Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23535.t1 | XP_013449922.1 | 96.6 | 711 | 24 | 0 | 1 | 711 | 27 | 737 | 0.00E+00 | 1377.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23535.t1 | B5WWZ9 | 78.6 | 718 | 147 | 3 | 1 | 711 | 32 | 749 | 0.0e+00 | 1149.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23535.t1 | A0A072UDR1 | 96.6 | 711 | 24 | 0 | 1 | 711 | 27 | 737 | 0.0e+00 | 1377.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene23535 | 0.805288 | 1.44E-49 | -1.69E-46 |
| MS.gene049151 | MS.gene23535 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene23535 | 0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene23535 | 0.817949 | 2.53E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene23535 | 0.816809 | 4.57E-52 | -1.69E-46 |
| MS.gene049599 | MS.gene23535 | -0.805411 | 1.35E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene23535 | 0.829083 | 6.28E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene23535 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene23535 | 0.820358 | 7.16E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene23535 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene23535 | 0.801224 | 9.96E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene23535 | -0.808786 | 2.61E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene23535 | 0.818827 | 1.60E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene23535 | -0.815122 | 1.09E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene23535 | 0.84754 | 1.08E-59 | -1.69E-46 |
| MS.gene050787 | MS.gene23535 | 0.81272 | 3.68E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene23535 | -0.806452 | 8.17E-50 | -1.69E-46 |
| MS.gene05127 | MS.gene23535 | -0.800306 | 1.53E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene23535 | 0.841089 | 5.87E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene23535 | 0.833051 | 6.66E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene23535 | 0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene23535 | -0.847814 | 9.11E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene23535 | 0.863727 | 2.02E-64 | -1.69E-46 |
| MS.gene054473 | MS.gene23535 | 0.833899 | 4.09E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene23535 | 0.81087 | 9.30E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene23535 | 0.830456 | 2.91E-55 | -1.69E-46 |
| MS.gene054983 | MS.gene23535 | 0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene23535 | 0.807232 | 5.59E-50 | -1.69E-46 |
| MS.gene055816 | MS.gene23535 | -0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene056979 | MS.gene23535 | 0.833005 | 6.84E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene23535 | 0.840925 | 6.48E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene23535 | 0.827799 | 1.28E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene23535 | 0.81487 | 1.24E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene23535 | 0.858993 | 5.62E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene23535 | 0.807105 | 5.95E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene23535 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene058833 | MS.gene23535 | 0.822355 | 2.48E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene23535 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene23535 | 0.811425 | 7.05E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene23535 | 0.858372 | 8.62E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene23535 | 0.805252 | 1.46E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene23535 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene060165 | MS.gene23535 | 0.813616 | 2.34E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene23535 | 0.804093 | 2.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23535.t1 | MTR_7g097210 | 96.624 | 711 | 24 | 0 | 1 | 711 | 27 | 737 | 0.0 | 1417 |
| MS.gene23535.t1 | MTR_7g097210 | 97.707 | 567 | 13 | 0 | 145 | 711 | 1 | 567 | 0.0 | 1139 |
| MS.gene23535.t1 | MTR_4g080823 | 55.846 | 727 | 301 | 10 | 1 | 710 | 36 | 759 | 0.0 | 805 |
| MS.gene23535.t1 | MTR_4g080890 | 55.983 | 727 | 300 | 10 | 1 | 710 | 27 | 750 | 0.0 | 803 |
| MS.gene23535.t1 | MTR_0651s0010 | 54.633 | 626 | 265 | 9 | 1 | 610 | 27 | 649 | 0.0 | 668 |
| MS.gene23535.t1 | MTR_1g075650 | 54.593 | 577 | 214 | 7 | 138 | 709 | 3 | 536 | 0.0 | 645 |
| MS.gene23535.t1 | MTR_5g025650 | 42.161 | 759 | 381 | 13 | 1 | 711 | 80 | 828 | 0.0 | 552 |
| MS.gene23535.t1 | MTR_8g072210 | 42.649 | 755 | 379 | 14 | 1 | 711 | 65 | 809 | 1.89e-179 | 532 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23535.t1 | AT4G28570 | 59.429 | 700 | 271 | 5 | 22 | 711 | 49 | 745 | 0.0 | 824 |
| MS.gene23535.t1 | AT4G28570 | 59.429 | 700 | 271 | 5 | 22 | 711 | 49 | 745 | 0.0 | 824 |
| MS.gene23535.t1 | AT3G23410 | 56.966 | 725 | 291 | 9 | 1 | 708 | 20 | 740 | 0.0 | 816 |
| MS.gene23535.t1 | AT3G23410 | 58.744 | 669 | 265 | 6 | 49 | 708 | 6 | 672 | 0.0 | 793 |
| MS.gene23535.t1 | AT1G03990 | 53.909 | 729 | 310 | 11 | 1 | 710 | 33 | 754 | 0.0 | 749 |
| MS.gene23535.t1 | AT4G19380 | 41.283 | 717 | 377 | 12 | 24 | 711 | 24 | 725 | 1.20e-169 | 504 |
| MS.gene23535.t1 | AT4G19380 | 41.283 | 717 | 377 | 12 | 24 | 711 | 66 | 767 | 4.29e-169 | 504 |
Find 162 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAGACTTCTTTGTTTAA+TGG | 0.132897 | 7.4:+13602617 | None:intergenic |
| TGGATTCTGTCATTCAAATT+AGG | 0.139329 | 7.4:-13601737 | MS.gene23535:CDS |
| AAGGAAGTCTTTAAGAATTT+TGG | 0.142745 | 7.4:-13599766 | MS.gene23535:CDS |
| CAAATTCTCTGAGATTTCTT+TGG | 0.197447 | 7.4:-13601660 | MS.gene23535:CDS |
| TTAATGGAATGGATGGAAAA+AGG | 0.221396 | 7.4:+13602633 | None:intergenic |
| TAGTTACTTTGGATTCTATT+TGG | 0.246811 | 7.4:+13600213 | None:intergenic |
| CTCACCAATGGCGTTGCTTC+TGG | 0.251725 | 7.4:+13601770 | None:intergenic |
| AAAATCTTAGAATTGGATTA+AGG | 0.256561 | 7.4:-13599785 | MS.gene23535:CDS |
| TTGTAGAACCGGAGATAAAA+AGG | 0.259716 | 7.4:-13600405 | MS.gene23535:CDS |
| CCATCCAGTTCAATTTGCTT+GGG | 0.271230 | 7.4:-13600105 | MS.gene23535:CDS |
| GGATTCTGTCATTCAAATTA+GGG | 0.293627 | 7.4:-13601736 | MS.gene23535:CDS |
| ATTATAGAAGCACCTGCTTT+AGG | 0.296752 | 7.4:-13599978 | MS.gene23535:CDS |
| TCATCCTTCTATACAACTTC+TGG | 0.300151 | 7.4:-13602581 | MS.gene23535:CDS |
| GACAGAGAAAATCTTAGAAT+TGG | 0.302166 | 7.4:-13599792 | MS.gene23535:CDS |
| AAGTTATGATTCCTCCTTCA+TGG | 0.302332 | 7.4:+13600042 | None:intergenic |
| CATTGGTGAGGTGGATTCTA+TGG | 0.309210 | 7.4:-13601757 | MS.gene23535:CDS |
| TGAAGGTTCCTTCCAATGTT+TGG | 0.313050 | 7.4:+13600131 | None:intergenic |
| AAAACAAATGGATACCTCTA+AGG | 0.315779 | 7.4:-13601601 | MS.gene23535:CDS |
| CTTCATCTTCAGTGACTTCA+AGG | 0.331159 | 7.4:+13600948 | None:intergenic |
| TCCATCCAGTTCAATTTGCT+TGG | 0.335666 | 7.4:-13600106 | MS.gene23535:CDS |
| CTTGATACTGTCACGGTTGT+CGG | 0.340575 | 7.4:-13599651 | MS.gene23535:CDS |
| GTGGAGGTACTGCTATAAAC+TGG | 0.344574 | 7.4:-13600682 | MS.gene23535:CDS |
| TTGTCTCTATTAGTCCTTCC+TGG | 0.345240 | 7.4:+13601017 | None:intergenic |
| AAAGTGATCATCCTAGAAAA+AGG | 0.349522 | 7.4:-13600830 | MS.gene23535:CDS |
| CTGTTGAGGTTGGAACTTAT+AGG | 0.352665 | 7.4:-13599731 | MS.gene23535:CDS |
| AATCCAATGTGGAAGGCAAT+AGG | 0.357171 | 7.4:-13601088 | MS.gene23535:CDS |
| AGGGATCAAAGAAGAAGAAT+TGG | 0.361473 | 7.4:-13599682 | MS.gene23535:CDS |
| TGTCTCTAACCAATGCAAAA+AGG | 0.362568 | 7.4:+13599871 | None:intergenic |
| CATTGTCCAAAGTTCACTTC+TGG | 0.369671 | 7.4:+13599617 | None:intergenic |
| TGCTGTTACGGTTGTAGAAC+CGG | 0.371663 | 7.4:-13600416 | MS.gene23535:CDS |
| GTTTAGTTCTGCACATCAAA+TGG | 0.373441 | 7.4:-13599595 | MS.gene23535:CDS |
| CGGAAAGGGTGTGAGAGAAT+TGG | 0.375092 | 7.4:-13600494 | MS.gene23535:CDS |
| TCCTGGAGAGGCCTCTTCTT+CGG | 0.378893 | 7.4:+13601034 | None:intergenic |
| AACCTCTCAGATGCATGTAT+TGG | 0.383483 | 7.4:-13602672 | None:intergenic |
| AACACAAACACCGCCCTTAG+AGG | 0.384539 | 7.4:+13601587 | None:intergenic |
| GGCCTTTCTCACTCAGGGAT+TGG | 0.385174 | 7.4:+13600969 | None:intergenic |
| CTCTTTGCTTGCATTGGAAG+TGG | 0.385444 | 7.4:-13601694 | MS.gene23535:CDS |
| ACATGATGAAATAGTTACTT+TGG | 0.389119 | 7.4:+13600202 | None:intergenic |
| GGATTGGATTAATGTAGAAT+TGG | 0.391272 | 7.4:+13600985 | None:intergenic |
| TTCTCAAGATTATTCTTCCT+TGG | 0.392128 | 7.4:-13600795 | MS.gene23535:CDS |
| GAGGGTGCAGTTGATGAGAA+TGG | 0.395238 | 7.4:-13599543 | MS.gene23535:CDS |
| GACTTCTTTGTTTAATGGAA+TGG | 0.401945 | 7.4:+13602622 | None:intergenic |
| TATTGCGGTTCGTGCTGTTA+CGG | 0.407724 | 7.4:-13600428 | MS.gene23535:CDS |
| TGATGAGAATGGAGAAAGTT+GGG | 0.414388 | 7.4:-13599532 | MS.gene23535:CDS |
| GTGGAACTCTTTGCTTGCAT+TGG | 0.416289 | 7.4:-13601700 | MS.gene23535:CDS |
| GCTTTCAAAATCAAGTTCTT+CGG | 0.428581 | 7.4:-13600514 | MS.gene23535:CDS |
| ATGAACGAGCTTTATGAATC+AGG | 0.431908 | 7.4:-13600761 | MS.gene23535:CDS |
| TTCTTATAGACTTGATCAAA+TGG | 0.433097 | 7.4:-13599814 | MS.gene23535:CDS |
| TCAGAGAATTTGAGAACAAA+AGG | 0.433449 | 7.4:+13601671 | None:intergenic |
| TTTGCATTGGTTAGAGACAT+AGG | 0.434303 | 7.4:-13599867 | MS.gene23535:CDS |
| CATTCCTTCTTAACAGAGTC+AGG | 0.435806 | 7.4:+13600641 | None:intergenic |
| TGCAACTCCTCCACCGCTAC+CGG | 0.435895 | 7.4:+13600880 | None:intergenic |
| TAAAATTGCAGAATCACTTA+AGG | 0.439016 | 7.4:-13599409 | MS.gene23535:CDS |
| ATAATAGAAGATGGAAAGAA+TGG | 0.440166 | 7.4:-13600305 | MS.gene23535:CDS |
| ATCCAATGTGGAAGGCAATA+GGG | 0.443972 | 7.4:-13601087 | MS.gene23535:CDS |
| AAAATCAAGTTCTTCGGAAA+GGG | 0.445304 | 7.4:-13600508 | MS.gene23535:CDS |
| AATGGTCAAAAGAAAACAAA+TGG | 0.451166 | 7.4:-13601613 | MS.gene23535:CDS |
| GATCAAAGAAGAAGAATTGG+AGG | 0.454354 | 7.4:-13599679 | MS.gene23535:CDS |
| AAATGCGATGCTGTCATTGT+TGG | 0.456225 | 7.4:-13600905 | MS.gene23535:CDS |
| GTATTAGTTCCATGGATCTC+AGG | 0.457639 | 7.4:-13599939 | MS.gene23535:CDS |
| ACCGAAGAAGAGGCCTCTCC+AGG | 0.458071 | 7.4:-13601035 | MS.gene23535:CDS |
| AGAACCAGAAGTTGTATAGA+AGG | 0.460921 | 7.4:+13602577 | None:intergenic |
| TAGCCCCAAGCAAATTGAAC+TGG | 0.461727 | 7.4:+13600101 | None:intergenic |
| CGACGGTAAAATGATGATCT+TGG | 0.462702 | 7.4:-13600720 | MS.gene23535:CDS |
| GCGGCGGGAGCTGTTGAGGT+TGG | 0.464809 | 7.4:-13599741 | MS.gene23535:CDS |
| GAGAAATTCATAATAGAAGA+TGG | 0.465338 | 7.4:-13600314 | MS.gene23535:CDS |
| CAAAATCAAGTTCTTCGGAA+AGG | 0.466408 | 7.4:-13600509 | MS.gene23535:CDS |
| TACCCTATTGCCTTCCACAT+TGG | 0.470515 | 7.4:+13601085 | None:intergenic |
| GTTGGTTCCGGTAGCGGTGG+AGG | 0.473180 | 7.4:-13600887 | MS.gene23535:CDS |
| TTGATGAGAATGGAGAAAGT+TGG | 0.475999 | 7.4:-13599533 | MS.gene23535:CDS |
| CAAATGGGAAGTTGTAGAAT+GGG | 0.480556 | 7.4:-13599579 | MS.gene23535:CDS |
| GTAGATTGAATGGTTACCAT+AGG | 0.483305 | 7.4:+13599450 | None:intergenic |
| CGCGGTCCAGAAGTGAACTT+TGG | 0.484300 | 7.4:-13599623 | MS.gene23535:CDS |
| GTCATTGTTGGTTCCGGTAG+CGG | 0.485398 | 7.4:-13600893 | MS.gene23535:CDS |
| ACTAATACTGAAAATGATCC+AGG | 0.486166 | 7.4:+13599954 | None:intergenic |
| TTGGTTGATGCTGTTGAAAA+CGG | 0.486532 | 7.4:-13600365 | MS.gene23535:CDS |
| TCAAATGGGAAGTTGTAGAA+TGG | 0.486816 | 7.4:-13599580 | MS.gene23535:CDS |
| ACAGTATGCTGTAGATTGAA+TGG | 0.487635 | 7.4:+13599440 | None:intergenic |
| TTCAAGGCCTTTCTCACTCA+GGG | 0.488063 | 7.4:+13600964 | None:intergenic |
| CATCCAGTTCAATTTGCTTG+GGG | 0.488374 | 7.4:-13600104 | MS.gene23535:CDS |
| ATCCAATCCCTGAGTGAGAA+AGG | 0.490284 | 7.4:-13600971 | MS.gene23535:CDS |
| TTTAGTTCTGCACATCAAAT+GGG | 0.491700 | 7.4:-13599594 | MS.gene23535:CDS |
| CTTCTATACTTTGTTCTCGA+GGG | 0.495918 | 7.4:-13601549 | MS.gene23535:intron |
| TCTTTGTTTAATGGAATGGA+TGG | 0.497110 | 7.4:+13602626 | None:intergenic |
| GGAGAAAGTTGGGAAGCAAA+AGG | 0.497184 | 7.4:-13599522 | MS.gene23535:CDS |
| TTGGTTAGAGACATAGGATC+AGG | 0.497758 | 7.4:-13599861 | MS.gene23535:CDS |
| TACAAAATCCAAACATTGGA+AGG | 0.499960 | 7.4:-13600139 | MS.gene23535:CDS |
| GAAAACATGACACACTTAAG+TGG | 0.500258 | 7.4:-13600071 | MS.gene23535:CDS |
| AAAGAACCTCATCAGGGAAT+GGG | 0.503886 | 7.4:+13602549 | None:intergenic |
| AACACCTGACTCTGTTAAGA+AGG | 0.504540 | 7.4:-13600645 | MS.gene23535:CDS |
| ACAAAGAGAAAGAATTGCTC+AGG | 0.508005 | 7.4:-13600281 | MS.gene23535:CDS |
| GATGCTGTCATTGTTGGTTC+CGG | 0.509168 | 7.4:-13600899 | MS.gene23535:CDS |
| CTCTGATTATCAATCTGCTA+TGG | 0.509218 | 7.4:-13600585 | MS.gene23535:CDS |
| TCAGGAGAAGTAAGAAGTGA+AGG | 0.509587 | 7.4:-13599843 | MS.gene23535:CDS |
| TCTTCTATACTTTGTTCTCG+AGG | 0.514200 | 7.4:-13601550 | MS.gene23535:CDS |
| TGCAGTTGGTGTTAACCCTA+TGG | 0.514783 | 7.4:-13599466 | MS.gene23535:CDS |
| ATTGAACTGGATGGAGATGA+AGG | 0.516885 | 7.4:+13600114 | None:intergenic |
| ATGGGTGAGAATGAAGAAGA+GGG | 0.517130 | 7.4:-13599561 | MS.gene23535:CDS |
| AAAAGTTGAAACCGAAGAAG+AGG | 0.517257 | 7.4:-13601045 | MS.gene23535:CDS |
| GAGAAAGTTGGGAAGCAAAA+GGG | 0.519118 | 7.4:-13599521 | MS.gene23535:CDS |
| TCAGTTCCCATTCCCTGATG+AGG | 0.520253 | 7.4:-13602555 | MS.gene23535:intron |
| TTGCTGCAGACAGATGTAGA+TGG | 0.521268 | 7.4:-13601115 | MS.gene23535:intron |
| AGTCCACTAGAAATCATTAG+AGG | 0.522212 | 7.4:+13600161 | None:intergenic |
| AACGGCGCAGTTATCCTCAC+TGG | 0.522905 | 7.4:-13600347 | MS.gene23535:CDS |
| AAAAGAACCTCATCAGGGAA+TGG | 0.523565 | 7.4:+13602548 | None:intergenic |
| CTTCAAGGCCTTTCTCACTC+AGG | 0.525253 | 7.4:+13600963 | None:intergenic |
| AATTGCTCAGGAGTGATAGC+TGG | 0.531778 | 7.4:-13600269 | MS.gene23535:CDS |
| GATTCAGTATGCAGAAGGAT+TGG | 0.536961 | 7.4:-13600563 | MS.gene23535:CDS |
| GGTAAAATGATGATCTTGGC+TGG | 0.539807 | 7.4:-13600716 | MS.gene23535:CDS |
| AAAAGGGTACTGACTCAACT+TGG | 0.540723 | 7.4:-13600388 | MS.gene23535:CDS |
| GGGTTAACACCAACTGCACT+AGG | 0.549107 | 7.4:+13599471 | None:intergenic |
| ATCTTGGCTGGCTCAACAGT+CGG | 0.554171 | 7.4:-13600704 | MS.gene23535:CDS |
| AAGCAACGCCATTGGTGAGG+TGG | 0.554657 | 7.4:-13601766 | MS.gene23535:CDS |
| AATGGGTGAGAATGAAGAAG+AGG | 0.555197 | 7.4:-13599562 | MS.gene23535:CDS |
| GGTTGCGGCGGGAGCTGTTG+AGG | 0.556378 | 7.4:-13599745 | MS.gene23535:CDS |
| GGACTACAAAATCCAAACAT+TGG | 0.561944 | 7.4:-13600143 | MS.gene23535:CDS |
| CTGACTCTGTTAAGAAGGAA+TGG | 0.564307 | 7.4:-13600640 | MS.gene23535:CDS |
| ATTGTTGGTTCCGGTAGCGG+TGG | 0.565231 | 7.4:-13600890 | MS.gene23535:CDS |
| GTTGGAACTTATAGGAGTGA+TGG | 0.565498 | 7.4:-13599723 | MS.gene23535:CDS |
| GCTGGCTCAACAGTCGGTGG+AGG | 0.567887 | 7.4:-13600698 | MS.gene23535:CDS |
| AAAGTAACTATTTCATCATG+TGG | 0.568702 | 7.4:-13600200 | MS.gene23535:CDS |
| TAGATTGAATGGTTACCATA+GGG | 0.569161 | 7.4:+13599451 | None:intergenic |
| GTTCATCGCTGAACTTTCCA+AGG | 0.572297 | 7.4:+13600778 | None:intergenic |
| TCTATTAGTCCTTCCTGGAG+AGG | 0.575506 | 7.4:+13601022 | None:intergenic |
| GTGGAAGGCAATAGGGTACA+AGG | 0.575769 | 7.4:-13601080 | MS.gene23535:CDS |
| TGCACCAGAAGCAACGCCAT+TGG | 0.577386 | 7.4:-13601774 | MS.gene23535:CDS |
| AATGATCCAGGTCCTAAAGC+AGG | 0.580745 | 7.4:+13599966 | None:intergenic |
| AAGTTGTATAGAAGGATGAG+AGG | 0.581610 | 7.4:+13602585 | None:intergenic |
| GCTGCAATTCTTGCAAACTC+AGG | 0.581743 | 7.4:-13600857 | MS.gene23535:CDS |
| CTATGGATTCAGTATGCAGA+AGG | 0.583898 | 7.4:-13600568 | MS.gene23535:CDS |
| GAAGCACCTGCTTTAGGACC+TGG | 0.586542 | 7.4:-13599972 | MS.gene23535:CDS |
| GGAGTTTCTTGATACTGTCA+CGG | 0.587716 | 7.4:-13599658 | MS.gene23535:CDS |
| TGGCTATAATCCAATGTGGA+AGG | 0.588681 | 7.4:-13601095 | MS.gene23535:CDS |
| GGGTACTGACTCAACTTGGT+TGG | 0.591888 | 7.4:-13600384 | MS.gene23535:CDS |
| ATATCGAGTCCTGAGATCCA+TGG | 0.595456 | 7.4:+13599930 | None:intergenic |
| GCTTCAGAAGATCATTATTG+CGG | 0.597873 | 7.4:-13600443 | MS.gene23535:CDS |
| GAGTGATAGCTGGAACAAGT+TGG | 0.601974 | 7.4:-13600259 | MS.gene23535:CDS |
| CATAGAATCCACCTCACCAA+TGG | 0.602414 | 7.4:+13601758 | None:intergenic |
| AAAGGGTTGTATGTGTGTGA+TGG | 0.608484 | 7.4:-13599504 | MS.gene23535:CDS |
| AAACAAATGGATACCTCTAA+GGG | 0.609941 | 7.4:-13601600 | MS.gene23535:CDS |
| CCCAAGCAAATTGAACTGGA+TGG | 0.610780 | 7.4:+13600105 | None:intergenic |
| GATACTGTCACGGTTGTCGG+TGG | 0.614491 | 7.4:-13599648 | MS.gene23535:CDS |
| ACTCGATATGAAAGACAGAA+TGG | 0.616506 | 7.4:-13599916 | MS.gene23535:CDS |
| AAGAAGAGGCCTCTCCAGGA+AGG | 0.616993 | 7.4:-13601031 | MS.gene23535:CDS |
| TGATAGCTGGAACAAGTTGG+AGG | 0.618232 | 7.4:-13600256 | MS.gene23535:CDS |
| TTGGCTGGCTCAACAGTCGG+TGG | 0.619706 | 7.4:-13600701 | MS.gene23535:CDS |
| CCTCCTCTAATGATTTCTAG+TGG | 0.623746 | 7.4:-13600164 | MS.gene23535:CDS |
| TGGAGGTACTGCTATAAACT+GGG | 0.626757 | 7.4:-13600681 | MS.gene23535:CDS |
| TTAAGTGGTAATAACCATGA+AGG | 0.627164 | 7.4:-13600056 | MS.gene23535:CDS |
| AACGAGCTTTATGAATCAGG+TGG | 0.631552 | 7.4:-13600758 | MS.gene23535:CDS |
| AGTGGTAATAACCATGAAGG+AGG | 0.637889 | 7.4:-13600053 | MS.gene23535:CDS |
| TAATCAGAGCTTGTGAAAAG+CGG | 0.638436 | 7.4:+13600599 | None:intergenic |
| CAGAAGCAACGCCATTGGTG+AGG | 0.639836 | 7.4:-13601769 | MS.gene23535:CDS |
| TCACGGTTGTCGGTGGACCG+CGG | 0.645745 | 7.4:-13599641 | MS.gene23535:CDS |
| CCACTAGAAATCATTAGAGG+AGG | 0.647396 | 7.4:+13600164 | None:intergenic |
| GGAATCATGCCAACTCTCGA+CGG | 0.650023 | 7.4:-13600737 | MS.gene23535:CDS |
| CAAAGTTCACTTCTGGACCG+CGG | 0.689159 | 7.4:+13599624 | None:intergenic |
| CAAATGGATACCTCTAAGGG+CGG | 0.696692 | 7.4:-13601597 | MS.gene23535:CDS |
| TAGATGGCTATAATCCAATG+TGG | 0.704268 | 7.4:-13601099 | MS.gene23535:CDS |
| TGTGACAGATAAATGCAACA+AGG | 0.712817 | 7.4:-13600540 | MS.gene23535:CDS |
| TCTCAGCTCTACATCCAGTG+AGG | 0.723767 | 7.4:+13600333 | None:intergenic |
| GAAGGCAATAGGGTACAAGG+TGG | 0.747351 | 7.4:-13601077 | MS.gene23535:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTTTTAATAAAAACAT+TGG | - | chr7.4:13600906-13600925 | MS.gene23535:CDS | 10.0% |
| !!! | TCATTTTTAATAAAAACATT+GGG | - | chr7.4:13600907-13600926 | MS.gene23535:CDS | 10.0% |
| !! | AGATTAAAAATGGATAAAAT+TGG | + | chr7.4:13599544-13599563 | None:intergenic | 15.0% |
| !! | GCATTATTAAAATGATAAAA+TGG | + | chr7.4:13600553-13600572 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCATATGAGTATT+AGG | - | chr7.4:13600235-13600254 | MS.gene23535:CDS | 15.0% |
| !! | AAAATCTTAGAATTGGATTA+AGG | - | chr7.4:13602278-13602297 | MS.gene23535:intron | 20.0% |
| !! | AAATTGGTCATTTAAAGAAA+TGG | - | chr7.4:13600824-13600843 | MS.gene23535:CDS | 20.0% |
| !! | ATATGATCTACATACAAAAT+TGG | - | chr7.4:13600808-13600827 | MS.gene23535:CDS | 20.0% |
| !! | ATCTTTCATTAACATTTGAA+AGG | - | chr7.4:13599977-13599996 | MS.gene23535:CDS | 20.0% |
| !! | ATTATTGAACTAAACTAGTA+AGG | + | chr7.4:13600179-13600198 | None:intergenic | 20.0% |
| !!! | AGACTTTATTTATGTTCAAA+AGG | + | chr7.4:13600090-13600109 | None:intergenic | 20.0% |
| !!! | AGATTAGGCTTTTTTTTTAA+TGG | + | chr7.4:13599823-13599842 | None:intergenic | 20.0% |
| !!! | TCATTTTAATAATGCTCATA+TGG | - | chr7.4:13600558-13600577 | MS.gene23535:CDS | 20.0% |
| ! | AAAATCCTGTATCAATGTTT+CGG | - | chr7.4:13599741-13599760 | MS.gene23535:CDS | 25.0% |
| ! | AAAGTAACTATTTCATCATG+TGG | - | chr7.4:13601863-13601882 | MS.gene23535:intron | 25.0% |
| ! | AATGGTCAAAAGAAAACAAA+TGG | - | chr7.4:13600450-13600469 | MS.gene23535:CDS | 25.0% |
| ! | ACATGATGAAATAGTTACTT+TGG | + | chr7.4:13601864-13601883 | None:intergenic | 25.0% |
| ! | ACTCATTGAATAACCTAAAA+TGG | + | chr7.4:13600641-13600660 | None:intergenic | 25.0% |
| ! | ATAATAGAAGATGGAAAGAA+TGG | - | chr7.4:13601758-13601777 | MS.gene23535:CDS | 25.0% |
| ! | CTAAATATCAGTGAAAGATT+AGG | + | chr7.4:13599838-13599857 | None:intergenic | 25.0% |
| ! | CTCATTGAATAACCTAAAAT+GGG | + | chr7.4:13600640-13600659 | None:intergenic | 25.0% |
| ! | GACAAAAAATCAAATGTGAA+GGG | - | chr7.4:13602362-13602381 | MS.gene23535:intron | 25.0% |
| ! | GAGAAATTCATAATAGAAGA+TGG | - | chr7.4:13601749-13601768 | MS.gene23535:CDS | 25.0% |
| ! | TAAAATTGCAGAATCACTTA+AGG | - | chr7.4:13602654-13602673 | MS.gene23535:CDS | 25.0% |
| ! | TATCTATCATGTCATATAAG+TGG | - | chr7.4:13599584-13599603 | MS.gene23535:CDS | 25.0% |
| ! | TCTTTCACTGATATTTAGAA+AGG | - | chr7.4:13599840-13599859 | MS.gene23535:CDS | 25.0% |
| ! | TTCTTATAGACTTGATCAAA+TGG | - | chr7.4:13602249-13602268 | MS.gene23535:intron | 25.0% |
| !! | AAGCGGTAGTTTATATTTTT+CGG | + | chr7.4:13601450-13601469 | None:intergenic | 25.0% |
| !! | TAGTTACTTTGGATTCTATT+TGG | + | chr7.4:13601853-13601872 | None:intergenic | 25.0% |
| !!! | AAGGAAGTCTTTAAGAATTT+TGG | - | chr7.4:13602297-13602316 | MS.gene23535:intron | 25.0% |
| !!! | GAGAAGAAATTTTCAAGAAA+TGG | - | chr7.4:13600432-13600451 | MS.gene23535:CDS | 25.0% |
| !!! | GATTTTCATCAGCTTTATAA+CGG | + | chr7.4:13600870-13600889 | None:intergenic | 25.0% |
| AAAACAAATGGATACCTCTA+AGG | - | chr7.4:13600462-13600481 | MS.gene23535:CDS | 30.0% | |
| AAAATCAAGTTCTTCGGAAA+GGG | - | chr7.4:13601555-13601574 | MS.gene23535:CDS | 30.0% | |
| AAACAAATGGATACCTCTAA+GGG | - | chr7.4:13600463-13600482 | MS.gene23535:CDS | 30.0% | |
| AAAGTGATCATCCTAGAAAA+AGG | - | chr7.4:13601233-13601252 | MS.gene23535:intron | 30.0% | |
| ACTAATACTGAAAATGATCC+AGG | + | chr7.4:13602112-13602131 | None:intergenic | 30.0% | |
| GAAAAAGCAAAACATGATGT+TGG | + | chr7.4:13600057-13600076 | None:intergenic | 30.0% | |
| GACAGAGAAAATCTTAGAAT+TGG | - | chr7.4:13602271-13602290 | MS.gene23535:intron | 30.0% | |
| GCTTTCAAAATCAAGTTCTT+CGG | - | chr7.4:13601549-13601568 | MS.gene23535:intron | 30.0% | |
| GGACAAAAAATCAAATGTGA+AGG | - | chr7.4:13602361-13602380 | MS.gene23535:intron | 30.0% | |
| GGATTCTGTCATTCAAATTA+GGG | - | chr7.4:13600327-13600346 | MS.gene23535:CDS | 30.0% | |
| GGATTGGATTAATGTAGAAT+TGG | + | chr7.4:13601081-13601100 | None:intergenic | 30.0% | |
| TAATGGAATGGATGGAAAAA+GGG | + | chr7.4:13599432-13599451 | None:intergenic | 30.0% | |
| TACAAAATCCAAACATTGGA+AGG | - | chr7.4:13601924-13601943 | MS.gene23535:intron | 30.0% | |
| TAGATTGAATGGTTACCATA+GGG | + | chr7.4:13602615-13602634 | None:intergenic | 30.0% | |
| TCAGAGAATTTGAGAACAAA+AGG | + | chr7.4:13600395-13600414 | None:intergenic | 30.0% | |
| TCTGTATCAGTATTTCATAG+TGG | - | chr7.4:13599771-13599790 | MS.gene23535:CDS | 30.0% | |
| TGGATTCTGTCATTCAAATT+AGG | - | chr7.4:13600326-13600345 | MS.gene23535:CDS | 30.0% | |
| TTAAGTGGTAATAACCATGA+AGG | - | chr7.4:13602007-13602026 | MS.gene23535:intron | 30.0% | |
| TTAATGGAATGGATGGAAAA+AGG | + | chr7.4:13599433-13599452 | None:intergenic | 30.0% | |
| TTCTCAAGATTATTCTTCCT+TGG | - | chr7.4:13601268-13601287 | MS.gene23535:intron | 30.0% | |
| TTTCACGGTTAAACCAAAAT+GGG | + | chr7.4:13600761-13600780 | None:intergenic | 30.0% | |
| ! | AACATTATGTCACCCATTTT+AGG | - | chr7.4:13600625-13600644 | MS.gene23535:CDS | 30.0% |
| ! | CAAAATACTCTCCTTTTTCT+AGG | + | chr7.4:13601247-13601266 | None:intergenic | 30.0% |
| ! | CATTTTCAGTATTAGTTCCA+TGG | - | chr7.4:13602116-13602135 | MS.gene23535:intron | 30.0% |
| ! | GACTTCTTTGTTTAATGGAA+TGG | + | chr7.4:13599444-13599463 | None:intergenic | 30.0% |
| ! | GGTGCTTCTATAATGATTTT+TGG | + | chr7.4:13602079-13602098 | None:intergenic | 30.0% |
| ! | TCTTTGTTTAATGGAATGGA+TGG | + | chr7.4:13599440-13599459 | None:intergenic | 30.0% |
| ! | TGAGAGACTTCTTTGTTTAA+TGG | + | chr7.4:13599449-13599468 | None:intergenic | 30.0% |
| ! | TTAAGTGTGTCATGTTTTCA+GGG | + | chr7.4:13601991-13602010 | None:intergenic | 30.0% |
| !! | ATGATGTTGGTAACGAATTT+CGG | + | chr7.4:13600044-13600063 | None:intergenic | 30.0% |
| !! | CAAATTCTCTGAGATTTCTT+TGG | - | chr7.4:13600403-13600422 | MS.gene23535:CDS | 30.0% |
| !! | CCAGAAAAGTGTTTGAAAAA+GGG | - | chr7.4:13600685-13600704 | MS.gene23535:CDS | 30.0% |
| !! | TCCAGAAAAGTGTTTGAAAA+AGG | - | chr7.4:13600684-13600703 | MS.gene23535:CDS | 30.0% |
| !! | TTTAGTTCTGCACATCAAAT+GGG | - | chr7.4:13602469-13602488 | MS.gene23535:intron | 30.0% |
| !!! | GTCTTTAAGAATTTTGGTTG+CGG | - | chr7.4:13602303-13602322 | MS.gene23535:intron | 30.0% |
| !!! | TTCTATAATGATTTTTGGCG+TGG | + | chr7.4:13602074-13602093 | None:intergenic | 30.0% |
| AAAAGTTGAAACCGAAGAAG+AGG | - | chr7.4:13601018-13601037 | MS.gene23535:CDS | 35.0% | |
| AAGTTATGATTCCTCCTTCA+TGG | + | chr7.4:13602024-13602043 | None:intergenic | 35.0% | |
| AAGTTGTATAGAAGGATGAG+AGG | + | chr7.4:13599481-13599500 | None:intergenic | 35.0% | |
| AATGGAATGGATGGAAAAAG+GGG | + | chr7.4:13599431-13599450 | None:intergenic | 35.0% | |
| ACAAAGAGAAAGAATTGCTC+AGG | - | chr7.4:13601782-13601801 | MS.gene23535:CDS | 35.0% | |
| ACAGTATGCTGTAGATTGAA+TGG | + | chr7.4:13602626-13602645 | None:intergenic | 35.0% | |
| ACTCGATATGAAAGACAGAA+TGG | - | chr7.4:13602147-13602166 | MS.gene23535:intron | 35.0% | |
| AGAACCAGAAGTTGTATAGA+AGG | + | chr7.4:13599489-13599508 | None:intergenic | 35.0% | |
| AGGGATCAAAGAAGAAGAAT+TGG | - | chr7.4:13602381-13602400 | MS.gene23535:intron | 35.0% | |
| AGTCCACTAGAAATCATTAG+AGG | + | chr7.4:13601905-13601924 | None:intergenic | 35.0% | |
| CAAAATCAAGTTCTTCGGAA+AGG | - | chr7.4:13601554-13601573 | MS.gene23535:CDS | 35.0% | |
| CAAATGGGAAGTTGTAGAAT+GGG | - | chr7.4:13602484-13602503 | MS.gene23535:intron | 35.0% | |
| CTCTGATTATCAATCTGCTA+TGG | - | chr7.4:13601478-13601497 | MS.gene23535:intron | 35.0% | |
| CTTCTATACTTTGTTCTCGA+GGG | - | chr7.4:13600514-13600533 | MS.gene23535:CDS | 35.0% | |
| GAAAACATGACACACTTAAG+TGG | - | chr7.4:13601992-13602011 | MS.gene23535:intron | 35.0% | |
| GATCAAAGAAGAAGAATTGG+AGG | - | chr7.4:13602384-13602403 | MS.gene23535:intron | 35.0% | |
| GCTTCAGAAGATCATTATTG+CGG | - | chr7.4:13601620-13601639 | MS.gene23535:CDS | 35.0% | |
| GGACTACAAAATCCAAACAT+TGG | - | chr7.4:13601920-13601939 | MS.gene23535:intron | 35.0% | |
| GTAGATTGAATGGTTACCAT+AGG | + | chr7.4:13602616-13602635 | None:intergenic | 35.0% | |
| GTTTCACGGTTAAACCAAAA+TGG | + | chr7.4:13600762-13600781 | None:intergenic | 35.0% | |
| TAATCAGAGCTTGTGAAAAG+CGG | + | chr7.4:13601467-13601486 | None:intergenic | 35.0% | |
| TAGATGGCTATAATCCAATG+TGG | - | chr7.4:13600964-13600983 | MS.gene23535:CDS | 35.0% | |
| TCAAATGGGAAGTTGTAGAA+TGG | - | chr7.4:13602483-13602502 | MS.gene23535:intron | 35.0% | |
| TCACATGTTTACCAGTTTCA+CGG | + | chr7.4:13600776-13600795 | None:intergenic | 35.0% | |
| TCATCCTTCTATACAACTTC+TGG | - | chr7.4:13599482-13599501 | MS.gene23535:CDS | 35.0% | |
| TCTTCTATACTTTGTTCTCG+AGG | - | chr7.4:13600513-13600532 | MS.gene23535:CDS | 35.0% | |
| TGATGAGAATGGAGAAAGTT+GGG | - | chr7.4:13602531-13602550 | MS.gene23535:intron | 35.0% | |
| TGTAGAACCGGAGATAAAAA+GGG | - | chr7.4:13601659-13601678 | MS.gene23535:CDS | 35.0% | |
| TGTCTCTAACCAATGCAAAA+AGG | + | chr7.4:13602195-13602214 | None:intergenic | 35.0% | |
| TGTGACAGATAAATGCAACA+AGG | - | chr7.4:13601523-13601542 | MS.gene23535:intron | 35.0% | |
| TTGATGAGAATGGAGAAAGT+TGG | - | chr7.4:13602530-13602549 | MS.gene23535:intron | 35.0% | |
| TTGTAGAACCGGAGATAAAA+AGG | - | chr7.4:13601658-13601677 | MS.gene23535:CDS | 35.0% | |
| ! | AACTGCTAACCTTTTTGCAT+TGG | - | chr7.4:13602183-13602202 | MS.gene23535:intron | 35.0% |
| ! | ATGAACGAGCTTTATGAATC+AGG | - | chr7.4:13601302-13601321 | MS.gene23535:intron | 35.0% |
| ! | CTTAAGTGTGTCATGTTTTC+AGG | + | chr7.4:13601992-13602011 | None:intergenic | 35.0% |
| ! | TTGGTTGATGCTGTTGAAAA+CGG | - | chr7.4:13601698-13601717 | MS.gene23535:CDS | 35.0% |
| !! | ATTATAGAAGCACCTGCTTT+AGG | - | chr7.4:13602085-13602104 | MS.gene23535:intron | 35.0% |
| !! | GTTTAGTTCTGCACATCAAA+TGG | - | chr7.4:13602468-13602487 | MS.gene23535:intron | 35.0% |
| !! | TTTGCATTGGTTAGAGACAT+AGG | - | chr7.4:13602196-13602215 | MS.gene23535:intron | 35.0% |
| !!! | CCCTTTTTCAAACACTTTTC+TGG | + | chr7.4:13600688-13600707 | None:intergenic | 35.0% |
| !!! | TTAGGGACACTTTTTCTTTG+TGG | - | chr7.4:13600344-13600363 | MS.gene23535:CDS | 35.0% |
| !!! | TTTAAGAATTTTGGTTGCGG+CGG | - | chr7.4:13602306-13602325 | MS.gene23535:intron | 35.0% |
| !!! | TTTTGGTTTAACCGTGAAAC+TGG | - | chr7.4:13600762-13600781 | MS.gene23535:CDS | 35.0% |
| AAAAGAACCTCATCAGGGAA+TGG | + | chr7.4:13599518-13599537 | None:intergenic | 40.0% | |
| AAAGAACCTCATCAGGGAAT+GGG | + | chr7.4:13599517-13599536 | None:intergenic | 40.0% | |
| AAAGGGTTGTATGTGTGTGA+TGG | - | chr7.4:13602559-13602578 | MS.gene23535:CDS | 40.0% | |
| AAATGCGATGCTGTCATTGT+TGG | - | chr7.4:13601158-13601177 | MS.gene23535:intron | 40.0% | |
| AACACCTGACTCTGTTAAGA+AGG | - | chr7.4:13601418-13601437 | MS.gene23535:intron | 40.0% | |
| AACTACAACTGCTATGCAGT+CGG | - | chr7.4:13599863-13599882 | MS.gene23535:CDS | 40.0% | |
| AATCCAATGTGGAAGGCAAT+AGG | - | chr7.4:13600975-13600994 | MS.gene23535:CDS | 40.0% | |
| AATGGGTGAGAATGAAGAAG+AGG | - | chr7.4:13602501-13602520 | MS.gene23535:intron | 40.0% | |
| ACAGGTATTCAACACATGTG+TGG | - | chr7.4:13599651-13599670 | MS.gene23535:CDS | 40.0% | |
| ACATCTGTCTGCAGCAATTA+GGG | + | chr7.4:13600945-13600964 | None:intergenic | 40.0% | |
| ACTGATACAGACACTGACAA+TGG | + | chr7.4:13599929-13599948 | None:intergenic | 40.0% | |
| AGTGGTAATAACCATGAAGG+AGG | - | chr7.4:13602010-13602029 | MS.gene23535:intron | 40.0% | |
| ATCCAATGTGGAAGGCAATA+GGG | - | chr7.4:13600976-13600995 | MS.gene23535:CDS | 40.0% | |
| ATGGGTGAGAATGAAGAAGA+GGG | - | chr7.4:13602502-13602521 | MS.gene23535:intron | 40.0% | |
| ATTCAACACATGTGTGGTGT+TGG | - | chr7.4:13599657-13599676 | MS.gene23535:CDS | 40.0% | |
| ATTGAACTGGATGGAGATGA+AGG | + | chr7.4:13601952-13601971 | None:intergenic | 40.0% | |
| CATTCCTTCTTAACAGAGTC+AGG | + | chr7.4:13601425-13601444 | None:intergenic | 40.0% | |
| CATTGTCCAAAGTTCACTTC+TGG | + | chr7.4:13602449-13602468 | None:intergenic | 40.0% | |
| CCACTAGAAATCATTAGAGG+AGG | + | chr7.4:13601902-13601921 | None:intergenic | 40.0% | |
| CGACGGTAAAATGATGATCT+TGG | - | chr7.4:13601343-13601362 | MS.gene23535:intron | 40.0% | |
| CTATGGATTCAGTATGCAGA+AGG | - | chr7.4:13601495-13601514 | MS.gene23535:intron | 40.0% | |
| CTGACTCTGTTAAGAAGGAA+TGG | - | chr7.4:13601423-13601442 | MS.gene23535:intron | 40.0% | |
| CTGTTGAGGTTGGAACTTAT+AGG | - | chr7.4:13602332-13602351 | MS.gene23535:intron | 40.0% | |
| CTTCATCTTCAGTGACTTCA+AGG | + | chr7.4:13601118-13601137 | None:intergenic | 40.0% | |
| GAGAAAGTTGGGAAGCAAAA+GGG | - | chr7.4:13602542-13602561 | MS.gene23535:intron | 40.0% | |
| GATTCAGTATGCAGAAGGAT+TGG | - | chr7.4:13601500-13601519 | MS.gene23535:intron | 40.0% | |
| GGAGTTTCTTGATACTGTCA+CGG | - | chr7.4:13602405-13602424 | MS.gene23535:intron | 40.0% | |
| GGTAAAATGATGATCTTGGC+TGG | - | chr7.4:13601347-13601366 | MS.gene23535:intron | 40.0% | |
| GGTGAAAAAGAACCTCATCA+GGG | + | chr7.4:13599523-13599542 | None:intergenic | 40.0% | |
| GTATTAGTTCCATGGATCTC+AGG | - | chr7.4:13602124-13602143 | MS.gene23535:intron | 40.0% | |
| GTCAAAAATGTCGATGCTAC+AGG | + | chr7.4:13599633-13599652 | None:intergenic | 40.0% | |
| GTTGGAACTTATAGGAGTGA+TGG | - | chr7.4:13602340-13602359 | MS.gene23535:intron | 40.0% | |
| TACATCTGTCTGCAGCAATT+AGG | + | chr7.4:13600946-13600965 | None:intergenic | 40.0% | |
| TCAGGAGAAGTAAGAAGTGA+AGG | - | chr7.4:13602220-13602239 | MS.gene23535:intron | 40.0% | |
| TGAAGGTTCCTTCCAATGTT+TGG | + | chr7.4:13601935-13601954 | None:intergenic | 40.0% | |
| TGGCTATAATCCAATGTGGA+AGG | - | chr7.4:13600968-13600987 | MS.gene23535:CDS | 40.0% | |
| TGGTGAAAAAGAACCTCATC+AGG | + | chr7.4:13599524-13599543 | None:intergenic | 40.0% | |
| TTGGTTAGAGACATAGGATC+AGG | - | chr7.4:13602202-13602221 | MS.gene23535:intron | 40.0% | |
| TTGTCTCTATTAGTCCTTCC+TGG | + | chr7.4:13601049-13601068 | None:intergenic | 40.0% | |
| ! | AACGAGCTTTATGAATCAGG+TGG | - | chr7.4:13601305-13601324 | MS.gene23535:intron | 40.0% |
| ! | ATCATTTTACCGTCGAGAGT+TGG | + | chr7.4:13601338-13601357 | None:intergenic | 40.0% |
| ! | CATCCAGTTCAATTTGCTTG+GGG | - | chr7.4:13601959-13601978 | MS.gene23535:intron | 40.0% |
| ! | CCATCCAGTTCAATTTGCTT+GGG | - | chr7.4:13601958-13601977 | MS.gene23535:intron | 40.0% |
| ! | CCTCCTCTAATGATTTCTAG+TGG | - | chr7.4:13601899-13601918 | MS.gene23535:intron | 40.0% |
| ! | GTCAGTACCCTTTTTATCTC+CGG | + | chr7.4:13601669-13601688 | None:intergenic | 40.0% |
| ! | TCCATCCAGTTCAATTTGCT+TGG | - | chr7.4:13601957-13601976 | MS.gene23535:intron | 40.0% |
| ! | TCGAAACACAGTTCCCATTT+TGG | - | chr7.4:13600745-13600764 | MS.gene23535:CDS | 40.0% |
| !! | AAAAGGGTACTGACTCAACT+TGG | - | chr7.4:13601675-13601694 | MS.gene23535:CDS | 40.0% |
| !! | TGGAGGTACTGCTATAAACT+GGG | - | chr7.4:13601382-13601401 | MS.gene23535:intron | 40.0% |
| !!! | CTTTTTTTCTGCAAGAGCAG+AGG | - | chr7.4:13600151-13600170 | MS.gene23535:CDS | 40.0% |
| !!! | GTAGCATCGACATTTTTGAC+AGG | - | chr7.4:13599633-13599652 | MS.gene23535:CDS | 40.0% |
| !!! | TTAAGAATTTTGGTTGCGGC+GGG | - | chr7.4:13602307-13602326 | MS.gene23535:intron | 40.0% |
| AACTGAAACTGCTGTGCAGT+CGG | - | chr7.4:13600000-13600019 | MS.gene23535:CDS | 45.0% | |
| AATGATCCAGGTCCTAAAGC+AGG | + | chr7.4:13602100-13602119 | None:intergenic | 45.0% | |
| AATTGCTCAGGAGTGATAGC+TGG | - | chr7.4:13601794-13601813 | MS.gene23535:CDS | 45.0% | |
| ATATCGAGTCCTGAGATCCA+TGG | + | chr7.4:13602136-13602155 | None:intergenic | 45.0% | |
| ATCCAATCCCTGAGTGAGAA+AGG | - | chr7.4:13601092-13601111 | MS.gene23535:CDS | 45.0% | |
| CATAGAATCCACCTCACCAA+TGG | + | chr7.4:13600308-13600327 | None:intergenic | 45.0% | |
| CATGTGTCAGTGTCATGTCT+CGG | + | chr7.4:13599687-13599706 | None:intergenic | 45.0% | |
| CCCAAGCAAATTGAACTGGA+TGG | + | chr7.4:13601961-13601980 | None:intergenic | 45.0% | |
| CGACACCGAAACATTGATAC+AGG | + | chr7.4:13599749-13599768 | None:intergenic | 45.0% | |
| CTCTTTGCTTGCATTGGAAG+TGG | - | chr7.4:13600369-13600388 | MS.gene23535:CDS | 45.0% | |
| CTTGATACTGTCACGGTTGT+CGG | - | chr7.4:13602412-13602431 | MS.gene23535:intron | 45.0% | |
| GAGTGATAGCTGGAACAAGT+TGG | - | chr7.4:13601804-13601823 | MS.gene23535:CDS | 45.0% | |
| GCTGCAATTCTTGCAAACTC+AGG | - | chr7.4:13601206-13601225 | MS.gene23535:intron | 45.0% | |
| GGAGAAAGTTGGGAAGCAAA+AGG | - | chr7.4:13602541-13602560 | MS.gene23535:intron | 45.0% | |
| GTGGAACTCTTTGCTTGCAT+TGG | - | chr7.4:13600363-13600382 | MS.gene23535:CDS | 45.0% | |
| GTTCATCGCTGAACTTTCCA+AGG | + | chr7.4:13601288-13601307 | None:intergenic | 45.0% | |
| TACCCTATTGCCTTCCACAT+TGG | + | chr7.4:13600981-13601000 | None:intergenic | 45.0% | |
| TAGCCCCAAGCAAATTGAAC+TGG | + | chr7.4:13601965-13601984 | None:intergenic | 45.0% | |
| TCTATTAGTCCTTCCTGGAG+AGG | + | chr7.4:13601044-13601063 | None:intergenic | 45.0% | |
| TGCTGTTACGGTTGTAGAAC+CGG | - | chr7.4:13601647-13601666 | MS.gene23535:CDS | 45.0% | |
| TTCAAGGCCTTTCTCACTCA+GGG | + | chr7.4:13601102-13601121 | None:intergenic | 45.0% | |
| TTGCTGCAGACAGATGTAGA+TGG | - | chr7.4:13600948-13600967 | MS.gene23535:CDS | 45.0% | |
| ! | AGTGTTTTGCCTAGTGCAGT+TGG | - | chr7.4:13602583-13602602 | MS.gene23535:CDS | 45.0% |
| ! | CAAATGGATACCTCTAAGGG+CGG | - | chr7.4:13600466-13600485 | MS.gene23535:CDS | 45.0% |
| ! | CATTGGTGAGGTGGATTCTA+TGG | - | chr7.4:13600306-13600325 | MS.gene23535:CDS | 45.0% |
| ! | TATTGCGGTTCGTGCTGTTA+CGG | - | chr7.4:13601635-13601654 | MS.gene23535:CDS | 45.0% |
| ! | TGATAGCTGGAACAAGTTGG+AGG | - | chr7.4:13601807-13601826 | MS.gene23535:CDS | 45.0% |
| !! | GATGCTGTCATTGTTGGTTC+CGG | - | chr7.4:13601164-13601183 | MS.gene23535:intron | 45.0% |
| !! | GTGGAGGTACTGCTATAAAC+TGG | - | chr7.4:13601381-13601400 | MS.gene23535:intron | 45.0% |
| !! | TGCAGTTGGTGTTAACCCTA+TGG | - | chr7.4:13602597-13602616 | MS.gene23535:CDS | 45.0% |
| !! | AAAAAAAAATAGATTAAAAA+TGG | + | chr7.4:13599554-13599573 | None:intergenic | 5.0% |
| AACACAAACACCGCCCTTAG+AGG | + | chr7.4:13600479-13600498 | None:intergenic | 50.0% | |
| AACTGCTATGCAGTCGGAGA+CGG | - | chr7.4:13599869-13599888 | MS.gene23535:CDS | 50.0% | |
| CAAAGTTCACTTCTGGACCG+CGG | + | chr7.4:13602442-13602461 | None:intergenic | 50.0% | |
| CTTCAAGGCCTTTCTCACTC+AGG | + | chr7.4:13601103-13601122 | None:intergenic | 50.0% | |
| GAAGGCAATAGGGTACAAGG+TGG | - | chr7.4:13600986-13601005 | MS.gene23535:CDS | 50.0% | |
| GGAATCATGCCAACTCTCGA+CGG | - | chr7.4:13601326-13601345 | MS.gene23535:intron | 50.0% | |
| GGGTTAACACCAACTGCACT+AGG | + | chr7.4:13602595-13602614 | None:intergenic | 50.0% | |
| GTGGAAGGCAATAGGGTACA+AGG | - | chr7.4:13600983-13601002 | MS.gene23535:CDS | 50.0% | |
| TCAGTTCCCATTCCCTGATG+AGG | - | chr7.4:13599508-13599527 | MS.gene23535:CDS | 50.0% | |
| TCTCAGCTCTACATCCAGTG+AGG | + | chr7.4:13601733-13601752 | None:intergenic | 50.0% | |
| ! | ATCTTGGCTGGCTCAACAGT+CGG | - | chr7.4:13601359-13601378 | MS.gene23535:intron | 50.0% |
| ! | CGGAAAGGGTGTGAGAGAAT+TGG | - | chr7.4:13601569-13601588 | MS.gene23535:CDS | 50.0% |
| !! | GAGGGTGCAGTTGATGAGAA+TGG | - | chr7.4:13602520-13602539 | MS.gene23535:intron | 50.0% |
| !! | GGGTACTGACTCAACTTGGT+TGG | - | chr7.4:13601679-13601698 | MS.gene23535:CDS | 50.0% |
| !! | GTCATTGTTGGTTCCGGTAG+CGG | - | chr7.4:13601170-13601189 | MS.gene23535:intron | 50.0% |
| AACGGCGCAGTTATCCTCAC+TGG | - | chr7.4:13601716-13601735 | MS.gene23535:CDS | 55.0% | |
| AAGAAGAGGCCTCTCCAGGA+AGG | - | chr7.4:13601032-13601051 | MS.gene23535:CDS | 55.0% | |
| AAGCAACGCCATTGGTGAGG+TGG | - | chr7.4:13600297-13600316 | MS.gene23535:CDS | 55.0% | |
| CAGAAGCAACGCCATTGGTG+AGG | - | chr7.4:13600294-13600313 | MS.gene23535:CDS | 55.0% | |
| CGCGGTCCAGAAGTGAACTT+TGG | - | chr7.4:13602440-13602459 | MS.gene23535:intron | 55.0% | |
| CTCACCAATGGCGTTGCTTC+TGG | + | chr7.4:13600296-13600315 | None:intergenic | 55.0% | |
| GATACTGTCACGGTTGTCGG+TGG | - | chr7.4:13602415-13602434 | MS.gene23535:intron | 55.0% | |
| GGCCTTTCTCACTCAGGGAT+TGG | + | chr7.4:13601097-13601116 | None:intergenic | 55.0% | |
| TCCTGGAGAGGCCTCTTCTT+CGG | + | chr7.4:13601032-13601051 | None:intergenic | 55.0% | |
| TGAAACTGCTGTGCAGTCGG+AGG | - | chr7.4:13600003-13600022 | MS.gene23535:CDS | 55.0% | |
| TGCACCAGAAGCAACGCCAT+TGG | - | chr7.4:13600289-13600308 | MS.gene23535:CDS | 55.0% | |
| !! | ATTGTTGGTTCCGGTAGCGG+TGG | - | chr7.4:13601173-13601192 | MS.gene23535:intron | 55.0% |
| !! | GAAGCACCTGCTTTAGGACC+TGG | - | chr7.4:13602091-13602110 | MS.gene23535:intron | 55.0% |
| ACCGAAGAAGAGGCCTCTCC+AGG | - | chr7.4:13601028-13601047 | MS.gene23535:CDS | 60.0% | |
| AGTCGGAGACGGCGTAGATG+TGG | - | chr7.4:13599880-13599899 | MS.gene23535:CDS | 60.0% | |
| TGCAACTCCTCCACCGCTAC+CGG | + | chr7.4:13601186-13601205 | None:intergenic | 60.0% | |
| ! | GTCGGAGGCGTAGGGACAAT+TGG | - | chr7.4:13600018-13600037 | MS.gene23535:CDS | 60.0% |
| ! | TTGGCTGGCTCAACAGTCGG+TGG | - | chr7.4:13601362-13601381 | MS.gene23535:intron | 60.0% |
| TCACGGTTGTCGGTGGACCG+CGG | - | chr7.4:13602422-13602441 | MS.gene23535:intron | 65.0% | |
| ! | GCTGGCTCAACAGTCGGTGG+AGG | - | chr7.4:13601365-13601384 | MS.gene23535:intron | 65.0% |
| ! | GCTGTGCAGTCGGAGGCGTA+GGG | - | chr7.4:13600010-13600029 | MS.gene23535:CDS | 65.0% |
| ! | GTTGGTTCCGGTAGCGGTGG+AGG | - | chr7.4:13601176-13601195 | MS.gene23535:intron | 65.0% |
| ! | TGCTGTGCAGTCGGAGGCGT+AGG | - | chr7.4:13600009-13600028 | MS.gene23535:CDS | 65.0% |
| GCGGCGGGAGCTGTTGAGGT+TGG | - | chr7.4:13602322-13602341 | MS.gene23535:intron | 70.0% | |
| GGTTGCGGCGGGAGCTGTTG+AGG | - | chr7.4:13602318-13602337 | MS.gene23535:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 13599401 | 13602684 | 13599401 | ID=MS.gene23535 |
| chr7.4 | mRNA | 13599401 | 13602684 | 13599401 | ID=MS.gene23535.t1;Parent=MS.gene23535 |
| chr7.4 | exon | 13602556 | 13602684 | 13602556 | ID=MS.gene23535.t1.exon1;Parent=MS.gene23535.t1 |
| chr7.4 | CDS | 13602556 | 13602684 | 13602556 | ID=cds.MS.gene23535.t1;Parent=MS.gene23535.t1 |
| chr7.4 | exon | 13601550 | 13601828 | 13601550 | ID=MS.gene23535.t1.exon2;Parent=MS.gene23535.t1 |
| chr7.4 | CDS | 13601550 | 13601828 | 13601550 | ID=cds.MS.gene23535.t1;Parent=MS.gene23535.t1 |
| chr7.4 | exon | 13599401 | 13601128 | 13599401 | ID=MS.gene23535.t1.exon3;Parent=MS.gene23535.t1 |
| chr7.4 | CDS | 13599401 | 13601128 | 13599401 | ID=cds.MS.gene23535.t1;Parent=MS.gene23535.t1 |
| Gene Sequence |
| Protein sequence |
