AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24118

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24118.t1 MTR_1g025720 97.764 313 7 0 1 313 46 358 0.0 637
MS.gene24118.t1 MTR_1g025700 77.885 312 69 0 1 312 59 370 0.0 530
MS.gene24118.t1 MTR_1g025680 70.382 314 92 1 1 313 43 356 9.69e-169 476
MS.gene24118.t1 MTR_3g114090 67.093 313 102 1 1 312 45 357 2.98e-158 446
MS.gene24118.t1 MTR_1g025760 66.454 313 104 1 2 313 90 402 2.73e-156 443
MS.gene24118.t1 MTR_1g025780 62.300 313 117 1 1 313 50 361 1.95e-153 434
MS.gene24118.t1 MTR_3g114120 60.841 309 121 0 1 309 56 364 3.33e-147 419
MS.gene24118.t1 MTR_5g022630 53.968 315 142 3 1 312 52 366 8.45e-120 349
MS.gene24118.t1 MTR_8g075230 51.118 313 152 1 1 312 45 357 2.32e-118 345
MS.gene24118.t1 MTR_5g022640 50.000 314 155 2 1 312 52 365 7.57e-115 336
MS.gene24118.t1 MTR_8g075200 49.201 313 158 1 1 312 50 362 1.46e-107 319
MS.gene24118.t1 MTR_8g075220 48.589 319 158 3 1 313 49 367 5.95e-107 316
MS.gene24118.t1 MTR_1g025910 42.308 312 177 3 2 312 46 355 4.62e-87 266
MS.gene24118.t1 MTR_5g084750 41.695 295 171 1 1 294 39 333 1.01e-84 259
MS.gene24118.t1 MTR_5g074270 41.528 301 173 2 1 298 42 342 4.67e-83 255
MS.gene24118.t1 MTR_3g464730 39.683 315 188 2 1 313 37 351 2.05e-82 253
MS.gene24118.t1 MTR_4g087985 39.286 308 179 2 1 300 45 352 1.07e-81 252
MS.gene24118.t1 MTR_5g084770 40.000 315 185 3 1 312 37 350 2.27e-81 250
MS.gene24118.t1 MTR_3g082830 39.241 316 187 3 1 313 47 360 4.38e-80 247
MS.gene24118.t1 MTR_4g056280 41.391 302 176 1 1 301 39 340 6.45e-80 247
MS.gene24118.t1 MTR_8g014910 40.924 303 177 2 1 301 41 343 6.45e-79 244
MS.gene24118.t1 MTR_2g084585 40.066 302 180 1 1 301 39 340 3.72e-77 239
MS.gene24118.t1 MTR_5g084790 37.580 314 195 1 1 313 41 354 1.06e-76 238
MS.gene24118.t1 MTR_2g015080 38.387 310 181 4 1 300 47 356 5.89e-76 237
MS.gene24118.t1 MTR_2g100620 39.274 303 182 2 1 301 40 342 6.56e-76 236
MS.gene24118.t1 MTR_5g083040 36.760 321 193 4 1 313 41 359 2.58e-71 225
MS.gene24118.t1 MTR_4g056160 38.835 309 179 4 1 302 36 341 1.89e-69 220
MS.gene24118.t1 MTR_8g087890 37.124 299 180 5 1 295 40 334 1.09e-60 197
MS.gene24118.t1 MTR_5g009100 34.211 304 197 3 1 302 55 357 5.03e-59 194
MS.gene24118.t1 MTR_8g079050 35.350 314 192 7 1 305 46 357 1.56e-58 192
MS.gene24118.t1 MTR_0565s0010 34.783 299 188 5 1 295 41 336 3.20e-57 189
MS.gene24118.t1 MTR_1g069175 35.410 305 192 4 1 301 42 345 4.52e-57 188
MS.gene24118.t1 MTR_6g034400 71.545 123 35 0 44 166 3 125 6.31e-57 180
MS.gene24118.t1 MTR_3g024510 34.653 303 192 5 1 300 47 346 1.59e-55 184
MS.gene24118.t1 MTR_7g116520 35.179 307 188 5 1 301 43 344 2.38e-54 181
MS.gene24118.t1 MTR_7g116570 33.882 304 196 4 1 301 43 344 9.46e-54 180
MS.gene24118.t1 MTR_4g035353 35.786 299 187 4 1 296 40 336 9.85e-54 179
MS.gene24118.t1 MTR_5g078210 35.314 303 189 6 2 301 35 333 9.90e-54 179
MS.gene24118.t1 MTR_3g005650 35.906 298 183 6 1 296 39 330 1.48e-53 179
MS.gene24118.t1 MTR_3g005660 33.542 319 198 8 1 310 45 358 5.73e-53 178
MS.gene24118.t1 MTR_3g098270 34.202 307 196 4 1 302 43 348 7.98e-53 178
MS.gene24118.t1 MTR_1g079540 33.333 303 197 4 2 301 41 341 8.78e-53 177
MS.gene24118.t1 MTR_7g116510 34.177 316 201 4 1 310 34 348 9.30e-53 177
MS.gene24118.t1 MTR_6g021530 34.754 305 193 5 1 301 38 340 2.54e-52 176
MS.gene24118.t1 MTR_4g108690 31.833 311 205 6 2 308 37 344 2.17e-51 174
MS.gene24118.t1 MTR_1g079530 34.539 304 188 5 1 301 38 333 2.92e-51 173
MS.gene24118.t1 MTR_3g435540 32.154 311 204 6 2 308 33 340 3.01e-51 173
MS.gene24118.t1 MTR_4g019880 33.660 306 196 5 1 301 41 344 3.26e-51 173
MS.gene24118.t1 MTR_2g033920 34.314 306 193 5 1 301 44 346 3.36e-49 168
MS.gene24118.t1 MTR_7g116500 32.566 304 200 4 1 301 42 343 4.16e-49 167
MS.gene24118.t1 MTR_1g024890 33.660 306 192 5 2 301 42 342 4.98e-49 167
MS.gene24118.t1 MTR_3g052480 33.981 309 192 6 1 301 42 346 1.53e-48 166
MS.gene24118.t1 MTR_2g033930 33.333 300 192 6 1 296 41 336 1.60e-48 166
MS.gene24118.t1 MTR_1108s0010 38.942 208 115 2 95 301 3 199 2.87e-48 161
MS.gene24118.t1 MTR_4g122200 33.548 310 197 7 1 305 44 349 4.96e-48 165
MS.gene24118.t1 MTR_3g052490 33.117 308 195 5 1 301 41 344 7.94e-45 156
MS.gene24118.t1 MTR_8g087870 31.046 306 195 7 2 304 39 331 1.02e-43 153
MS.gene24118.t1 MTR_7g008060 29.967 307 191 6 1 301 42 330 9.42e-43 150
MS.gene24118.t1 MTR_2g017875 30.794 315 201 8 2 311 44 346 2.80e-42 149
MS.gene24118.t1 MTR_2g017955 33.000 300 183 10 2 295 43 330 1.34e-41 148
MS.gene24118.t1 MTR_3g023220 31.457 302 187 9 2 299 43 328 1.79e-41 147
MS.gene24118.t1 MTR_2g017925 33.445 299 179 10 2 295 43 326 2.42e-40 145
MS.gene24118.t1 MTR_2g017965 32.686 309 190 12 2 304 43 339 3.33e-40 144
MS.gene24118.t1 MTR_2g044100 31.169 308 195 7 1 298 52 352 6.59e-40 144
MS.gene24118.t1 MTR_3g052580 32.258 310 194 7 1 301 37 339 2.71e-39 142
MS.gene24118.t1 MTR_3g052580 32.258 310 194 7 1 301 36 338 3.46e-39 142
MS.gene24118.t1 MTR_5g093090 31.392 309 199 6 1 301 37 340 6.57e-39 140
MS.gene24118.t1 MTR_5g078210 32.180 289 182 7 2 286 35 313 7.86e-39 139
MS.gene24118.t1 MTR_8g031420 29.967 307 196 8 2 300 45 340 1.19e-38 140
MS.gene24118.t1 MTR_8g031390 29.808 312 191 9 1 300 46 341 1.61e-38 140
MS.gene24118.t1 MTR_8g022810 30.128 312 200 10 1 302 50 353 1.89e-38 140
MS.gene24118.t1 MTR_8g031430 29.870 308 195 10 2 300 47 342 3.04e-38 139
MS.gene24118.t1 MTR_8g074570 28.797 316 205 7 1 305 47 353 4.40e-38 139
MS.gene24118.t1 MTR_8g031400 30.323 310 197 8 2 303 47 345 4.97e-37 135
MS.gene24118.t1 MTR_0009s0250 31.169 308 184 12 1 299 42 330 2.95e-36 133
MS.gene24118.t1 MTR_2g017915 31.373 306 173 9 2 302 43 316 1.21e-35 132
MS.gene24118.t1 MTR_5g074210 41.481 135 78 1 165 298 64 198 1.35e-35 128
MS.gene24118.t1 MTR_2g033920 34.510 255 160 4 1 251 44 295 2.18e-35 130
MS.gene24118.t1 MTR_8g022790 29.642 307 199 8 2 303 47 341 4.06e-34 128
MS.gene24118.t1 MTR_8g031390 29.137 278 174 8 1 271 46 307 1.13e-31 120
MS.gene24118.t1 MTR_2g461580 28.852 305 194 8 1 299 40 327 7.30e-31 119
MS.gene24118.t1 MTR_8g074580 26.099 364 195 11 2 306 54 402 1.47e-30 119
MS.gene24118.t1 MTR_2g015630 28.793 323 199 12 2 301 41 355 7.06e-29 114
MS.gene24118.t1 MTR_3g021460 29.836 305 191 10 1 299 40 327 1.05e-28 113
MS.gene24118.t1 MTR_8g074560 30.323 310 188 11 2 294 41 339 2.52e-28 112
MS.gene24118.t1 MTR_1g030268 30.000 310 178 12 19 300 64 362 8.87e-28 111
MS.gene24118.t1 MTR_1g030275 29.167 312 182 12 19 302 63 363 2.33e-27 110
MS.gene24118.t1 MTR_2g015580 28.125 320 203 12 2 301 57 369 3.41e-27 110
MS.gene24118.t1 MTR_6g049230 39.669 121 72 1 167 286 74 194 3.40e-26 102
MS.gene24118.t1 MTR_5g087690 28.986 276 184 6 34 301 83 354 3.44e-26 107
MS.gene24118.t1 MTR_4g104240 29.538 325 197 13 2 306 49 361 4.00e-26 107
MS.gene24118.t1 MTR_7g087190 26.688 311 189 12 19 298 67 369 6.95e-26 106
MS.gene24118.t1 MTR_0127s0040 31.818 220 138 6 90 302 4 218 1.35e-25 102
MS.gene24118.t1 MTR_7g113860 26.144 306 193 10 17 296 52 350 1.43e-25 105
MS.gene24118.t1 MTR_4g036375 35.461 141 91 0 1 141 39 179 2.41e-25 100
MS.gene24118.t1 MTR_7g113860 26.230 305 192 10 18 296 59 356 2.43e-25 104
MS.gene24118.t1 MTR_7g033165 28.758 306 182 10 19 296 57 354 3.77e-25 104
MS.gene24118.t1 MTR_1g079590 33.721 172 110 3 2 170 41 211 4.28e-25 100
MS.gene24118.t1 MTR_3g463930 29.254 335 188 13 2 301 54 374 8.38e-25 103
MS.gene24118.t1 MTR_1g030220 28.254 315 181 12 18 300 63 364 1.13e-24 103
MS.gene24118.t1 MTR_8g089805 26.518 313 192 11 18 300 63 367 2.08e-24 102
MS.gene24118.t1 MTR_3g069780 27.900 319 197 11 2 298 40 347 3.74e-24 101
MS.gene24118.t1 MTR_1g030230 28.859 298 178 11 30 300 66 356 4.60e-24 101
MS.gene24118.t1 MTR_4g036385 39.655 116 69 1 187 301 9 124 6.39e-24 95.1
MS.gene24118.t1 MTR_3g463960 29.268 328 190 13 2 301 54 367 1.13e-23 100
MS.gene24118.t1 MTR_3g463950 29.268 328 190 13 2 301 54 367 1.13e-23 100
MS.gene24118.t1 MTR_3g463970 29.268 328 190 13 2 301 54 367 1.13e-23 100
MS.gene24118.t1 MTR_3g463940 29.268 328 190 13 2 301 54 367 1.13e-23 100
MS.gene24118.t1 MTR_6g007100 25.581 301 199 8 15 301 53 342 2.00e-23 99.0
MS.gene24118.t1 MTR_8g022810 32.308 195 123 6 1 192 50 238 2.20e-23 98.6
MS.gene24118.t1 MTR_6g007095 27.331 311 184 10 19 301 65 361 2.89e-23 100
MS.gene24118.t1 MTR_6g007095 25.974 308 181 9 18 301 393 677 2.28e-20 92.0
MS.gene24118.t1 MTR_2g043980 29.310 290 165 11 29 298 68 337 4.21e-23 98.2
MS.gene24118.t1 MTR_1g030265 28.832 274 162 9 56 300 60 329 4.42e-23 98.2
MS.gene24118.t1 MTR_7g116870 26.140 329 202 11 4 301 38 356 5.11e-23 98.2
MS.gene24118.t1 MTR_4g056220 41.346 104 60 1 199 301 74 177 7.14e-23 94.0
MS.gene24118.t1 MTR_1g030340 26.603 312 189 11 19 300 66 367 1.62e-22 97.1
MS.gene24118.t1 MTR_2g079090 27.900 319 191 13 2 301 40 338 1.80e-22 96.3
MS.gene24118.t1 MTR_7g111780 27.368 285 174 12 30 296 71 340 2.24e-22 96.3
MS.gene24118.t1 MTR_3g438030 27.397 292 180 10 29 298 66 347 2.46e-22 96.3
MS.gene24118.t1 MTR_2g079080 27.187 320 192 14 2 301 40 338 3.87e-22 95.5
MS.gene24118.t1 MTR_1g082390 26.073 303 192 10 18 295 55 350 4.96e-22 95.5
MS.gene24118.t1 MTR_6g007090 28.339 307 178 12 18 296 62 354 6.06e-22 95.1
MS.gene24118.t1 MTR_8g028160 26.518 313 191 12 19 301 60 363 6.17e-22 95.1
MS.gene24118.t1 MTR_1g060490 26.154 325 205 13 1 313 46 347 6.48e-22 94.7
MS.gene24118.t1 MTR_0029s0050 27.187 320 192 14 2 301 40 338 2.11e-21 93.6
MS.gene24118.t1 MTR_2g015590 27.523 327 207 12 2 306 41 359 4.27e-21 92.8
MS.gene24118.t1 MTR_5g093090 28.958 259 171 6 1 251 37 290 5.22e-21 91.7
MS.gene24118.t1 MTR_7g033155 25.982 331 184 14 19 301 62 379 6.62e-21 92.4
MS.gene24118.t1 MTR_0029s0100 27.187 320 192 14 2 301 40 338 8.14e-21 91.7
MS.gene24118.t1 MTR_7g104220 26.797 306 187 14 19 307 67 352 1.93e-20 90.5
MS.gene24118.t1 MTR_7g113860 25.830 271 170 8 52 296 17 282 2.85e-20 89.7
MS.gene24118.t1 MTR_8g038680 25.723 311 194 8 19 301 52 353 4.13e-20 90.1
MS.gene24118.t1 MTR_8g089805 25.448 279 172 9 52 300 27 299 3.12e-19 87.0
MS.gene24118.t1 MTR_1g030268 29.880 251 147 11 19 251 64 303 3.95e-19 86.7
MS.gene24118.t1 MTR_2g018015 33.929 168 105 5 11 174 55 220 8.22e-19 85.5
MS.gene24118.t1 MTR_7g033150 25.466 322 176 13 19 296 59 360 1.68e-18 85.5
MS.gene24118.t1 MTR_3g448360 27.077 325 193 13 2 298 39 347 1.15e-17 82.8
MS.gene24118.t1 MTR_1g092690 26.710 307 187 14 1 294 60 341 3.59e-17 81.3
MS.gene24118.t1 MTR_7g111780 26.562 256 153 11 61 296 1 241 4.13e-17 80.1
MS.gene24118.t1 MTR_3g069520 27.869 305 182 12 19 298 54 345 9.85e-17 80.1
MS.gene24118.t1 MTR_2g017925 29.524 210 132 7 90 295 26 223 1.74e-16 78.2
MS.gene24118.t1 MTR_1g060500 25.080 311 198 12 19 310 65 359 2.94e-16 78.6
MS.gene24118.t1 MTR_6g049220 45.570 79 43 0 1 79 39 117 9.86e-15 71.2
MS.gene24118.t1 MTR_2g017895 25.185 270 167 8 40 303 5 245 1.03e-14 73.2
MS.gene24118.t1 MTR_1g092740 26.380 326 194 14 1 307 47 345 1.34e-14 73.9
MS.gene24118.t1 MTR_2g087292 37.097 124 72 4 1 121 42 162 2.20e-14 72.4
MS.gene24118.t1 MTR_8g012540 25.275 273 175 8 19 271 52 315 3.51e-14 72.4
MS.gene24118.t1 MTR_5g084880 28.829 111 79 0 142 252 3 113 3.66e-14 68.9
MS.gene24118.t1 MTR_2g015650 24.667 300 199 10 18 298 59 350 3.93e-14 72.8
MS.gene24118.t1 MTR_5g093090 34.043 141 84 4 1 133 37 176 8.32e-14 69.7
MS.gene24118.t1 MTR_2g015590 26.592 267 171 9 2 251 41 299 1.54e-13 70.5
MS.gene24118.t1 MTR_5g093550 49.091 55 28 0 247 301 75 129 1.76e-12 64.3
MS.gene24118.t1 MTR_2g043990 28.139 231 110 12 29 238 130 325 2.25e-12 67.0
MS.gene24118.t1 MTR_2g015670 24.832 298 187 9 18 298 59 336 4.46e-12 66.2
MS.gene24118.t1 MTR_3g011860 32.110 109 70 2 172 280 217 321 7.80e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24118.t1 AT1G75900 51.274 314 151 2 1 313 52 364 2.61e-121 353
MS.gene24118.t1 AT1G75880 53.035 313 146 1 1 312 61 373 5.62e-121 352
MS.gene24118.t1 AT1G75880 52.866 314 146 2 1 312 61 374 3.82e-119 347
MS.gene24118.t1 AT1G75890 49.839 311 154 2 1 309 56 366 1.62e-117 343
MS.gene24118.t1 AT1G75890 49.839 311 154 2 1 309 85 395 2.86e-117 343
MS.gene24118.t1 AT5G42170 50.000 314 153 2 1 313 59 369 5.88e-117 342
MS.gene24118.t1 AT3G14820 50.809 309 147 3 1 308 41 345 5.50e-114 333
MS.gene24118.t1 AT1G75890 47.840 324 154 3 1 309 56 379 1.14e-113 334
MS.gene24118.t1 AT1G59406 50.161 311 149 4 1 309 39 345 7.79e-110 323
MS.gene24118.t1 AT1G59030 50.161 311 149 4 1 309 39 345 7.79e-110 323
MS.gene24118.t1 AT1G58725 50.161 311 149 4 1 309 39 345 7.79e-110 323
MS.gene24118.t1 AT1G58520 47.588 311 150 5 1 309 39 338 3.21e-100 298
MS.gene24118.t1 AT1G58525 47.588 311 150 5 1 309 39 338 3.21e-100 298
MS.gene24118.t1 AT1G20132 45.687 313 169 1 1 312 70 382 5.11e-99 296
MS.gene24118.t1 AT1G20120 44.872 312 167 2 1 311 87 394 7.74e-99 297
MS.gene24118.t1 AT3G43570 46.129 310 134 4 1 309 39 316 5.95e-98 291
MS.gene24118.t1 AT2G04570 41.722 302 175 1 1 301 37 338 1.46e-86 264
MS.gene24118.t1 AT2G31540 43.421 304 167 4 1 300 44 346 4.78e-86 263
MS.gene24118.t1 AT5G03810 42.574 303 172 2 1 301 39 341 4.29e-85 260
MS.gene24118.t1 AT2G40250 40.764 314 177 3 1 307 45 356 2.40e-83 256
MS.gene24118.t1 AT3G43550 50.000 252 121 3 1 251 39 286 4.83e-83 253
MS.gene24118.t1 AT1G06990 38.730 315 190 2 1 313 46 359 6.58e-83 254
MS.gene24118.t1 AT2G30310 41.456 316 173 4 1 313 43 349 1.26e-82 254
MS.gene24118.t1 AT1G73610 41.722 302 162 4 1 301 44 332 1.27e-82 253
MS.gene24118.t1 AT2G30220 42.053 302 172 3 2 300 43 344 5.20e-81 249
MS.gene24118.t1 AT1G58430 42.857 301 167 4 1 297 44 343 3.40e-80 248
MS.gene24118.t1 AT5G63170 41.137 299 161 4 1 297 37 322 9.31e-80 246
MS.gene24118.t1 AT2G24560 41.333 300 173 3 1 297 43 342 1.08e-79 246
MS.gene24118.t1 AT1G20130 40.312 320 177 3 2 310 194 510 3.46e-79 250
MS.gene24118.t1 AT1G20130 40.312 320 177 3 2 310 214 530 8.98e-79 249
MS.gene24118.t1 AT5G03820 40.132 304 179 2 1 301 42 345 1.34e-77 241
MS.gene24118.t1 AT3G16370 39.934 303 180 2 1 301 39 341 5.15e-77 239
MS.gene24118.t1 AT5G03820 40.132 304 179 2 1 301 70 373 6.11e-77 240
MS.gene24118.t1 AT5G45960 38.742 302 180 2 1 297 56 357 1.89e-76 238
MS.gene24118.t1 AT5G22810 40.328 305 178 2 1 301 43 347 1.91e-76 238
MS.gene24118.t1 AT4G26790 37.540 309 191 2 1 308 38 345 2.43e-76 238
MS.gene24118.t1 AT4G26790 37.540 309 191 2 1 308 38 345 2.43e-76 238
MS.gene24118.t1 AT2G42990 38.538 301 184 1 1 300 37 337 3.48e-75 234
MS.gene24118.t1 AT1G23500 40.924 303 164 4 1 301 44 333 1.73e-73 230
MS.gene24118.t1 AT3G53100 37.742 310 192 1 1 309 38 347 9.55e-73 228
MS.gene24118.t1 AT1G20135 37.294 303 175 5 1 301 38 327 5.07e-70 221
MS.gene24118.t1 AT1G75920 40.924 303 168 3 1 301 38 331 1.13e-69 220
MS.gene24118.t1 AT1G75920 40.273 293 164 3 11 301 20 303 1.79e-66 211
MS.gene24118.t1 AT1G75920 39.117 317 167 4 1 300 33 340 1.05e-65 210
MS.gene24118.t1 AT1G75910 38.614 303 174 4 1 300 37 330 4.65e-62 201
MS.gene24118.t1 AT5G45950 34.824 313 199 4 1 313 49 356 6.13e-61 198
MS.gene24118.t1 AT3G50400 34.395 314 196 7 1 305 43 355 2.94e-58 192
MS.gene24118.t1 AT2G23540 33.548 310 196 6 1 301 57 365 3.89e-57 189
MS.gene24118.t1 AT2G24560 38.976 254 152 3 1 251 43 296 2.36e-55 182
MS.gene24118.t1 AT4G28780 32.013 303 203 3 1 301 40 341 3.92e-55 183
MS.gene24118.t1 AT1G33811 34.505 313 192 9 1 304 43 351 6.33e-55 183
MS.gene24118.t1 AT4G18970 34.185 313 195 7 1 307 37 344 2.16e-54 181
MS.gene24118.t1 AT5G33370 34.853 307 189 5 1 301 39 340 8.07e-54 180
MS.gene24118.t1 AT4G18970 34.185 313 195 7 1 307 37 344 1.06e-53 181
MS.gene24118.t1 AT1G29670 34.951 309 190 7 1 304 41 343 1.10e-53 179
MS.gene24118.t1 AT2G31550 40.000 205 121 2 98 300 1 205 1.45e-53 175
MS.gene24118.t1 AT5G45670 33.441 311 200 5 1 307 38 345 3.54e-53 178
MS.gene24118.t1 AT5G08460 34.516 310 193 6 1 303 58 364 3.68e-53 179
MS.gene24118.t1 AT1G29670 34.951 309 190 7 1 304 109 411 8.51e-53 179
MS.gene24118.t1 AT1G75920 35.314 303 154 4 1 301 38 300 7.57e-52 173
MS.gene24118.t1 AT5G37690 33.003 303 196 6 2 301 37 335 1.26e-51 174
MS.gene24118.t1 AT1G29660 33.117 308 198 5 1 304 41 344 1.56e-51 174
MS.gene24118.t1 AT4G10950 30.293 307 203 4 1 301 80 381 2.90e-51 174
MS.gene24118.t1 AT1G71691 35.738 305 185 8 1 301 64 361 4.01e-51 173
MS.gene24118.t1 AT5G18430 32.237 304 203 2 1 301 37 340 7.52e-50 169
MS.gene24118.t1 AT5G15720 35.238 315 191 9 1 307 39 348 9.06e-50 169
MS.gene24118.t1 AT1G71250 33.882 304 196 4 1 301 50 351 2.88e-49 168
MS.gene24118.t1 AT4G10950 30.293 307 199 5 1 301 80 377 1.70e-48 167
MS.gene24118.t1 AT3G04290 32.895 304 199 4 1 301 38 339 3.97e-48 165
MS.gene24118.t1 AT1G75930 34.868 304 183 6 1 300 38 330 4.89e-48 164
MS.gene24118.t1 AT5G41890 33.846 325 187 11 1 305 40 356 9.83e-48 164
MS.gene24118.t1 AT1G74460 29.582 311 212 6 2 308 33 340 2.88e-47 163
MS.gene24118.t1 AT2G19060 35.443 316 179 11 2 309 40 338 7.93e-47 161
MS.gene24118.t1 AT5G37690 32.013 303 191 7 2 301 37 327 1.97e-46 160
MS.gene24118.t1 AT2G19050 33.993 303 183 9 2 301 41 329 2.26e-46 160
MS.gene24118.t1 AT5G55050 33.438 317 193 9 1 305 48 358 9.56e-46 159
MS.gene24118.t1 AT2G19010 33.968 315 183 11 2 309 40 336 2.22e-45 157
MS.gene24118.t1 AT2G19010 33.968 315 183 11 2 309 70 366 5.40e-45 157
MS.gene24118.t1 AT1G53920 28.617 311 207 8 1 303 57 360 1.32e-41 148
MS.gene24118.t1 AT1G71120 31.148 305 194 8 2 300 41 335 3.79e-40 144
MS.gene24118.t1 AT5G33370 34.241 257 158 5 1 251 39 290 1.60e-38 139
MS.gene24118.t1 AT1G71691 32.955 264 167 7 42 301 3 260 2.90e-38 137
MS.gene24118.t1 AT2G03980 32.308 325 196 12 1 313 52 364 6.20e-38 138
MS.gene24118.t1 AT2G03980 32.308 325 196 12 1 313 52 364 6.20e-38 138
MS.gene24118.t1 AT2G03980 32.308 325 196 12 1 313 52 364 6.20e-38 138
MS.gene24118.t1 AT2G03980 32.308 325 196 12 1 313 52 364 6.20e-38 138
MS.gene24118.t1 AT5G15720 33.460 263 165 7 53 307 57 317 1.27e-36 134
MS.gene24118.t1 AT2G19050 34.583 240 144 7 2 238 41 270 8.68e-36 130
MS.gene24118.t1 AT4G30140 31.148 305 187 10 2 301 43 329 1.13e-35 132
MS.gene24118.t1 AT5G40990 28.481 316 203 9 2 303 47 353 7.01e-34 127
MS.gene24118.t1 AT4G16230 34.597 211 130 4 1 206 39 246 4.08e-33 122
MS.gene24118.t1 AT1G71691 33.725 255 158 8 1 251 64 311 2.56e-32 122
MS.gene24118.t1 AT5G15720 34.363 259 157 9 1 251 39 292 3.49e-32 122
MS.gene24118.t1 AT3G14225 26.730 318 212 8 1 303 46 357 1.48e-31 121
MS.gene24118.t1 AT3G14225 27.187 320 204 10 1 303 46 353 2.21e-31 121
MS.gene24118.t1 AT1G54790 25.246 305 195 8 18 296 56 353 4.04e-29 115
MS.gene24118.t1 AT2G04020 35.780 218 112 9 1 203 52 256 4.40e-29 112
MS.gene24118.t1 AT1G53940 27.044 318 205 10 2 303 49 355 6.93e-29 114
MS.gene24118.t1 AT3G05180 27.157 313 196 8 18 305 60 365 2.16e-28 113
MS.gene24118.t1 AT1G53990 26.730 318 199 11 2 303 45 344 7.15e-28 111
MS.gene24118.t1 AT2G04020 36.548 197 102 7 1 187 52 235 1.05e-27 110
MS.gene24118.t1 AT5G14450 29.524 315 186 10 19 305 65 371 9.42e-27 108
MS.gene24118.t1 AT2G27360 29.412 323 195 11 2 300 43 356 1.58e-25 105
MS.gene24118.t1 AT1G54790 24.742 291 187 7 32 296 68 352 1.87e-25 105
MS.gene24118.t1 AT3G48460 27.329 322 208 13 2 305 48 361 4.63e-24 101
MS.gene24118.t1 AT1G56670 25.965 285 191 9 30 301 75 352 2.68e-23 99.0
MS.gene24118.t1 AT3G27950 27.597 308 189 11 18 302 55 351 2.12e-22 96.7
MS.gene24118.t1 AT4G01130 25.418 299 183 8 29 296 67 356 4.28e-22 95.9
MS.gene24118.t1 AT5G03610 27.070 314 196 11 2 300 53 348 4.65e-22 95.5
MS.gene24118.t1 AT1G28610 28.571 329 190 12 2 301 41 353 5.16e-22 95.5
MS.gene24118.t1 AT3G26430 25.753 299 183 10 29 296 64 354 6.73e-22 95.1
MS.gene24118.t1 AT1G09390 27.645 293 188 11 30 306 72 356 9.20e-22 94.7
MS.gene24118.t1 AT1G67830 26.518 313 192 11 18 300 53 357 1.04e-20 91.7
MS.gene24118.t1 AT1G28650 28.793 323 192 14 2 298 47 357 1.85e-20 91.3
MS.gene24118.t1 AT1G54790 22.713 317 187 8 32 296 68 378 2.75e-20 90.9
MS.gene24118.t1 AT1G28580 27.385 325 200 12 2 301 47 360 3.91e-20 90.1
MS.gene24118.t1 AT1G54030 25.667 300 189 11 2 294 62 334 5.85e-20 90.1
MS.gene24118.t1 AT1G28640 27.410 332 199 17 2 305 45 362 7.07e-20 89.4
MS.gene24118.t1 AT1G28570 27.607 326 198 14 2 301 44 357 9.73e-20 89.0
MS.gene24118.t1 AT1G31550 27.217 327 197 15 2 301 46 358 1.16e-19 89.0
MS.gene24118.t1 AT1G28600 27.052 329 195 14 2 301 41 353 2.53e-19 87.8
MS.gene24118.t1 AT1G54020 26.000 300 192 11 11 303 53 329 5.34e-19 86.7
MS.gene24118.t1 AT1G28590 28.086 324 197 14 2 300 46 358 5.47e-19 87.0
MS.gene24118.t1 AT1G28670 28.308 325 198 14 2 301 45 359 7.33e-19 86.7
MS.gene24118.t1 AT3G62280 25.753 299 191 11 30 310 71 356 1.61e-18 85.5
MS.gene24118.t1 AT4G01130 25.000 272 169 7 56 296 3 270 3.06e-18 83.6
MS.gene24118.t1 AT1G54000 25.926 297 189 12 17 303 62 337 3.93e-18 84.3
MS.gene24118.t1 AT1G54010 25.733 307 193 13 8 300 49 334 4.88e-18 84.3
MS.gene24118.t1 AT1G53940 25.573 262 176 8 2 254 49 300 1.24e-17 82.0
MS.gene24118.t1 AT1G28660 26.059 307 200 11 14 301 60 358 1.57e-17 82.8
MS.gene24118.t1 AT3G09930 25.857 321 205 13 2 309 49 349 5.21e-17 80.9
MS.gene24118.t1 AT3G09930 25.857 321 205 13 2 309 49 349 5.21e-17 80.9
MS.gene24118.t1 AT1G31550 25.994 327 198 15 2 301 46 355 1.66e-16 79.7
MS.gene24118.t1 AT1G28660 26.384 307 198 12 14 301 60 357 1.68e-16 79.7
MS.gene24118.t1 AT4G16233 35.185 108 68 2 199 305 5 111 6.23e-16 73.6
MS.gene24118.t1 AT1G56670 24.786 234 153 8 30 251 75 297 1.10e-14 73.6
MS.gene24118.t1 AT4G01130 24.444 270 172 9 4 251 39 298 1.28e-14 73.9
MS.gene24118.t1 AT3G14220 25.347 288 180 10 19 294 60 324 3.11e-14 72.8
MS.gene24118.t1 AT3G62280 25.214 234 150 8 30 251 71 291 1.57e-12 67.4
MS.gene24118.t1 AT2G36325 24.281 313 210 12 2 305 57 351 6.17e-12 65.9
MS.gene24118.t1 AT3G14210 25.253 297 188 14 19 303 65 339 1.27e-11 65.1

Find 64 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATATCTTCCAGCATATT+TGG 0.150743 1.2:-428372 MS.gene24118:CDS
ACTTGGAAAATTCTGCTTAA+AGG 0.193594 1.2:+427062 None:intergenic
ATTCTTTGAATAATTCTATC+TGG 0.217150 1.2:+428023 None:intergenic
AAGTAGCAGGATTGTTTATA+TGG 0.252807 1.2:-427043 MS.gene24118:CDS
ACGACTCGGATTATGTGTTT+TGG 0.299162 1.2:-425869 MS.gene24118:CDS
TTACTATCAGTTGAAGAATT+AGG 0.313281 1.2:-428401 MS.gene24118:intron
ACCGGTGTTAACTTTGCTTC+CGG 0.332637 1.2:-428320 MS.gene24118:CDS
AATTCACTAGGCTGAAGATT+TGG 0.343354 1.2:+428347 None:intergenic
GGAGATTCAATCATGGATAC+TGG 0.365221 1.2:-428638 None:intergenic
TTACAACGATATCAAGTATA+GGG 0.370204 1.2:+427010 None:intergenic
CAGCCTAGTGAATTGGTTAC+CGG 0.373888 1.2:-428338 MS.gene24118:CDS
AAATGTATTTCTGTAGACTT+AGG 0.380055 1.2:+425802 None:intergenic
TATAAGCTGAGTCTACTAAA+AGG 0.388730 1.2:+427843 None:intergenic
CCTTGAAAATCTTTGCCATA+TGG 0.389112 1.2:+428572 None:intergenic
AAATCTTCAGCCTAGTGAAT+TGG 0.390537 1.2:-428345 MS.gene24118:CDS
CGCCTGTGCCACAGCACCCT+CGG 0.404574 1.2:+425940 None:intergenic
AACTTTGCTTCCGGTGGTGC+AGG 0.405817 1.2:-428311 MS.gene24118:CDS
TAGCACAAAATAAATACTAT+TGG 0.418137 1.2:+427946 None:intergenic
TTTACAACGATATCAAGTAT+AGG 0.431490 1.2:+427009 None:intergenic
GTATTCAATGTACCACCAAT+TGG 0.435799 1.2:-427195 MS.gene24118:CDS
ATATAAACAATCCTGCTACT+TGG 0.437775 1.2:+427045 None:intergenic
AAGGTTCCAGCAGATCTTAT+AGG 0.461354 1.2:-428518 MS.gene24118:intron
TTTCAAGGAGGAATTCCAAC+TGG 0.466996 1.2:-428557 MS.gene24118:CDS
GACCGAGGGTGCTGTGGCAC+AGG 0.468131 1.2:-425942 MS.gene24118:CDS
TTCTTTGAATAATTCTATCT+GGG 0.473576 1.2:+428024 None:intergenic
ATCCGAGTCGTTGGCACAAG+TGG 0.479341 1.2:+425881 None:intergenic
AATGTATTTCTGTAGACTTA+GGG 0.480144 1.2:+425803 None:intergenic
TGAAACGGTACGCACCCAAT+TGG 0.481254 1.2:+427180 None:intergenic
CAGTGCAAATTCCCTCCATA+TGG 0.481728 1.2:-428587 MS.gene24118:CDS
ATACTGGAAATAACAACAAC+AGG 0.490434 1.2:-428622 MS.gene24118:CDS
ATAGTACCTATAAGATCTGC+TGG 0.491106 1.2:+428512 None:intergenic
TATTCAATGTACCACCAATT+GGG 0.499652 1.2:-427194 MS.gene24118:CDS
CAACTAGGTGCAAGGAGGAT+AGG 0.513503 1.2:-427219 MS.gene24118:CDS
CCAGCCACTGTTCTCTGAAA+CGG 0.517712 1.2:+427165 None:intergenic
CTCAGCTTATAATTTCTACA+AGG 0.522865 1.2:-427831 MS.gene24118:intron
TGGCACAAGTGGGTTCCAAA+TGG 0.524285 1.2:+425892 None:intergenic
AACGGTACGCACCCAATTGG+TGG 0.534120 1.2:+427183 None:intergenic
CCATTGCTAAATCTTCCAGT+TGG 0.534561 1.2:+428542 None:intergenic
AATTTGCACTGAGTTGGTGT+TGG 0.536542 1.2:+428599 None:intergenic
TGAAAATCTTTGCCATATGG+AGG 0.540087 1.2:+428575 None:intergenic
AGATTTGGATCCAAATATGC+TGG 0.543536 1.2:+428362 None:intergenic
ACCCACTTGTGCCAACGACT+CGG 0.554324 1.2:-425883 MS.gene24118:CDS
GAATATATTGTGAAGCTGAA+AGG 0.555476 1.2:-428004 MS.gene24118:CDS
AGGATCATATCCTGCACCAC+CGG 0.561279 1.2:+428301 None:intergenic
TGGAAGATTTAGCAATGGAA+AGG 0.566706 1.2:-428537 MS.gene24118:CDS
ACTAAAAGGTCAGAGTATGA+AGG 0.568719 1.2:+427857 None:intergenic
GAAAATCTTTGCCATATGGA+GGG 0.573041 1.2:+428576 None:intergenic
CCGTTTCAGAGAACAGTGGC+TGG 0.574955 1.2:-427165 MS.gene24118:CDS
GGAGGGAATTTGCACTGAGT+TGG 0.578300 1.2:+428593 None:intergenic
GTTGTAGACCGAGGGTGCTG+TGG 0.590207 1.2:-425948 MS.gene24118:CDS
GTGAAGCTGAAAGGACTAGT+TGG 0.592305 1.2:-427995 MS.gene24118:CDS
AAATGTATCAACTAGGTGCA+AGG 0.593045 1.2:-427227 MS.gene24118:CDS
AAACACATAATCCGAGTCGT+TGG 0.610398 1.2:+425872 None:intergenic
GGTGTTAACTTTGCTTCCGG+TGG 0.610616 1.2:-428317 MS.gene24118:CDS
TGAAAGGAAATGTATCAACT+AGG 0.611457 1.2:-427234 MS.gene24118:intron
TCCGAGTCGTTGGCACAAGT+GGG 0.615115 1.2:+425882 None:intergenic
GGCTTCAAAGTTGTAGACCG+AGG 0.619507 1.2:-425957 MS.gene24118:CDS
CCAACTGGAAGATTTAGCAA+TGG 0.628801 1.2:-428542 MS.gene24118:CDS
GCTTCAAAGTTGTAGACCGA+GGG 0.636914 1.2:-425956 MS.gene24118:CDS
ACACCGGTAACCAATTCACT+AGG 0.656294 1.2:+428335 None:intergenic
TTTCAGAGAACAGTGGCTGG+AGG 0.665786 1.2:-427162 MS.gene24118:CDS
ACCGGAAGCAAAGTTAACAC+CGG 0.679800 1.2:+428319 None:intergenic
TGTATCAACTAGGTGCAAGG+AGG 0.714837 1.2:-427224 MS.gene24118:CDS
CGTACCGTTTCAGAGAACAG+TGG 0.763484 1.2:-427169 MS.gene24118:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAACATAGTAAAAATT+TGG + chr1.2:427722-427741 None:intergenic 10.0%
!!! TAAAAGAAATTTTTGATAAA+TGG + chr1.2:428344-428363 None:intergenic 10.0%
!! ATGATTCAAGATTTAATATT+TGG - chr1.2:428409-428428 MS.gene24118:intron 15.0%
!! GTACTTTATATTTATGTTAA+AGG - chr1.2:427837-427856 MS.gene24118:CDS 15.0%
!! TGAAATCAAAAATATTTACA+AGG + chr1.2:426637-426656 None:intergenic 15.0%
!! TTTATATTTATGTTAAAGGT+TGG - chr1.2:427841-427860 MS.gene24118:CDS 15.0%
!!! AATTGAGTTTCTTTTATTAT+TGG - chr1.2:428095-428114 MS.gene24118:intron 15.0%
!!! ATTTAGAATTACCATATTTT+TGG + chr1.2:427434-427453 None:intergenic 15.0%
!!! ATTTTATTACTATCATCAAT+TGG + chr1.2:426202-426221 None:intergenic 15.0%
!!! CTTTTCATAGTATTTTATAT+TGG - chr1.2:428316-428335 MS.gene24118:CDS 15.0%
!!! TAACAAAACATATGTATTTT+TGG - chr1.2:427766-427785 MS.gene24118:intron 15.0%
!! AAAAATTATTGTCAACTTGT+AGG - chr1.2:428436-428455 MS.gene24118:intron 20.0%
!! AAAATAAGTGTTAGAGAATA+TGG - chr1.2:428285-428304 MS.gene24118:CDS 20.0%
!! ATTCTTTGAATAATTCTATC+TGG + chr1.2:426394-426413 None:intergenic 20.0%
!! GTTTATCACATTTAAAAATG+TGG + chr1.2:427648-427667 None:intergenic 20.0%
!! TAATTCACTAGTAATACTTA+AGG - chr1.2:428059-428078 MS.gene24118:intron 20.0%
!! TAGCACAAAATAAATACTAT+TGG + chr1.2:426471-426490 None:intergenic 20.0%
!! TGGATAATTAATTCAATTCA+CGG - chr1.2:427530-427549 MS.gene24118:intron 20.0%
!! TTAATAAAGTGTAGAAAAAG+TGG + chr1.2:427478-427497 None:intergenic 20.0%
!! TTCTTTGAATAATTCTATCT+GGG + chr1.2:426393-426412 None:intergenic 20.0%
!!! AGATACATGTACTTTTTATT+TGG + chr1.2:427793-427812 None:intergenic 20.0%
!!! ATTTGCAACATAATTTTTTC+AGG + chr1.2:427912-427931 None:intergenic 20.0%
!!! CTTAATTCACTTTTTTTTTG+TGG - chr1.2:427959-427978 MS.gene24118:CDS 20.0%
!!! TATTTTTTTATGCAACCATT+TGG - chr1.2:428507-428526 MS.gene24118:intron 20.0%
!!! TTTTAATAACAATTACTCTC+CGG - chr1.2:427735-427754 MS.gene24118:intron 20.0%
! AATCTCATGTATGTAAAAGT+TGG + chr1.2:428241-428260 None:intergenic 25.0%
! ACATAAATCAAAAGTCATGA+CGG + chr1.2:426711-426730 None:intergenic 25.0%
! CTAGAAAGAAAGAAACAAAA+AGG - chr1.2:426283-426302 MS.gene24118:intron 25.0%
! GTTGTAAACTACCAAAAATA+TGG - chr1.2:427420-427439 MS.gene24118:intron 25.0%
! TAAAAAATTTCAGCAAGCTT+TGG - chr1.2:426670-426689 MS.gene24118:intron 25.0%
! TCCTTCTATATACAAATGAA+AGG - chr1.2:427164-427183 MS.gene24118:CDS 25.0%
! TCCTTTCATTTGTATATAGA+AGG + chr1.2:427168-427187 None:intergenic 25.0%
! TGCGAAGTATAAAATCTTAA+CGG - chr1.2:427081-427100 MS.gene24118:CDS 25.0%
! TGTTTCCTTATATAATAAGC+AGG - chr1.2:426349-426368 MS.gene24118:intron 25.0%
! TTACAACGATATCAAGTATA+GGG + chr1.2:427407-427426 None:intergenic 25.0%
! TTACTATCAGTTGAAGAATT+AGG - chr1.2:426013-426032 MS.gene24118:intron 25.0%
! TTTACAACGATATCAAGTAT+AGG + chr1.2:427408-427427 None:intergenic 25.0%
!! AAATGTATTTCTGTAGACTT+AGG + chr1.2:428615-428634 None:intergenic 25.0%
!! AATGTATTTCTGTAGACTTA+GGG + chr1.2:428614-428633 None:intergenic 25.0%
!! CACTCTAACATTTGTTAATT+AGG - chr1.2:427878-427897 MS.gene24118:CDS 25.0%
!! CTCTTTTACTCATTTCAATT+AGG + chr1.2:426263-426282 None:intergenic 25.0%
!! TCACTTAATTTGAGAAACTT+AGG - chr1.2:428260-428279 MS.gene24118:intron 25.0%
!! TCATGACGGAAAATAATTAA+CGG + chr1.2:426697-426716 None:intergenic 25.0%
!!! AATTCACTTTTTTTTTGTGG+TGG - chr1.2:427962-427981 MS.gene24118:CDS 25.0%
!!! ACATATGTTTTGTTACTTGT+AGG + chr1.2:427761-427780 None:intergenic 25.0%
!!! AGTATTTATTTTGTGCTAGT+AGG - chr1.2:426473-426492 MS.gene24118:intron 25.0%
!!! TTTTGTTATGTGTAACAGAA+TGG + chr1.2:425929-425948 None:intergenic 25.0%
AAAACATGTACTTATCCCTT+AGG - chr1.2:428162-428181 MS.gene24118:intron 30.0%
AAGTAGCAGGATTGTTTATA+TGG - chr1.2:427371-427390 MS.gene24118:intron 30.0%
AATTGTAGTTAACCACAGTT+TGG + chr1.2:427584-427603 None:intergenic 30.0%
ACTTGGAAAATTCTGCTTAA+AGG + chr1.2:427355-427374 None:intergenic 30.0%
AGAATATCTTCCAGCATATT+TGG - chr1.2:426042-426061 MS.gene24118:intron 30.0%
ATACTGGAAATAACAACAAC+AGG - chr1.2:425792-425811 MS.gene24118:CDS 30.0%
ATATAAACAATCCTGCTACT+TGG + chr1.2:427372-427391 None:intergenic 30.0%
ATATGGTTAATTCATCTCAG+TGG - chr1.2:427510-427529 MS.gene24118:intron 30.0%
CTCAGCTTATAATTTCTACA+AGG - chr1.2:426583-426602 MS.gene24118:intron 30.0%
GAATATATTGTGAAGCTGAA+AGG - chr1.2:426410-426429 MS.gene24118:intron 30.0%
GGATAAATGAAAATCACATG+CGG - chr1.2:428116-428135 MS.gene24118:intron 30.0%
TATAAGCTGAGTCTACTAAA+AGG + chr1.2:426574-426593 None:intergenic 30.0%
TATTCAATGTACCACCAATT+GGG - chr1.2:427220-427239 MS.gene24118:CDS 30.0%
TCATGCTAATGTACAAAAAG+TGG - chr1.2:427674-427693 MS.gene24118:intron 30.0%
TCCTTTGACATCAAAAATAG+AGG - chr1.2:426132-426151 MS.gene24118:intron 30.0%
TGAAAGGAAATGTATCAACT+AGG - chr1.2:427180-427199 MS.gene24118:CDS 30.0%
TGCATAAAATATGCAAAGTC+CGG + chr1.2:428002-428021 None:intergenic 30.0%
! CATGACGGAAAATAATTAAC+GGG + chr1.2:426696-426715 None:intergenic 30.0%
! GGCAACAAGTATTTTGTAAA+CGG + chr1.2:428593-428612 None:intergenic 30.0%
!! TTAATTGATAGTGAGAGTTC+AGG + chr1.2:428159-428140 None:intergenic 30.0%
!! TTAGAGATTGATTTGATCGA+TGG + chr1.2:426179-426198 None:intergenic 30.0%
!!! ACCTCTATTTTTGATGTCAA+AGG + chr1.2:426136-426155 None:intergenic 30.0%
!!! AGCTTGCTGAAATTTTTTAG+AGG + chr1.2:426669-426688 None:intergenic 30.0%
!!! GGTAGTTTTATTATTCCACA+CGG - chr1.2:426604-426623 MS.gene24118:intron 30.0%
!!! GTAGTTTTATTATTCCACAC+GGG - chr1.2:426605-426624 MS.gene24118:intron 30.0%
AAAGCATGGGAGAAAACATT+TGG - chr1.2:427013-427032 MS.gene24118:CDS 35.0%
AAATCTTCAGCCTAGTGAAT+TGG - chr1.2:426069-426088 MS.gene24118:intron 35.0%
AAATGTATCAACTAGGTGCA+AGG - chr1.2:427187-427206 MS.gene24118:CDS 35.0%
AATTCACTAGGCTGAAGATT+TGG + chr1.2:426070-426089 None:intergenic 35.0%
ACTAAAAGGTCAGAGTATGA+AGG + chr1.2:426560-426579 None:intergenic 35.0%
AGAGTTCAGGAATAAACCTA+AGG + chr1.2:428181-428200 None:intergenic 35.0%
AGATTTGGATCCAAATATGC+TGG + chr1.2:426055-426074 None:intergenic 35.0%
AGCTGCCTGCTTATTATATA+AGG + chr1.2:426357-426376 None:intergenic 35.0%
ATAGTACCTATAAGATCTGC+TGG + chr1.2:425905-425924 None:intergenic 35.0%
CACTATCAATTAAGAAGCTC+CGG - chr1.2:428201-428220 MS.gene24118:intron 35.0%
CATAAAATATGCAAAGTCCG+GGG + chr1.2:428000-428019 None:intergenic 35.0%
CCTTGAAAATCTTTGCCATA+TGG + chr1.2:425845-425864 None:intergenic 35.0%
GAAAATCTTTGCCATATGGA+GGG + chr1.2:425841-425860 None:intergenic 35.0%
GAGTTCAGGAATAAACCTAA+GGG + chr1.2:428180-428199 None:intergenic 35.0%
GCATAAAATATGCAAAGTCC+GGG + chr1.2:428001-428020 None:intergenic 35.0%
GTATTCAATGTACCACCAAT+TGG - chr1.2:427219-427238 MS.gene24118:CDS 35.0%
TCAATTCACGGTGAAAATTG+TGG - chr1.2:427542-427561 MS.gene24118:intron 35.0%
TCATCTACAAAACCAAACTG+TGG - chr1.2:427569-427588 MS.gene24118:intron 35.0%
TGAAAATCTTTGCCATATGG+AGG + chr1.2:425842-425861 None:intergenic 35.0%
TGGAAGATTTAGCAATGGAA+AGG - chr1.2:425877-425896 MS.gene24118:CDS 35.0%
TGTAAAAGTTGGAATGAACC+CGG + chr1.2:428230-428249 None:intergenic 35.0%
! ACTTGCTGAAAACTCATAGA+GGG - chr1.2:427043-427062 MS.gene24118:CDS 35.0%
! ATGAGTGCACTTAAAAGCAT+GGG - chr1.2:427000-427019 MS.gene24118:CDS 35.0%
! ATTTTGTAAACGGCTTCAGT+AGG + chr1.2:428583-428602 None:intergenic 35.0%
! CCATATGGCAAAGATTTTCA+AGG - chr1.2:425842-425861 MS.gene24118:CDS 35.0%
!! AACTTGCTGAAAACTCATAG+AGG - chr1.2:427042-427061 MS.gene24118:CDS 35.0%
!! ATGTTTTGTTACTTGTAGGC+CGG + chr1.2:427757-427776 None:intergenic 35.0%
!! TATGGCAAAGATTTTCAAGG+AGG - chr1.2:425845-425864 MS.gene24118:CDS 35.0%
!!! ACTTTTTTTTTGTGGTGGTC+GGG - chr1.2:427967-427986 MS.gene24118:CDS 35.0%
!!! CACTTTTTTTTTGTGGTGGT+CGG - chr1.2:427966-427985 MS.gene24118:CDS 35.0%
AAACACATAATCCGAGTCGT+TGG + chr1.2:428545-428564 None:intergenic 40.0%
AAGGTTCCAGCAGATCTTAT+AGG - chr1.2:425896-425915 MS.gene24118:CDS 40.0%
CATGAGTGCACTTAAAAGCA+TGG - chr1.2:426999-427018 MS.gene24118:CDS 40.0%
CCAACTGGAAGATTTAGCAA+TGG - chr1.2:425872-425891 MS.gene24118:CDS 40.0%
CCATTGCTAAATCTTCCAGT+TGG + chr1.2:425875-425894 None:intergenic 40.0%
TTTCAAGGAGGAATTCCAAC+TGG - chr1.2:425857-425876 MS.gene24118:CDS 40.0%
! AGCAGAATTTTCCAAGTAGC+AGG - chr1.2:427358-427377 MS.gene24118:intron 40.0%
!! AATTTGCACTGAGTTGGTGT+TGG + chr1.2:425818-425837 None:intergenic 40.0%
!! ACGACTCGGATTATGTGTTT+TGG - chr1.2:428545-428564 MS.gene24118:CDS 40.0%
!! CGACTCGGATTATGTGTTTT+GGG - chr1.2:428546-428565 MS.gene24118:CDS 40.0%
!!! CTTTTTTTTTGTGGTGGTCG+GGG - chr1.2:427968-427987 MS.gene24118:CDS 40.0%
AATTAAGAAGCTCCGGTTGC+CGG - chr1.2:428208-428227 MS.gene24118:intron 45.0%
ACACCGGTAACCAATTCACT+AGG + chr1.2:426082-426101 None:intergenic 45.0%
ACCGGAAGCAAAGTTAACAC+CGG + chr1.2:426098-426117 None:intergenic 45.0%
CAGCCTAGTGAATTGGTTAC+CGG - chr1.2:426076-426095 MS.gene24118:intron 45.0%
CAGTGCAAATTCCCTCCATA+TGG - chr1.2:425827-425846 MS.gene24118:CDS 45.0%
GCTTCAAAGTTGTAGACCGA+GGG - chr1.2:428458-428477 MS.gene24118:intron 45.0%
TGTATCAACTAGGTGCAAGG+AGG - chr1.2:427190-427209 MS.gene24118:CDS 45.0%
TTACAAGGATCAAACCCGTG+TGG + chr1.2:426622-426641 None:intergenic 45.0%
! ACCGGTGTTAACTTTGCTTC+CGG - chr1.2:426094-426113 MS.gene24118:intron 45.0%
! GTGAAGCTGAAAGGACTAGT+TGG - chr1.2:426419-426438 MS.gene24118:intron 45.0%
!!! ATTAATCATTTTAAAAAATA+TGG - chr1.2:427493-427512 MS.gene24118:intron 5.0%
AGGATCATATCCTGCACCAC+CGG + chr1.2:426116-426135 None:intergenic 50.0%
ATTAAGAAGCTCCGGTTGCC+GGG - chr1.2:428209-428228 MS.gene24118:intron 50.0%
CAACTAGGTGCAAGGAGGAT+AGG - chr1.2:427195-427214 MS.gene24118:CDS 50.0%
CGTACCGTTTCAGAGAACAG+TGG - chr1.2:427245-427264 MS.gene24118:intron 50.0%
GGAGGGAATTTGCACTGAGT+TGG + chr1.2:425824-425843 None:intergenic 50.0%
GGCTTCAAAGTTGTAGACCG+AGG - chr1.2:428457-428476 MS.gene24118:intron 50.0%
GGTGTTAACTTTGCTTCCGG+TGG - chr1.2:426097-426116 MS.gene24118:intron 50.0%
TGAAACGGTACGCACCCAAT+TGG + chr1.2:427237-427256 None:intergenic 50.0%
TTTCAGAGAACAGTGGCTGG+AGG - chr1.2:427252-427271 MS.gene24118:intron 50.0%
! CCAGCCACTGTTCTCTGAAA+CGG + chr1.2:427252-427271 None:intergenic 50.0%
! TGAGCATAGCTCGGTTGGTA+AGG + chr1.2:428029-428048 None:intergenic 50.0%
! TGGCACAAGTGGGTTCCAAA+TGG + chr1.2:428525-428544 None:intergenic 50.0%
AACGGTACGCACCCAATTGG+TGG + chr1.2:427234-427253 None:intergenic 55.0%
AACTTTGCTTCCGGTGGTGC+AGG - chr1.2:426103-426122 MS.gene24118:intron 55.0%
ACCCACTTGTGCCAACGACT+CGG - chr1.2:428531-428550 MS.gene24118:CDS 55.0%
ATCCGAGTCGTTGGCACAAG+TGG + chr1.2:428536-428555 None:intergenic 55.0%
CCGTTTCAGAGAACAGTGGC+TGG - chr1.2:427249-427268 MS.gene24118:intron 55.0%
GTGTCCTCGTGAGCATAGCT+CGG + chr1.2:428038-428057 None:intergenic 55.0%
GTTGGAATGAACCCGGCAAC+CGG + chr1.2:428223-428242 None:intergenic 55.0%
TCCGAGTCGTTGGCACAAGT+GGG + chr1.2:428535-428554 None:intergenic 55.0%
CCAACCGAGCTATGCTCACG+AGG - chr1.2:428031-428050 MS.gene24118:CDS 60.0%
CCTCGTGAGCATAGCTCGGT+TGG + chr1.2:428034-428053 None:intergenic 60.0%
!! GTTGTAGACCGAGGGTGCTG+TGG - chr1.2:428466-428485 MS.gene24118:intron 60.0%
GGTGGTCGGGGTTTGAACCC+CGG - chr1.2:427980-427999 MS.gene24118:CDS 65.0%
CGCCTGTGCCACAGCACCCT+CGG + chr1.2:428477-428496 None:intergenic 70.0%
!! GACCGAGGGTGCTGTGGCAC+AGG - chr1.2:428472-428491 MS.gene24118:intron 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 425788 428648 425788 ID=MS.gene24118
chr1.2 mRNA 425788 428648 425788 ID=MS.gene24118.t1;Parent=MS.gene24118
chr1.2 exon 428519 428648 428519 ID=MS.gene24118.t1.exon1;Parent=MS.gene24118.t1
chr1.2 CDS 428519 428648 428519 ID=cds.MS.gene24118.t1;Parent=MS.gene24118.t1
chr1.2 exon 428283 428413 428283 ID=MS.gene24118.t1.exon2;Parent=MS.gene24118.t1
chr1.2 CDS 428283 428413 428283 ID=cds.MS.gene24118.t1;Parent=MS.gene24118.t1
chr1.2 exon 427832 428065 427832 ID=MS.gene24118.t1.exon3;Parent=MS.gene24118.t1
chr1.2 CDS 427832 428065 427832 ID=cds.MS.gene24118.t1;Parent=MS.gene24118.t1
chr1.2 exon 426995 427250 426995 ID=MS.gene24118.t1.exon4;Parent=MS.gene24118.t1
chr1.2 CDS 426995 427250 426995 ID=cds.MS.gene24118.t1;Parent=MS.gene24118.t1
chr1.2 exon 425788 425978 425788 ID=MS.gene24118.t1.exon5;Parent=MS.gene24118.t1
chr1.2 CDS 425788 425978 425788 ID=cds.MS.gene24118.t1;Parent=MS.gene24118.t1
Gene Sequence

>MS.gene24118

ATGGATACTGGAAATAACAACAACAGGCCAACACCAACTCAGTGCAAATTCCCTCCATATGGCAAAGATTTTCAAGGAGGAATTCCAACTGGAAGATTTAGCAATGGAAAGGTTCCAGCAGATCTTATAGGTACTATTCCATTCTGTTACACATAACAAAATATAAGTAAAAATGTGCATGTGTTTAGTCTAATATATATAAATGTTTGTTTTTCATTTTAAATTTTACTATCAGTTGAAGAATTAGGCATTAAAGAATATCTTCCAGCATATTTGGATCCAAATCTTCAGCCTAGTGAATTGGTTACCGGTGTTAACTTTGCTTCCGGTGGTGCAGGATATGATCCTTTGACATCAAAAATAGAGGTATCTATTTTTTCAGAATAAACCATCGATCAAATCAATCTCTAACCAATTGATGATAGTAATAAAATTTATATATTATTTGTAATATTTTTTTATAGTTCTCGAACCTAATTGAAATGAGTAAAAGAGCTAGAAAGAAAGAAACAAAAAGGAGTTTGATTTTCTTTTTTTTCTTGTATGATTCTTTACTAACTCTGTTTCCTTATATAATAAGCAGGCAGCTATATCTATGTCTGCCCAGATAGAATTATTCAAAGAATATATTGTGAAGCTGAAAGGACTAGTTGGTGAAGATAGAGCAAACTTCATCTTAGCCAATAGTATTTATTTTGTGCTAGTAGGAAGCAATGATATTTCTAACACATACTTCTTGTTTCATGTGAGACAAGTTAATTATGATTTTCCTTCATACTCTGACCTTTTAGTAGACTCAGCTTATAATTTCTACAAGGTAGTTTTATTATTCCACACGGGTTTGATCCTTGTAAATATTTTTGATTTCATTTAAAATTCCTCTAAAAAATTTCAGCAAGCTTTGGCCCGTTAATTATTTTCCGTCATGACTTTTGATTTATGTTTTTAAGTCAACTCATGTGTATATTTAACGTTTTTAAATGAAAATTTATAGAGATGTTTAGAATATTATAACAAGCTCTCTCACAAATAAAATTTTTCACAAAAATATGAATTAAATATAAATTTTTAAGTGCTAAAAACTAAAAAATTCATATTCAACTCATCTCACATGTTAAAAATATTTAAACTTTTGCAAGATAGATTTTTATAATATACTAAACATAGATACAAAAAATAATTCAAAATTTTGAAAAAAAAAAAAAAAAACACATGAGTGCACTTAAAAGCATGGGAGAAAACATTTGGAATTAAAACTTGCTGAAAACTCATAGAGGGATTAAAAGTAAAATTTGCGAAGTATAAAATCTTAACGGTTATTTATATATTACTTTAGAAAAGCTATTTTTTTGTCATAATTACTTATTTATTGTTTTTCCTTCTATATACAAATGAAAGGAAATGTATCAACTAGGTGCAAGGAGGATAGGAGTATTCAATGTACCACCAATTGGGTGCGTACCGTTTCAGAGAACAGTGGCTGGAGGAATAACAAGAAAATGTGTGCAACATTACAATGATGCAGTTGTTTTCTTTAACAAAAAGTTGTCAATGAAAATTCATTCCTTTAAGCAGAATTTTCCAAGTAGCAGGATTGTTTATATGGATGTTTACAACCCTATACTTGATATCGTTGTAAACTACCAAAAATATGGTAATTCTAAATTCATAAATATTTAATGTACATCCACTTTTTCTACACTTTATTAATCATTTTAAAAAATATGGTTAATTCATCTCAGTGGATAATTAATTCAATTCACGGTGAAAATTGTGGTTAATCATCTACAAAACCAAACTGTGGTTAACTACAATTTTTAACATGAACTAAATTAACTATTTACTAAACTGAAACAACCACATTTTTAAATGTGATAAACTAAATGTCATGCTAATGTACAAAAAGTGGATGTCTATATATCATTACTTAACCAAATTTTTACTATGTTTTAATAACAATTACTCTCCGGCCTACAAGTAACAAAACATATGTATTTTTGGTCCAAATAAAAAGTACATGTATCTGAGCTAAATATAAATCGAATACACGTACTTTATATTTATGTTAAAGGTTGGAGTAGTGCTATTTACACTCTAACATTTGTTAATTAGGAGATCAATCCTGAAAAAATTATGTTGCAAATCAAAGCTTTAGAAATTTAGAAATATTACTTAATTCACTTTTTTTTTGTGGTGGTCGGGGTTTGAACCCCGGACTTTGCATATTTTATGCATTGTCCTTACCAACCGAGCTATGCTCACGAGGACACTTAATTCACTAGTAATACTTAAGGAGCAGTAGAAATTAATTGAGTTTCTTTTATTATTGGATAAATGAAAATCACATGCGGCTTAATTGATAGTGAGAGTTCAGAAAACATGTACTTATCCCTTAGGTTTATTCCTGAACTCTCACTATCAATTAAGAAGCTCCGGTTGCCGGGTTCATTCCAACTTTTACATACATGAGATTCACTTAATTTGAGAAACTTAGGTTAAAATAAGTGTTAGAGAATATGGTACTATCACTTTTCATAGTATTTTATATTGGTTCCATTTATCAAAAATTTCTTTTAAAGCTTTTGTAAAATTTAGAAAAAATTCTTCAATGCTTTTCTCAAATGATTCAAGATTTAATATTTGGACTAAAAAATTATTGTCAACTTGTAGGCTTCAAAGTTGTAGACCGAGGGTGCTGTGGCACAGGCGAAATCGAAGTTATTTTTTTATGCAACCATTTGGAACCCACTTGTGCCAACGACTCGGATTATGTGTTTTGGGATGCTTTTCATCCTACTGAAGCCGTTTACAAAATACTTGTTGCCCTAAGTCTACAGAAATACATTTACAACTTTATTTAG
Protein sequence

>MS.gene24118.t1

MDTGNNNNRPTPTQCKFPPYGKDFQGGIPTGRFSNGKVPADLIVEELGIKEYLPAYLDPNLQPSELVTGVNFASGGAGYDPLTSKIEAAISMSAQIELFKEYIVKLKGLVGEDRANFILANSIYFVLVGSNDISNTYFLFHVRQVNYDFPSYSDLLVDSAYNFYKEMYQLGARRIGVFNVPPIGCVPFQRTVAGGITRKCVQHYNDAVVFFNKKLSMKIHSFKQNFPSSRIVYMDVYNPILDIVVNYQKYGFKVVDRGCCGTGEIEVIFLCNHLEPTCANDSDYVFWDAFHPTEAVYKILVALSLQKYIYNFI