Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004925.t1 | XP_013468807.1 | 98.3 | 287 | 5 | 0 | 1 | 287 | 41 | 327 | 3.40E-159 | 570.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004925.t1 | Q9SZB9 | 76.3 | 287 | 68 | 0 | 1 | 287 | 39 | 325 | 1.6e-125 | 450.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004925.t1 | A0A072VLG5 | 98.3 | 287 | 5 | 0 | 1 | 287 | 41 | 327 | 2.5e-159 | 570.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene017207 | MS.gene004925 | PPI |
MS.gene004925 | MS.gene009691 | PPI |
MS.gene88971 | MS.gene004925 | PPI |
MS.gene070268 | MS.gene004925 | PPI |
MS.gene012362 | MS.gene004925 | PPI |
MS.gene009689 | MS.gene004925 | PPI |
MS.gene073297 | MS.gene004925 | PPI |
MS.gene26286 | MS.gene004925 | PPI |
MS.gene049488 | MS.gene004925 | PPI |
MS.gene49484 | MS.gene004925 | PPI |
MS.gene004925 | MS.gene98878 | PPI |
MS.gene38511 | MS.gene004925 | PPI |
MS.gene004925 | MS.gene41565 | PPI |
MS.gene96335 | MS.gene004925 | PPI |
MS.gene26287 | MS.gene004925 | PPI |
MS.gene004925 | MS.gene017208 | PPI |
MS.gene004925 | MS.gene008562 | PPI |
MS.gene004925 | MS.gene24108 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004925.t1 | MTR_1g077000 | 98.258 | 287 | 5 | 0 | 1 | 287 | 41 | 327 | 0.0 | 589 |
MS.gene004925.t1 | MTR_0155s0040 | 67.944 | 287 | 92 | 0 | 1 | 287 | 29 | 315 | 1.78e-148 | 419 |
MS.gene004925.t1 | MTR_5g022870 | 47.973 | 296 | 141 | 3 | 1 | 287 | 25 | 316 | 1.51e-97 | 289 |
MS.gene004925.t1 | MTR_8g075100 | 48.475 | 295 | 139 | 3 | 2 | 287 | 29 | 319 | 2.97e-95 | 283 |
MS.gene004925.t1 | MTR_1g101830 | 47.797 | 295 | 143 | 3 | 2 | 287 | 30 | 322 | 3.05e-94 | 281 |
MS.gene004925.t1 | MTR_1g025980 | 47.945 | 292 | 140 | 4 | 1 | 283 | 26 | 314 | 1.40e-93 | 279 |
MS.gene004925.t1 | MTR_3g092990 | 46.823 | 299 | 147 | 5 | 1 | 287 | 28 | 326 | 5.30e-87 | 263 |
MS.gene004925.t1 | MTR_4g046713 | 44.257 | 296 | 154 | 3 | 3 | 287 | 31 | 326 | 2.80e-85 | 258 |
MS.gene004925.t1 | MTR_1g086320 | 46.667 | 300 | 145 | 7 | 3 | 287 | 34 | 333 | 7.37e-85 | 258 |
MS.gene004925.t1 | MTR_3g094650 | 45.051 | 293 | 153 | 5 | 2 | 287 | 31 | 322 | 3.78e-84 | 255 |
MS.gene004925.t1 | MTR_3g072190 | 45.704 | 291 | 152 | 5 | 2 | 287 | 29 | 318 | 1.96e-83 | 253 |
MS.gene004925.t1 | MTR_1g086490 | 44.625 | 307 | 148 | 7 | 3 | 287 | 34 | 340 | 2.21e-82 | 251 |
MS.gene004925.t1 | MTR_5g074970 | 44.068 | 295 | 155 | 5 | 2 | 287 | 33 | 326 | 8.77e-82 | 249 |
MS.gene004925.t1 | MTR_4g122640 | 45.270 | 296 | 152 | 6 | 2 | 287 | 41 | 336 | 9.36e-81 | 247 |
MS.gene004925.t1 | MTR_7g026990 | 44.637 | 289 | 155 | 4 | 3 | 287 | 35 | 322 | 9.60e-81 | 247 |
MS.gene004925.t1 | MTR_7g072510 | 44.674 | 291 | 155 | 5 | 2 | 287 | 23 | 312 | 1.31e-80 | 246 |
MS.gene004925.t1 | MTR_7g086820 | 42.808 | 292 | 161 | 3 | 1 | 287 | 22 | 312 | 1.54e-80 | 246 |
MS.gene004925.t1 | MTR_3g466200 | 43.878 | 294 | 156 | 5 | 2 | 287 | 28 | 320 | 2.95e-80 | 245 |
MS.gene004925.t1 | MTR_1g038680 | 44.040 | 302 | 154 | 7 | 1 | 287 | 31 | 332 | 3.29e-80 | 246 |
MS.gene004925.t1 | MTR_5g074760 | 44.746 | 295 | 153 | 7 | 2 | 287 | 28 | 321 | 7.39e-80 | 244 |
MS.gene004925.t1 | MTR_7g086870 | 42.268 | 291 | 161 | 3 | 1 | 287 | 24 | 311 | 1.08e-79 | 244 |
MS.gene004925.t1 | MTR_7g107520 | 42.230 | 296 | 158 | 5 | 2 | 287 | 28 | 320 | 1.83e-79 | 243 |
MS.gene004925.t1 | MTR_5g017850 | 42.088 | 297 | 161 | 4 | 2 | 287 | 30 | 326 | 2.15e-79 | 243 |
MS.gene004925.t1 | MTR_5g074740 | 43.729 | 295 | 156 | 7 | 2 | 287 | 28 | 321 | 5.15e-79 | 242 |
MS.gene004925.t1 | MTR_5g083860 | 44.027 | 293 | 156 | 5 | 2 | 287 | 34 | 325 | 5.42e-79 | 242 |
MS.gene004925.t1 | MTR_3g466180 | 46.048 | 291 | 151 | 5 | 2 | 287 | 34 | 323 | 1.19e-78 | 241 |
MS.gene004925.t1 | MTR_2g088770 | 40.134 | 299 | 166 | 6 | 1 | 287 | 28 | 325 | 4.07e-78 | 240 |
MS.gene004925.t1 | MTR_7g072480 | 44.330 | 291 | 156 | 5 | 2 | 287 | 27 | 316 | 6.48e-78 | 239 |
MS.gene004925.t1 | MTR_5g017860 | 41.077 | 297 | 164 | 4 | 2 | 287 | 30 | 326 | 7.88e-78 | 239 |
MS.gene004925.t1 | MTR_1g115900 | 42.230 | 296 | 157 | 6 | 2 | 287 | 30 | 321 | 1.05e-77 | 239 |
MS.gene004925.t1 | MTR_5g074860 | 43.197 | 294 | 157 | 7 | 2 | 286 | 32 | 324 | 1.53e-77 | 239 |
MS.gene004925.t1 | MTR_3g094670 | 44.521 | 292 | 154 | 5 | 3 | 287 | 32 | 322 | 3.26e-77 | 238 |
MS.gene004925.t1 | MTR_5g049280 | 42.574 | 303 | 158 | 7 | 1 | 287 | 35 | 337 | 7.14e-77 | 237 |
MS.gene004925.t1 | MTR_7g093370 | 41.806 | 299 | 160 | 6 | 3 | 287 | 73 | 371 | 1.02e-76 | 238 |
MS.gene004925.t1 | MTR_2g029560 | 41.275 | 298 | 162 | 5 | 3 | 287 | 28 | 325 | 3.30e-76 | 236 |
MS.gene004925.t1 | MTR_4g029180 | 41.638 | 293 | 163 | 6 | 2 | 287 | 30 | 321 | 7.91e-76 | 234 |
MS.gene004925.t1 | MTR_2g084080 | 41.237 | 291 | 165 | 5 | 2 | 287 | 28 | 317 | 1.20e-75 | 233 |
MS.gene004925.t1 | MTR_4g029190 | 42.955 | 291 | 160 | 4 | 3 | 287 | 50 | 340 | 3.27e-75 | 233 |
MS.gene004925.t1 | MTR_4g030890 | 42.712 | 295 | 157 | 5 | 3 | 287 | 104 | 396 | 3.37e-75 | 236 |
MS.gene004925.t1 | MTR_4g029170 | 40.956 | 293 | 165 | 6 | 2 | 287 | 30 | 321 | 3.57e-75 | 233 |
MS.gene004925.t1 | MTR_1g054205 | 42.140 | 299 | 159 | 6 | 3 | 287 | 28 | 326 | 4.45e-75 | 233 |
MS.gene004925.t1 | MTR_2g029730 | 40.940 | 298 | 163 | 5 | 3 | 287 | 29 | 326 | 6.12e-75 | 233 |
MS.gene004925.t1 | MTR_5g074710 | 42.034 | 295 | 161 | 7 | 2 | 287 | 28 | 321 | 6.37e-75 | 232 |
MS.gene004925.t1 | MTR_8g062780 | 42.809 | 299 | 158 | 5 | 2 | 287 | 26 | 324 | 6.55e-75 | 232 |
MS.gene004925.t1 | MTR_4g031140 | 42.034 | 295 | 159 | 5 | 3 | 287 | 32 | 324 | 1.43e-74 | 232 |
MS.gene004925.t1 | MTR_5g014100 | 43.377 | 302 | 154 | 7 | 3 | 287 | 30 | 331 | 1.84e-74 | 231 |
MS.gene004925.t1 | MTR_5g016010 | 41.806 | 299 | 160 | 5 | 2 | 286 | 30 | 328 | 2.12e-74 | 231 |
MS.gene004925.t1 | MTR_4g029200 | 43.686 | 293 | 153 | 6 | 3 | 287 | 50 | 338 | 2.42e-74 | 231 |
MS.gene004925.t1 | MTR_1g022970 | 42.282 | 298 | 159 | 6 | 3 | 287 | 50 | 347 | 4.86e-74 | 230 |
MS.gene004925.t1 | MTR_3g092990 | 43.813 | 299 | 145 | 6 | 1 | 287 | 28 | 315 | 5.37e-74 | 229 |
MS.gene004925.t1 | MTR_6g043280 | 40.550 | 291 | 168 | 3 | 1 | 287 | 43 | 332 | 5.52e-74 | 230 |
MS.gene004925.t1 | MTR_2g084090 | 40.068 | 292 | 168 | 6 | 2 | 287 | 28 | 318 | 9.58e-74 | 229 |
MS.gene004925.t1 | MTR_5g021060 | 41.414 | 297 | 162 | 6 | 3 | 287 | 34 | 330 | 9.98e-74 | 229 |
MS.gene004925.t1 | MTR_3g094630 | 43.345 | 293 | 158 | 5 | 2 | 287 | 31 | 322 | 1.34e-73 | 228 |
MS.gene004925.t1 | MTR_7g029030 | 41.156 | 294 | 164 | 6 | 2 | 287 | 28 | 320 | 6.92e-73 | 226 |
MS.gene004925.t1 | MTR_2g084110 | 40.893 | 291 | 166 | 5 | 2 | 287 | 28 | 317 | 1.04e-72 | 226 |
MS.gene004925.t1 | MTR_2g008710 | 39.333 | 300 | 166 | 5 | 1 | 287 | 29 | 325 | 2.98e-72 | 225 |
MS.gene004925.t1 | MTR_6g043240 | 41.237 | 291 | 160 | 6 | 3 | 287 | 46 | 331 | 3.46e-72 | 226 |
MS.gene004925.t1 | MTR_6g027440 | 40.550 | 291 | 166 | 3 | 3 | 287 | 25 | 314 | 5.15e-72 | 224 |
MS.gene004925.t1 | MTR_2g029850 | 39.933 | 298 | 166 | 5 | 3 | 287 | 33 | 330 | 5.94e-72 | 225 |
MS.gene004925.t1 | MTR_2g028980 | 40.940 | 298 | 163 | 6 | 3 | 287 | 33 | 330 | 1.18e-71 | 224 |
MS.gene004925.t1 | MTR_8g076820 | 41.414 | 297 | 162 | 6 | 3 | 287 | 34 | 330 | 1.80e-71 | 223 |
MS.gene004925.t1 | MTR_4g083710 | 41.356 | 295 | 164 | 5 | 2 | 287 | 30 | 324 | 2.49e-71 | 223 |
MS.gene004925.t1 | MTR_6g043460 | 41.958 | 286 | 162 | 2 | 2 | 283 | 39 | 324 | 5.95e-71 | 223 |
MS.gene004925.t1 | MTR_1g090760 | 40.199 | 301 | 166 | 6 | 1 | 287 | 30 | 330 | 1.16e-70 | 221 |
MS.gene004925.t1 | MTR_2g437770 | 39.796 | 294 | 166 | 4 | 1 | 287 | 52 | 341 | 1.20e-70 | 221 |
MS.gene004925.t1 | MTR_2g084020 | 39.726 | 292 | 169 | 6 | 2 | 287 | 28 | 318 | 1.78e-70 | 220 |
MS.gene004925.t1 | MTR_2g040000 | 42.857 | 301 | 154 | 8 | 3 | 287 | 33 | 331 | 2.60e-70 | 220 |
MS.gene004925.t1 | MTR_3g072190 | 47.012 | 251 | 127 | 5 | 42 | 287 | 2 | 251 | 2.82e-70 | 218 |
MS.gene004925.t1 | MTR_4g095450 | 39.863 | 291 | 166 | 5 | 2 | 283 | 30 | 320 | 1.08e-69 | 218 |
MS.gene004925.t1 | MTR_2g029860 | 38.255 | 298 | 171 | 5 | 3 | 287 | 33 | 330 | 2.91e-69 | 218 |
MS.gene004925.t1 | MTR_2g084010 | 39.726 | 292 | 169 | 6 | 2 | 287 | 28 | 318 | 3.13e-69 | 217 |
MS.gene004925.t1 | MTR_2g029820 | 39.130 | 299 | 169 | 6 | 2 | 287 | 32 | 330 | 5.29e-69 | 218 |
MS.gene004925.t1 | MTR_2g029750 | 40.333 | 300 | 164 | 7 | 2 | 287 | 32 | 330 | 5.31e-69 | 218 |
MS.gene004925.t1 | MTR_4g125940 | 41.196 | 301 | 160 | 7 | 2 | 287 | 31 | 329 | 6.34e-69 | 217 |
MS.gene004925.t1 | MTR_2g029815 | 39.465 | 299 | 168 | 6 | 2 | 287 | 32 | 330 | 9.38e-69 | 217 |
MS.gene004925.t1 | MTR_4g114210 | 39.130 | 299 | 165 | 4 | 3 | 287 | 25 | 320 | 1.37e-68 | 216 |
MS.gene004925.t1 | MTR_2g029800 | 38.127 | 299 | 172 | 6 | 2 | 287 | 32 | 330 | 5.98e-68 | 215 |
MS.gene004925.t1 | MTR_4g074995 | 41.156 | 294 | 153 | 6 | 2 | 287 | 27 | 308 | 8.46e-68 | 213 |
MS.gene004925.t1 | MTR_2g029830 | 38.591 | 298 | 170 | 6 | 3 | 287 | 32 | 329 | 9.32e-68 | 214 |
MS.gene004925.t1 | MTR_3g467600 | 40.203 | 296 | 166 | 8 | 2 | 287 | 30 | 324 | 1.85e-67 | 213 |
MS.gene004925.t1 | MTR_2g029740 | 39.130 | 299 | 167 | 7 | 3 | 287 | 33 | 330 | 2.46e-67 | 213 |
MS.gene004925.t1 | MTR_1g009750 | 38.206 | 301 | 171 | 6 | 1 | 287 | 29 | 328 | 8.26e-67 | 211 |
MS.gene004925.t1 | MTR_4g133800 | 38.095 | 294 | 172 | 3 | 1 | 287 | 43 | 333 | 2.42e-66 | 210 |
MS.gene004925.t1 | MTR_4g087965 | 41.472 | 299 | 159 | 8 | 1 | 283 | 44 | 342 | 6.10e-66 | 209 |
MS.gene004925.t1 | MTR_0286s0010 | 39.535 | 301 | 166 | 6 | 1 | 287 | 36 | 334 | 2.64e-65 | 207 |
MS.gene004925.t1 | MTR_6g008075 | 39.535 | 301 | 166 | 6 | 1 | 287 | 36 | 334 | 2.64e-65 | 207 |
MS.gene004925.t1 | MTR_2g084000 | 37.671 | 292 | 175 | 6 | 2 | 287 | 29 | 319 | 1.37e-64 | 205 |
MS.gene004925.t1 | MTR_4g127670 | 38.462 | 299 | 167 | 6 | 3 | 287 | 28 | 323 | 3.96e-64 | 204 |
MS.gene004925.t1 | MTR_2g029910 | 37.333 | 300 | 174 | 5 | 2 | 287 | 33 | 332 | 1.36e-63 | 204 |
MS.gene004925.t1 | MTR_4g074990 | 38.908 | 293 | 156 | 5 | 3 | 287 | 28 | 305 | 1.43e-63 | 202 |
MS.gene004925.t1 | MTR_4g125940 | 41.971 | 274 | 142 | 7 | 29 | 287 | 3 | 274 | 4.07e-63 | 200 |
MS.gene004925.t1 | MTR_2g067440 | 34.154 | 325 | 173 | 6 | 2 | 286 | 63 | 386 | 2.48e-60 | 196 |
MS.gene004925.t1 | MTR_3g105790 | 37.874 | 301 | 166 | 6 | 2 | 287 | 28 | 322 | 3.88e-60 | 194 |
MS.gene004925.t1 | MTR_4g132490 | 37.500 | 296 | 175 | 4 | 2 | 287 | 32 | 327 | 7.79e-60 | 193 |
MS.gene004925.t1 | MTR_2g008160 | 37.667 | 300 | 172 | 7 | 1 | 287 | 26 | 323 | 1.25e-59 | 192 |
MS.gene004925.t1 | MTR_4g074980 | 38.542 | 288 | 154 | 5 | 2 | 287 | 28 | 294 | 2.47e-59 | 191 |
MS.gene004925.t1 | MTR_5g033470 | 37.209 | 301 | 173 | 6 | 3 | 287 | 77 | 377 | 4.13e-59 | 193 |
MS.gene004925.t1 | MTR_2g077990 | 35.168 | 327 | 170 | 6 | 2 | 286 | 79 | 405 | 1.08e-58 | 192 |
MS.gene004925.t1 | MTR_1g009750 | 36.120 | 299 | 163 | 7 | 1 | 287 | 29 | 311 | 1.90e-58 | 189 |
MS.gene004925.t1 | MTR_2g099175 | 37.874 | 301 | 170 | 4 | 1 | 287 | 38 | 335 | 4.52e-58 | 189 |
MS.gene004925.t1 | MTR_2g078610 | 34.862 | 327 | 171 | 7 | 2 | 286 | 79 | 405 | 1.03e-57 | 190 |
MS.gene004925.t1 | MTR_4g132110 | 34.364 | 291 | 183 | 3 | 1 | 283 | 34 | 324 | 7.26e-57 | 186 |
MS.gene004925.t1 | MTR_5g074860 | 37.075 | 294 | 136 | 7 | 2 | 286 | 32 | 285 | 4.32e-56 | 182 |
MS.gene004925.t1 | MTR_4g074980 | 42.920 | 226 | 121 | 4 | 2 | 219 | 28 | 253 | 1.04e-55 | 180 |
MS.gene004925.t1 | MTR_4g132110 | 33.784 | 296 | 183 | 4 | 1 | 283 | 34 | 329 | 1.23e-54 | 180 |
MS.gene004925.t1 | MTR_0147s0010 | 34.921 | 315 | 162 | 6 | 2 | 286 | 80 | 381 | 1.77e-54 | 181 |
MS.gene004925.t1 | MTR_2g078280 | 34.615 | 312 | 162 | 6 | 2 | 271 | 79 | 390 | 6.55e-54 | 180 |
MS.gene004925.t1 | MTR_2g029830 | 38.911 | 257 | 144 | 6 | 44 | 287 | 5 | 261 | 1.32e-52 | 173 |
MS.gene004925.t1 | MTR_2g008730 | 34.000 | 300 | 158 | 5 | 1 | 287 | 29 | 301 | 1.12e-51 | 171 |
MS.gene004925.t1 | MTR_1g066380 | 31.525 | 295 | 194 | 3 | 1 | 287 | 29 | 323 | 3.44e-50 | 168 |
MS.gene004925.t1 | MTR_2g008160 | 35.274 | 292 | 155 | 6 | 1 | 287 | 26 | 288 | 5.72e-50 | 167 |
MS.gene004925.t1 | MTR_2g067450 | 34.007 | 297 | 183 | 6 | 2 | 286 | 14 | 309 | 1.28e-48 | 164 |
MS.gene004925.t1 | MTR_1g066710 | 31.186 | 295 | 195 | 3 | 1 | 287 | 29 | 323 | 1.97e-48 | 164 |
MS.gene004925.t1 | MTR_1g066640 | 30.847 | 295 | 196 | 3 | 1 | 287 | 29 | 323 | 5.44e-46 | 157 |
MS.gene004925.t1 | MTR_1g066680 | 31.186 | 295 | 194 | 4 | 1 | 287 | 29 | 322 | 1.14e-44 | 154 |
MS.gene004925.t1 | MTR_2g008160 | 42.857 | 168 | 94 | 1 | 1 | 168 | 26 | 191 | 1.79e-44 | 150 |
MS.gene004925.t1 | MTR_5g074700 | 39.013 | 223 | 117 | 7 | 71 | 287 | 5 | 214 | 1.76e-43 | 148 |
MS.gene004925.t1 | MTR_3g105790 | 37.551 | 245 | 135 | 5 | 58 | 287 | 5 | 246 | 3.24e-41 | 143 |
MS.gene004925.t1 | MTR_1g066380 | 30.830 | 253 | 167 | 3 | 43 | 287 | 3 | 255 | 2.67e-38 | 135 |
MS.gene004925.t1 | MTR_3g072210 | 42.162 | 185 | 100 | 6 | 109 | 287 | 55 | 238 | 1.38e-37 | 133 |
MS.gene004925.t1 | MTR_7g086790 | 35.500 | 200 | 101 | 3 | 46 | 245 | 17 | 188 | 1.07e-31 | 116 |
MS.gene004925.t1 | MTR_2g029880 | 34.921 | 189 | 107 | 5 | 108 | 287 | 7 | 188 | 4.81e-30 | 113 |
MS.gene004925.t1 | MTR_3g072260 | 50.467 | 107 | 52 | 1 | 2 | 107 | 29 | 135 | 4.10e-29 | 108 |
MS.gene004925.t1 | MTR_7g072490 | 33.778 | 225 | 95 | 6 | 45 | 267 | 2 | 174 | 7.07e-28 | 107 |
MS.gene004925.t1 | MTR_6g071110 | 61.798 | 89 | 23 | 2 | 67 | 155 | 82 | 159 | 2.41e-27 | 104 |
MS.gene004925.t1 | MTR_2g077980 | 27.562 | 283 | 158 | 7 | 51 | 286 | 1 | 283 | 3.21e-24 | 99.4 |
MS.gene004925.t1 | MTR_2g078560 | 29.204 | 226 | 119 | 5 | 102 | 286 | 94 | 319 | 4.40e-23 | 97.1 |
MS.gene004925.t1 | MTR_1g089005 | 40.870 | 115 | 62 | 1 | 2 | 110 | 18 | 132 | 6.12e-23 | 92.8 |
MS.gene004925.t1 | MTR_4g114220 | 52.439 | 82 | 30 | 2 | 24 | 105 | 28 | 100 | 1.97e-21 | 88.2 |
MS.gene004925.t1 | MTR_6g048160 | 55.882 | 68 | 27 | 1 | 38 | 105 | 22 | 86 | 1.89e-20 | 84.0 |
MS.gene004925.t1 | MTR_5g058120 | 37.013 | 154 | 91 | 3 | 132 | 283 | 6 | 155 | 3.53e-20 | 87.8 |
MS.gene004925.t1 | MTR_3g107060 | 30.469 | 256 | 109 | 8 | 30 | 266 | 105 | 310 | 7.55e-20 | 87.8 |
MS.gene004925.t1 | MTR_7g086810 | 33.621 | 116 | 52 | 1 | 1 | 116 | 8 | 98 | 1.79e-18 | 82.8 |
MS.gene004925.t1 | MTR_3g462850 | 37.589 | 141 | 74 | 5 | 161 | 287 | 9 | 149 | 8.85e-18 | 78.6 |
MS.gene004925.t1 | MTR_1g098320 | 48.611 | 72 | 37 | 0 | 212 | 283 | 49 | 120 | 1.87e-17 | 77.4 |
MS.gene004925.t1 | MTR_7g086785 | 45.205 | 73 | 40 | 0 | 44 | 116 | 3 | 75 | 1.05e-16 | 75.5 |
MS.gene004925.t1 | MTR_4g012865 | 50.000 | 64 | 32 | 0 | 2 | 65 | 80 | 143 | 1.04e-14 | 70.5 |
MS.gene004925.t1 | MTR_3g088160 | 29.008 | 262 | 139 | 11 | 33 | 272 | 121 | 357 | 1.98e-13 | 70.1 |
MS.gene004925.t1 | MTR_3g088160 | 29.008 | 262 | 139 | 11 | 33 | 272 | 121 | 357 | 2.55e-13 | 70.1 |
MS.gene004925.t1 | MTR_7g107500 | 40.541 | 74 | 43 | 1 | 214 | 287 | 25 | 97 | 4.09e-13 | 64.7 |
MS.gene004925.t1 | MTR_6g071100 | 50.000 | 62 | 24 | 1 | 111 | 172 | 26 | 80 | 2.28e-12 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004925.t1 | AT4G33420 | 76.307 | 287 | 68 | 0 | 1 | 287 | 39 | 325 | 1.23e-165 | 462 |
MS.gene004925.t1 | AT4G33420 | 76.307 | 287 | 68 | 0 | 1 | 287 | 86 | 372 | 6.61e-165 | 462 |
MS.gene004925.t1 | AT5G42180 | 47.279 | 294 | 143 | 3 | 2 | 286 | 26 | 316 | 2.06e-95 | 284 |
MS.gene004925.t1 | AT5G51890 | 46.622 | 296 | 146 | 3 | 2 | 287 | 29 | 322 | 4.14e-94 | 281 |
MS.gene004925.t1 | AT4G11290 | 45.000 | 300 | 152 | 8 | 1 | 287 | 27 | 326 | 4.28e-87 | 263 |
MS.gene004925.t1 | AT1G05260 | 45.485 | 299 | 150 | 6 | 1 | 287 | 28 | 325 | 9.39e-85 | 257 |
MS.gene004925.t1 | AT4G36430 | 42.761 | 297 | 158 | 6 | 3 | 287 | 34 | 330 | 5.97e-83 | 253 |
MS.gene004925.t1 | AT4G16270 | 47.635 | 296 | 141 | 6 | 4 | 287 | 55 | 348 | 2.92e-81 | 249 |
MS.gene004925.t1 | AT3G03670 | 42.088 | 297 | 162 | 4 | 1 | 287 | 25 | 321 | 5.56e-81 | 247 |
MS.gene004925.t1 | AT5G05340 | 43.686 | 293 | 157 | 5 | 2 | 287 | 33 | 324 | 7.64e-80 | 244 |
MS.gene004925.t1 | AT1G68850 | 43.092 | 304 | 156 | 8 | 1 | 287 | 32 | 335 | 1.29e-78 | 242 |
MS.gene004925.t1 | AT2G18150 | 41.414 | 297 | 162 | 6 | 3 | 287 | 40 | 336 | 1.33e-78 | 242 |
MS.gene004925.t1 | AT2G35380 | 43.750 | 304 | 150 | 7 | 3 | 287 | 34 | 335 | 3.07e-78 | 241 |
MS.gene004925.t1 | AT1G71695 | 40.476 | 294 | 168 | 4 | 1 | 287 | 46 | 339 | 3.51e-78 | 241 |
MS.gene004925.t1 | AT2G18140 | 41.275 | 298 | 163 | 6 | 2 | 287 | 38 | 335 | 8.31e-78 | 240 |
MS.gene004925.t1 | AT3G21770 | 41.695 | 295 | 159 | 6 | 1 | 283 | 31 | 324 | 1.83e-77 | 239 |
MS.gene004925.t1 | AT5G17820 | 42.517 | 294 | 156 | 5 | 1 | 287 | 26 | 313 | 1.02e-76 | 236 |
MS.gene004925.t1 | AT5G06720 | 41.611 | 298 | 161 | 5 | 3 | 287 | 36 | 333 | 1.54e-76 | 236 |
MS.gene004925.t1 | AT5G06730 | 41.946 | 298 | 160 | 7 | 3 | 287 | 37 | 334 | 2.70e-76 | 236 |
MS.gene004925.t1 | AT1G05240 | 40.667 | 300 | 155 | 6 | 1 | 283 | 28 | 321 | 2.90e-76 | 235 |
MS.gene004925.t1 | AT1G05250 | 40.667 | 300 | 155 | 6 | 1 | 283 | 28 | 321 | 2.90e-76 | 235 |
MS.gene004925.t1 | AT5G19880 | 43.377 | 302 | 155 | 6 | 2 | 287 | 28 | 329 | 7.53e-76 | 234 |
MS.gene004925.t1 | AT5G17820 | 42.321 | 293 | 158 | 4 | 1 | 287 | 79 | 366 | 1.56e-75 | 235 |
MS.gene004925.t1 | AT3G01190 | 42.000 | 300 | 155 | 6 | 1 | 287 | 28 | 321 | 1.99e-75 | 233 |
MS.gene004925.t1 | AT5G66390 | 40.741 | 297 | 164 | 6 | 3 | 287 | 37 | 333 | 2.43e-75 | 233 |
MS.gene004925.t1 | AT3G28200 | 43.345 | 293 | 159 | 4 | 2 | 287 | 24 | 316 | 3.91e-75 | 232 |
MS.gene004925.t1 | AT5G19890 | 44.000 | 300 | 149 | 7 | 2 | 287 | 33 | 327 | 4.92e-75 | 233 |
MS.gene004925.t1 | AT1G44970 | 41.946 | 298 | 160 | 6 | 3 | 287 | 49 | 346 | 6.33e-75 | 233 |
MS.gene004925.t1 | AT5G64120 | 38.644 | 295 | 170 | 3 | 1 | 287 | 37 | 328 | 1.05e-74 | 231 |
MS.gene004925.t1 | AT2G22420 | 42.373 | 295 | 158 | 5 | 3 | 287 | 27 | 319 | 1.37e-74 | 231 |
MS.gene004925.t1 | AT3G50990 | 40.741 | 297 | 164 | 5 | 3 | 287 | 45 | 341 | 2.46e-74 | 231 |
MS.gene004925.t1 | AT5G58390 | 43.537 | 294 | 157 | 5 | 2 | 287 | 24 | 316 | 3.27e-74 | 230 |
MS.gene004925.t1 | AT5G58400 | 42.517 | 294 | 160 | 5 | 2 | 287 | 33 | 325 | 3.07e-73 | 228 |
MS.gene004925.t1 | AT2G24800 | 40.333 | 300 | 163 | 5 | 1 | 287 | 33 | 329 | 3.11e-73 | 228 |
MS.gene004925.t1 | AT4G26010 | 40.418 | 287 | 166 | 4 | 3 | 287 | 26 | 309 | 1.54e-72 | 225 |
MS.gene004925.t1 | AT4G26010 | 40.418 | 287 | 166 | 4 | 3 | 287 | 54 | 337 | 2.93e-72 | 226 |
MS.gene004925.t1 | AT5G15180 | 40.741 | 297 | 165 | 5 | 1 | 287 | 34 | 329 | 3.08e-72 | 225 |
MS.gene004925.t1 | AT5G39580 | 39.527 | 296 | 167 | 4 | 1 | 287 | 27 | 319 | 3.85e-72 | 225 |
MS.gene004925.t1 | AT5G40150 | 42.953 | 298 | 156 | 6 | 1 | 287 | 34 | 328 | 6.96e-72 | 224 |
MS.gene004925.t1 | AT1G77100 | 40.000 | 295 | 168 | 5 | 1 | 287 | 26 | 319 | 6.99e-72 | 224 |
MS.gene004925.t1 | AT4G17690 | 41.497 | 294 | 164 | 4 | 2 | 287 | 29 | 322 | 8.98e-72 | 224 |
MS.gene004925.t1 | AT2G41480 | 41.333 | 300 | 159 | 6 | 2 | 287 | 32 | 328 | 1.10e-71 | 224 |
MS.gene004925.t1 | AT4G31760 | 38.255 | 298 | 169 | 4 | 2 | 287 | 32 | 326 | 5.02e-71 | 222 |
MS.gene004925.t1 | AT1G14550 | 40.956 | 293 | 166 | 5 | 2 | 287 | 29 | 321 | 7.20e-71 | 221 |
MS.gene004925.t1 | AT1G14540 | 41.638 | 293 | 163 | 6 | 2 | 287 | 24 | 315 | 9.40e-71 | 221 |
MS.gene004925.t1 | AT1G49570 | 42.905 | 296 | 153 | 7 | 3 | 283 | 52 | 346 | 6.11e-70 | 220 |
MS.gene004925.t1 | AT5G14130 | 39.597 | 298 | 166 | 6 | 2 | 287 | 35 | 330 | 2.46e-68 | 215 |
MS.gene004925.t1 | AT5G14130 | 39.597 | 298 | 166 | 6 | 2 | 287 | 76 | 371 | 3.95e-68 | 216 |
MS.gene004925.t1 | AT5G47000 | 40.678 | 295 | 166 | 5 | 2 | 287 | 36 | 330 | 7.86e-68 | 214 |
MS.gene004925.t1 | AT2G38380 | 40.532 | 301 | 163 | 8 | 2 | 287 | 34 | 333 | 2.82e-67 | 213 |
MS.gene004925.t1 | AT4G33870 | 36.170 | 329 | 165 | 4 | 2 | 285 | 71 | 399 | 3.85e-67 | 214 |
MS.gene004925.t1 | AT4G08770 | 40.532 | 301 | 164 | 6 | 2 | 287 | 27 | 327 | 8.23e-67 | 212 |
MS.gene004925.t1 | AT4G08780 | 40.199 | 301 | 165 | 6 | 2 | 287 | 27 | 327 | 8.97e-67 | 212 |
MS.gene004925.t1 | AT1G34510 | 38.889 | 288 | 169 | 5 | 3 | 287 | 26 | 309 | 1.84e-66 | 210 |
MS.gene004925.t1 | AT2G18980 | 38.667 | 300 | 166 | 6 | 2 | 287 | 28 | 323 | 2.62e-66 | 210 |
MS.gene004925.t1 | AT4G25980 | 38.206 | 301 | 170 | 6 | 1 | 287 | 28 | 326 | 1.41e-65 | 208 |
MS.gene004925.t1 | AT2G39040 | 39.216 | 306 | 164 | 8 | 1 | 287 | 48 | 350 | 7.32e-65 | 207 |
MS.gene004925.t1 | AT4G37530 | 37.000 | 300 | 175 | 5 | 2 | 287 | 30 | 329 | 2.01e-64 | 205 |
MS.gene004925.t1 | AT2G38390 | 38.870 | 301 | 168 | 8 | 2 | 287 | 34 | 333 | 2.57e-64 | 206 |
MS.gene004925.t1 | AT4G37520 | 37.000 | 300 | 175 | 5 | 2 | 287 | 30 | 329 | 2.60e-64 | 205 |
MS.gene004925.t1 | AT2G34060 | 39.130 | 299 | 166 | 8 | 2 | 284 | 45 | 343 | 6.79e-64 | 204 |
MS.gene004925.t1 | AT3G49110 | 39.333 | 300 | 167 | 6 | 3 | 287 | 37 | 336 | 1.14e-63 | 204 |
MS.gene004925.t1 | AT3G49120 | 39.333 | 300 | 167 | 6 | 3 | 287 | 36 | 335 | 2.47e-63 | 203 |
MS.gene004925.t1 | AT3G49960 | 38.127 | 299 | 171 | 6 | 3 | 287 | 31 | 329 | 2.71e-62 | 200 |
MS.gene004925.t1 | AT4G37520 | 36.667 | 300 | 173 | 6 | 2 | 287 | 30 | 326 | 3.76e-62 | 199 |
MS.gene004925.t1 | AT3G32980 | 39.203 | 301 | 166 | 7 | 3 | 287 | 35 | 334 | 6.67e-62 | 199 |
MS.gene004925.t1 | AT4G30170 | 35.452 | 299 | 175 | 6 | 3 | 287 | 31 | 325 | 3.05e-61 | 197 |
MS.gene004925.t1 | AT5G67400 | 37.333 | 300 | 174 | 5 | 2 | 287 | 30 | 329 | 5.97e-61 | 196 |
MS.gene004925.t1 | AT5G64110 | 38.047 | 297 | 168 | 7 | 3 | 287 | 38 | 330 | 1.53e-60 | 195 |
MS.gene004925.t1 | AT5G64100 | 36.364 | 297 | 175 | 5 | 1 | 287 | 39 | 331 | 2.00e-60 | 195 |
MS.gene004925.t1 | AT1G30870 | 37.500 | 296 | 173 | 4 | 1 | 287 | 53 | 345 | 5.87e-60 | 194 |
MS.gene004925.t1 | AT1G24110 | 37.248 | 298 | 175 | 6 | 2 | 287 | 25 | 322 | 9.29e-57 | 186 |
MS.gene004925.t1 | AT5G22410 | 38.255 | 298 | 165 | 8 | 1 | 284 | 30 | 322 | 4.62e-56 | 184 |
MS.gene004925.t1 | AT2G35380 | 42.915 | 247 | 120 | 7 | 60 | 287 | 3 | 247 | 5.03e-55 | 179 |
MS.gene004925.t1 | AT4G21960 | 34.021 | 291 | 184 | 3 | 1 | 283 | 33 | 323 | 2.36e-54 | 179 |
MS.gene004925.t1 | AT3G17070 | 34.448 | 299 | 183 | 4 | 2 | 287 | 41 | 339 | 3.39e-53 | 177 |
MS.gene004925.t1 | AT5G24070 | 34.323 | 303 | 179 | 5 | 1 | 287 | 37 | 335 | 6.54e-53 | 176 |
MS.gene004925.t1 | AT4G37530 | 37.549 | 253 | 144 | 5 | 2 | 240 | 30 | 282 | 1.48e-52 | 173 |
MS.gene004925.t1 | AT2G43480 | 33.003 | 303 | 183 | 5 | 1 | 287 | 37 | 335 | 2.81e-50 | 169 |
MS.gene004925.t1 | AT2G37130 | 31.757 | 296 | 193 | 4 | 1 | 287 | 1 | 296 | 6.12e-49 | 164 |
MS.gene004925.t1 | AT2G37130 | 31.757 | 296 | 193 | 4 | 1 | 287 | 32 | 327 | 1.81e-48 | 164 |
MS.gene004925.t1 | AT4G25980 | 43.293 | 164 | 91 | 1 | 1 | 164 | 73 | 234 | 1.78e-45 | 155 |
MS.gene004925.t1 | AT2G24800 | 45.399 | 163 | 85 | 2 | 1 | 162 | 33 | 192 | 1.67e-44 | 151 |
MS.gene004925.t1 | AT5G39580 | 43.636 | 165 | 90 | 1 | 1 | 165 | 27 | 188 | 5.80e-44 | 150 |
MS.gene004925.t1 | AT3G17070 | 31.387 | 274 | 174 | 5 | 27 | 287 | 4 | 276 | 8.47e-39 | 137 |
MS.gene004925.t1 | AT4G32320 | 28.467 | 274 | 127 | 10 | 11 | 266 | 97 | 319 | 6.59e-17 | 79.7 |
MS.gene004925.t1 | AT1G77490 | 28.958 | 259 | 143 | 11 | 33 | 272 | 106 | 342 | 2.02e-14 | 73.2 |
MS.gene004925.t1 | AT1G77490 | 28.958 | 259 | 143 | 11 | 33 | 272 | 106 | 342 | 2.23e-14 | 73.2 |
MS.gene004925.t1 | AT4G35970 | 29.259 | 270 | 138 | 11 | 11 | 269 | 13 | 240 | 5.24e-14 | 70.9 |
MS.gene004925.t1 | AT3G42570 | 30.556 | 108 | 71 | 2 | 60 | 164 | 43 | 149 | 9.13e-12 | 62.4 |
MS.gene004925.t1 | AT4G35970 | 29.600 | 250 | 123 | 11 | 11 | 249 | 13 | 220 | 1.37e-11 | 63.2 |
Find 59 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCATCCTTTCTACCTTT+AGG | 0.226072 | 1.4:-63195753 | None:intergenic |
TCACAATGTTTCTTGTTCTT+AGG | 0.253812 | 1.4:-63196225 | None:intergenic |
TTCTGCTGTATTATCCTTAG+TGG | 0.329301 | 1.4:-63195314 | None:intergenic |
CCTCTTAGACTCAAATTTGC+TGG | 0.371420 | 1.4:-63195346 | None:intergenic |
CTATCAAGAACATGTACTTC+TGG | 0.371534 | 1.4:+63196088 | MS.gene004925:CDS |
TTCACTATGTCCTTAACAAC+TGG | 0.383944 | 1.4:-63194430 | None:intergenic |
TTAACAACTGGTTCAACAAA+AGG | 0.406122 | 1.4:-63194418 | None:intergenic |
AAGCCAAGTGGATCCAGCTT+TGG | 0.413980 | 1.4:+63196045 | MS.gene004925:CDS |
TCAACAAGCCATGGTGAAGA+TGG | 0.422355 | 1.4:+63196288 | MS.gene004925:CDS |
TCCGAGCTCATCACGCAGTT+TGG | 0.424446 | 1.4:+63195828 | MS.gene004925:CDS |
CCAGCAAATTTGAGTCTAAG+AGG | 0.430332 | 1.4:+63195346 | MS.gene004925:CDS |
CCATGGCTTGTTGAAAATCA+AGG | 0.430802 | 1.4:-63196279 | None:intergenic |
GATATTAAACAAGGTTCAAA+TGG | 0.431399 | 1.4:+63196319 | MS.gene004925:CDS |
ATGTGCTGATATTCTTGCTA+TGG | 0.434317 | 1.4:+63195429 | MS.gene004925:CDS |
GGACATAGTGAATAGAGCTT+TGG | 0.440304 | 1.4:+63194441 | MS.gene004925:CDS |
CAAGAGATGGTCGCTCTATC+CGG | 0.442185 | 1.4:+63195870 | MS.gene004925:CDS |
TAAGGATAATACAGCAGAAA+AGG | 0.444182 | 1.4:+63195318 | MS.gene004925:CDS |
TTTGTCCCCTAGGGATGTGA+TGG | 0.449539 | 1.4:+63195274 | MS.gene004925:intron |
CTTTGGATTCAGAATTTGCC+AGG | 0.451170 | 1.4:+63196062 | MS.gene004925:CDS |
CTTCCATGACTGCTTCATAC+AGG | 0.455801 | 1.4:+63194504 | MS.gene004925:CDS |
TCGTTCCTAGTTGCATCAAA+TGG | 0.467823 | 1.4:-63196127 | None:intergenic |
CAACAAGCCATGGTGAAGAT+GGG | 0.482582 | 1.4:+63196289 | MS.gene004925:CDS |
TAACATACCTAAAGGTAGAA+AGG | 0.492130 | 1.4:+63195746 | MS.gene004925:CDS |
GCAAATTCTGAATCCAAAGC+TGG | 0.507065 | 1.4:-63196058 | None:intergenic |
AATTCTGCTTGATTCCACTA+AGG | 0.524922 | 1.4:+63195300 | MS.gene004925:CDS |
TAACAACTGGTTCAACAAAA+GGG | 0.527365 | 1.4:-63194417 | None:intergenic |
TTGTCCCCTAGGGATGTGAT+GGG | 0.528369 | 1.4:+63195275 | MS.gene004925:intron |
TCAGCACATGAAACCACGCC+AGG | 0.530493 | 1.4:-63195415 | None:intergenic |
GAGCTTGAAAACCGATGCCC+TGG | 0.541064 | 1.4:+63195397 | MS.gene004925:CDS |
AATCAAGGAAGAACATGGCT+TGG | 0.543185 | 1.4:-63196264 | None:intergenic |
CCAGTGTATAACATACCTAA+AGG | 0.544678 | 1.4:+63195738 | MS.gene004925:CDS |
TTCTTATAAGAGCAGCTGCA+AGG | 0.544991 | 1.4:-63194477 | None:intergenic |
ATCACGCAGTTTGGTCAACA+TGG | 0.546453 | 1.4:+63195837 | MS.gene004925:CDS |
ATACCTAAAGGTAGAAAGGA+TGG | 0.552044 | 1.4:+63195750 | MS.gene004925:CDS |
AGCTCGGATGCATTAAAAGA+AGG | 0.555115 | 1.4:-63195813 | None:intergenic |
TTGAAAATCAAGGAAGAACA+TGG | 0.555938 | 1.4:-63196269 | None:intergenic |
TCTTACGTAGAAAACTGCTT+CGG | 0.565409 | 1.4:-63195458 | None:intergenic |
TATAAGAGCAGCTGCAAGGG+TGG | 0.568217 | 1.4:-63194473 | None:intergenic |
GAACCTGTATGAAGCAGTCA+TGG | 0.568430 | 1.4:-63194507 | None:intergenic |
TCTTATAAGAGCAGCTGCAA+GGG | 0.569116 | 1.4:-63194476 | None:intergenic |
ACATGTTCTTGATAGTGTCC+TGG | 0.570162 | 1.4:-63196080 | None:intergenic |
AATCCAAAGCTGGATCCACT+TGG | 0.576508 | 1.4:-63196048 | None:intergenic |
ACCAAACTGCGTGATGAGCT+CGG | 0.577150 | 1.4:-63195829 | None:intergenic |
CCTTTAGGTATGTTATACAC+TGG | 0.588884 | 1.4:-63195738 | None:intergenic |
ATGAAACCACGCCAGGGCAT+CGG | 0.597007 | 1.4:-63195408 | None:intergenic |
GGTTTGCTTGATATTAAACA+AGG | 0.599211 | 1.4:+63196310 | MS.gene004925:CDS |
TTTACTTCAACGCTTTGTTG+AGG | 0.600285 | 1.4:+63196161 | MS.gene004925:CDS |
TGAAAACCGATGCCCTGGCG+TGG | 0.606785 | 1.4:+63195402 | MS.gene004925:CDS |
GATGCATTAAAAGAAGGTGA+TGG | 0.610373 | 1.4:-63195807 | None:intergenic |
CAAGAACAGATTAAGCCAAG+TGG | 0.610606 | 1.4:+63196033 | MS.gene004925:CDS |
ATAAGAGCAGCTGCAAGGGT+GGG | 0.610728 | 1.4:-63194472 | None:intergenic |
TATGCAGGGGCACATACACT+AGG | 0.612698 | 1.4:+63195989 | MS.gene004925:intron |
TACGTAGAAAACTGCTTCGG+TGG | 0.619353 | 1.4:-63195455 | None:intergenic |
CACATACACTAGGAGTGGCA+AGG | 0.657351 | 1.4:+63195999 | MS.gene004925:CDS |
TATTGAATATTGCAGGCTGG+AGG | 0.657358 | 1.4:+63195714 | MS.gene004925:intron |
AACAACCATTTGATGCAACT+AGG | 0.664237 | 1.4:+63196122 | MS.gene004925:CDS |
CAGCACATGAAACCACGCCA+GGG | 0.671985 | 1.4:-63195414 | None:intergenic |
AGGGGCACATACACTAGGAG+TGG | 0.676546 | 1.4:+63195994 | MS.gene004925:intron |
AAGCAAACCCATCTTCACCA+TGG | 0.690111 | 1.4:-63196296 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTAAAAATTAATGTTTAA+TGG | + | chr1.4:63194633-63194652 | MS.gene004925:intron | 10.0% |
!! | CTTAAAAATTAATGTTTAAT+GGG | + | chr1.4:63194634-63194653 | MS.gene004925:intron | 10.0% |
!!! | ATTAAACATTAATTTTTAAG+TGG | - | chr1.4:63194634-63194653 | None:intergenic | 10.0% |
!!! | TTTTTGTTTATAATTACAAA+CGG | - | chr1.4:63195919-63195938 | None:intergenic | 10.0% |
!! | ATATAATAAACTTGTCTTAA+TGG | + | chr1.4:63195482-63195501 | MS.gene004925:intron | 15.0% |
!! | ATGATTGATTGATATAAAAT+TGG | + | chr1.4:63195655-63195674 | MS.gene004925:intron | 15.0% |
!! | TAACTATATAATGTAGAAAA+TGG | - | chr1.4:63195217-63195236 | None:intergenic | 15.0% |
!! | TGAATTATATATTATATGCA+GGG | + | chr1.4:63195975-63195994 | MS.gene004925:intron | 15.0% |
!!! | TTACATTAAATTACTTGTTT+TGG | + | chr1.4:63194754-63194773 | MS.gene004925:intron | 15.0% |
!! | AATGAAATATTGAATATTGC+AGG | + | chr1.4:63195707-63195726 | MS.gene004925:intron | 20.0% |
!! | ATGAAACTCTACATATTTAT+AGG | - | chr1.4:63195527-63195546 | None:intergenic | 20.0% |
!! | CTGAATTATATATTATATGC+AGG | + | chr1.4:63195974-63195993 | MS.gene004925:intron | 20.0% |
!! | CTGCATATAATATATAATTC+AGG | - | chr1.4:63195976-63195995 | None:intergenic | 20.0% |
!! | GAATTATATATTATATGCAG+GGG | + | chr1.4:63195976-63195995 | MS.gene004925:intron | 20.0% |
!! | TAAACTCATACTATAAAACA+TGG | - | chr1.4:63194819-63194838 | None:intergenic | 20.0% |
! | CCTAATCCAAAATTATAAGA+TGG | - | chr1.4:63194891-63194910 | None:intergenic | 25.0% |
! | CTAATCTTCACTTTACAAAA+CGG | - | chr1.4:63194934-63194953 | None:intergenic | 25.0% |
! | GATATTAAACAAGGTTCAAA+TGG | + | chr1.4:63196319-63196338 | MS.gene004925:CDS | 25.0% |
! | TATAGTTAGTATGTTGTTAC+CGG | - | chr1.4:63195892-63195911 | None:intergenic | 25.0% |
!! | CCATCTTATAATTTTGGATT+AGG | + | chr1.4:63194888-63194907 | MS.gene004925:intron | 25.0% |
!! | CTCATACCATCTTATAATTT+TGG | + | chr1.4:63194882-63194901 | MS.gene004925:intron | 25.0% |
!!! | AAAGTTGATGTATTATATCG+AGG | + | chr1.4:63195949-63195968 | MS.gene004925:intron | 25.0% |
AAATATTGAATATTGCAGGC+TGG | + | chr1.4:63195711-63195730 | MS.gene004925:intron | 30.0% | |
AATGATAAACAGTGCTTTCA+GGG | - | chr1.4:63194794-63194813 | None:intergenic | 30.0% | |
ACATGTCGTTATAGTTAACA+AGG | - | chr1.4:63195587-63195606 | None:intergenic | 30.0% | |
ATGTCTAACAAAAGTCTACT+TGG | + | chr1.4:63195603-63195622 | MS.gene004925:intron | 30.0% | |
CATCAATCAACTACAACTAT+AGG | + | chr1.4:63195163-63195182 | MS.gene004925:intron | 30.0% | |
TAACATACCTAAAGGTAGAA+AGG | + | chr1.4:63195746-63195765 | MS.gene004925:CDS | 30.0% | |
TAAGGATAATACAGCAGAAA+AGG | + | chr1.4:63195318-63195337 | MS.gene004925:CDS | 30.0% | |
TCACAATGTTTCTTGTTCTT+AGG | - | chr1.4:63196228-63196247 | None:intergenic | 30.0% | |
TGGAAGAAGATCAAAAATAG+AGG | + | chr1.4:63195770-63195789 | MS.gene004925:CDS | 30.0% | |
TTGAAAATCAAGGAAGAACA+TGG | - | chr1.4:63196272-63196291 | None:intergenic | 30.0% | |
! | CGTTTTGTAAAGTGAAGATT+AGG | + | chr1.4:63194932-63194951 | MS.gene004925:intron | 30.0% |
! | GGTTTGCTTGATATTAAACA+AGG | + | chr1.4:63196310-63196329 | MS.gene004925:CDS | 30.0% |
! | TAACAACTGGTTCAACAAAA+GGG | - | chr1.4:63194420-63194439 | None:intergenic | 30.0% |
! | TTAACAACTGGTTCAACAAA+AGG | - | chr1.4:63194421-63194440 | None:intergenic | 30.0% |
! | TTTTGTTGAACCAGTTGTTA+AGG | + | chr1.4:63194420-63194439 | MS.gene004925:CDS | 30.0% |
!!! | TTGTTTATTTTTGTCCCCTA+GGG | + | chr1.4:63195265-63195284 | MS.gene004925:intron | 30.0% |
!!! | TTTGTTTATTTTTGTCCCCT+AGG | + | chr1.4:63195264-63195283 | MS.gene004925:intron | 30.0% |
AACAACCATTTGATGCAACT+AGG | + | chr1.4:63196122-63196141 | MS.gene004925:CDS | 35.0% | |
AATTCTGCTTGATTCCACTA+AGG | + | chr1.4:63195300-63195319 | MS.gene004925:CDS | 35.0% | |
ATACCTAAAGGTAGAAAGGA+TGG | + | chr1.4:63195750-63195769 | MS.gene004925:CDS | 35.0% | |
CCAGTGTATAACATACCTAA+AGG | + | chr1.4:63195738-63195757 | MS.gene004925:CDS | 35.0% | |
CCTTTAGGTATGTTATACAC+TGG | - | chr1.4:63195741-63195760 | None:intergenic | 35.0% | |
CTATCAAGAACATGTACTTC+TGG | + | chr1.4:63196088-63196107 | MS.gene004925:CDS | 35.0% | |
GAATGATAAACAGTGCTTTC+AGG | - | chr1.4:63194795-63194814 | None:intergenic | 35.0% | |
GATGCATTAAAAGAAGGTGA+TGG | - | chr1.4:63195810-63195829 | None:intergenic | 35.0% | |
TATTGCACGACACACATATA+CGG | - | chr1.4:63195137-63195156 | None:intergenic | 35.0% | |
TCTTACGTAGAAAACTGCTT+CGG | - | chr1.4:63195461-63195480 | None:intergenic | 35.0% | |
TTCACTATGTCCTTAACAAC+TGG | - | chr1.4:63194433-63194452 | None:intergenic | 35.0% | |
TTCCTTAATCATTGCTCTGA+GGG | - | chr1.4:63194675-63194694 | None:intergenic | 35.0% | |
TTCTGCTGTATTATCCTTAG+TGG | - | chr1.4:63195317-63195336 | None:intergenic | 35.0% | |
TTTCCTTAATCATTGCTCTG+AGG | - | chr1.4:63194676-63194695 | None:intergenic | 35.0% | |
! | AACGCTTTGTTGAGGAAAAA+TGG | + | chr1.4:63196169-63196188 | MS.gene004925:CDS | 35.0% |
! | ATGTGCTGATATTCTTGCTA+TGG | + | chr1.4:63195429-63195448 | MS.gene004925:CDS | 35.0% |
! | TTTACTTCAACGCTTTGTTG+AGG | + | chr1.4:63196161-63196180 | MS.gene004925:CDS | 35.0% |
AATCAAGGAAGAACATGGCT+TGG | - | chr1.4:63196267-63196286 | None:intergenic | 40.0% | |
AATGTAGAGAGAGAGAGAGA+GGG | - | chr1.4:63194548-63194567 | None:intergenic | 40.0% | |
AGCTCGGATGCATTAAAAGA+AGG | - | chr1.4:63195816-63195835 | None:intergenic | 40.0% | |
ATGTTGCATGCATACATGCA+TGG | + | chr1.4:63194607-63194626 | MS.gene004925:intron | 40.0% | |
CAAGAACAGATTAAGCCAAG+TGG | + | chr1.4:63196033-63196052 | MS.gene004925:CDS | 40.0% | |
CCAGCAAATTTGAGTCTAAG+AGG | + | chr1.4:63195346-63195365 | MS.gene004925:CDS | 40.0% | |
CCTCTTAGACTCAAATTTGC+TGG | - | chr1.4:63195349-63195368 | None:intergenic | 40.0% | |
CTTCCATCCTTTCTACCTTT+AGG | - | chr1.4:63195756-63195775 | None:intergenic | 40.0% | |
CTTTGGATTCAGAATTTGCC+AGG | + | chr1.4:63196062-63196081 | MS.gene004925:CDS | 40.0% | |
GCAAATTCTGAATCCAAAGC+TGG | - | chr1.4:63196061-63196080 | None:intergenic | 40.0% | |
GGACATAGTGAATAGAGCTT+TGG | + | chr1.4:63194441-63194460 | MS.gene004925:CDS | 40.0% | |
TATTGAATATTGCAGGCTGG+AGG | + | chr1.4:63195714-63195733 | MS.gene004925:intron | 40.0% | |
TCGTTCCTAGTTGCATCAAA+TGG | - | chr1.4:63196130-63196149 | None:intergenic | 40.0% | |
TCTTATAAGAGCAGCTGCAA+GGG | - | chr1.4:63194479-63194498 | None:intergenic | 40.0% | |
TTCTTATAAGAGCAGCTGCA+AGG | - | chr1.4:63194480-63194499 | None:intergenic | 40.0% | |
! | CCTTGATTTTCAACAAGCCA+TGG | + | chr1.4:63196279-63196298 | MS.gene004925:CDS | 40.0% |
! | TGGTTTTTCTGCACAAGAGA+TGG | + | chr1.4:63195857-63195876 | MS.gene004925:CDS | 40.0% |
!! | ACATGTTCTTGATAGTGTCC+TGG | - | chr1.4:63196083-63196102 | None:intergenic | 40.0% |
!! | CCATGGCTTGTTGAAAATCA+AGG | - | chr1.4:63196282-63196301 | None:intergenic | 40.0% |
AAACAGTGCTTTCAGGGCAT+TGG | - | chr1.4:63194788-63194807 | None:intergenic | 45.0% | |
AAGCAAACCCATCTTCACCA+TGG | - | chr1.4:63196299-63196318 | None:intergenic | 45.0% | |
AATCCAAAGCTGGATCCACT+TGG | - | chr1.4:63196051-63196070 | None:intergenic | 45.0% | |
AATTGACCCATCACATCCCT+AGG | - | chr1.4:63195284-63195303 | None:intergenic | 45.0% | |
ATCACGCAGTTTGGTCAACA+TGG | + | chr1.4:63195837-63195856 | MS.gene004925:CDS | 45.0% | |
ATTGACCCATCACATCCCTA+GGG | - | chr1.4:63195283-63195302 | None:intergenic | 45.0% | |
CAACAAGCCATGGTGAAGAT+GGG | + | chr1.4:63196289-63196308 | MS.gene004925:CDS | 45.0% | |
CTTCCATGACTGCTTCATAC+AGG | + | chr1.4:63194504-63194523 | MS.gene004925:CDS | 45.0% | |
GAACCTGTATGAAGCAGTCA+TGG | - | chr1.4:63194510-63194529 | None:intergenic | 45.0% | |
GAATGTAGAGAGAGAGAGAG+AGG | - | chr1.4:63194549-63194568 | None:intergenic | 45.0% | |
GCATGAGACACTCAAACACA+TGG | + | chr1.4:63194571-63194590 | MS.gene004925:intron | 45.0% | |
TACGTAGAAAACTGCTTCGG+TGG | - | chr1.4:63195458-63195477 | None:intergenic | 45.0% | |
TCAACAAGCCATGGTGAAGA+TGG | + | chr1.4:63196288-63196307 | MS.gene004925:CDS | 45.0% | |
TGAGACACTCAAACACATGG+TGG | + | chr1.4:63194574-63194593 | MS.gene004925:intron | 45.0% | |
TGCCCTCAGAGCAATGATTA+AGG | + | chr1.4:63194670-63194689 | MS.gene004925:intron | 45.0% | |
AAGCCAAGTGGATCCAGCTT+TGG | + | chr1.4:63196045-63196064 | MS.gene004925:CDS | 50.0% | |
ACCAAACTGCGTGATGAGCT+CGG | - | chr1.4:63195832-63195851 | None:intergenic | 50.0% | |
AGAGAGAGAGGGAGAGAGAA+GGG | - | chr1.4:63194537-63194556 | None:intergenic | 50.0% | |
AGCAACCACTGACGTCGTAT+TGG | - | chr1.4:63195086-63195105 | None:intergenic | 50.0% | |
ATAAGAGCAGCTGCAAGGGT+GGG | - | chr1.4:63194475-63194494 | None:intergenic | 50.0% | |
CAAGAGATGGTCGCTCTATC+CGG | + | chr1.4:63195870-63195889 | MS.gene004925:CDS | 50.0% | |
CACATACACTAGGAGTGGCA+AGG | + | chr1.4:63195999-63196018 | MS.gene004925:CDS | 50.0% | |
TATAAGAGCAGCTGCAAGGG+TGG | - | chr1.4:63194476-63194495 | None:intergenic | 50.0% | |
TGCACGACACACATATACGG+TGG | - | chr1.4:63195134-63195153 | None:intergenic | 50.0% | |
TTGACCCATCACATCCCTAG+GGG | - | chr1.4:63195282-63195301 | None:intergenic | 50.0% | |
TTGTCCCCTAGGGATGTGAT+GGG | + | chr1.4:63195275-63195294 | MS.gene004925:intron | 50.0% | |
TTTGTCCCCTAGGGATGTGA+TGG | + | chr1.4:63195274-63195293 | MS.gene004925:intron | 50.0% | |
! | TATGCAGGGGCACATACACT+AGG | + | chr1.4:63195989-63196008 | MS.gene004925:intron | 50.0% |
!! | AATCATTGCTCTGAGGGCAC+TGG | - | chr1.4:63194669-63194688 | None:intergenic | 50.0% |
ATGAAACCACGCCAGGGCAT+CGG | - | chr1.4:63195411-63195430 | None:intergenic | 55.0% | |
CAGCACATGAAACCACGCCA+GGG | - | chr1.4:63195417-63195436 | None:intergenic | 55.0% | |
CCATGCCAATACGACGTCAG+TGG | + | chr1.4:63195078-63195097 | MS.gene004925:intron | 55.0% | |
GAGAGAGAGAGGGAGAGAGA+AGG | - | chr1.4:63194538-63194557 | None:intergenic | 55.0% | |
GAGAGAGAGGGAGAGAGAAG+GGG | - | chr1.4:63194536-63194555 | None:intergenic | 55.0% | |
GAGCTTGAAAACCGATGCCC+TGG | + | chr1.4:63195397-63195416 | MS.gene004925:CDS | 55.0% | |
TCAGCACATGAAACCACGCC+AGG | - | chr1.4:63195418-63195437 | None:intergenic | 55.0% | |
TCCGAGCTCATCACGCAGTT+TGG | + | chr1.4:63195828-63195847 | MS.gene004925:CDS | 55.0% | |
! | AGGGGCACATACACTAGGAG+TGG | + | chr1.4:63195994-63196013 | MS.gene004925:intron | 55.0% |
! | CCACTGACGTCGTATTGGCA+TGG | - | chr1.4:63195081-63195100 | None:intergenic | 55.0% |
TGAAAACCGATGCCCTGGCG+TGG | + | chr1.4:63195402-63195421 | MS.gene004925:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 63194394 | 63196375 | 63194394 | ID=MS.gene004925 |
chr1.4 | mRNA | 63194394 | 63196375 | 63194394 | ID=MS.gene004925.t1;Parent=MS.gene004925 |
chr1.4 | exon | 63194394 | 63194525 | 63194394 | ID=MS.gene004925.t1.exon1;Parent=MS.gene004925.t1 |
chr1.4 | CDS | 63194394 | 63194525 | 63194394 | ID=cds.MS.gene004925.t1;Parent=MS.gene004925.t1 |
chr1.4 | exon | 63195286 | 63195474 | 63195286 | ID=MS.gene004925.t1.exon2;Parent=MS.gene004925.t1 |
chr1.4 | CDS | 63195286 | 63195474 | 63195286 | ID=cds.MS.gene004925.t1;Parent=MS.gene004925.t1 |
chr1.4 | exon | 63195729 | 63195891 | 63195729 | ID=MS.gene004925.t1.exon3;Parent=MS.gene004925.t1 |
chr1.4 | CDS | 63195729 | 63195891 | 63195729 | ID=cds.MS.gene004925.t1;Parent=MS.gene004925.t1 |
chr1.4 | exon | 63195996 | 63196375 | 63195996 | ID=MS.gene004925.t1.exon4;Parent=MS.gene004925.t1 |
chr1.4 | CDS | 63195996 | 63196375 | 63195996 | ID=cds.MS.gene004925.t1;Parent=MS.gene004925.t1 |
Gene Sequence |
Protein sequence |