTG+AGG | + | chr1.3:14491961-14491980 | MS.gene054120:intron | 25.0% |
| ! | ACAATACAAGAAAGAAAAAC+AGG | - | chr1.3:14493805-14493824 | None:intergenic | 25.0% |
| ! | AGAATTGATAGAAAGTAGAA+AGG | - | chr1.3:14490812-14490831 | None:intergenic | 25.0% |
| ! | AGTAGAAAAAAAATTGTACG+AGG | + | chr1.3:14490948-14490967 | MS.gene054120:CDS | 25.0% |
| ! | ATGAAATCAAAGCAAAATTG+TGG | - | chr1.3:14492012-14492031 | None:intergenic | 25.0% |
| ! | ATGCTATTATTACTCGAAAA+TGG | - | chr1.3:14493724-14493743 | None:intergenic | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr1.3:14492398-14492417 | MS.gene054120:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | - | chr1.3:14492417-14492398 | None:intergenic | 25.0% |
| ! | CGAAACCAAAAAGTAATTTA+AGG | - | chr1.3:14492206-14492225 | None:intergenic | 25.0% |
| ! | GAATTGATAGAAAGTAGAAA+GGG | - | chr1.3:14490811-14490830 | None:intergenic | 25.0% |
| ! | GACTGTAAAACCAAAATAAT+TGG | - | chr1.3:14491070-14491089 | None:intergenic | 25.0% |
| ! | GATGAATGTATTAGAGTTAA+GGG | + | chr1.3:14492368-14492387 | MS.gene054120:intron | 25.0% |
| ! | GCACCTAATATTGTATATAA+GGG | - | chr1.3:14490609-14490628 | None:intergenic | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr1.3:14492145-14492164 | None:intergenic | 25.0% |
| ! | GTATTTGAAAATCCAAAGTA+GGG | - | chr1.3:14493604-14493623 | None:intergenic | 25.0% |
| ! | TAGAAGCAACAAATATCTTT+GGG | - | chr1.3:14493311-14493330 | None:intergenic | 25.0% |
| ! | TCAAAAACTACAATATCCTA+AGG | + | chr1.3:14492031-14492050 | MS.gene054120:intron | 25.0% |
| ! | TCAATAGACAGAATAAAACT+TGG | - | chr1.3:14493849-14493868 | None:intergenic | 25.0% |
| ! | TCTCTTATTATCTCTTTCTT+TGG | + | chr1.3:14492848-14492867 | MS.gene054120:intron | 25.0% |
| ! | TGCACCTAATATTGTATATA+AGG | - | chr1.3:14490610-14490629 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr1.3:14492146-14492165 | None:intergenic | 25.0% |
| ! | TGTATTTGAAAATCCAAAGT+AGG | - | chr1.3:14493605-14493624 | None:intergenic | 25.0% |
| ! | TTAATTAATAACCATCCTAG+TGG | - | chr1.3:14490837-14490856 | None:intergenic | 25.0% |
| ! | TTGGATCGATTAAAATCAAA+CGG | - | chr1.3:14491298-14491317 | None:intergenic | 25.0% |
| ! | TTTATCTTATGCTCAAAAGA+GGG | + | chr1.3:14493173-14493192 | MS.gene054120:CDS | 25.0% |
| ! | TTTATTTCAACAATCCAATG+TGG | + | chr1.3:14490074-14490093 | MS.gene054120:CDS | 25.0% |
| !! | CGTTTTATACATATCCTAAA+TGG | + | chr1.3:14491320-14491339 | MS.gene054120:intron | 25.0% |
| !! | GTTTTACAGTCATTAACATA+TGG | + | chr1.3:14491079-14491098 | MS.gene054120:intron | 25.0% |
| !! | TTTTTGTGTTTTGTCATGAA+TGG | + | chr1.3:14493751-14493770 | MS.gene054120:intron | 25.0% |
| !!! | AAATAACATAACTGTTTTGG+GGG | - | chr1.3:14491203-14491222 | None:intergenic | 25.0% |
| !!! | AATTCCTTCTTGTTGTTTAA+AGG | + | chr1.3:14489825-14489844 | MS.gene054120:CDS | 25.0% |
| !!! | ATATTCTAAAATCCCTACTT+TGG | + | chr1.3:14493589-14493608 | MS.gene054120:intron | 25.0% |
| !!! | ATTACTTTTTGGTTTCGTTT+TGG | + | chr1.3:14492209-14492228 | MS.gene054120:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr1.3:14492269-14492288 | MS.gene054120:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr1.3:14492288-14492269 | None:intergenic | 25.0% |
| !!! | GATCTTAAGTTAATTTGTTG+AGG | - | chr1.3:14490909-14490928 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr1.3:14492149-14492168 | MS.gene054120:intron | 25.0% |
| !!! | TATTTGTTTTCTTCCTTGTT+TGG | + | chr1.3:14493130-14493149 | MS.gene054120:intron | 25.0% |
| !!! | TGGTACCTTAACTTATTTTT+TGG | - | chr1.3:14492588-14492607 | None:intergenic | 25.0% |
| AACCCTATTGAAAAAGTTGA+AGG | + | chr1.3:14493224-14493243 | MS.gene054120:CDS | 30.0% | |
| AATAAAGTGACATACCAACT+GGG | - | chr1.3:14491834-14491853 | None:intergenic | 30.0% | |
| ACCACTAAATTTATCACCTT+AGG | - | chr1.3:14491953-14491972 | None:intergenic | 30.0% | |
| AGAACTTAGGTTCTATAACT+CGG | + | chr1.3:14493265-14493284 | MS.gene054120:CDS | 30.0% | |
| AGGATATGTATAAAACGGTT+TGG | - | chr1.3:14491317-14491336 | None:intergenic | 30.0% | |
| ATACATTCATCCTAACGTAA+AGG | - | chr1.3:14492359-14492378 | None:intergenic | 30.0% | |
| ATAGAAAGTAGAAAGGGAAT+GGG | - | chr1.3:14490805-14490824 | None:intergenic | 30.0% | |
| ATTGTATATAAGGGAAACCT+GGG | - | chr1.3:14490600-14490619 | None:intergenic | 30.0% | |
| CAATAATACCTTGGATATGT+TGG | - | chr1.3:14493061-14493080 | None:intergenic | 30.0% | |
| CAATTGATCATTCATTCACT+AGG | + | chr1.3:14491544-14491563 | MS.gene054120:intron | 30.0% | |
| CTAAGCATATAAGAGAACTT+AGG | + | chr1.3:14493252-14493271 | MS.gene054120:CDS | 30.0% | |
| CTTATTATCTCTTTCTTTGG+TGG | + | chr1.3:14492851-14492870 | MS.gene054120:intron | 30.0% | |
| CTTTATCTTATGCTCAAAAG+AGG | + | chr1.3:14493172-14493191 | MS.gene054120:CDS | 30.0% | |
| GAATTGTGTAGATATAGAGA+AGG | + | chr1.3:14489801-14489820 | MS.gene054120:CDS | 30.0% | |
| GGATGAATGTATTAGAGTTA+AGG | + | chr1.3:14492367-14492386 | MS.gene054120:intron | 30.0% | |
| GTAGAAGCAACAAATATCTT+TGG | - | chr1.3:14493312-14493331 | None:intergenic | 30.0% | |
| TAATAAAGTGACATACCAAC+TGG | - | chr1.3:14491835-14491854 | None:intergenic | 30.0% | |
| TATAAGCGAGAATCTTTCTT+TGG | + | chr1.3:14492813-14492832 | MS.gene054120:intron | 30.0% | |
| TATTGTATATAAGGGAAACC+TGG | - | chr1.3:14490601-14490620 | None:intergenic | 30.0% | |
| TATTTGTATGAGTGCATGTT+TGG | + | chr1.3:14490269-14490288 | MS.gene054120:intron | 30.0% | |
| TCCTAAGGTGATAAATTTAG+TGG | + | chr1.3:14491949-14491968 | MS.gene054120:intron | 30.0% | |
| TCGATTAAAATCAAACGGTT+TGG | - | chr1.3:14491293-14491312 | None:intergenic | 30.0% | |
| TCTACTTTAATTGAATGCAG+TGG | - | chr1.3:14490934-14490953 | None:intergenic | 30.0% | |
| TGCATTTGATTATCACATTG+CGG | + | chr1.3:14490626-14490645 | MS.gene054120:intron | 30.0% | |
| TGGCAAAAGAATAAATGAGT+GGG | - | chr1.3:14493829-14493848 | None:intergenic | 30.0% | |
| TTATCTTATGCTCAAAAGAG+GGG | + | chr1.3:14493174-14493193 | MS.gene054120:CDS | 30.0% | |
| TTCTATCAATTCTTACCACT+AGG | + | chr1.3:14490819-14490838 | MS.gene054120:intron | 30.0% | |
| TTGGCAAAAGAATAAATGAG+TGG | - | chr1.3:14493830-14493849 | None:intergenic | 30.0% | |
| TTGGCTAATGTCACAAAAAA+TGG | - | chr1.3:14492908-14492927 | None:intergenic | 30.0% | |
| ! | AGCAAATGTTTGTTGACAAA+TGG | - | chr1.3:14493011-14493030 | None:intergenic | 30.0% |
| ! | ATCAGACTTTCAAGAAGTTT+TGG | + | chr1.3:14490975-14490994 | MS.gene054120:CDS | 30.0% |
| ! | CTTTACGTTGAAAGTGTATT+TGG | + | chr1.3:14492688-14492707 | MS.gene054120:intron | 30.0% |
| ! | GTTTTACCTTATCATTGTGA+CGG | + | chr1.3:14491225-14491244 | MS.gene054120:intron | 30.0% |
| ! | TGTCTATTGATTGCATTAGA+TGG | + | chr1.3:14493859-14493878 | MS.gene054120:intron | 30.0% |
| ! | TGTGTTTACGATGATTTTCT+TGG | + | chr1.3:14490004-14490023 | MS.gene054120:intron | 30.0% |
| ! | TGTTGCTTCTACAAAGTTAA+AGG | + | chr1.3:14493320-14493339 | MS.gene054120:intron | 30.0% |
| ! | TTAGCCTTTAAACAACAAGA+AGG | - | chr1.3:14489832-14489851 | None:intergenic | 30.0% |
| ! | TTGTGTAGTGTTAGTATTGA+TGG | + | chr1.3:14490496-14490515 | MS.gene054120:intron | 30.0% |
| ! | TTTCGAGTAATAATAGCATG+TGG | + | chr1.3:14493725-14493744 | MS.gene054120:intron | 30.0% |
| !! | GGTTTTAATGTTGTTAATCC+AGG | + | chr1.3:14491341-14491360 | MS.gene054120:intron | 30.0% |
| !! | TGGTCCCTTAAATTACTTTT+TGG | + | chr1.3:14492198-14492217 | MS.gene054120:intron | 30.0% |
| !! | TGGTCTCTTAACTTACTTTT+TGG | - | chr1.3:14492528-14492547 | None:intergenic | 30.0% |
| !! | TTCTTGTTGTTTAAAGGCTA+AGG | + | chr1.3:14489831-14489850 | MS.gene054120:CDS | 30.0% |
| !! | TTTACCAGCATTTTTGAAGA+GGG | + | chr1.3:14494003-14494022 | MS.gene054120:CDS | 30.0% |
| !!! | ACTTTTTCAATAGGGTTGAT+CGG | - | chr1.3:14493221-14493240 | None:intergenic | 30.0% |
| !!! | AGTGTTAGTATTGATGGTTT+TGG | + | chr1.3:14490502-14490521 | MS.gene054120:intron | 30.0% |
| !!! | ATTTTTTGTGACATTAGCCA+AGG | + | chr1.3:14492907-14492926 | MS.gene054120:CDS | 30.0% |
| !!! | CTTACTTTTTGGTTTCGTTT+TGG | - | chr1.3:14492517-14492536 | None:intergenic | 30.0% |
| !!! | TCAAGAAGTTTTGGTTTTTG+AGG | + | chr1.3:14490984-14491003 | MS.gene054120:CDS | 30.0% |
| !!! | TGCCTTCAACTTTTTCAATA+GGG | - | chr1.3:14493229-14493248 | None:intergenic | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | + | chr1.3:14492258-14492277 | MS.gene054120:intron | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr1.3:14492277-14492258 | None:intergenic | 30.0% |
| !!! | TTAATCCAGGTTTTAGTTGT+TGG | + | chr1.3:14491354-14491373 | MS.gene054120:intron | 30.0% |
| !!! | TTGCCTTCAACTTTTTCAAT+AGG | - | chr1.3:14493230-14493249 | None:intergenic | 30.0% |
| AATTGTTCAGTTGACTGAGA+AGG | + | chr1.3:14491123-14491142 | MS.gene054120:CDS | 35.0% | |
| ACTTTAATTGAATGCAGTGG+CGG | - | chr1.3:14490931-14490950 | None:intergenic | 35.0% | |
| ATAGCATCATACTTTCCTTC+AGG | - | chr1.3:14491793-14491812 | None:intergenic | 35.0% | |
| ATCAATTCTTACCACTAGGA+TGG | + | chr1.3:14490823-14490842 | MS.gene054120:intron | 35.0% | |
| ATCGGGTTTACAAAATCAAC+TGG | - | chr1.3:14493203-14493222 | None:intergenic | 35.0% | |
| ATTATGCAATTGGACAAACC+TGG | - | chr1.3:14490100-14490119 | None:intergenic | 35.0% | |
| GAGTCTGAACAATAATACCT+TGG | - | chr1.3:14493070-14493089 | None:intergenic | 35.0% | |
| GATAGAAAGTAGAAAGGGAA+TGG | - | chr1.3:14490806-14490825 | None:intergenic | 35.0% | |
| GATGTCTAACTTTGATCGAA+TGG | + | chr1.3:14490144-14490163 | MS.gene054120:intron | 35.0% | |
| GGAGATGAGTTATCATTTCT+TGG | - | chr1.3:14491162-14491181 | None:intergenic | 35.0% | |
| GTTGCGAACAATCATCATAT+TGG | + | chr1.3:14493538-14493557 | MS.gene054120:intron | 35.0% | |
| TAGAAAGTAGAAAGGGAATG+GGG | - | chr1.3:14490804-14490823 | None:intergenic | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr1.3:14492138-14492157 | MS.gene054120:intron | 35.0% | |
| TGTCTGACATGTTTCAATGT+CGG | + | chr1.3:14492711-14492730 | MS.gene054120:intron | 35.0% | |
| TTGTATATAAGGGAAACCTG+GGG | - | chr1.3:14490599-14490618 | None:intergenic | 35.0% | |
| ! | AAAATGGATTCGCTATCGTT+GGG | - | chr1.3:14493708-14493727 | None:intergenic | 35.0% |
| ! | ATCTCTTTCTTTGGTGGTTT+AGG | + | chr1.3:14492857-14492876 | MS.gene054120:intron | 35.0% |
| ! | GTAATATGGCAGAAAGTATG+TGG | + | chr1.3:14492954-14492973 | MS.gene054120:CDS | 35.0% |
| ! | TACAAAGTTAAAGGCGTGTT+CGG | + | chr1.3:14493329-14493348 | MS.gene054120:intron | 35.0% |
| ! | TATTTTCCAGAGTTAGCTGT+TGG | + | chr1.3:14491578-14491597 | MS.gene054120:CDS | 35.0% |
| ! | TTAGCACAAAAGAAAGTACG+AGG | - | chr1.3:14492060-14492079 | None:intergenic | 35.0% |
| !! | CTTTACCAGCATTTTTGAAG+AGG | + | chr1.3:14494002-14494021 | MS.gene054120:CDS | 35.0% |
| !! | TCTCAGTCATTTTGATCCTT+TGG | - | chr1.3:14492650-14492669 | None:intergenic | 35.0% |
| !! | TGTTGATGACACAATGAGTT+AGG | - | chr1.3:14490373-14490392 | None:intergenic | 35.0% |
| !!! | CTTTTTCAATAGGGTTGATC+GGG | - | chr1.3:14493220-14493239 | None:intergenic | 35.0% |
| !!! | TGGTTTTGGTTTCTATCATC+AGG | + | chr1.3:14490516-14490535 | MS.gene054120:intron | 35.0% |
| ACTTAGGTTCTATAACTCGG+AGG | + | chr1.3:14493268-14493287 | MS.gene054120:CDS | 40.0% | |
| AGAAAGTAGAAAGGGAATGG+GGG | - | chr1.3:14490803-14490822 | None:intergenic | 40.0% | |
| ATATTACATAGCACACCACC+AGG | - | chr1.3:14492941-14492960 | None:intergenic | 40.0% | |
| ATCCAGAAAGAACAGCAGAA+TGG | - | chr1.3:14489885-14489904 | None:intergenic | 40.0% | |
| ATTCTGCTGTTCTTTCTGGA+TGG | + | chr1.3:14489884-14489903 | MS.gene054120:CDS | 40.0% | |
| CAACATGAGTTACAGAACTG+TGG | - | chr1.3:14491416-14491435 | None:intergenic | 40.0% | |
| CGAATTCCGTCACAATGATA+AGG | - | chr1.3:14491234-14491253 | None:intergenic | 40.0% | |
| CTAGTGTTCCAACATATCCA+AGG | + | chr1.3:14493050-14493069 | MS.gene054120:CDS | 40.0% | |
| GAATGGTTCAGATGAATGTG+TGG | + | chr1.3:14490161-14490180 | MS.gene054120:intron | 40.0% | |
| GCGAACAATCATCATATTGG+TGG | + | chr1.3:14493541-14493560 | MS.gene054120:intron | 40.0% | |
| GCTTCATACTCACCTTATTG+AGG | + | chr1.3:14492976-14492995 | MS.gene054120:CDS | 40.0% | |
| GGGACTGAATTGAACAAAGT+GGG | - | chr1.3:14491183-14491202 | None:intergenic | 40.0% | |
| GGGTTTACAAAATCAACTGG+TGG | - | chr1.3:14493200-14493219 | None:intergenic | 40.0% | |
| TAAAGGACCAAAGTGGTTGA+CGG | - | chr1.3:14492342-14492361 | None:intergenic | 40.0% | |
| TCAAATCCAACAGCTAACTC+TGG | - | chr1.3:14491587-14491606 | None:intergenic | 40.0% | |
| TGATATGTGTCGTGTCTGAT+AGG | + | chr1.3:14493356-14493375 | MS.gene054120:intron | 40.0% | |
| TGGAGATCATGTCCTCAATA+AGG | - | chr1.3:14492991-14493010 | None:intergenic | 40.0% | |
| TGTATATAAGGGAAACCTGG+GGG | - | chr1.3:14490598-14490617 | None:intergenic | 40.0% | |
| TTGCTTCTGTACGTTATGCA+TGG | + | chr1.3:14493026-14493045 | MS.gene054120:CDS | 40.0% | |
| TTTCTTAGATGCACTCCTGA+AGG | + | chr1.3:14491775-14491794 | MS.gene054120:CDS | 40.0% | |
| TTTGATTATCACATTGCGGC+TGG | + | chr1.3:14490630-14490649 | MS.gene054120:intron | 40.0% | |
| ! | AGAAAGTACGAGGAAACCTT+AGG | - | chr1.3:14492050-14492069 | None:intergenic | 40.0% |
| ! | ATCATCATATTGGTGGCCAT+TGG | + | chr1.3:14493548-14493567 | MS.gene054120:intron | 40.0% |
| ! | GAAAATGGATTCGCTATCGT+TGG | - | chr1.3:14493709-14493728 | None:intergenic | 40.0% |
| ! | TCGCGACCTATAGGATTTTA+TGG | - | chr1.3:14490674-14490693 | None:intergenic | 40.0% |
| ! | TGACATTAGCCAAGGCATTA+AGG | + | chr1.3:14492915-14492934 | MS.gene054120:CDS | 40.0% |
| ! | TGGTGGTGTGCTATGTAATA+TGG | + | chr1.3:14492940-14492959 | MS.gene054120:CDS | 40.0% |
| !! | ACTTTCAACGTAAAGTGTCG+AGG | - | chr1.3:14492683-14492702 | None:intergenic | 40.0% |
| !! | GGAAAAGTGCTTGTACTTGA+TGG | + | chr1.3:14491100-14491119 | MS.gene054120:CDS | 40.0% |
| !!! | ATCCAGGTTTTAGTTGTTGG+TGG | + | chr1.3:14491357-14491376 | MS.gene054120:intron | 40.0% |
| AATGAATATCCACGACCGCA+TGG | - | chr1.3:14491260-14491279 | None:intergenic | 45.0% | |
| ACCTCCCTCTTCAAAAATGC+TGG | - | chr1.3:14494010-14494029 | None:intergenic | 45.0% | |
| AGATACCATCACCAACATGC+AGG | - | chr1.3:14491625-14491644 | None:intergenic | 45.0% | |
| CACCACCAACAACTAAAACC+TGG | - | chr1.3:14491362-14491381 | None:intergenic | 45.0% | |
| CATGAGTTACAGAACTGTGG+CGG | - | chr1.3:14491413-14491432 | None:intergenic | 45.0% | |
| CCACTTTGGTCCTTTACGTT+AGG | + | chr1.3:14492346-14492365 | MS.gene054120:intron | 45.0% | |
| CCTAACGTAAAGGACCAAAG+TGG | - | chr1.3:14492349-14492368 | None:intergenic | 45.0% | |
| GAAGCACATTCAATCAGTGG+CGG | + | chr1.3:14490540-14490559 | MS.gene054120:intron | 45.0% | |
| GGGGACTGAATTGAACAAAG+TGG | - | chr1.3:14491184-14491203 | None:intergenic | 45.0% | |
| GTTGACGGAGGAAGAGTTAA+GGG | - | chr1.3:14492327-14492346 | None:intergenic | 45.0% | |
| GTTTCAGTCCCTGAACTTGA+GGG | + | chr1.3:14489853-14489872 | MS.gene054120:CDS | 45.0% | |
| TCACAGTCTCAATCTTCCTC+TGG | + | chr1.3:14489910-14489929 | MS.gene054120:CDS | 45.0% | |
| TGACGGAATTCGATTCCATG+CGG | + | chr1.3:14491242-14491261 | MS.gene054120:intron | 45.0% | |
| TGCCATTCTGCTGTTCTTTC+TGG | + | chr1.3:14489880-14489899 | MS.gene054120:CDS | 45.0% | |
| TTCAACAATCCAATGTGGCC+AGG | + | chr1.3:14490079-14490098 | MS.gene054120:CDS | 45.0% | |
| TTCTCTACAAGTTCCTGAGC+AGG | - | chr1.3:14492884-14492903 | None:intergenic | 45.0% | |
| ! | GGAGAAGCACATTCAATCAG+TGG | + | chr1.3:14490537-14490556 | MS.gene054120:intron | 45.0% |
| ! | GGGGTGCCATAAAATCCTAT+AGG | + | chr1.3:14490665-14490684 | MS.gene054120:intron | 45.0% |
| !! | AATCAGTGGCGGATCTCTTT+AGG | + | chr1.3:14490551-14490570 | MS.gene054120:intron | 45.0% |
| !! | ACCAGCATTTTTGAAGAGGG+AGG | + | chr1.3:14494006-14494025 | MS.gene054120:CDS | 45.0% |
| !! | ATCAGTGGCGGATCTCTTTA+GGG | + | chr1.3:14490552-14490571 | MS.gene054120:intron | 45.0% |
| !! | GCATGATTGATGATGACCAG+AGG | - | chr1.3:14489929-14489948 | None:intergenic | 45.0% |
| !! | GTAAAGTGTCGAGGCTACAT+AGG | - | chr1.3:14492674-14492693 | None:intergenic | 45.0% |
| !! | TGGAGATGGTGGAGTTCTAA+GGG | + | chr1.3:14491380-14491399 | MS.gene054120:CDS | 45.0% |
| !! | TTAGTTGTTGGTGGTGGAGA+TGG | + | chr1.3:14491366-14491385 | MS.gene054120:CDS | 45.0% |
| !!! | CAGGTTTTAGTTGTTGGTGG+TGG | + | chr1.3:14491360-14491379 | MS.gene054120:intron | 45.0% |
| AATTCGATTCCATGCGGTCG+TGG | + | chr1.3:14491248-14491267 | MS.gene054120:intron | 50.0% | |
| ACACCACTGCTTGCCAAACA+AGG | - | chr1.3:14493146-14493165 | None:intergenic | 50.0% | |
| ACCCTGCATTCACACAGCTA+GGG | - | chr1.3:14493683-14493702 | None:intergenic | 50.0% | |
| ACCGTCCCATCTTGATCCAA+TGG | - | chr1.3:14493567-14493586 | None:intergenic | 50.0% | |
| CCAACATGCAGGTGTACTCT+AGG | - | chr1.3:14491614-14491633 | None:intergenic | 50.0% | |
| CCTAGAGTACACCTGCATGT+TGG | + | chr1.3:14491611-14491630 | MS.gene054120:CDS | 50.0% | |
| GCCATTGGATCAAGATGGGA+CGG | + | chr1.3:14493563-14493582 | MS.gene054120:intron | 50.0% | |
| GGCACTTTCCCTCAAGTTCA+GGG | - | chr1.3:14489864-14489883 | None:intergenic | 50.0% | |
| GGTGGCCATTGGATCAAGAT+GGG | + | chr1.3:14493559-14493578 | MS.gene054120:intron | 50.0% | |
| GGTTGACGGAGGAAGAGTTA+AGG | - | chr1.3:14492328-14492347 | None:intergenic | 50.0% | |
| GGTTTCAGTCCCTGAACTTG+AGG | + | chr1.3:14489852-14489871 | MS.gene054120:CDS | 50.0% | |
| TACCCTGCATTCACACAGCT+AGG | - | chr1.3:14493684-14493703 | None:intergenic | 50.0% | |
| TCTTCCTCCGTCAACCACTT+TGG | + | chr1.3:14492332-14492351 | MS.gene054120:intron | 50.0% | |
| TGACATACCAACTGGGTCAG+AGG | - | chr1.3:14491827-14491846 | None:intergenic | 50.0% | |
| TGGCACTTTCCCTCAAGTTC+AGG | - | chr1.3:14489865-14489884 | None:intergenic | 50.0% | |
| TGGTGGCCATTGGATCAAGA+TGG | + | chr1.3:14493558-14493577 | MS.gene054120:intron | 50.0% | |
| TTGGACAAACCTGGCCACAT+TGG | - | chr1.3:14490091-14490110 | None:intergenic | 50.0% | |
| TTGGCAAGCAGTGGTGTGAT+AGG | + | chr1.3:14493149-14493168 | MS.gene054120:intron | 50.0% | |
| ! | CTTCCTTGTTTGGCAAGCAG+TGG | + | chr1.3:14493140-14493159 | MS.gene054120:intron | 50.0% |
| ! | GGATCTCTTTAGGGACTGGT+GGG | + | chr1.3:14490561-14490580 | MS.gene054120:intron | 50.0% |
| ! | GTACACCTGCATGTTGGTGA+TGG | + | chr1.3:14491617-14491636 | MS.gene054120:CDS | 50.0% |
| ! | GTTGATTCCTCTGACCCAGT+TGG | + | chr1.3:14491817-14491836 | MS.gene054120:CDS | 50.0% |
| ! | TTAGCCAAGGCATTAAGGCC+TGG | + | chr1.3:14492920-14492939 | MS.gene054120:CDS | 50.0% |
| !! | GTGGAGATGGTGGAGTTCTA+AGG | + | chr1.3:14491379-14491398 | MS.gene054120:CDS | 50.0% |
| ACCACCAGGCCTTAATGCCT+TGG | - | chr1.3:14492927-14492946 | None:intergenic | 55.0% | |
| AGGACCAAAGTGGTTGACGG+AGG | - | chr1.3:14492339-14492358 | None:intergenic | 55.0% | |
| CGACGTGTCAGTGTCATGTC+AGG | + | chr1.3:14493430-14493449 | MS.gene054120:intron | 55.0% | |
| GCCCTAGCTGTGTGAATGCA+GGG | + | chr1.3:14493679-14493698 | MS.gene054120:intron | 55.0% | |
| GTCTCGAACTCGCGACCTAT+AGG | - | chr1.3:14490683-14490702 | None:intergenic | 55.0% | |
| TGCCCTAGCTGTGTGAATGC+AGG | + | chr1.3:14493678-14493697 | MS.gene054120:intron | 55.0% | |
| TGGTGGTTTAGGTCCTGCTC+AGG | + | chr1.3:14492868-14492887 | MS.gene054120:intron | 55.0% | |
| ! | CGGATCTCTTTAGGGACTGG+TGG | + | chr1.3:14490560-14490579 | MS.gene054120:intron | 55.0% |
| ! | TGGCGGATCTCTTTAGGGAC+TGG | + | chr1.3:14490557-14490576 | MS.gene054120:intron | 55.0% |
| !! | GTTGTTGGTGGTGGAGATGG+TGG | + | chr1.3:14491369-14491388 | MS.gene054120:CDS | 55.0% |
| ! | GCCAAGGCATTAAGGCCTGG+TGG | + | chr1.3:14492923-14492942 | MS.gene054120:CDS | 60.0% |
| ! | TCACATTGCGGCTGGCTCAG+TGG | + | chr1.3:14490638-14490657 | MS.gene054120:intron | 60.0% |
| ! | TGCGGCTGGCTCAGTGGAAA+GGG | + | chr1.3:14490644-14490663 | MS.gene054120:intron | 60.0% |
| ! | TTAGGGACTGGTGGGTGCCA+TGG | + | chr1.3:14490569-14490588 | MS.gene054120:intron | 60.0% |
| ! | TTGCGGCTGGCTCAGTGGAA+AGG | + | chr1.3:14490643-14490662 | MS.gene054120:intron | 60.0% |
| GGGAAACCTGGGGGATGCCA+TGG | - | chr1.3:14490589-14490608 | None:intergenic | 65.0% | |
| ! | CGGCTGGCTCAGTGGAAAGG+GGG | + | chr1.3:14490646-14490665 | MS.gene054120:intron | 65.0% |
| ! | GCGGCTGGCTCAGTGGAAAG+GGG | + | chr1.3:14490645-14490664 | MS.gene054120:intron | 65.0% |
| ! | TGGGTGCCATGGCATCCCCC+AGG | + | chr1.3:14490580-14490599 | MS.gene054120:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 14489799 | 14494078 | 14489799 | ID=MS.gene054120 |
| chr1.3 | mRNA | 14489799 | 14494078 | 14489799 | ID=MS.gene054120.t1;Parent=MS.gene054120 |
| chr1.3 | exon | 14489799 | 14489931 | 14489799 | ID=MS.gene054120.t1.exon1;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14489799 | 14489931 | 14489799 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14490065 | 14490100 | 14490065 | ID=MS.gene054120.t1.exon2;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14490065 | 14490100 | 14490065 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14490926 | 14491005 | 14490926 | ID=MS.gene054120.t1.exon3;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14490926 | 14491005 | 14490926 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14491088 | 14491210 | 14491088 | ID=MS.gene054120.t1.exon4;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14491088 | 14491210 | 14491088 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14491363 | 14491467 | 14491363 | ID=MS.gene054120.t1.exon5;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14491363 | 14491467 | 14491363 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14491566 | 14491638 | 14491566 | ID=MS.gene054120.t1.exon6;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14491566 | 14491638 | 14491566 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14491767 | 14491838 | 14491767 | ID=MS.gene054120.t1.exon7;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14491767 | 14491838 | 14491767 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14492879 | 14493071 | 14492879 | ID=MS.gene054120.t1.exon8;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14492879 | 14493071 | 14492879 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14493160 | 14493289 | 14493160 | ID=MS.gene054120.t1.exon9;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14493160 | 14493289 | 14493160 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| chr1.3 | exon | 14493983 | 14494078 | 14493983 | ID=MS.gene054120.t1.exon10;Parent=MS.gene054120.t1 |
| chr1.3 | CDS | 14493983 | 14494078 | 14493983 | ID=cds.MS.gene054120.t1;Parent=MS.gene054120.t1 |
| Gene Sequence |
| Protein sequence |
