Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24108.t1 | XP_003589551.1 | 96.2 | 318 | 11 | 1 | 1 | 317 | 1 | 318 | 4.10E-169 | 604 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24108.t1 | Q43872 | 73.0 | 311 | 82 | 1 | 7 | 317 | 9 | 317 | 6.0e-129 | 461.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24108.t1 | G7I8C1 | 96.2 | 318 | 11 | 1 | 1 | 317 | 1 | 318 | 2.9e-169 | 604.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene24108 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene050329 | MS.gene24108 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene24108 | 0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene24108 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene24108 | 0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene24108 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene24108 | 0.803597 | 3.23E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene24108 | 0.833193 | 6.14E-56 | -1.69E-46 |
| MS.gene054742 | MS.gene24108 | 0.843797 | 1.12E-58 | -1.69E-46 |
| MS.gene056330 | MS.gene24108 | 0.830863 | 2.31E-55 | -1.69E-46 |
| MS.gene056680 | MS.gene24108 | 0.800481 | 1.41E-48 | -1.69E-46 |
| MS.gene056920 | MS.gene24108 | 0.848925 | 4.49E-60 | -1.69E-46 |
| MS.gene056922 | MS.gene24108 | 0.829082 | 6.28E-55 | -1.69E-46 |
| MS.gene056923 | MS.gene24108 | 0.82419 | 9.23E-54 | -1.69E-46 |
| MS.gene056924 | MS.gene24108 | 0.821857 | 3.23E-53 | -1.69E-46 |
| MS.gene057261 | MS.gene24108 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene24108 | 0.824972 | 6.04E-54 | -1.69E-46 |
| MS.gene059891 | MS.gene24108 | 0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene24108 | 0.801922 | 7.16E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene24108 | 0.835021 | 2.14E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062216 | MS.gene24108 | PPI |
| MS.gene004925 | MS.gene24108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24108.t1 | MTR_1g025980 | 96.226 | 318 | 11 | 1 | 1 | 317 | 1 | 318 | 0.0 | 636 |
| MS.gene24108.t1 | MTR_8g075100 | 73.913 | 299 | 77 | 1 | 18 | 316 | 21 | 318 | 9.46e-166 | 464 |
| MS.gene24108.t1 | MTR_5g022870 | 69.620 | 316 | 95 | 1 | 1 | 316 | 1 | 315 | 8.96e-162 | 454 |
| MS.gene24108.t1 | MTR_1g101830 | 54.516 | 310 | 139 | 2 | 9 | 316 | 12 | 321 | 9.73e-124 | 357 |
| MS.gene24108.t1 | MTR_1g077000 | 49.320 | 294 | 137 | 4 | 23 | 313 | 39 | 323 | 2.36e-97 | 290 |
| MS.gene24108.t1 | MTR_0155s0040 | 46.284 | 296 | 147 | 4 | 21 | 313 | 25 | 311 | 2.55e-92 | 277 |
| MS.gene24108.t1 | MTR_2g008710 | 44.479 | 317 | 163 | 4 | 7 | 313 | 8 | 321 | 2.52e-90 | 273 |
| MS.gene24108.t1 | MTR_7g107520 | 45.215 | 303 | 159 | 4 | 18 | 316 | 20 | 319 | 1.83e-89 | 270 |
| MS.gene24108.t1 | MTR_3g092990 | 43.671 | 316 | 172 | 4 | 7 | 316 | 10 | 325 | 8.77e-87 | 263 |
| MS.gene24108.t1 | MTR_2g088770 | 42.994 | 314 | 172 | 5 | 9 | 316 | 12 | 324 | 3.80e-86 | 262 |
| MS.gene24108.t1 | MTR_1g009750 | 44.237 | 321 | 165 | 9 | 7 | 316 | 10 | 327 | 5.70e-84 | 256 |
| MS.gene24108.t1 | MTR_1g086320 | 44.648 | 327 | 169 | 9 | 1 | 316 | 7 | 332 | 4.35e-81 | 249 |
| MS.gene24108.t1 | MTR_7g029030 | 43.574 | 319 | 164 | 8 | 5 | 313 | 4 | 316 | 6.45e-81 | 248 |
| MS.gene24108.t1 | MTR_1g086490 | 43.114 | 334 | 171 | 9 | 1 | 316 | 7 | 339 | 2.52e-80 | 248 |
| MS.gene24108.t1 | MTR_4g114210 | 40.557 | 323 | 177 | 6 | 1 | 314 | 1 | 317 | 1.42e-79 | 245 |
| MS.gene24108.t1 | MTR_5g017850 | 43.478 | 299 | 166 | 3 | 7 | 302 | 10 | 308 | 6.38e-79 | 243 |
| MS.gene24108.t1 | MTR_1g038680 | 43.854 | 301 | 160 | 7 | 25 | 316 | 31 | 331 | 6.51e-79 | 243 |
| MS.gene24108.t1 | MTR_5g017860 | 42.089 | 316 | 177 | 4 | 7 | 316 | 10 | 325 | 1.33e-78 | 243 |
| MS.gene24108.t1 | MTR_3g094650 | 42.947 | 319 | 167 | 7 | 3 | 313 | 7 | 318 | 1.42e-78 | 242 |
| MS.gene24108.t1 | MTR_4g095450 | 42.500 | 320 | 166 | 8 | 7 | 316 | 12 | 323 | 1.94e-78 | 242 |
| MS.gene24108.t1 | MTR_4g030890 | 42.295 | 305 | 172 | 4 | 15 | 316 | 92 | 395 | 2.08e-78 | 245 |
| MS.gene24108.t1 | MTR_4g125940 | 43.438 | 320 | 167 | 8 | 7 | 316 | 13 | 328 | 2.22e-78 | 242 |
| MS.gene24108.t1 | MTR_4g127670 | 43.144 | 299 | 159 | 5 | 23 | 313 | 24 | 319 | 3.59e-78 | 241 |
| MS.gene24108.t1 | MTR_5g074860 | 42.593 | 324 | 165 | 9 | 7 | 317 | 10 | 325 | 4.30e-78 | 241 |
| MS.gene24108.t1 | MTR_4g046713 | 39.564 | 321 | 185 | 4 | 3 | 316 | 7 | 325 | 4.84e-78 | 241 |
| MS.gene24108.t1 | MTR_2g029560 | 41.195 | 318 | 178 | 6 | 8 | 317 | 9 | 325 | 4.85e-77 | 239 |
| MS.gene24108.t1 | MTR_3g466200 | 40.752 | 319 | 172 | 7 | 3 | 313 | 7 | 316 | 1.44e-76 | 237 |
| MS.gene24108.t1 | MTR_5g083860 | 42.357 | 314 | 167 | 6 | 10 | 316 | 18 | 324 | 2.78e-76 | 236 |
| MS.gene24108.t1 | MTR_4g029180 | 44.595 | 296 | 148 | 8 | 26 | 313 | 30 | 317 | 3.97e-76 | 236 |
| MS.gene24108.t1 | MTR_5g016010 | 39.441 | 322 | 183 | 6 | 5 | 316 | 9 | 328 | 7.72e-76 | 236 |
| MS.gene24108.t1 | MTR_3g072190 | 42.236 | 322 | 169 | 7 | 1 | 313 | 1 | 314 | 1.17e-75 | 235 |
| MS.gene24108.t1 | MTR_5g021060 | 43.564 | 303 | 165 | 5 | 17 | 313 | 24 | 326 | 1.76e-75 | 235 |
| MS.gene24108.t1 | MTR_2g029750 | 42.193 | 301 | 167 | 4 | 23 | 316 | 29 | 329 | 5.03e-75 | 234 |
| MS.gene24108.t1 | MTR_4g029170 | 42.763 | 304 | 160 | 6 | 17 | 313 | 21 | 317 | 7.14e-75 | 233 |
| MS.gene24108.t1 | MTR_5g074970 | 41.720 | 314 | 167 | 6 | 9 | 313 | 16 | 322 | 1.23e-74 | 233 |
| MS.gene24108.t1 | MTR_2g029730 | 41.956 | 317 | 175 | 6 | 8 | 316 | 10 | 325 | 2.91e-74 | 232 |
| MS.gene24108.t1 | MTR_2g029860 | 39.748 | 317 | 184 | 4 | 8 | 317 | 14 | 330 | 4.62e-74 | 232 |
| MS.gene24108.t1 | MTR_2g028980 | 42.424 | 297 | 164 | 4 | 27 | 316 | 33 | 329 | 5.75e-74 | 232 |
| MS.gene24108.t1 | MTR_4g087965 | 40.000 | 315 | 179 | 6 | 11 | 315 | 30 | 344 | 6.19e-74 | 231 |
| MS.gene24108.t1 | MTR_4g122640 | 42.345 | 307 | 167 | 7 | 17 | 316 | 32 | 335 | 7.03e-74 | 231 |
| MS.gene24108.t1 | MTR_1g054205 | 38.820 | 322 | 187 | 7 | 1 | 313 | 2 | 322 | 8.92e-74 | 230 |
| MS.gene24108.t1 | MTR_1g115900 | 37.423 | 326 | 186 | 7 | 1 | 316 | 3 | 320 | 2.13e-73 | 229 |
| MS.gene24108.t1 | MTR_2g084090 | 40.468 | 299 | 161 | 6 | 26 | 316 | 28 | 317 | 2.67e-73 | 229 |
| MS.gene24108.t1 | MTR_3g092990 | 40.506 | 316 | 171 | 5 | 7 | 316 | 10 | 314 | 4.32e-73 | 228 |
| MS.gene24108.t1 | MTR_7g086870 | 37.874 | 301 | 166 | 6 | 23 | 315 | 22 | 309 | 5.30e-73 | 228 |
| MS.gene24108.t1 | MTR_2g084080 | 39.877 | 326 | 176 | 8 | 1 | 316 | 1 | 316 | 6.29e-73 | 228 |
| MS.gene24108.t1 | MTR_2g029815 | 42.623 | 305 | 160 | 6 | 23 | 316 | 29 | 329 | 7.12e-73 | 229 |
| MS.gene24108.t1 | MTR_7g086820 | 39.731 | 297 | 169 | 5 | 23 | 315 | 20 | 310 | 7.43e-73 | 228 |
| MS.gene24108.t1 | MTR_2g084010 | 40.498 | 321 | 170 | 9 | 7 | 316 | 7 | 317 | 7.62e-73 | 228 |
| MS.gene24108.t1 | MTR_4g031140 | 40.333 | 300 | 175 | 4 | 20 | 316 | 25 | 323 | 1.60e-72 | 228 |
| MS.gene24108.t1 | MTR_2g084020 | 41.667 | 300 | 156 | 8 | 26 | 316 | 28 | 317 | 1.95e-72 | 226 |
| MS.gene24108.t1 | MTR_7g093370 | 40.190 | 316 | 179 | 7 | 7 | 313 | 53 | 367 | 2.30e-72 | 228 |
| MS.gene24108.t1 | MTR_2g029830 | 41.391 | 302 | 170 | 4 | 23 | 317 | 28 | 329 | 6.79e-72 | 226 |
| MS.gene24108.t1 | MTR_3g094670 | 42.320 | 319 | 169 | 7 | 3 | 313 | 7 | 318 | 7.88e-72 | 225 |
| MS.gene24108.t1 | MTR_6g027440 | 37.025 | 316 | 181 | 7 | 7 | 313 | 4 | 310 | 1.19e-71 | 224 |
| MS.gene24108.t1 | MTR_2g084110 | 39.264 | 326 | 178 | 8 | 1 | 316 | 1 | 316 | 1.33e-71 | 224 |
| MS.gene24108.t1 | MTR_2g084000 | 39.024 | 328 | 178 | 9 | 1 | 316 | 1 | 318 | 4.53e-71 | 223 |
| MS.gene24108.t1 | MTR_1g009750 | 41.066 | 319 | 161 | 11 | 7 | 316 | 10 | 310 | 9.86e-71 | 222 |
| MS.gene24108.t1 | MTR_4g125940 | 45.956 | 272 | 134 | 7 | 55 | 316 | 5 | 273 | 1.18e-70 | 221 |
| MS.gene24108.t1 | MTR_8g062780 | 41.049 | 324 | 172 | 8 | 7 | 314 | 1 | 321 | 3.04e-70 | 221 |
| MS.gene24108.t1 | MTR_2g040000 | 40.798 | 326 | 176 | 8 | 5 | 316 | 8 | 330 | 3.90e-70 | 221 |
| MS.gene24108.t1 | MTR_5g049280 | 40.132 | 304 | 172 | 5 | 23 | 316 | 33 | 336 | 3.91e-70 | 221 |
| MS.gene24108.t1 | MTR_1g090760 | 38.679 | 318 | 183 | 9 | 8 | 314 | 11 | 327 | 5.24e-70 | 221 |
| MS.gene24108.t1 | MTR_2g029820 | 40.063 | 317 | 182 | 5 | 7 | 316 | 14 | 329 | 5.71e-70 | 221 |
| MS.gene24108.t1 | MTR_8g076820 | 40.789 | 304 | 174 | 4 | 19 | 316 | 26 | 329 | 8.22e-70 | 220 |
| MS.gene24108.t1 | MTR_2g008160 | 39.535 | 301 | 171 | 4 | 21 | 313 | 22 | 319 | 9.02e-70 | 220 |
| MS.gene24108.t1 | MTR_7g072480 | 38.629 | 321 | 181 | 7 | 2 | 316 | 5 | 315 | 1.08e-69 | 219 |
| MS.gene24108.t1 | MTR_2g437770 | 39.145 | 304 | 174 | 4 | 17 | 316 | 44 | 340 | 2.76e-69 | 219 |
| MS.gene24108.t1 | MTR_7g072510 | 37.855 | 317 | 182 | 7 | 8 | 317 | 4 | 312 | 3.55e-69 | 218 |
| MS.gene24108.t1 | MTR_7g026990 | 39.016 | 305 | 173 | 5 | 17 | 316 | 25 | 321 | 5.72e-69 | 218 |
| MS.gene24108.t1 | MTR_3g105790 | 38.095 | 315 | 182 | 5 | 7 | 313 | 9 | 318 | 7.46e-69 | 218 |
| MS.gene24108.t1 | MTR_4g029200 | 39.458 | 332 | 177 | 8 | 1 | 316 | 14 | 337 | 7.68e-69 | 218 |
| MS.gene24108.t1 | MTR_5g074760 | 40.000 | 320 | 174 | 8 | 7 | 316 | 9 | 320 | 7.82e-69 | 218 |
| MS.gene24108.t1 | MTR_2g029740 | 39.597 | 298 | 171 | 6 | 27 | 316 | 33 | 329 | 9.21e-69 | 218 |
| MS.gene24108.t1 | MTR_5g074710 | 40.244 | 328 | 176 | 9 | 1 | 316 | 1 | 320 | 1.13e-68 | 217 |
| MS.gene24108.t1 | MTR_3g094630 | 42.006 | 319 | 170 | 7 | 3 | 313 | 7 | 318 | 1.27e-68 | 217 |
| MS.gene24108.t1 | MTR_2g008730 | 38.924 | 316 | 157 | 4 | 7 | 313 | 9 | 297 | 1.85e-68 | 216 |
| MS.gene24108.t1 | MTR_2g029850 | 39.319 | 323 | 176 | 8 | 7 | 316 | 14 | 329 | 2.05e-68 | 217 |
| MS.gene24108.t1 | MTR_4g083710 | 38.532 | 327 | 183 | 8 | 1 | 316 | 4 | 323 | 4.29e-68 | 216 |
| MS.gene24108.t1 | MTR_5g074740 | 39.634 | 328 | 178 | 9 | 1 | 316 | 1 | 320 | 5.63e-68 | 215 |
| MS.gene24108.t1 | MTR_1g022970 | 41.503 | 306 | 170 | 6 | 19 | 316 | 42 | 346 | 1.11e-67 | 215 |
| MS.gene24108.t1 | MTR_2g029910 | 38.944 | 303 | 177 | 5 | 23 | 317 | 30 | 332 | 2.40e-67 | 214 |
| MS.gene24108.t1 | MTR_4g133800 | 40.134 | 299 | 165 | 5 | 24 | 316 | 42 | 332 | 3.89e-67 | 213 |
| MS.gene24108.t1 | MTR_2g029800 | 38.486 | 317 | 187 | 5 | 7 | 316 | 14 | 329 | 5.21e-67 | 214 |
| MS.gene24108.t1 | MTR_5g014100 | 41.776 | 304 | 160 | 8 | 27 | 316 | 30 | 330 | 1.74e-66 | 212 |
| MS.gene24108.t1 | MTR_0286s0010 | 37.618 | 319 | 187 | 8 | 7 | 316 | 18 | 333 | 3.71e-66 | 211 |
| MS.gene24108.t1 | MTR_6g008075 | 37.618 | 319 | 187 | 8 | 7 | 316 | 18 | 333 | 3.71e-66 | 211 |
| MS.gene24108.t1 | MTR_4g132490 | 35.938 | 320 | 195 | 6 | 1 | 314 | 9 | 324 | 3.94e-66 | 211 |
| MS.gene24108.t1 | MTR_3g466180 | 41.401 | 314 | 171 | 5 | 10 | 317 | 17 | 323 | 6.01e-66 | 210 |
| MS.gene24108.t1 | MTR_4g074995 | 37.538 | 325 | 176 | 8 | 1 | 316 | 1 | 307 | 7.68e-66 | 209 |
| MS.gene24108.t1 | MTR_4g029190 | 39.731 | 297 | 165 | 5 | 27 | 316 | 50 | 339 | 1.15e-65 | 210 |
| MS.gene24108.t1 | MTR_3g467600 | 40.187 | 321 | 174 | 8 | 7 | 316 | 10 | 323 | 2.00e-65 | 209 |
| MS.gene24108.t1 | MTR_6g043280 | 36.513 | 304 | 178 | 6 | 19 | 316 | 37 | 331 | 8.53e-63 | 202 |
| MS.gene24108.t1 | MTR_6g043240 | 40.066 | 302 | 162 | 9 | 22 | 316 | 41 | 330 | 8.60e-62 | 200 |
| MS.gene24108.t1 | MTR_2g099175 | 38.000 | 300 | 173 | 7 | 23 | 313 | 36 | 331 | 1.83e-61 | 199 |
| MS.gene24108.t1 | MTR_3g072190 | 44.094 | 254 | 128 | 6 | 66 | 313 | 2 | 247 | 2.67e-60 | 193 |
| MS.gene24108.t1 | MTR_2g078610 | 35.758 | 330 | 176 | 8 | 20 | 313 | 73 | 402 | 6.25e-59 | 194 |
| MS.gene24108.t1 | MTR_4g074990 | 35.625 | 320 | 177 | 7 | 5 | 316 | 6 | 304 | 1.15e-58 | 191 |
| MS.gene24108.t1 | MTR_2g067440 | 35.347 | 331 | 179 | 5 | 20 | 316 | 57 | 386 | 1.42e-58 | 193 |
| MS.gene24108.t1 | MTR_2g078280 | 35.759 | 316 | 170 | 5 | 20 | 302 | 73 | 388 | 2.00e-58 | 192 |
| MS.gene24108.t1 | MTR_2g077990 | 35.758 | 330 | 176 | 8 | 20 | 313 | 73 | 402 | 2.63e-58 | 193 |
| MS.gene24108.t1 | MTR_6g043460 | 36.486 | 296 | 176 | 4 | 23 | 313 | 36 | 324 | 5.78e-58 | 190 |
| MS.gene24108.t1 | MTR_4g074980 | 35.127 | 316 | 168 | 7 | 7 | 316 | 9 | 293 | 1.90e-56 | 184 |
| MS.gene24108.t1 | MTR_4g074980 | 38.645 | 251 | 143 | 5 | 7 | 252 | 9 | 253 | 2.29e-55 | 181 |
| MS.gene24108.t1 | MTR_2g029830 | 41.245 | 257 | 144 | 4 | 68 | 317 | 5 | 261 | 2.50e-55 | 181 |
| MS.gene24108.t1 | MTR_2g008160 | 37.631 | 287 | 136 | 6 | 21 | 302 | 22 | 270 | 6.06e-55 | 181 |
| MS.gene24108.t1 | MTR_1g066710 | 34.323 | 303 | 187 | 5 | 21 | 316 | 25 | 322 | 5.93e-53 | 176 |
| MS.gene24108.t1 | MTR_5g074860 | 36.111 | 324 | 147 | 9 | 7 | 317 | 10 | 286 | 6.23e-53 | 175 |
| MS.gene24108.t1 | MTR_2g008160 | 47.126 | 174 | 90 | 1 | 21 | 194 | 22 | 193 | 1.77e-52 | 171 |
| MS.gene24108.t1 | MTR_0147s0010 | 33.962 | 318 | 173 | 5 | 23 | 316 | 77 | 381 | 2.60e-51 | 174 |
| MS.gene24108.t1 | MTR_4g132110 | 33.022 | 321 | 187 | 7 | 10 | 315 | 19 | 326 | 8.24e-51 | 171 |
| MS.gene24108.t1 | MTR_5g033470 | 32.248 | 307 | 186 | 7 | 23 | 313 | 73 | 373 | 4.15e-50 | 171 |
| MS.gene24108.t1 | MTR_1g066380 | 33.663 | 303 | 189 | 5 | 21 | 316 | 25 | 322 | 7.99e-50 | 168 |
| MS.gene24108.t1 | MTR_4g132110 | 33.129 | 326 | 185 | 9 | 10 | 315 | 19 | 331 | 1.32e-48 | 166 |
| MS.gene24108.t1 | MTR_3g105790 | 40.000 | 240 | 134 | 4 | 82 | 313 | 5 | 242 | 6.02e-48 | 161 |
| MS.gene24108.t1 | MTR_2g067450 | 34.505 | 313 | 178 | 8 | 20 | 316 | 8 | 309 | 6.69e-47 | 160 |
| MS.gene24108.t1 | MTR_1g066640 | 32.343 | 303 | 193 | 5 | 21 | 316 | 25 | 322 | 1.81e-46 | 160 |
| MS.gene24108.t1 | MTR_1g066680 | 31.190 | 311 | 185 | 7 | 21 | 316 | 25 | 321 | 1.30e-45 | 157 |
| MS.gene24108.t1 | MTR_5g074700 | 39.474 | 228 | 111 | 8 | 96 | 316 | 6 | 213 | 1.11e-38 | 136 |
| MS.gene24108.t1 | MTR_1g066380 | 33.852 | 257 | 158 | 5 | 67 | 316 | 3 | 254 | 1.20e-38 | 137 |
| MS.gene24108.t1 | MTR_3g072210 | 41.489 | 188 | 95 | 6 | 133 | 313 | 55 | 234 | 1.98e-38 | 136 |
| MS.gene24108.t1 | MTR_2g029880 | 37.037 | 189 | 103 | 5 | 134 | 316 | 9 | 187 | 1.04e-31 | 118 |
| MS.gene24108.t1 | MTR_7g086790 | 34.375 | 192 | 106 | 3 | 70 | 261 | 17 | 188 | 1.88e-29 | 111 |
| MS.gene24108.t1 | MTR_7g072490 | 33.906 | 233 | 91 | 6 | 69 | 299 | 2 | 173 | 1.20e-27 | 107 |
| MS.gene24108.t1 | MTR_3g072260 | 40.299 | 134 | 76 | 2 | 1 | 130 | 1 | 134 | 8.71e-26 | 100 |
| MS.gene24108.t1 | MTR_4g114220 | 56.627 | 83 | 27 | 2 | 50 | 132 | 30 | 103 | 3.39e-25 | 99.0 |
| MS.gene24108.t1 | MTR_1g089005 | 38.931 | 131 | 72 | 2 | 11 | 133 | 1 | 131 | 4.14e-24 | 96.3 |
| MS.gene24108.t1 | MTR_2g077980 | 28.975 | 283 | 154 | 8 | 75 | 313 | 1 | 280 | 1.23e-23 | 98.6 |
| MS.gene24108.t1 | MTR_2g078560 | 30.631 | 222 | 119 | 6 | 127 | 313 | 95 | 316 | 5.84e-22 | 94.4 |
| MS.gene24108.t1 | MTR_6g048160 | 57.143 | 70 | 27 | 1 | 62 | 131 | 22 | 88 | 2.77e-21 | 86.7 |
| MS.gene24108.t1 | MTR_5g058120 | 34.969 | 163 | 88 | 5 | 156 | 313 | 6 | 155 | 7.58e-19 | 84.7 |
| MS.gene24108.t1 | MTR_7g086810 | 34.746 | 118 | 52 | 1 | 23 | 140 | 6 | 98 | 1.11e-18 | 84.0 |
| MS.gene24108.t1 | MTR_3g462850 | 35.000 | 140 | 83 | 3 | 185 | 316 | 9 | 148 | 2.84e-18 | 80.5 |
| MS.gene24108.t1 | MTR_3g107060 | 33.918 | 171 | 90 | 6 | 55 | 214 | 106 | 264 | 2.18e-16 | 79.0 |
| MS.gene24108.t1 | MTR_7g086785 | 37.805 | 82 | 51 | 0 | 68 | 149 | 3 | 84 | 1.78e-15 | 72.4 |
| MS.gene24108.t1 | MTR_6g071110 | 44.565 | 92 | 40 | 2 | 90 | 181 | 81 | 161 | 2.31e-15 | 72.8 |
| MS.gene24108.t1 | MTR_4g031040 | 33.333 | 126 | 60 | 4 | 132 | 253 | 25 | 130 | 9.79e-14 | 67.8 |
| MS.gene24108.t1 | MTR_4g012865 | 39.437 | 71 | 43 | 0 | 23 | 93 | 77 | 147 | 3.57e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24108.t1 | AT5G42180 | 72.990 | 311 | 82 | 1 | 7 | 317 | 9 | 317 | 2.36e-173 | 483 |
| MS.gene24108.t1 | AT5G51890 | 52.941 | 323 | 143 | 4 | 1 | 316 | 1 | 321 | 6.45e-123 | 355 |
| MS.gene24108.t1 | AT4G33420 | 46.326 | 313 | 155 | 4 | 5 | 313 | 18 | 321 | 4.88e-92 | 277 |
| MS.gene24108.t1 | AT4G33420 | 46.326 | 313 | 155 | 4 | 5 | 313 | 65 | 368 | 3.11e-91 | 276 |
| MS.gene24108.t1 | AT1G05260 | 44.340 | 318 | 169 | 6 | 5 | 315 | 7 | 323 | 2.36e-90 | 273 |
| MS.gene24108.t1 | AT3G21770 | 43.791 | 306 | 165 | 5 | 16 | 315 | 22 | 326 | 6.83e-87 | 264 |
| MS.gene24108.t1 | AT2G41480 | 44.753 | 324 | 157 | 6 | 7 | 316 | 12 | 327 | 1.20e-86 | 263 |
| MS.gene24108.t1 | AT5G64120 | 43.667 | 300 | 160 | 6 | 21 | 316 | 33 | 327 | 4.67e-86 | 262 |
| MS.gene24108.t1 | AT4G36430 | 44.295 | 298 | 150 | 6 | 27 | 313 | 34 | 326 | 3.92e-83 | 254 |
| MS.gene24108.t1 | AT4G11290 | 40.979 | 327 | 179 | 8 | 2 | 316 | 1 | 325 | 4.09e-83 | 254 |
| MS.gene24108.t1 | AT5G15180 | 43.366 | 309 | 150 | 6 | 22 | 316 | 31 | 328 | 1.40e-82 | 253 |
| MS.gene24108.t1 | AT1G05240 | 42.715 | 302 | 156 | 6 | 23 | 313 | 26 | 321 | 1.52e-81 | 250 |
| MS.gene24108.t1 | AT1G05250 | 42.715 | 302 | 156 | 6 | 23 | 313 | 26 | 321 | 1.52e-81 | 250 |
| MS.gene24108.t1 | AT2G18980 | 40.373 | 322 | 180 | 5 | 3 | 316 | 5 | 322 | 2.91e-81 | 249 |
| MS.gene24108.t1 | AT3G01190 | 42.202 | 327 | 158 | 8 | 1 | 313 | 8 | 317 | 3.14e-80 | 246 |
| MS.gene24108.t1 | AT4G37530 | 43.648 | 307 | 160 | 7 | 18 | 313 | 21 | 325 | 6.19e-80 | 246 |
| MS.gene24108.t1 | AT4G30170 | 41.503 | 306 | 167 | 5 | 19 | 316 | 23 | 324 | 9.63e-80 | 245 |
| MS.gene24108.t1 | AT5G14130 | 44.373 | 311 | 162 | 7 | 11 | 313 | 19 | 326 | 2.08e-79 | 245 |
| MS.gene24108.t1 | AT5G14130 | 44.231 | 312 | 163 | 7 | 11 | 314 | 60 | 368 | 5.69e-79 | 245 |
| MS.gene24108.t1 | AT2G39040 | 45.574 | 305 | 154 | 7 | 23 | 316 | 46 | 349 | 8.46e-79 | 244 |
| MS.gene24108.t1 | AT5G39580 | 41.486 | 323 | 175 | 8 | 1 | 316 | 3 | 318 | 1.12e-78 | 243 |
| MS.gene24108.t1 | AT3G49960 | 42.462 | 325 | 170 | 8 | 1 | 313 | 6 | 325 | 1.70e-78 | 243 |
| MS.gene24108.t1 | AT5G06720 | 40.625 | 320 | 177 | 7 | 6 | 313 | 11 | 329 | 2.11e-78 | 242 |
| MS.gene24108.t1 | AT5G19890 | 43.034 | 323 | 169 | 7 | 5 | 316 | 8 | 326 | 2.63e-78 | 242 |
| MS.gene24108.t1 | AT4G16270 | 44.816 | 299 | 159 | 6 | 23 | 316 | 50 | 347 | 3.91e-78 | 242 |
| MS.gene24108.t1 | AT4G37520 | 43.522 | 301 | 158 | 6 | 23 | 313 | 27 | 325 | 9.04e-78 | 241 |
| MS.gene24108.t1 | AT5G17820 | 39.482 | 309 | 173 | 6 | 10 | 313 | 10 | 309 | 5.52e-77 | 238 |
| MS.gene24108.t1 | AT2G18140 | 43.051 | 295 | 160 | 6 | 26 | 313 | 38 | 331 | 2.18e-76 | 237 |
| MS.gene24108.t1 | AT4G31760 | 40.127 | 314 | 179 | 4 | 9 | 316 | 15 | 325 | 2.61e-76 | 237 |
| MS.gene24108.t1 | AT2G18150 | 42.177 | 294 | 162 | 6 | 27 | 313 | 40 | 332 | 2.98e-76 | 237 |
| MS.gene24108.t1 | AT5G17820 | 39.482 | 309 | 173 | 6 | 10 | 313 | 63 | 362 | 9.58e-76 | 236 |
| MS.gene24108.t1 | AT5G67400 | 40.498 | 321 | 181 | 5 | 3 | 313 | 5 | 325 | 1.33e-75 | 235 |
| MS.gene24108.t1 | AT5G05340 | 41.946 | 298 | 159 | 6 | 23 | 313 | 30 | 320 | 2.07e-75 | 234 |
| MS.gene24108.t1 | AT3G03670 | 36.076 | 316 | 197 | 3 | 2 | 313 | 3 | 317 | 3.47e-75 | 234 |
| MS.gene24108.t1 | AT1G71695 | 41.830 | 306 | 157 | 7 | 19 | 313 | 40 | 335 | 4.01e-75 | 235 |
| MS.gene24108.t1 | AT4G37520 | 42.857 | 301 | 157 | 7 | 23 | 313 | 27 | 322 | 1.30e-74 | 232 |
| MS.gene24108.t1 | AT4G08770 | 42.810 | 306 | 160 | 8 | 23 | 316 | 24 | 326 | 2.82e-74 | 232 |
| MS.gene24108.t1 | AT1G49570 | 41.311 | 305 | 171 | 5 | 19 | 315 | 44 | 348 | 7.85e-74 | 231 |
| MS.gene24108.t1 | AT5G06730 | 38.889 | 324 | 185 | 7 | 6 | 317 | 12 | 334 | 9.09e-74 | 231 |
| MS.gene24108.t1 | AT2G22420 | 37.700 | 313 | 191 | 4 | 7 | 316 | 7 | 318 | 1.00e-73 | 230 |
| MS.gene24108.t1 | AT3G50990 | 41.830 | 306 | 172 | 4 | 17 | 316 | 35 | 340 | 1.82e-73 | 230 |
| MS.gene24108.t1 | AT5G66390 | 42.905 | 296 | 163 | 4 | 27 | 316 | 37 | 332 | 2.97e-73 | 229 |
| MS.gene24108.t1 | AT5G19880 | 42.154 | 325 | 174 | 10 | 4 | 316 | 6 | 328 | 3.84e-73 | 229 |
| MS.gene24108.t1 | AT4G17690 | 43.144 | 299 | 158 | 6 | 23 | 314 | 26 | 319 | 5.02e-73 | 228 |
| MS.gene24108.t1 | AT2G24800 | 42.434 | 304 | 159 | 8 | 23 | 316 | 31 | 328 | 2.41e-72 | 227 |
| MS.gene24108.t1 | AT4G26010 | 38.438 | 320 | 179 | 7 | 1 | 315 | 1 | 307 | 2.62e-72 | 226 |
| MS.gene24108.t1 | AT4G37530 | 45.977 | 261 | 131 | 6 | 18 | 270 | 21 | 279 | 3.79e-72 | 224 |
| MS.gene24108.t1 | AT4G25980 | 37.771 | 323 | 185 | 6 | 1 | 314 | 8 | 323 | 4.22e-72 | 226 |
| MS.gene24108.t1 | AT2G38380 | 40.741 | 324 | 181 | 8 | 3 | 316 | 10 | 332 | 4.82e-72 | 226 |
| MS.gene24108.t1 | AT1G44970 | 42.997 | 307 | 166 | 6 | 18 | 316 | 40 | 345 | 5.85e-72 | 226 |
| MS.gene24108.t1 | AT4G08780 | 41.503 | 306 | 164 | 8 | 23 | 316 | 24 | 326 | 6.24e-72 | 226 |
| MS.gene24108.t1 | AT4G26010 | 38.438 | 320 | 179 | 7 | 1 | 315 | 29 | 335 | 6.48e-72 | 226 |
| MS.gene24108.t1 | AT3G32980 | 39.938 | 323 | 179 | 9 | 4 | 316 | 16 | 333 | 4.75e-71 | 224 |
| MS.gene24108.t1 | AT2G38390 | 38.871 | 319 | 185 | 7 | 7 | 316 | 15 | 332 | 8.10e-70 | 221 |
| MS.gene24108.t1 | AT5G64100 | 40.199 | 301 | 162 | 6 | 25 | 316 | 39 | 330 | 2.54e-69 | 219 |
| MS.gene24108.t1 | AT4G33870 | 36.336 | 333 | 173 | 4 | 21 | 314 | 66 | 398 | 3.26e-69 | 221 |
| MS.gene24108.t1 | AT3G49120 | 40.373 | 322 | 179 | 9 | 5 | 316 | 16 | 334 | 3.53e-69 | 219 |
| MS.gene24108.t1 | AT2G35380 | 40.798 | 326 | 178 | 9 | 5 | 316 | 10 | 334 | 9.62e-69 | 218 |
| MS.gene24108.t1 | AT5G47000 | 38.438 | 320 | 180 | 7 | 7 | 314 | 13 | 327 | 1.30e-68 | 217 |
| MS.gene24108.t1 | AT5G64110 | 41.554 | 296 | 163 | 5 | 27 | 316 | 38 | 329 | 2.92e-68 | 216 |
| MS.gene24108.t1 | AT1G14550 | 37.267 | 322 | 187 | 6 | 4 | 316 | 5 | 320 | 3.04e-68 | 216 |
| MS.gene24108.t1 | AT1G14540 | 38.291 | 316 | 180 | 8 | 9 | 316 | 6 | 314 | 3.72e-68 | 216 |
| MS.gene24108.t1 | AT1G68850 | 37.908 | 306 | 177 | 8 | 23 | 316 | 30 | 334 | 4.65e-68 | 216 |
| MS.gene24108.t1 | AT1G77100 | 39.557 | 316 | 174 | 7 | 7 | 313 | 8 | 315 | 1.18e-67 | 214 |
| MS.gene24108.t1 | AT5G40150 | 39.274 | 303 | 172 | 6 | 21 | 316 | 30 | 327 | 3.92e-67 | 213 |
| MS.gene24108.t1 | AT5G58390 | 39.557 | 316 | 175 | 7 | 7 | 313 | 4 | 312 | 2.19e-66 | 211 |
| MS.gene24108.t1 | AT3G28200 | 38.264 | 311 | 163 | 7 | 21 | 316 | 19 | 315 | 3.38e-66 | 211 |
| MS.gene24108.t1 | AT3G49110 | 38.080 | 323 | 189 | 8 | 4 | 316 | 14 | 335 | 1.12e-65 | 210 |
| MS.gene24108.t1 | AT2G34060 | 38.284 | 303 | 177 | 6 | 23 | 315 | 42 | 344 | 6.48e-65 | 208 |
| MS.gene24108.t1 | AT1G30870 | 38.276 | 290 | 170 | 4 | 15 | 302 | 43 | 325 | 9.01e-64 | 205 |
| MS.gene24108.t1 | AT5G22410 | 37.846 | 325 | 181 | 11 | 2 | 313 | 5 | 321 | 5.12e-63 | 203 |
| MS.gene24108.t1 | AT5G58400 | 38.170 | 317 | 178 | 8 | 7 | 313 | 13 | 321 | 7.09e-63 | 202 |
| MS.gene24108.t1 | AT1G34510 | 36.213 | 301 | 175 | 6 | 18 | 313 | 17 | 305 | 2.23e-62 | 201 |
| MS.gene24108.t1 | AT2G43480 | 37.417 | 302 | 173 | 8 | 23 | 313 | 35 | 331 | 1.02e-58 | 192 |
| MS.gene24108.t1 | AT1G24110 | 35.000 | 320 | 200 | 6 | 2 | 314 | 1 | 319 | 4.63e-58 | 190 |
| MS.gene24108.t1 | AT5G24070 | 35.197 | 304 | 181 | 8 | 23 | 315 | 35 | 333 | 9.52e-57 | 187 |
| MS.gene24108.t1 | AT3G17070 | 34.868 | 304 | 185 | 5 | 23 | 316 | 38 | 338 | 1.76e-56 | 186 |
| MS.gene24108.t1 | AT5G39580 | 45.503 | 189 | 100 | 2 | 1 | 189 | 3 | 188 | 2.19e-53 | 175 |
| MS.gene24108.t1 | AT4G21960 | 33.634 | 333 | 186 | 8 | 5 | 315 | 6 | 325 | 7.39e-53 | 176 |
| MS.gene24108.t1 | AT4G25980 | 46.471 | 170 | 89 | 1 | 23 | 192 | 71 | 238 | 1.73e-52 | 174 |
| MS.gene24108.t1 | AT2G24800 | 49.123 | 171 | 81 | 3 | 23 | 192 | 31 | 196 | 1.33e-48 | 163 |
| MS.gene24108.t1 | AT2G35380 | 43.265 | 245 | 126 | 8 | 84 | 316 | 3 | 246 | 2.11e-48 | 162 |
| MS.gene24108.t1 | AT2G37130 | 32.450 | 302 | 191 | 6 | 23 | 316 | 30 | 326 | 3.21e-46 | 159 |
| MS.gene24108.t1 | AT2G37130 | 32.333 | 300 | 190 | 6 | 25 | 316 | 1 | 295 | 7.58e-46 | 157 |
| MS.gene24108.t1 | AT3G17070 | 32.443 | 262 | 163 | 6 | 65 | 316 | 18 | 275 | 2.10e-39 | 140 |
| MS.gene24108.t1 | AT4G32320 | 28.037 | 321 | 142 | 12 | 7 | 307 | 74 | 325 | 6.62e-19 | 86.3 |
| MS.gene24108.t1 | AT4G35970 | 28.520 | 277 | 122 | 9 | 45 | 302 | 21 | 240 | 2.40e-16 | 78.2 |
| MS.gene24108.t1 | AT4G35970 | 28.794 | 257 | 107 | 9 | 45 | 282 | 21 | 220 | 3.66e-14 | 70.9 |
| MS.gene24108.t1 | AT3G42570 | 34.615 | 104 | 66 | 1 | 85 | 186 | 44 | 147 | 4.46e-11 | 60.8 |
Find 77 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGGGAATGAGCATATT+TGG | 0.147681 | 1.2:-292440 | None:intergenic |
| GAGAGAAGCTTTGTTGTAAT+TGG | 0.166362 | 1.2:-292010 | None:intergenic |
| CTTGTTTAGGGCTGAATTTA+TGG | 0.206407 | 1.2:-292210 | None:intergenic |
| TGAATTTATGGATTCTATTT+TGG | 0.210139 | 1.2:-292198 | None:intergenic |
| GCTTGCAAATGATGGGTTTA+AGG | 0.211511 | 1.2:-292245 | None:intergenic |
| CTACCATCCTTTCTTCCTTT+TGG | 0.218544 | 1.2:-291933 | None:intergenic |
| CGTGTCTTGTGCTGATATTT+TGG | 0.259261 | 1.2:+291465 | MS.gene24108:CDS |
| AAGCTCTTTCAAATTCCATT+TGG | 0.303757 | 1.2:-292456 | None:intergenic |
| TGAAATATGGTATCAACTAT+TGG | 0.315933 | 1.2:+291007 | None:intergenic |
| CAAGATTTGGTTGCTCTCTC+AGG | 0.318920 | 1.2:+292050 | MS.gene24108:CDS |
| AGGACTTTCCTTGCAAGATT+TGG | 0.322053 | 1.2:+292037 | MS.gene24108:CDS |
| ACGGGTCAACACCTTGTTTA+GGG | 0.328269 | 1.2:-292222 | None:intergenic |
| AGAGAAGCTTTGTTGTAATT+GGG | 0.360077 | 1.2:-292009 | None:intergenic |
| AGCTCTTTCAAATTCCATTT+GGG | 0.368047 | 1.2:-292455 | None:intergenic |
| TGCACTTGCTAGAGAAGTTA+AGG | 0.379758 | 1.2:-291056 | None:intergenic |
| TAATATGACATTTGCTTTGG+AGG | 0.387640 | 1.2:-292270 | None:intergenic |
| TTTGGAAACCAATGCTTTAG+TGG | 0.389117 | 1.2:-292422 | None:intergenic |
| GACGGGTCAACACCTTGTTT+AGG | 0.394136 | 1.2:-292223 | None:intergenic |
| TGGAGGTTGCTTGCAAATGA+TGG | 0.406511 | 1.2:-292253 | None:intergenic |
| TATTACAAACTACTACTTCA+AGG | 0.421931 | 1.2:+292355 | MS.gene24108:CDS |
| AATGCATGCAATGATATGTT+TGG | 0.428472 | 1.2:-291391 | None:intergenic |
| GCATTGGAAGCAGTTTGTCC+AGG | 0.436667 | 1.2:+291439 | MS.gene24108:CDS |
| GGGAAAGAATAAAGCAGAAA+AGG | 0.443506 | 1.2:+291360 | MS.gene24108:CDS |
| CAAATATGCTCATTCCCAAA+TGG | 0.448115 | 1.2:+292441 | MS.gene24108:CDS |
| TATGTAGGAGGTCACACCCT+GGG | 0.448707 | 1.2:+292154 | MS.gene24108:intron |
| ATGTGGCAGTTGAGTCCAAT+GGG | 0.454545 | 1.2:-292318 | None:intergenic |
| AGTGGGAGCTGGCAATTGTC+TGG | 0.471619 | 1.2:-291976 | None:intergenic |
| TGCTAGGGATGCTGTCACTC+TGG | 0.481519 | 1.2:+291495 | MS.gene24108:CDS |
| ATGAACAATGTGCAAACCCC+AGG | 0.486001 | 1.2:-292171 | None:intergenic |
| CAGGTAGACTCCATCGTGGC+TGG | 0.491648 | 1.2:+291112 | MS.gene24108:CDS |
| GTCTGTTCTGTTGAAATCAA+AGG | 0.492739 | 1.2:+291339 | MS.gene24108:CDS |
| TTAGTCTGGAGGGCCAAGTT+GGG | 0.493333 | 1.2:+291905 | MS.gene24108:intron |
| CATGGTGGTGCTCATGATGA+TGG | 0.493487 | 1.2:+291030 | MS.gene24108:CDS |
| ATTAGTCTGGAGGGCCAAGT+TGG | 0.498984 | 1.2:+291904 | MS.gene24108:intron |
| TAATATATGAAGGGGTGTGA+TGG | 0.499161 | 1.2:+291316 | MS.gene24108:intron |
| TCATCCAACCACTAAAGCAT+TGG | 0.501090 | 1.2:+292414 | MS.gene24108:CDS |
| GGAGGTTGCTTGCAAATGAT+GGG | 0.501216 | 1.2:-292252 | None:intergenic |
| CAAATGATGGGTTTAAGGAC+GGG | 0.513605 | 1.2:-292240 | None:intergenic |
| TCTGTTCTGTTGAAATCAAA+GGG | 0.513793 | 1.2:+291340 | MS.gene24108:CDS |
| TAATTGGGAGATGTTGAAAG+TGG | 0.516813 | 1.2:-291994 | None:intergenic |
| GAAACCAATGCTTTAGTGGT+TGG | 0.519796 | 1.2:-292418 | None:intergenic |
| CCAATGGTGGAAAAGAGATC+AGG | 0.521759 | 1.2:+292512 | MS.gene24108:CDS |
| CATTGGAAGCAGTTTGTCCA+GGG | 0.522226 | 1.2:+291440 | MS.gene24108:CDS |
| TCAGCACAAGACACGACCCC+TGG | 0.525663 | 1.2:-291457 | None:intergenic |
| ATAAGCATTGTCAAAATATG+TGG | 0.528552 | 1.2:-292335 | None:intergenic |
| AATATATGAAGGGGTGTGAT+GGG | 0.529898 | 1.2:+291317 | MS.gene24108:intron |
| GGAAGTACCAAAAGGAAGAA+AGG | 0.531148 | 1.2:+291926 | MS.gene24108:CDS |
| CTATGAGCATACATGTCCTC+AGG | 0.533702 | 1.2:+291093 | MS.gene24108:CDS |
| TGCATGCGAAGCAGAGCTGA+TGG | 0.535374 | 1.2:-291172 | None:intergenic |
| TGAGAACGCTAAGAAAGCAT+TGG | 0.540855 | 1.2:+291423 | MS.gene24108:CDS |
| AAGAATAAAGCAGAAAAGGA+TGG | 0.545325 | 1.2:+291364 | MS.gene24108:CDS |
| CAACAAAGCTTCTCTCAAAG+AGG | 0.549993 | 1.2:+292017 | MS.gene24108:CDS |
| GCAAATGATGGGTTTAAGGA+CGG | 0.553010 | 1.2:-292241 | None:intergenic |
| ATGAGTAGCATCACCAATGG+TGG | 0.560539 | 1.2:+292499 | MS.gene24108:CDS |
| TGTGAGTGGCATTAGTCTGG+AGG | 0.564494 | 1.2:+291894 | MS.gene24108:intron |
| GTGAGTGGCATTAGTCTGGA+GGG | 0.578114 | 1.2:+291895 | MS.gene24108:intron |
| ATCATCTAACGAGATTACAT+TGG | 0.588718 | 1.2:-292537 | None:intergenic |
| CATAAATTCAGCCCTAAACA+AGG | 0.590505 | 1.2:+292211 | MS.gene24108:CDS |
| CCAAGTTGGGAAGTACCAAA+AGG | 0.591992 | 1.2:+291918 | MS.gene24108:CDS |
| TATGTGGCAGTTGAGTCCAA+TGG | 0.599988 | 1.2:-292319 | None:intergenic |
| GTACCAAAAGGAAGAAAGGA+TGG | 0.602460 | 1.2:+291930 | MS.gene24108:CDS |
| AAAGGATGGTAGAATCTCAA+AGG | 0.603107 | 1.2:+291944 | MS.gene24108:CDS |
| ATGTAGGAGGTCACACCCTG+GGG | 0.603228 | 1.2:+292155 | MS.gene24108:intron |
| TATGGTATCAACTATTGGCA+TGG | 0.604185 | 1.2:+291012 | None:intergenic |
| GAGAGCAACCAAATCTTGCA+AGG | 0.622104 | 1.2:-292045 | None:intergenic |
| GCATGCAATGATATGTTTGG+AGG | 0.631708 | 1.2:-291388 | None:intergenic |
| GAGATGTTGAAAGTGGGAGC+TGG | 0.642062 | 1.2:-291987 | None:intergenic |
| AAAATGAGTAGCATCACCAA+TGG | 0.654023 | 1.2:+292496 | MS.gene24108:CDS |
| AATTGGGAGATGTTGAAAGT+GGG | 0.657381 | 1.2:-291993 | None:intergenic |
| TGAACAATGTGCAAACCCCA+GGG | 0.660257 | 1.2:-292170 | None:intergenic |
| ATTGGAAGCAGTTTGTCCAG+GGG | 0.679665 | 1.2:+291441 | MS.gene24108:CDS |
| TTATGTAGGAGGTCACACCC+TGG | 0.680699 | 1.2:+292153 | MS.gene24108:intron |
| GTGTACTGCACCAGCCACGA+TGG | 0.698358 | 1.2:-291122 | None:intergenic |
| GGTATCAACTATTGGCATGG+TGG | 0.708481 | 1.2:+291015 | MS.gene24108:CDS |
| GCCACGATGGAGTCTACCTG+AGG | 0.712283 | 1.2:-291109 | None:intergenic |
| TCCTCAGGTAGACTCCATCG+TGG | 0.718540 | 1.2:+291108 | MS.gene24108:CDS |
| TGTGGCAGTTGAGTCCAATG+GGG | 0.768538 | 1.2:-292317 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTAATTAATTAATA+TGG | + | chr1.2:291787-291806 | MS.gene24108:intron | 0.0% |
| !! | TATATATATAATATATGAAG+GGG | + | chr1.2:291308-291327 | MS.gene24108:intron | 10.0% |
| !!! | TATATGAATTATGATAATTT+TGG | + | chr1.2:291656-291675 | MS.gene24108:intron | 10.0% |
| !!! | ATGATGTTATATTTTTATGT+AGG | + | chr1.2:292139-292158 | MS.gene24108:intron | 15.0% |
| !! | CAAATGTCATATTAAAAACA+AGG | + | chr1.2:292279-292298 | MS.gene24108:CDS | 20.0% |
| !! | TTATGTTTAAGTAACATTTC+TGG | + | chr1.2:291612-291631 | MS.gene24108:intron | 20.0% |
| !!! | ATGTTATATTTTTATGTAGG+AGG | + | chr1.2:292142-292161 | MS.gene24108:intron | 20.0% |
| !!! | TGAATTTATGGATTCTATTT+TGG | - | chr1.2:292201-292220 | None:intergenic | 20.0% |
| !!! | TTTTAATATGACATTTGCTT+TGG | - | chr1.2:292276-292295 | None:intergenic | 20.0% |
| ! | TATTACAAACTACTACTTCA+AGG | + | chr1.2:292355-292374 | MS.gene24108:CDS | 25.0% |
| !! | ATAAGCATTGTCAAAATATG+TGG | - | chr1.2:292338-292357 | None:intergenic | 25.0% |
| !! | ATTTTCATGATTGCTTCATA+AGG | + | chr1.2:291194-291213 | MS.gene24108:CDS | 25.0% |
| !! | CCACTAACTAATTTTGAATT+GGG | + | chr1.2:291870-291889 | MS.gene24108:intron | 25.0% |
| !! | TCCACTAACTAATTTTGAAT+TGG | + | chr1.2:291869-291888 | MS.gene24108:intron | 25.0% |
| !! | TTTTCATGATTGCTTCATAA+GGG | + | chr1.2:291195-291214 | MS.gene24108:CDS | 25.0% |
| !!! | TTTATGGATTCTATTTTGGA+AGG | - | chr1.2:292197-292216 | None:intergenic | 25.0% |
| AAAAACAAGGTGAAAAATGC+AGG | + | chr1.2:292292-292311 | MS.gene24108:CDS | 30.0% | |
| AAAACAAGGTGAAAAATGCA+GGG | + | chr1.2:292293-292312 | MS.gene24108:CDS | 30.0% | |
| AAGAATAAAGCAGAAAAGGA+TGG | + | chr1.2:291364-291383 | MS.gene24108:CDS | 30.0% | |
| AAGCTCTTTCAAATTCCATT+TGG | - | chr1.2:292459-292478 | None:intergenic | 30.0% | |
| AATGCATGCAATGATATGTT+TGG | - | chr1.2:291394-291413 | None:intergenic | 30.0% | |
| ACCTAACTACATGATTGATT+TGG | + | chr1.2:291691-291710 | MS.gene24108:intron | 30.0% | |
| AGCTCTTTCAAATTCCATTT+GGG | - | chr1.2:292458-292477 | None:intergenic | 30.0% | |
| CCCAATTCAAAATTAGTTAG+TGG | - | chr1.2:291873-291892 | None:intergenic | 30.0% | |
| TAATATGACATTTGCTTTGG+AGG | - | chr1.2:292273-292292 | None:intergenic | 30.0% | |
| TATAGTATTATACATGTCCG+AGG | - | chr1.2:291742-291761 | None:intergenic | 30.0% | |
| TCTGTTCTGTTGAAATCAAA+GGG | + | chr1.2:291340-291359 | MS.gene24108:CDS | 30.0% | |
| ! | CCTAACTACATGATTGATTT+GGG | + | chr1.2:291692-291711 | MS.gene24108:intron | 30.0% |
| !! | AGAGAAGCTTTGTTGTAATT+GGG | - | chr1.2:292012-292031 | None:intergenic | 30.0% |
| AAAATGAGTAGCATCACCAA+TGG | + | chr1.2:292496-292515 | MS.gene24108:CDS | 35.0% | |
| AAAGGATGGTAGAATCTCAA+AGG | + | chr1.2:291944-291963 | MS.gene24108:CDS | 35.0% | |
| AATTGGGAGATGTTGAAAGT+GGG | - | chr1.2:291996-292015 | None:intergenic | 35.0% | |
| CAAATATGCTCATTCCCAAA+TGG | + | chr1.2:292441-292460 | MS.gene24108:CDS | 35.0% | |
| CATAAATTCAGCCCTAAACA+AGG | + | chr1.2:292211-292230 | MS.gene24108:CDS | 35.0% | |
| CATTTGGGAATGAGCATATT+TGG | - | chr1.2:292443-292462 | None:intergenic | 35.0% | |
| CCCAAATCAATCATGTAGTT+AGG | - | chr1.2:291695-291714 | None:intergenic | 35.0% | |
| GGGAAAGAATAAAGCAGAAA+AGG | + | chr1.2:291360-291379 | MS.gene24108:CDS | 35.0% | |
| GTCTGTTCTGTTGAAATCAA+AGG | + | chr1.2:291339-291358 | MS.gene24108:CDS | 35.0% | |
| TAATTGGGAGATGTTGAAAG+TGG | - | chr1.2:291997-292016 | None:intergenic | 35.0% | |
| TTTGGAAACCAATGCTTTAG+TGG | - | chr1.2:292425-292444 | None:intergenic | 35.0% | |
| ! | AATATATGAAGGGGTGTGAT+GGG | + | chr1.2:291317-291336 | MS.gene24108:intron | 35.0% |
| ! | CTTGTTTAGGGCTGAATTTA+TGG | - | chr1.2:292213-292232 | None:intergenic | 35.0% |
| ! | TAATATATGAAGGGGTGTGA+TGG | + | chr1.2:291316-291335 | MS.gene24108:intron | 35.0% |
| ! | TGGAACTGTTTTGTCATTCA+TGG | - | chr1.2:291155-291174 | None:intergenic | 35.0% |
| !! | ATTTTGAATTGGGTTGTGAG+TGG | + | chr1.2:291880-291899 | MS.gene24108:intron | 35.0% |
| !! | GAGAGAAGCTTTGTTGTAAT+TGG | - | chr1.2:292013-292032 | None:intergenic | 35.0% |
| !! | GATGCTACTCATTTTGATCA+TGG | - | chr1.2:292491-292510 | None:intergenic | 35.0% |
| !! | TACATGATTGATTTGGGCTT+AGG | + | chr1.2:291698-291717 | MS.gene24108:intron | 35.0% |
| !!! | GGGCTTAGGAGTTTTAATTT+GGG | + | chr1.2:291712-291731 | MS.gene24108:intron | 35.0% |
| !!! | GTTTTAATTTGGGTTGTCCT+CGG | + | chr1.2:291722-291741 | MS.gene24108:intron | 35.0% |
| !!! | TGGGCTTAGGAGTTTTAATT+TGG | + | chr1.2:291711-291730 | MS.gene24108:intron | 35.0% |
| AGGACTTTCCTTGCAAGATT+TGG | + | chr1.2:292037-292056 | MS.gene24108:CDS | 40.0% | |
| ATGTTCACGCGAGAAGTAAA+TGG | - | chr1.2:291560-291579 | None:intergenic | 40.0% | |
| CAACAAAGCTTCTCTCAAAG+AGG | + | chr1.2:292017-292036 | MS.gene24108:CDS | 40.0% | |
| GAAACCAATGCTTTAGTGGT+TGG | - | chr1.2:292421-292440 | None:intergenic | 40.0% | |
| GCATGCAATGATATGTTTGG+AGG | - | chr1.2:291391-291410 | None:intergenic | 40.0% | |
| GTACCAAAAGGAAGAAAGGA+TGG | + | chr1.2:291930-291949 | MS.gene24108:CDS | 40.0% | |
| TCATCCAACCACTAAAGCAT+TGG | + | chr1.2:292414-292433 | MS.gene24108:CDS | 40.0% | |
| ! | CTACCATCCTTTCTTCCTTT+TGG | - | chr1.2:291936-291955 | None:intergenic | 40.0% |
| ! | TGAGAACGCTAAGAAAGCAT+TGG | + | chr1.2:291423-291442 | MS.gene24108:CDS | 40.0% |
| ! | TGCACTTGCTAGAGAAGTTA+AGG | - | chr1.2:291059-291078 | None:intergenic | 40.0% |
| !! | CAAATGATGGGTTTAAGGAC+GGG | - | chr1.2:292243-292262 | None:intergenic | 40.0% |
| !! | CGTGTCTTGTGCTGATATTT+TGG | + | chr1.2:291465-291484 | MS.gene24108:CDS | 40.0% |
| !! | GCAAATGATGGGTTTAAGGA+CGG | - | chr1.2:292244-292263 | None:intergenic | 40.0% |
| !! | GCTTGCAAATGATGGGTTTA+AGG | - | chr1.2:292248-292267 | None:intergenic | 40.0% |
| !! | GGAAGTACCAAAAGGAAGAA+AGG | + | chr1.2:291926-291945 | MS.gene24108:CDS | 40.0% |
| !!! | ATATTTTGGCTCTTGCTGCT+AGG | + | chr1.2:291479-291498 | MS.gene24108:CDS | 40.0% |
| !!! | TATTTTGGCTCTTGCTGCTA+GGG | + | chr1.2:291480-291499 | MS.gene24108:CDS | 40.0% |
| ATGAACAATGTGCAAACCCC+AGG | - | chr1.2:292174-292193 | None:intergenic | 45.0% | |
| ATGAGTAGCATCACCAATGG+TGG | + | chr1.2:292499-292518 | MS.gene24108:CDS | 45.0% | |
| ATGTGGCAGTTGAGTCCAAT+GGG | - | chr1.2:292321-292340 | None:intergenic | 45.0% | |
| ATTGGAAGCAGTTTGTCCAG+GGG | + | chr1.2:291441-291460 | MS.gene24108:CDS | 45.0% | |
| CATTGGAAGCAGTTTGTCCA+GGG | + | chr1.2:291440-291459 | MS.gene24108:CDS | 45.0% | |
| CTATGAGCATACATGTCCTC+AGG | + | chr1.2:291093-291112 | MS.gene24108:CDS | 45.0% | |
| GAGAGCAACCAAATCTTGCA+AGG | - | chr1.2:292048-292067 | None:intergenic | 45.0% | |
| GGAGGTTGCTTGCAAATGAT+GGG | - | chr1.2:292255-292274 | None:intergenic | 45.0% | |
| GGTATCAACTATTGGCATGG+TGG | + | chr1.2:291015-291034 | MS.gene24108:CDS | 45.0% | |
| TATGTGGCAGTTGAGTCCAA+TGG | - | chr1.2:292322-292341 | None:intergenic | 45.0% | |
| TGAACAATGTGCAAACCCCA+GGG | - | chr1.2:292173-292192 | None:intergenic | 45.0% | |
| TGGAGGTTGCTTGCAAATGA+TGG | - | chr1.2:292256-292275 | None:intergenic | 45.0% | |
| ! | ACGGGTCAACACCTTGTTTA+GGG | - | chr1.2:292225-292244 | None:intergenic | 45.0% |
| ! | CAAGATTTGGTTGCTCTCTC+AGG | + | chr1.2:292050-292069 | MS.gene24108:CDS | 45.0% |
| ! | CCAATGGTGGAAAAGAGATC+AGG | + | chr1.2:292512-292531 | MS.gene24108:CDS | 45.0% |
| ! | CCTGATCTCTTTTCCACCAT+TGG | - | chr1.2:292515-292534 | None:intergenic | 45.0% |
| ! | CCTTTTGGTACTTCCCAACT+TGG | - | chr1.2:291921-291940 | None:intergenic | 45.0% |
| !! | CCAAGTTGGGAAGTACCAAA+AGG | + | chr1.2:291918-291937 | MS.gene24108:CDS | 45.0% |
| !! | ATATATATATAATATATGAA+GGG | + | chr1.2:291307-291326 | MS.gene24108:intron | 5.0% |
| !! | TATATATATATAATATATGA+AGG | + | chr1.2:291306-291325 | MS.gene24108:intron | 5.0% |
| !! | TATTACTTAAAAAATTAAAA+TGG | + | chr1.2:291844-291863 | MS.gene24108:intron | 5.0% |
| GAAAAATGCAGGGTCCCCAT+TGG | + | chr1.2:292303-292322 | MS.gene24108:CDS | 50.0% | |
| GAGATGTTGAAAGTGGGAGC+TGG | - | chr1.2:291990-292009 | None:intergenic | 50.0% | |
| GCATTGGAAGCAGTTTGTCC+AGG | + | chr1.2:291439-291458 | MS.gene24108:CDS | 50.0% | |
| GGTTGTGAGTGGCATTAGTC+TGG | + | chr1.2:291891-291910 | MS.gene24108:intron | 50.0% | |
| TATGTAGGAGGTCACACCCT+GGG | + | chr1.2:292154-292173 | MS.gene24108:intron | 50.0% | |
| TGTGGCAGTTGAGTCCAATG+GGG | - | chr1.2:292320-292339 | None:intergenic | 50.0% | |
| TTAGTCTGGAGGGCCAAGTT+GGG | + | chr1.2:291905-291924 | MS.gene24108:intron | 50.0% | |
| TTATGTAGGAGGTCACACCC+TGG | + | chr1.2:292153-292172 | MS.gene24108:intron | 50.0% | |
| ! | ATTAGTCTGGAGGGCCAAGT+TGG | + | chr1.2:291904-291923 | MS.gene24108:intron | 50.0% |
| ! | CATGGTGGTGCTCATGATGA+TGG | + | chr1.2:291030-291049 | MS.gene24108:CDS | 50.0% |
| ! | GACGGGTCAACACCTTGTTT+AGG | - | chr1.2:292226-292245 | None:intergenic | 50.0% |
| ! | GTGAGTGGCATTAGTCTGGA+GGG | + | chr1.2:291895-291914 | MS.gene24108:intron | 50.0% |
| ! | TGTGAGTGGCATTAGTCTGG+AGG | + | chr1.2:291894-291913 | MS.gene24108:intron | 50.0% |
| AGTGGGAGCTGGCAATTGTC+TGG | - | chr1.2:291979-291998 | None:intergenic | 55.0% | |
| ATGTAGGAGGTCACACCCTG+GGG | + | chr1.2:292155-292174 | MS.gene24108:intron | 55.0% | |
| TCCTCAGGTAGACTCCATCG+TGG | + | chr1.2:291108-291127 | MS.gene24108:CDS | 55.0% | |
| TGCATGCGAAGCAGAGCTGA+TGG | - | chr1.2:291175-291194 | None:intergenic | 55.0% | |
| TGCTAGGGATGCTGTCACTC+TGG | + | chr1.2:291495-291514 | MS.gene24108:CDS | 55.0% | |
| CAGGTAGACTCCATCGTGGC+TGG | + | chr1.2:291112-291131 | MS.gene24108:CDS | 60.0% | |
| GCCACGATGGAGTCTACCTG+AGG | - | chr1.2:291112-291131 | None:intergenic | 60.0% | |
| GTGTACTGCACCAGCCACGA+TGG | - | chr1.2:291125-291144 | None:intergenic | 60.0% | |
| TCAGCACAAGACACGACCCC+TGG | - | chr1.2:291460-291479 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 291013 | 292558 | 291013 | ID=MS.gene24108 |
| chr1.2 | mRNA | 291013 | 292558 | 291013 | ID=MS.gene24108.t1;Parent=MS.gene24108 |
| chr1.2 | exon | 291013 | 291216 | 291013 | ID=MS.gene24108.t1.exon1;Parent=MS.gene24108.t1 |
| chr1.2 | CDS | 291013 | 291216 | 291013 | ID=cds.MS.gene24108.t1;Parent=MS.gene24108.t1 |
| chr1.2 | exon | 291328 | 291516 | 291328 | ID=MS.gene24108.t1.exon2;Parent=MS.gene24108.t1 |
| chr1.2 | CDS | 291328 | 291516 | 291328 | ID=cds.MS.gene24108.t1;Parent=MS.gene24108.t1 |
| chr1.2 | exon | 291909 | 292071 | 291909 | ID=MS.gene24108.t1.exon3;Parent=MS.gene24108.t1 |
| chr1.2 | CDS | 291909 | 292071 | 291909 | ID=cds.MS.gene24108.t1;Parent=MS.gene24108.t1 |
| chr1.2 | exon | 292161 | 292558 | 292161 | ID=MS.gene24108.t1.exon4;Parent=MS.gene24108.t1 |
| chr1.2 | CDS | 292161 | 292558 | 292161 | ID=cds.MS.gene24108.t1;Parent=MS.gene24108.t1 |
| Gene Sequence |
| Protein sequence |
