AlfalfaGEDB | MS.gene28996

M. sativa cultivar XinJiangDaYe / MS.gene28996

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0008150 GO:0008152 GO:0016491 GO:0016705 GO:0020037 GO:0043167 GO:0043169 GO:0046872 GO:0046906 GO:0046914 GO:0048037 GO:0055114 GO:0097159 GO:1901363
PFAM: PF00067.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28996.t1	XP_003601148.2	96.1	259	10	0	1	259	59	317	8.30E-136	493

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28996.t1	P24465	48.6	253	122	3	14	259	63	314	1.2e-61	238.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28996.t1	G7J474	96.1	259	10	0	1	259	59	317	6.0e-136	493.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene28996	0.824812	6.59E-54	-1.69E-46
MS.gene050507	MS.gene28996	0.810826	9.50E-51	-1.69E-46
MS.gene050670	MS.gene28996	0.812137	4.93E-51	-1.69E-46
MS.gene050812	MS.gene28996	0.851217	1.02E-60	-1.69E-46
MS.gene05081	MS.gene28996	0.836009	1.20E-56	-1.69E-46
MS.gene05105	MS.gene28996	0.819887	9.17E-53	-1.69E-46
MS.gene051525	MS.gene28996	0.805994	1.02E-49	-1.69E-46
MS.gene051666	MS.gene28996	0.811157	8.05E-51	-1.69E-46
MS.gene051838	MS.gene28996	0.829476	5.04E-55	-1.69E-46
MS.gene052188	MS.gene28996	0.819821	9.50E-53	-1.69E-46
MS.gene052310	MS.gene28996	0.81409	1.84E-51	-1.69E-46
MS.gene052322	MS.gene28996	0.818547	1.85E-52	-1.69E-46
MS.gene052414	MS.gene28996	0.836237	1.05E-56	-1.69E-46
MS.gene052421	MS.gene28996	0.81403	1.90E-51	-1.69E-46
MS.gene052469	MS.gene28996	0.80602	1.01E-49	-1.69E-46
MS.gene052501	MS.gene28996	0.809995	1.44E-50	-1.69E-46
MS.gene052505	MS.gene28996	0.80288	4.55E-49	-1.69E-46
MS.gene052982	MS.gene28996	0.800596	1.34E-48	-1.69E-46
MS.gene053824	MS.gene28996	0.80724	5.57E-50	-1.69E-46
MS.gene055539	MS.gene28996	0.864788	9.45E-65	-1.69E-46
MS.gene055741	MS.gene28996	0.8215	3.91E-53	-1.69E-46
MS.gene055744	MS.gene28996	0.822542	2.24E-53	-1.69E-46
MS.gene057124	MS.gene28996	0.836276	1.03E-56	-1.69E-46
MS.gene057196	MS.gene28996	0.800002	1.77E-48	-1.69E-46
MS.gene057332	MS.gene28996	0.802303	5.98E-49	-1.69E-46
MS.gene057658	MS.gene28996	0.810738	9.93E-51	-1.69E-46
MS.gene057823	MS.gene28996	0.810934	9.01E-51	-1.69E-46
MS.gene058365	MS.gene28996	0.805153	1.53E-49	-1.69E-46
MS.gene058376	MS.gene28996	0.831127	1.99E-55	-1.69E-46
MS.gene058444	MS.gene28996	0.838879	2.21E-57	-1.69E-46
MS.gene058700	MS.gene28996	0.802958	4.38E-49	-1.69E-46
MS.gene058838	MS.gene28996	0.813258	2.80E-51	-1.69E-46
MS.gene059023	MS.gene28996	0.808261	3.38E-50	-1.69E-46
MS.gene059695	MS.gene28996	0.810574	1.08E-50	-1.69E-46
MS.gene060407	MS.gene28996	0.820455	6.80E-53	-1.69E-46
MS.gene061154	MS.gene28996	0.818025	2.43E-52	-1.69E-46
MS.gene061231	MS.gene28996	0.824368	8.38E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28996.t1	MTR_3g076530	96.139	259	10	0	1	259	59	317	0.0	518
MS.gene28996.t1	MTR_4g133750	46.484	256	129	3	1	254	59	308	5.47e-76	239
MS.gene28996.t1	MTR_5g019010	43.820	267	135	4	2	259	57	317	5.01e-74	234
MS.gene28996.t1	MTR_5g018990	44.569	267	135	4	1	259	57	318	1.67e-70	225
MS.gene28996.t1	MTR_3g058240	41.887	265	142	2	2	259	22	281	2.99e-70	223
MS.gene28996.t1	MTR_4g104550	44.402	259	133	5	1	253	47	300	8.75e-70	223
MS.gene28996.t1	MTR_3g058250	43.019	265	139	2	2	259	56	315	1.77e-69	222
MS.gene28996.t1	MTR_3g058220	42.322	267	137	3	2	259	57	315	2.13e-69	222
MS.gene28996.t1	MTR_6g035100	43.511	262	137	4	1	259	57	310	5.92e-69	221
MS.gene28996.t1	MTR_4g104610	43.019	265	135	5	2	253	48	309	2.27e-68	219
MS.gene28996.t1	MTR_3g058390	42.264	265	141	2	2	259	56	315	2.32e-68	219
MS.gene28996.t1	MTR_5g018980	43.866	269	135	4	1	258	56	319	2.97e-68	219
MS.gene28996.t1	MTR_0554s0020	43.561	264	138	2	2	259	58	316	4.37e-68	219
MS.gene28996.t1	MTR_5g073250	42.188	256	141	3	1	254	59	309	1.33e-67	217
MS.gene28996.t1	MTR_3g057910	41.221	262	140	3	1	254	57	312	2.21e-67	217
MS.gene28996.t1	MTR_3g058000	40.226	266	146	3	2	259	59	319	2.49e-67	217
MS.gene28996.t1	MTR_3g076560	41.729	266	142	4	1	259	70	329	3.02e-67	217
MS.gene28996.t1	MTR_6g462640	40.377	265	146	2	2	259	56	315	9.13e-67	215
MS.gene28996.t1	MTR_3g057860	41.667	264	146	3	1	259	56	316	1.28e-66	215
MS.gene28996.t1	MTR_5g094560	41.016	256	144	3	1	254	59	309	1.61e-66	214
MS.gene28996.t1	MTR_5g094840	40.458	262	148	3	1	259	64	320	1.63e-66	215
MS.gene28996.t1	MTR_1g023730	42.910	268	138	5	2	254	53	320	3.86e-66	214
MS.gene28996.t1	MTR_5g094550	41.797	256	142	3	1	254	59	309	7.47e-66	213
MS.gene28996.t1	MTR_3g058210	41.509	265	143	3	2	259	58	317	1.52e-65	212
MS.gene28996.t1	MTR_4g089030	40.075	267	148	3	2	259	68	331	1.61e-65	213
MS.gene28996.t1	MTR_5g094660	39.216	255	149	2	1	254	59	308	3.65e-65	211
MS.gene28996.t1	MTR_3g057800	40.152	264	148	3	1	259	55	313	4.02e-65	211
MS.gene28996.t1	MTR_3g058400	41.667	264	143	2	2	259	58	316	6.18e-65	211
MS.gene28996.t1	MTR_3g057970	42.586	263	134	5	1	258	53	303	2.01e-64	209
MS.gene28996.t1	MTR_5g094520	41.016	256	144	3	1	254	90	340	2.18e-64	210
MS.gene28996.t1	MTR_5g094540	40.000	260	149	3	1	258	59	313	3.07e-64	209
MS.gene28996.t1	MTR_1g035190	40.000	265	145	5	2	258	41	299	4.28e-64	208
MS.gene28996.t1	MTR_3g058110	42.697	267	136	5	2	258	59	318	1.35e-63	207
MS.gene28996.t1	MTR_3g057900	40.977	266	137	5	1	258	56	309	1.56e-63	207
MS.gene28996.t1	MTR_1g023700	40.149	269	144	5	2	254	54	321	2.09e-63	207
MS.gene28996.t1	MTR_5g094570	40.392	255	145	3	2	254	60	309	2.15e-63	206
MS.gene28996.t1	MTR_1g442730	41.132	265	142	4	2	258	55	313	2.66e-63	206
MS.gene28996.t1	MTR_3g058060	40.377	265	146	3	2	259	59	318	2.89e-63	208
MS.gene28996.t1	MTR_1g023720	41.791	268	141	5	2	254	53	320	3.79e-63	206
MS.gene28996.t1	MTR_3g058230	43.320	247	127	4	19	259	3	242	8.20e-63	203
MS.gene28996.t1	MTR_5g073320	40.467	257	144	4	1	254	60	310	9.43e-63	205
MS.gene28996.t1	MTR_8g466180	39.850	266	147	3	2	259	55	315	1.03e-62	205
MS.gene28996.t1	MTR_4g048580	39.453	256	148	3	1	254	59	309	1.14e-62	204
MS.gene28996.t1	MTR_6g034965	39.147	258	150	3	3	259	59	310	2.30e-62	204
MS.gene28996.t1	MTR_3g057980	39.098	266	142	5	1	258	56	309	1.99e-61	201
MS.gene28996.t1	MTR_4g104540	43.333	240	128	4	19	253	3	239	3.68e-61	199
MS.gene28996.t1	MTR_4g089020	38.783	263	151	3	2	259	50	307	5.17e-60	197
MS.gene28996.t1	MTR_0022s0290	37.500	272	152	3	3	259	62	330	6.31e-60	197
MS.gene28996.t1	MTR_8g020940	38.113	265	157	4	1	259	55	318	3.35e-58	193
MS.gene28996.t1	MTR_1g035140	40.000	265	143	6	2	258	58	314	7.16e-58	192
MS.gene28996.t1	MTR_4g089025	37.879	264	155	3	2	259	72	332	8.02e-58	192
MS.gene28996.t1	MTR_8g020950	38.868	265	155	3	1	259	57	320	1.21e-57	192
MS.gene28996.t1	MTR_5g094520	40.000	240	137	3	17	254	1	235	1.37e-57	189
MS.gene28996.t1	MTR_4g026200	38.824	255	151	3	4	254	52	305	2.38e-57	191
MS.gene28996.t1	MTR_3g025260	38.202	267	154	7	2	259	52	316	4.62e-57	190
MS.gene28996.t1	MTR_7g012330	37.165	261	156	4	3	257	56	314	6.03e-57	189
MS.gene28996.t1	MTR_5g023680	40.230	261	149	4	3	258	27	285	7.74e-57	189
MS.gene28996.t1	MTR_4g025950	35.484	248	152	3	3	244	51	296	2.73e-56	183
MS.gene28996.t1	MTR_4g026050	37.600	250	151	3	3	248	51	299	2.86e-56	187
MS.gene28996.t1	MTR_4g025980	37.452	259	158	3	3	258	52	309	1.04e-55	186
MS.gene28996.t1	MTR_5g470730	37.313	268	153	6	1	259	56	317	1.16e-55	184
MS.gene28996.t1	MTR_4g089055	37.879	264	152	4	2	259	72	329	1.63e-55	186
MS.gene28996.t1	MTR_4g025970	35.317	252	155	3	3	248	51	300	1.68e-55	186
MS.gene28996.t1	MTR_0059s0170	37.358	265	151	4	2	258	58	315	1.81e-55	186
MS.gene28996.t1	MTR_5g095290	38.077	260	153	4	1	258	61	314	3.73e-55	185
MS.gene28996.t1	MTR_4g104640	39.179	268	151	4	1	259	67	331	3.90e-55	185
MS.gene28996.t1	MTR_5g073230	38.431	255	134	6	3	254	64	298	1.73e-54	183
MS.gene28996.t1	MTR_4g104660	38.722	266	153	5	1	259	65	327	2.26e-54	183
MS.gene28996.t1	MTR_5g045770	34.921	252	155	4	3	248	51	299	2.33e-54	182
MS.gene28996.t1	MTR_4g109470	37.218	266	158	5	1	259	50	313	3.12e-54	182
MS.gene28996.t1	MTR_2g010530	39.015	264	147	3	1	259	54	308	4.05e-54	182
MS.gene28996.t1	MTR_5g095260	36.398	261	157	3	1	258	61	315	6.75e-54	182
MS.gene28996.t1	MTR_6g039630	39.545	220	126	2	2	221	55	267	7.43e-54	176
MS.gene28996.t1	MTR_3g076550	40.928	237	125	5	33	259	87	318	3.12e-53	179
MS.gene28996.t1	MTR_6g035115	37.165	261	156	3	1	259	57	311	3.87e-53	179
MS.gene28996.t1	MTR_7g012860	38.697	261	152	5	3	257	55	313	5.80e-53	179
MS.gene28996.t1	MTR_0287s0060	38.697	261	152	5	3	257	55	313	5.80e-53	179
MS.gene28996.t1	MTR_4g026070	38.983	236	139	3	13	244	61	295	7.08e-53	174
MS.gene28996.t1	MTR_3g058380	37.657	239	138	2	27	259	2	235	1.30e-52	176
MS.gene28996.t1	MTR_5g072980	39.841	251	144	5	9	253	61	310	4.09e-52	177
MS.gene28996.t1	MTR_5g072930	39.841	251	144	5	9	253	61	310	4.09e-52	177
MS.gene28996.t1	MTR_3g025230	39.474	266	152	5	2	259	52	316	4.79e-52	177
MS.gene28996.t1	MTR_2g065360	34.733	262	165	5	2	259	27	286	6.84e-52	176
MS.gene28996.t1	MTR_3g024520	39.474	266	152	5	2	259	52	316	8.18e-52	176
MS.gene28996.t1	MTR_6g084770	36.431	269	155	7	1	259	56	318	9.62e-52	176
MS.gene28996.t1	MTR_8g020960	35.094	265	165	4	1	259	56	319	2.53e-50	172
MS.gene28996.t1	MTR_5g070710	35.249	261	156	5	1	254	55	309	6.70e-50	171
MS.gene28996.t1	MTR_8g091690	35.827	254	160	3	2	254	48	299	1.03e-49	170
MS.gene28996.t1	MTR_5g073020	36.653	251	152	4	9	253	61	310	6.88e-49	168
MS.gene28996.t1	MTR_5g070920	37.079	267	154	6	1	259	56	316	1.11e-48	168
MS.gene28996.t1	MTR_3g077460	35.019	257	134	4	3	259	28	251	4.29e-48	164
MS.gene28996.t1	MTR_3g436390	34.749	259	159	7	1	254	55	308	2.02e-47	164
MS.gene28996.t1	MTR_7g087520	34.201	269	163	5	1	257	56	322	5.50e-47	164
MS.gene28996.t1	MTR_5g070700	35.075	268	159	6	1	259	56	317	1.02e-46	163
MS.gene28996.t1	MTR_5g070690	34.328	268	161	6	1	259	54	315	3.13e-46	161
MS.gene28996.t1	MTR_5g070800	34.328	268	161	6	1	259	54	315	3.13e-46	161
MS.gene28996.t1	MTR_5g070850	34.328	268	161	7	1	259	56	317	3.17e-46	161
MS.gene28996.t1	MTR_5g021390	35.227	264	153	6	3	254	65	322	1.09e-44	157
MS.gene28996.t1	MTR_4g133760	40.000	245	107	5	19	259	3	211	2.20e-44	154
MS.gene28996.t1	MTR_8g076290	34.848	264	153	6	3	253	56	313	9.61e-44	155
MS.gene28996.t1	MTR_4g071710	35.055	271	149	7	3	253	58	321	1.43e-43	154
MS.gene28996.t1	MTR_8g469300	33.829	269	163	5	2	259	55	319	2.15e-43	154
MS.gene28996.t1	MTR_3g020780	30.037	273	173	5	1	259	54	322	2.33e-43	154
MS.gene28996.t1	MTR_0171s0020	33.086	269	165	5	2	259	57	321	3.13e-42	151
MS.gene28996.t1	MTR_3g436540	33.333	261	163	6	1	254	59	315	1.62e-41	149
MS.gene28996.t1	MTR_0181s0030	33.835	266	166	5	1	259	53	315	1.89e-41	149
MS.gene28996.t1	MTR_7g092620	34.559	272	160	6	1	259	53	319	9.38e-41	147
MS.gene28996.t1	MTR_0171s0010	30.970	268	172	6	3	259	58	323	1.14e-40	147
MS.gene28996.t1	MTR_8g468780	32.271	251	157	5	19	259	3	250	9.82e-40	143
MS.gene28996.t1	MTR_1g107295	30.147	272	173	4	3	259	59	328	1.47e-39	144
MS.gene28996.t1	MTR_7g056103	34.749	259	157	7	3	252	55	310	2.52e-39	143
MS.gene28996.t1	MTR_4g062500	31.618	272	167	7	3	259	56	323	2.91e-39	143
MS.gene28996.t1	MTR_6g008530	31.900	279	167	5	2	258	63	340	2.95e-39	143
MS.gene28996.t1	MTR_7g092600	32.558	258	168	4	5	258	62	317	5.30e-39	142
MS.gene28996.t1	MTR_4g062510	30.147	272	173	4	3	259	58	327	1.16e-38	141
MS.gene28996.t1	MTR_5g095220	30.769	260	157	4	1	259	48	285	7.25e-38	138
MS.gene28996.t1	MTR_6g008500	31.142	289	166	5	2	258	59	346	8.55e-38	139
MS.gene28996.t1	MTR_4g102310	31.298	262	173	4	3	259	60	319	1.20e-37	138
MS.gene28996.t1	MTR_4g088425	32.549	255	158	4	2	250	61	307	3.23e-37	137
MS.gene28996.t1	MTR_4g094772	33.588	262	156	7	3	259	55	303	4.78e-37	136
MS.gene28996.t1	MTR_4g062530	31.227	269	159	7	3	259	56	310	6.15e-37	135
MS.gene28996.t1	MTR_6g008600	31.429	280	166	6	2	258	62	338	1.39e-36	135
MS.gene28996.t1	MTR_4g088400	32.584	267	159	7	2	254	68	327	6.72e-36	134
MS.gene28996.t1	MTR_6g008620	31.408	277	167	6	2	258	63	336	6.99e-36	134
MS.gene28996.t1	MTR_7g028020	31.502	273	157	7	3	259	53	311	1.96e-35	132
MS.gene28996.t1	MTR_5g094535	36.559	186	96	3	1	186	59	222	2.20e-35	126
MS.gene28996.t1	MTR_7g027960	31.136	273	158	7	3	259	53	311	4.19e-35	132
MS.gene28996.t1	MTR_1g107305	28.413	271	171	5	3	255	59	324	4.55e-35	129
MS.gene28996.t1	MTR_0171s0030	32.489	237	145	6	34	259	1	233	1.12e-34	129
MS.gene28996.t1	MTR_5g016410	30.712	267	168	7	3	259	53	312	1.87e-34	129
MS.gene28996.t1	MTR_5g018480	29.707	239	155	4	1	227	61	298	2.17e-34	126
MS.gene28996.t1	MTR_4g102280	30.798	263	174	5	3	259	65	325	2.71e-34	129
MS.gene28996.t1	MTR_8g036185	33.459	266	157	8	5	254	57	318	3.24e-34	129
MS.gene28996.t1	MTR_2g437840	30.451	266	167	6	5	259	54	312	2.07e-33	127
MS.gene28996.t1	MTR_2g450040	32.479	234	146	5	2	224	61	293	2.18e-33	127
MS.gene28996.t1	MTR_8g012585	33.585	265	158	8	9	258	1	262	2.77e-33	126
MS.gene28996.t1	MTR_8g104080	34.659	176	108	2	1	174	55	225	4.71e-33	122
MS.gene28996.t1	MTR_5g070980	35.593	177	107	2	1	175	56	227	5.13e-33	120
MS.gene28996.t1	MTR_4g018800	29.304	273	172	4	2	254	61	332	5.59e-33	126
MS.gene28996.t1	MTR_6g008640	30.545	275	172	4	2	258	61	334	9.36e-33	125
MS.gene28996.t1	MTR_2g437880	29.630	270	172	5	3	259	53	317	1.72e-32	124
MS.gene28996.t1	MTR_4g035330	31.801	261	162	6	3	259	52	300	2.20e-32	124
MS.gene28996.t1	MTR_4g077210	30.970	268	168	8	3	259	56	317	8.50e-32	122
MS.gene28996.t1	MTR_4g094775	29.811	265	169	7	5	259	55	312	1.02e-31	122
MS.gene28996.t1	MTR_4g088415	31.224	237	150	5	2	227	66	300	1.51e-31	120
MS.gene28996.t1	MTR_8g046210	30.403	273	162	7	2	259	61	320	2.63e-31	121
MS.gene28996.t1	MTR_0638s0020	28.846	260	140	5	2	259	27	243	5.28e-31	119
MS.gene28996.t1	MTR_5g007460	30.515	272	165	7	2	259	29	290	2.27e-30	118
MS.gene28996.t1	MTR_6g042540	29.562	274	171	7	3	257	57	327	3.81e-30	118
MS.gene28996.t1	MTR_1g031700	32.222	270	159	8	2	259	54	311	5.21e-30	117
MS.gene28996.t1	MTR_8g046240	30.741	270	165	8	2	259	61	320	5.74e-30	117
MS.gene28996.t1	MTR_5g016440	28.462	260	179	4	3	259	52	307	8.31e-30	117
MS.gene28996.t1	MTR_6g008650	28.159	277	178	4	2	258	61	336	9.17e-30	117
MS.gene28996.t1	MTR_1g103670	32.353	272	156	10	2	259	54	311	9.67e-30	117
MS.gene28996.t1	MTR_1g103680	31.599	269	162	7	2	259	55	312	1.70e-29	116
MS.gene28996.t1	MTR_6g042610	29.455	275	171	7	3	257	57	328	4.29e-29	115
MS.gene28996.t1	MTR_4g095050	30.483	269	171	5	3	259	52	316	5.58e-29	114
MS.gene28996.t1	MTR_5g073240	51.648	91	44	0	1	91	103	193	1.77e-28	107
MS.gene28996.t1	MTR_2g073420	29.167	264	176	6	2	259	64	322	3.00e-28	112
MS.gene28996.t1	MTR_7g103450	26.493	268	186	6	1	259	65	330	8.06e-28	111
MS.gene28996.t1	MTR_1g097240	27.612	268	170	7	2	254	47	305	1.74e-27	110
MS.gene28996.t1	MTR_0608s0010	30.483	269	151	7	2	259	54	297	2.69e-27	108
MS.gene28996.t1	MTR_6g008430	29.818	275	169	8	2	258	61	329	5.29e-27	109
MS.gene28996.t1	MTR_5g094670	32.044	181	78	2	1	181	59	194	1.46e-26	104
MS.gene28996.t1	MTR_1g055325	29.344	259	172	7	2	254	74	327	2.67e-26	107
MS.gene28996.t1	MTR_3g057990	29.126	206	103	2	2	207	39	201	9.93e-26	100
MS.gene28996.t1	MTR_8g012590	29.134	254	168	5	9	258	67	312	1.16e-25	105
MS.gene28996.t1	MTR_6g022450	28.462	260	173	6	9	258	67	323	1.95e-25	104
MS.gene28996.t1	MTR_5g045250	29.851	268	166	10	2	259	78	333	2.19e-25	104
MS.gene28996.t1	MTR_4g471620	44.915	118	62	2	3	119	58	173	3.01e-25	99.4
MS.gene28996.t1	MTR_1g097220	28.736	261	172	6	1	254	81	334	3.60e-25	104
MS.gene28996.t1	MTR_5g007450	29.167	264	167	8	2	259	62	311	7.03e-25	103
MS.gene28996.t1	MTR_5g094460	30.220	182	93	4	1	181	50	198	7.22e-25	102
MS.gene28996.t1	MTR_5g007550	29.167	264	167	8	2	259	62	311	7.53e-25	103
MS.gene28996.t1	MTR_4g078110	28.736	261	166	6	2	259	48	291	1.07e-24	102
MS.gene28996.t1	MTR_3g014880	27.562	283	173	5	2	258	61	337	1.61e-24	102
MS.gene28996.t1	MTR_2g073440	28.030	264	162	6	2	259	53	294	7.59e-24	100
MS.gene28996.t1	MTR_7g075610	28.044	271	175	7	2	259	54	317	3.20e-23	98.6
MS.gene28996.t1	MTR_4g088160	24.074	270	180	8	3	259	57	314	4.77e-23	98.2
MS.gene28996.t1	MTR_1g091003	27.481	262	171	7	2	254	54	305	5.46e-23	97.8
MS.gene28996.t1	MTR_7g075540	27.652	264	182	6	2	259	54	314	1.24e-22	96.7
MS.gene28996.t1	MTR_4g088195	24.815	270	178	8	3	259	57	314	1.70e-22	96.7
MS.gene28996.t1	MTR_1g037370	27.273	264	180	7	2	259	51	308	1.92e-22	96.3
MS.gene28996.t1	MTR_8g091680	28.125	256	138	6	2	254	48	260	4.22e-22	95.1
MS.gene28996.t1	MTR_4g088170	24.815	270	178	8	3	259	57	314	5.01e-22	95.1
MS.gene28996.t1	MTR_7g075390	27.778	270	178	10	2	259	54	318	6.85e-22	94.7
MS.gene28996.t1	MTR_7g075580	26.766	269	180	6	2	259	54	316	2.67e-21	93.2
MS.gene28996.t1	MTR_7g075600	25.385	260	185	6	2	254	54	311	3.17e-21	92.8
MS.gene28996.t1	MTR_4g026030	34.416	154	96	3	105	254	1	153	4.81e-21	90.9
MS.gene28996.t1	MTR_8g027040	28.514	249	161	10	16	259	121	357	1.30e-20	91.3
MS.gene28996.t1	MTR_5g056720	27.468	233	145	4	9	238	24	235	1.81e-20	90.1
MS.gene28996.t1	MTR_5g094790	28.000	225	115	8	39	258	1	183	1.95e-20	87.0
MS.gene28996.t1	MTR_1g091023	25.581	258	181	6	2	254	54	305	4.34e-20	89.4
MS.gene28996.t1	MTR_1g116890	25.781	256	178	6	2	247	55	308	8.15e-20	88.6
MS.gene28996.t1	MTR_5g070830	29.500	200	124	6	65	254	230	422	1.15e-19	88.6
MS.gene28996.t1	MTR_2g073480	26.908	249	154	6	17	259	1	227	2.11e-19	87.0
MS.gene28996.t1	MTR_1g091010	25.581	258	181	6	2	254	53	304	3.36e-19	87.0
MS.gene28996.t1	MTR_8g073950	27.843	255	162	8	16	253	77	326	9.44e-19	85.5
MS.gene28996.t1	MTR_8g073960	28.405	257	158	9	16	253	81	330	3.61e-18	84.0
MS.gene28996.t1	MTR_8g076372	28.016	257	159	9	16	253	81	330	2.04e-17	81.6
MS.gene28996.t1	MTR_5g075450	26.766	269	179	7	3	259	55	317	3.99e-17	80.9
MS.gene28996.t1	MTR_3g467220	24.514	257	179	8	9	253	75	328	6.11e-17	80.5
MS.gene28996.t1	MTR_8g076390	27.642	246	156	8	16	244	81	321	2.25e-16	78.6
MS.gene28996.t1	MTR_3g465300	26.104	249	171	8	16	253	84	330	2.47e-16	78.6
MS.gene28996.t1	MTR_1g111240	26.038	265	184	6	3	259	87	347	6.43e-16	77.4
MS.gene28996.t1	MTR_0155s0010	35.052	97	63	0	3	99	38	134	8.28e-16	72.8
MS.gene28996.t1	MTR_3g467200	24.096	249	176	8	16	253	87	333	1.40e-15	76.3
MS.gene28996.t1	MTR_6g084910	29.412	119	77	2	58	174	1	114	2.03e-15	71.2
MS.gene28996.t1	MTR_3g467290	24.800	250	172	7	19	253	90	338	1.49e-14	73.2
MS.gene28996.t1	MTR_5g070685	51.923	52	25	0	1	52	57	108	4.85e-14	67.4
MS.gene28996.t1	MTR_3g058150	50.000	52	26	0	19	70	3	54	2.04e-13	63.9
MS.gene28996.t1	MTR_3g025250	38.462	117	63	5	139	254	9	117	3.36e-12	65.5
MS.gene28996.t1	MTR_2g010380	23.529	255	188	4	6	254	61	314	5.52e-12	65.9
MS.gene28996.t1	MTR_8g080520	24.812	266	180	10	3	259	88	342	6.35e-12	65.5
MS.gene28996.t1	MTR_6g084760	32.530	83	54	1	58	138	1	83	1.52e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28996.t1	AT3G48280	40.856	257	146	3	3	259	51	301	3.85e-64	208
MS.gene28996.t1	AT3G48270	39.921	253	145	3	2	254	51	296	3.03e-62	203
MS.gene28996.t1	AT4G13310	37.743	257	153	3	3	255	53	306	1.08e-61	199
MS.gene28996.t1	AT3G48320	38.372	258	152	2	2	259	52	302	8.18e-61	199
MS.gene28996.t1	AT4G13310	37.548	261	156	3	3	259	53	310	2.08e-60	199
MS.gene28996.t1	AT3G48300	39.526	253	146	2	2	254	49	294	1.53e-59	196
MS.gene28996.t1	AT3G48300	39.526	253	146	2	2	254	51	296	1.60e-59	196
MS.gene28996.t1	AT3G48310	36.822	258	156	2	2	259	52	302	4.38e-59	195
MS.gene28996.t1	AT3G48290	40.698	258	146	3	2	259	53	303	5.82e-58	192
MS.gene28996.t1	AT3G26310	40.304	263	150	5	1	258	49	309	3.96e-57	190
MS.gene28996.t1	AT3G26300	40.684	263	149	5	1	258	50	310	1.70e-56	188
MS.gene28996.t1	AT5G24960	36.923	260	159	3	2	259	53	309	2.22e-56	186
MS.gene28996.t1	AT5G24960	36.923	260	159	3	2	259	53	309	1.88e-55	186
MS.gene28996.t1	AT5G24950	37.500	256	153	4	2	254	52	303	3.95e-55	185
MS.gene28996.t1	AT2G30770	37.548	261	155	4	2	259	53	308	8.65e-54	181
MS.gene28996.t1	AT5G57260	37.643	263	158	4	1	258	49	310	1.23e-53	181
MS.gene28996.t1	AT4G13290	34.749	259	150	5	3	255	54	299	4.21e-53	179
MS.gene28996.t1	AT5G25120	38.760	258	149	5	2	254	49	302	5.42e-53	179
MS.gene28996.t1	AT3G48290	40.741	243	137	3	2	244	53	288	1.08e-52	179
MS.gene28996.t1	AT4G31500	38.431	255	153	3	2	253	50	303	2.23e-52	177
MS.gene28996.t1	AT2G24180	35.985	264	163	4	1	259	55	317	4.41e-52	177
MS.gene28996.t1	AT1G11610	35.249	261	161	4	2	259	53	308	6.34e-52	176
MS.gene28996.t1	AT1G11610	35.249	261	161	4	2	259	53	308	8.89e-52	176
MS.gene28996.t1	AT3G26330	36.882	263	159	5	1	258	50	310	8.90e-52	176
MS.gene28996.t1	AT2G30750	36.538	260	159	3	2	259	53	308	1.44e-51	175
MS.gene28996.t1	AT3G26320	38.403	263	155	6	1	258	50	310	1.46e-51	176
MS.gene28996.t1	AT3G26210	35.361	263	165	3	1	258	50	312	4.86e-51	174
MS.gene28996.t1	AT5G07990	35.741	263	161	4	2	259	53	312	8.86e-51	174
MS.gene28996.t1	AT3G26170	35.849	265	163	3	1	258	49	313	3.00e-50	172
MS.gene28996.t1	AT5G06900	34.733	262	164	5	3	259	55	314	5.09e-50	171
MS.gene28996.t1	AT4G13770	36.471	255	158	3	2	253	51	304	6.00e-50	171
MS.gene28996.t1	AT5G25130	37.500	256	155	3	2	254	49	302	1.13e-49	170
MS.gene28996.t1	AT5G25140	37.209	258	153	5	2	254	49	302	2.04e-49	170
MS.gene28996.t1	AT3G26290	36.015	261	160	5	3	258	65	323	2.06e-49	170
MS.gene28996.t1	AT3G26290	36.015	261	160	5	3	258	52	310	2.31e-49	169
MS.gene28996.t1	AT3G26180	35.094	265	165	3	1	258	49	313	5.23e-49	169
MS.gene28996.t1	AT1G13110	32.331	266	173	4	1	259	51	316	6.96e-49	168
MS.gene28996.t1	AT1G13080	35.849	265	162	5	1	258	50	313	1.40e-48	167
MS.gene28996.t1	AT5G25180	35.659	258	157	5	2	254	49	302	1.13e-47	165
MS.gene28996.t1	AT3G53280	30.916	262	173	3	3	258	49	308	4.02e-47	164
MS.gene28996.t1	AT2G02580	38.783	263	154	5	1	258	50	310	2.63e-46	161
MS.gene28996.t1	AT3G26190	33.588	262	168	4	3	258	49	310	7.80e-46	160
MS.gene28996.t1	AT3G44250	32.283	254	165	3	5	252	51	303	1.43e-45	159
MS.gene28996.t1	AT5G42590	34.118	255	164	2	2	254	52	304	3.14e-45	159
MS.gene28996.t1	AT3G26200	33.206	262	169	3	3	258	49	310	1.28e-44	157
MS.gene28996.t1	AT3G26160	32.075	265	173	3	1	258	49	313	5.72e-44	155
MS.gene28996.t1	AT1G13090	32.819	259	165	4	7	258	53	309	1.80e-43	154
MS.gene28996.t1	AT1G01280	32.210	267	169	6	1	257	51	315	8.21e-43	152
MS.gene28996.t1	AT3G26150	32.453	265	172	4	1	258	49	313	9.38e-42	149
MS.gene28996.t1	AT1G13100	33.969	262	161	6	7	258	50	309	2.26e-41	148
MS.gene28996.t1	AT3G26280	31.939	263	171	4	3	258	53	314	3.96e-41	148
MS.gene28996.t1	AT3G26280	31.939	263	171	4	3	258	70	331	5.29e-41	147
MS.gene28996.t1	AT1G13090	31.967	244	157	4	7	243	53	294	8.79e-41	142
MS.gene28996.t1	AT4G20240	32.549	255	167	3	2	254	53	304	1.36e-40	144
MS.gene28996.t1	AT4G20240	32.549	255	167	3	2	254	53	304	4.10e-40	144
MS.gene28996.t1	AT3G26270	33.083	266	168	5	1	258	51	314	9.30e-39	141
MS.gene28996.t1	AT2G42250	34.902	255	160	4	4	254	63	315	3.65e-38	140
MS.gene28996.t1	AT4G36220	31.985	272	155	5	3	253	61	323	6.85e-38	139
MS.gene28996.t1	AT5G04330	31.086	267	172	4	3	259	53	317	5.47e-37	137
MS.gene28996.t1	AT3G26230	33.459	266	165	7	3	258	47	310	5.94e-37	136
MS.gene28996.t1	AT5G44620	30.769	260	171	5	3	255	67	324	2.74e-36	135
MS.gene28996.t1	AT4G22710	31.395	258	168	7	3	254	75	329	7.40e-36	134
MS.gene28996.t1	AT4G12300	32.576	264	169	6	3	259	63	324	8.35e-36	134
MS.gene28996.t1	AT4G12320	30.451	266	174	6	3	259	63	326	1.10e-35	133
MS.gene28996.t1	AT1G50520	30.268	261	171	5	5	258	67	323	2.20e-35	132
MS.gene28996.t1	AT3G26830	29.880	251	167	4	7	250	53	301	4.41e-35	131
MS.gene28996.t1	AT3G26220	31.579	266	170	6	3	258	50	313	4.55e-35	131
MS.gene28996.t1	AT4G22690	31.008	258	169	7	3	254	106	360	5.58e-35	132
MS.gene28996.t1	AT3G20090	30.418	263	173	6	1	257	63	321	7.04e-35	131
MS.gene28996.t1	AT4G31970	31.868	273	166	5	5	258	58	329	1.10e-34	130
MS.gene28996.t1	AT4G31940	31.884	276	163	7	5	258	58	330	1.59e-34	130
MS.gene28996.t1	AT4G37400	29.502	261	173	6	3	259	52	305	7.15e-34	128
MS.gene28996.t1	AT3G53300	29.658	263	177	4	3	258	49	310	2.50e-33	126
MS.gene28996.t1	AT4G12330	28.302	265	178	6	3	259	67	327	2.82e-33	127
MS.gene28996.t1	AT2G45570	30.970	268	172	6	2	259	58	322	8.56e-33	125
MS.gene28996.t1	AT4G37310	30.303	264	172	6	5	259	55	315	9.03e-33	125
MS.gene28996.t1	AT2G14100	27.481	262	185	3	1	259	63	322	4.53e-32	123
MS.gene28996.t1	AT5G67310	33.083	266	162	9	3	259	63	321	5.14e-32	123
MS.gene28996.t1	AT2G40890	33.840	263	153	8	10	259	55	309	1.30e-31	122
MS.gene28996.t1	AT2G45560	29.213	267	177	6	2	259	58	321	3.74e-31	120
MS.gene28996.t1	AT4G37340	30.830	253	161	6	14	259	65	310	1.36e-30	119
MS.gene28996.t1	AT1G33720	29.213	267	177	6	2	259	58	321	1.38e-30	119
MS.gene28996.t1	AT5G10600	28.626	262	174	6	5	259	70	325	6.65e-30	117
MS.gene28996.t1	AT4G15360	28.846	260	178	4	3	257	62	319	6.89e-30	117
MS.gene28996.t1	AT3G20960	28.405	257	174	6	7	257	67	319	7.60e-30	117
MS.gene28996.t1	AT5G57220	30.798	263	168	8	3	259	51	305	2.82e-29	115
MS.gene28996.t1	AT4G37320	28.679	265	174	7	3	259	53	310	4.37e-29	115
MS.gene28996.t1	AT5G06905	28.016	257	174	5	5	254	54	306	4.52e-29	115
MS.gene28996.t1	AT2G23220	29.762	252	164	6	14	259	81	325	5.46e-29	115
MS.gene28996.t1	AT5G42580	28.185	259	171	4	2	258	60	305	5.95e-29	114
MS.gene28996.t1	AT4G37430	28.519	270	172	7	3	259	49	310	6.56e-29	114
MS.gene28996.t1	AT3G32047	26.718	262	186	5	1	259	62	320	8.44e-29	114
MS.gene28996.t1	AT4G12310	29.323	266	177	6	3	259	65	328	1.37e-28	114
MS.gene28996.t1	AT3G61040	31.154	260	164	7	2	254	53	304	1.95e-28	112
MS.gene28996.t1	AT5G35715	27.419	248	174	3	17	258	1	248	1.95e-28	112
MS.gene28996.t1	AT2G45580	29.151	271	174	8	2	259	58	323	5.28e-28	110
MS.gene28996.t1	AT3G20130	24.710	259	190	3	3	258	64	320	6.70e-28	112
MS.gene28996.t1	AT3G61040	31.154	260	164	7	2	254	53	304	7.41e-28	111
MS.gene28996.t1	AT2G25160	29.964	277	164	11	3	258	57	324	7.87e-28	110
MS.gene28996.t1	AT4G37410	27.170	265	176	8	3	259	52	307	9.96e-28	111
MS.gene28996.t1	AT2G25160	29.964	277	164	11	3	258	57	324	1.43e-27	110
MS.gene28996.t1	AT2G45550	29.213	267	177	6	2	259	58	321	2.13e-27	110
MS.gene28996.t1	AT2G45580	29.151	271	174	8	2	259	58	323	2.18e-27	110
MS.gene28996.t1	AT3G20940	27.519	258	177	5	3	254	64	317	2.54e-27	110
MS.gene28996.t1	AT1G50560	27.692	260	180	4	5	258	67	324	3.34e-27	110
MS.gene28996.t1	AT2G23190	29.730	259	167	7	7	259	105	354	3.90e-27	109
MS.gene28996.t1	AT2G27000	26.616	263	183	5	3	259	61	319	5.75e-27	109
MS.gene28996.t1	AT3G53290	28.837	215	147	3	35	243	11	225	7.50e-27	107
MS.gene28996.t1	AT3G20110	28.030	264	179	7	1	258	59	317	9.74e-27	108
MS.gene28996.t1	AT4G20235	32.203	177	96	3	29	205	82	234	1.45e-26	106
MS.gene28996.t1	AT5G10610	27.376	263	174	8	5	259	56	309	1.96e-26	107
MS.gene28996.t1	AT3G52970	29.688	256	169	7	2	247	57	311	2.68e-26	107
MS.gene28996.t1	AT5G09970	29.918	244	159	6	16	254	106	342	3.67e-26	107
MS.gene28996.t1	AT3G25180	27.481	262	177	6	6	258	65	322	4.49e-26	105
MS.gene28996.t1	AT3G25180	27.481	262	177	6	6	258	65	322	1.01e-25	105
MS.gene28996.t1	AT3G20120	27.612	268	167	9	1	254	61	315	2.17e-25	104
MS.gene28996.t1	AT3G28740	30.400	250	161	7	16	259	76	318	3.22e-25	104
MS.gene28996.t1	AT4G15350	25.385	260	188	4	3	258	57	314	6.70e-25	103
MS.gene28996.t1	AT4G37330	29.600	250	164	7	14	259	66	307	8.03e-25	103
MS.gene28996.t1	AT5G36220	30.469	256	158	8	14	259	71	316	9.96e-25	102
MS.gene28996.t1	AT3G20950	25.095	263	186	6	3	259	68	325	2.07e-24	102
MS.gene28996.t1	AT3G52970	28.148	270	169	7	2	247	57	325	2.50e-24	102
MS.gene28996.t1	AT1G74550	29.615	260	165	7	5	259	50	296	2.82e-24	101
MS.gene28996.t1	AT2G05180	24.904	261	190	4	1	257	61	319	3.01e-24	100
MS.gene28996.t1	AT2G45560	27.004	237	164	5	2	229	58	294	3.15e-24	99.4
MS.gene28996.t1	AT5G47990	25.954	262	184	5	3	258	64	321	3.93e-24	101
MS.gene28996.t1	AT3G20100	25.182	274	175	7	3	260	63	322	4.00e-24	101
MS.gene28996.t1	AT4G37370	27.381	252	170	6	14	259	65	309	4.58e-24	100
MS.gene28996.t1	AT4G37360	30.268	261	164	7	7	259	60	310	9.40e-24	100
MS.gene28996.t1	AT3G20140	24.903	257	184	4	3	254	64	316	2.85e-23	98.6
MS.gene28996.t1	AT1G13710	28.996	269	171	9	2	259	69	328	2.09e-22	96.3
MS.gene28996.t1	AT1G74110	28.467	274	169	10	3	259	86	349	2.22e-22	96.3
MS.gene28996.t1	AT3G20080	27.547	265	162	8	5	253	66	316	6.23e-22	95.1
MS.gene28996.t1	AT3G20080	27.547	265	162	8	5	253	66	316	6.23e-22	95.1
MS.gene28996.t1	AT2G45560	28.333	180	125	3	2	177	58	237	8.90e-22	91.3
MS.gene28996.t1	AT4G31950	28.623	276	160	10	5	258	58	318	5.93e-21	92.0
MS.gene28996.t1	AT2G27010	29.771	262	146	9	3	253	57	291	6.86e-21	92.0
MS.gene28996.t1	AT4G15330	24.324	259	191	3	3	258	60	316	1.15e-19	88.2
MS.gene28996.t1	AT1G74540	27.547	265	170	8	5	259	50	302	1.30e-19	88.2
MS.gene28996.t1	AT3G53305	38.889	126	75	1	17	140	1	126	2.20e-19	86.3
MS.gene28996.t1	AT2G46660	28.137	263	169	11	3	259	92	340	3.60e-19	87.0
MS.gene28996.t1	AT1G66540	27.228	202	129	6	68	259	4	197	2.67e-18	84.0
MS.gene28996.t1	AT3G20960	27.184	206	140	6	58	257	15	216	3.50e-18	83.6
MS.gene28996.t1	AT1G13080	29.586	169	111	5	97	258	28	195	4.64e-18	83.2
MS.gene28996.t1	AT4G15380	24.324	259	179	4	7	258	68	316	8.21e-18	82.8
MS.gene28996.t1	AT3G61880	26.894	264	175	9	3	259	88	340	2.95e-17	81.3
MS.gene28996.t1	AT3G61880	26.894	264	175	9	3	259	88	340	3.04e-17	81.3
MS.gene28996.t1	AT1G33720	27.225	191	128	5	77	259	2	189	8.82e-17	79.3
MS.gene28996.t1	AT1G33720	27.225	191	128	5	77	259	2	189	8.82e-17	79.3
MS.gene28996.t1	AT1G33720	27.225	191	128	5	77	259	2	189	8.82e-17	79.3
MS.gene28996.t1	AT1G28430	21.705	258	191	4	3	254	62	314	1.14e-16	79.7
MS.gene28996.t1	AT3G20130	22.072	222	168	3	40	258	73	292	2.58e-16	78.6
MS.gene28996.t1	AT5G05260	25.483	259	166	8	16	253	78	330	5.48e-16	77.8
MS.gene28996.t1	AT4G20235	36.170	94	58	1	112	205	9	100	1.01e-15	72.4
MS.gene28996.t1	AT3G20090	28.342	187	124	6	77	257	1	183	4.58e-15	74.3
MS.gene28996.t1	AT5G35917	24.514	257	173	6	16	253	80	334	7.12e-15	74.3
MS.gene28996.t1	AT2G22330	23.695	249	176	6	16	252	118	364	2.35e-14	72.8
MS.gene28996.t1	AT2G22330	23.695	249	176	6	16	252	95	341	2.48e-14	72.8
MS.gene28996.t1	AT4G39950	24.603	252	170	9	16	252	93	339	4.42e-14	72.0
MS.gene28996.t1	AT4G39950	24.603	252	170	9	16	252	133	379	4.79e-14	72.0
MS.gene28996.t1	AT1G33730	26.842	190	124	6	80	259	1	185	1.10e-13	70.5
MS.gene28996.t1	AT1G33730	26.842	190	124	6	80	259	1	185	1.10e-13	70.5
MS.gene28996.t1	AT3G26180	44.156	77	38	1	1	77	49	120	1.44e-12	67.0
MS.gene28996.t1	AT1G79370	23.881	268	171	9	16	253	77	341	2.11e-12	67.0

Find 59 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCAAGTTGTAAGAAAATTA+TGG	0.171620	3.1:+62783427	None:intergenic
TATCAATTTGTCCAAGATAT+TGG	0.213167	3.1:-62783123	MS.gene28996:CDS
GGTACTCATCAAGCATCTTT+TGG	0.261149	3.1:+62783018	None:intergenic
CAAGGCCTTGCAGATAAATA+TGG	0.284477	3.1:-62783452	MS.gene28996:CDS
ATCAATTTGTCCAAGATATT+GGG	0.294452	3.1:-62783122	MS.gene28996:CDS
TCGCTCCTTATAGTGCTTAC+TGG	0.299820	3.1:-62783271	MS.gene28996:CDS
AGCTTAGTTCATAGGATTGC+AGG	0.305706	3.1:-62783161	MS.gene28996:CDS
AGGATTGCAGGGTCTTATTC+AGG	0.308021	3.1:-62783149	MS.gene28996:CDS
CCAAGTTGTAAGAAAATTAT+GGG	0.332446	3.1:+62783428	None:intergenic
ACAACATTTATTACCCTTGA+TGG	0.338427	3.1:-62782539	MS.gene28996:CDS
GTTGTTTGCCGCGTAGCGTT+TGG	0.365400	3.1:-62783083	MS.gene28996:CDS
TGCATAAAGTCCCAATATCT+TGG	0.369827	3.1:+62783112	None:intergenic
AAGTTGCTAGCTTAGTTCAT+AGG	0.382300	3.1:-62783169	MS.gene28996:CDS
TGCCTCCAGTAAGCACTATA+AGG	0.382375	3.1:+62783266	None:intergenic
TGAATCCTCCAAGGAGTTCC+TGG	0.394116	3.1:+62782997	None:intergenic
CAAGGCTTGCAACAAAATAA+AGG	0.398030	3.1:-62782856	MS.gene28996:CDS
ACTGTATGAGTTTACCCTTT+TGG	0.406303	3.1:+62783208	None:intergenic
TATTGCCTTGATATTATCAA+TGG	0.425403	3.1:+62782767	None:intergenic
TTGCAGGATATGTTTGCTGC+TGG	0.434283	3.1:-62782569	MS.gene28996:intron
CAACAAAATAAAGGAGCATA+AGG	0.447004	3.1:-62782847	MS.gene28996:CDS
TTGAGCTTCTAAGTGCCAAA+AGG	0.453888	3.1:-62783223	MS.gene28996:CDS
GAATTCATACACAGCTTGAC+AGG	0.460952	3.1:-62782948	MS.gene28996:CDS
CAACATTTATTACCCTTGAT+GGG	0.463660	3.1:-62782538	MS.gene28996:CDS
AGCTCTGTCATTGCCCATCA+AGG	0.489346	3.1:+62782525	None:intergenic
TTGATATTATCAATGGTAAG+AGG	0.504189	3.1:+62782774	None:intergenic
TTTGCCGCGTAGCGTTTGGA+AGG	0.507867	3.1:-62783079	MS.gene28996:CDS
TGAGCTTCTAAGTGCCAAAA+GGG	0.509922	3.1:-62783222	MS.gene28996:CDS
TGTCCGTACAATTGTAAAAG+AGG	0.518655	3.1:+62783300	None:intergenic
TAATATCAAGGCAATAATCC+TGG	0.528167	3.1:-62782760	MS.gene28996:intron
GATGAGTACCAGGAACTCCT+TGG	0.532404	3.1:-62783005	MS.gene28996:CDS
GGAAGGGACTTTACAGAAGG+AGG	0.538945	3.1:-62783062	MS.gene28996:CDS
TCTTACCATTGATAATATCA+AGG	0.540642	3.1:-62782772	MS.gene28996:CDS
TTCATCTGCTAGACTAGCAA+AGG	0.546123	3.1:-62783384	MS.gene28996:CDS
CTCCTTGGAGGATTCAGCGT+TGG	0.546499	3.1:-62782990	MS.gene28996:CDS
TGGGTCCATATTTATCTGCA+AGG	0.569257	3.1:+62783447	None:intergenic
CAAGCTGTGTATGAATTCCA+AGG	0.581970	3.1:+62782953	None:intergenic
TTTGGAAGGGACTTTACAGA+AGG	0.582009	3.1:-62783065	MS.gene28996:CDS
GAGTACCAGGAACTCCTTGG+AGG	0.582774	3.1:-62783002	MS.gene28996:CDS
TTGCCGCGTAGCGTTTGGAA+GGG	0.583178	3.1:-62783078	MS.gene28996:CDS
ATGCCACACATATCTTTACA+AGG	0.585315	3.1:-62783470	MS.gene28996:CDS
GCTTAGTTCATAGGATTGCA+GGG	0.586887	3.1:-62783160	MS.gene28996:CDS
AAAGATGCTTGATGAGTACC+AGG	0.590727	3.1:-62783015	MS.gene28996:CDS
GCTCTGTCATTGCCCATCAA+GGG	0.600060	3.1:+62782526	None:intergenic
CCTCAAGTAAAATATCTACA+AGG	0.604127	3.1:+62782823	None:intergenic
GAAGGGACTTTACAGAAGGA+GGG	0.607412	3.1:-62783061	MS.gene28996:CDS
CTGTGTATGAATTCCAAGGA+AGG	0.610825	3.1:+62782957	None:intergenic
CTCCTTATAGTGCTTACTGG+AGG	0.613652	3.1:-62783268	MS.gene28996:CDS
TACTTTGCCGAAAACAGTTG+CGG	0.615151	3.1:+62783323	None:intergenic
CACCAACGCTGAATCCTCCA+AGG	0.630295	3.1:+62782988	None:intergenic
ATCTGCTAGACTAGCAAAGG+AGG	0.632774	3.1:-62783381	MS.gene28996:CDS
TTGCCGAAAACAGTTGCGGT+CGG	0.638379	3.1:+62783327	None:intergenic
TTGTAAAGATATGTGTGGCA+TGG	0.648619	3.1:+62783472	None:intergenic
GAGGTACAAGAGAATGACTC+GGG	0.656963	3.1:-62782804	MS.gene28996:CDS
TCAGATAGTGAGTGAACACA+AGG	0.660766	3.1:-62782874	MS.gene28996:CDS
AAGGGACTTTACAGAAGGAG+GGG	0.662971	3.1:-62783060	MS.gene28996:CDS
TGAGGTACAAGAGAATGACT+CGG	0.675658	3.1:-62782805	MS.gene28996:CDS
AGTCCCTTCCAAACGCTACG+CGG	0.682980	3.1:+62783075	None:intergenic
ACTTGGAGAAATCTCAACAG+TGG	0.708528	3.1:-62783411	MS.gene28996:CDS
AGGCCTTGTAAAGATATGTG+TGG	0.758135	3.1:+62783467	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCCTGCAAAAAAAAAAAAAA+AGG	+	chr3.1:62783421-62783440	None:intergenic	20.0%
!!!	TCCTTTTTTTTTTTTTTTGC+AGG	-	chr3.1:62783417-62783436	MS.gene28996:CDS	20.0%
!	AAACCAATACATGGTTATTA+AGG	+	chr3.1:62783307-62783326	None:intergenic	25.0%
!	ATCAATTTGTCCAAGATATT+GGG	-	chr3.1:62782880-62782899	MS.gene28996:CDS	25.0%
!	CCAAGTTGTAAGAAAATTAT+GGG	+	chr3.1:62782577-62782596	None:intergenic	25.0%
!	TATCAATTTGTCCAAGATAT+TGG	-	chr3.1:62782879-62782898	MS.gene28996:CDS	25.0%
!	TATTGCCTTGATATTATCAA+TGG	+	chr3.1:62783238-62783257	None:intergenic	25.0%
!	TCCAAGTTGTAAGAAAATTA+TGG	+	chr3.1:62782578-62782597	None:intergenic	25.0%
!	TTGATATTATCAATGGTAAG+AGG	+	chr3.1:62783231-62783250	None:intergenic	25.0%
!!	TCTTACCATTGATAATATCA+AGG	-	chr3.1:62783230-62783249	MS.gene28996:CDS	25.0%
!!!	CAAATTTTTTTGAAGTGTCT+TGG	+	chr3.1:62783095-62783114	None:intergenic	25.0%
	AAGCCTTAATAACCATGTAT+TGG	-	chr3.1:62783301-62783320	MS.gene28996:CDS	30.0%
	ACAACATTTATTACCCTTGA+TGG	-	chr3.1:62783463-62783482	MS.gene28996:CDS	30.0%
	CAACATTTATTACCCTTGAT+GGG	-	chr3.1:62783464-62783483	MS.gene28996:CDS	30.0%
	CCTCAAGTAAAATATCTACA+AGG	+	chr3.1:62783182-62783201	None:intergenic	30.0%
	TAATATCAAGGCAATAATCC+TGG	-	chr3.1:62783242-62783261	MS.gene28996:CDS	30.0%
!	CAACAAAATAAAGGAGCATA+AGG	-	chr3.1:62783155-62783174	MS.gene28996:CDS	30.0%
!	CCCATAATTTTCTTACAACT+TGG	-	chr3.1:62782574-62782593	MS.gene28996:intron	30.0%
!	CCTTGTAGATATTTTACTTG+AGG	-	chr3.1:62783179-62783198	MS.gene28996:CDS	30.0%
!	GTACCTCTTTTACAATTGTA+CGG	-	chr3.1:62782699-62782718	MS.gene28996:intron	30.0%
	ATCACTTACCAGGGTTATTA+AGG	+	chr3.1:62783280-62783299	None:intergenic	35.0%
	ATCTCTCAGTATGTTGAAAG+TGG	-	chr3.1:62783327-62783346	MS.gene28996:CDS	35.0%
	ATGCCACACATATCTTTACA+AGG	-	chr3.1:62782532-62782551	MS.gene28996:CDS	35.0%
	CAAGGCTTGCAACAAAATAA+AGG	-	chr3.1:62783146-62783165	MS.gene28996:CDS	35.0%
	CAGTATGTTGAAAGTGGATA+AGG	-	chr3.1:62783333-62783352	MS.gene28996:CDS	35.0%
	CTGAGAGATAAACCAATACA+TGG	+	chr3.1:62783316-62783335	None:intergenic	35.0%
	TGCATAAAGTCCCAATATCT+TGG	+	chr3.1:62782893-62782912	None:intergenic	35.0%
	TGTCCGTACAATTGTAAAAG+AGG	+	chr3.1:62782705-62782724	None:intergenic	35.0%
!	AAGTTGCTAGCTTAGTTCAT+AGG	-	chr3.1:62782833-62782852	MS.gene28996:CDS	35.0%
!	ACTGTATGAGTTTACCCTTT+TGG	+	chr3.1:62782797-62782816	None:intergenic	35.0%
!!!	TGGTGATTTTTTTCCTTCCT+TGG	-	chr3.1:62783032-62783051	MS.gene28996:CDS	35.0%
	AAAGATGCTTGATGAGTACC+AGG	-	chr3.1:62782987-62783006	MS.gene28996:CDS	40.0%
	ACTTGGAGAAATCTCAACAG+TGG	-	chr3.1:62782591-62782610	MS.gene28996:intron	40.0%
	AGCTTAGTTCATAGGATTGC+AGG	-	chr3.1:62782841-62782860	MS.gene28996:CDS	40.0%
	CAAGCTGTGTATGAATTCCA+AGG	+	chr3.1:62783052-62783071	None:intergenic	40.0%
	CAAGGCCTTGCAGATAAATA+TGG	-	chr3.1:62782550-62782569	MS.gene28996:CDS	40.0%
	CTGTGTATGAATTCCAAGGA+AGG	+	chr3.1:62783048-62783067	None:intergenic	40.0%
	GAATTCATACACAGCTTGAC+AGG	-	chr3.1:62783054-62783073	MS.gene28996:CDS	40.0%
	GCTTAGTTCATAGGATTGCA+GGG	-	chr3.1:62782842-62782861	MS.gene28996:CDS	40.0%
	GGAGGGGAGAGTAAAAAATA+TGG	-	chr3.1:62782958-62782977	MS.gene28996:CDS	40.0%
	TAAGGCTTCATCACTTACCA+GGG	+	chr3.1:62783262-62783281	None:intergenic	40.0%
	TACTTTGCCGAAAACAGTTG+CGG	+	chr3.1:62782682-62782701	None:intergenic	40.0%
	TCAGATAGTGAGTGAACACA+AGG	-	chr3.1:62783128-62783147	MS.gene28996:CDS	40.0%
	TGAGCTTCTAAGTGCCAAAA+GGG	-	chr3.1:62782780-62782799	MS.gene28996:CDS	40.0%
	TGAGGTACAAGAGAATGACT+CGG	-	chr3.1:62783197-62783216	MS.gene28996:CDS	40.0%
	TGATGAAGCCTTAATAACCC+TGG	-	chr3.1:62783269-62783288	MS.gene28996:CDS	40.0%
	TGGGTCCATATTTATCTGCA+AGG	+	chr3.1:62782558-62782577	None:intergenic	40.0%
	TTAAGGCTTCATCACTTACC+AGG	+	chr3.1:62783263-62783282	None:intergenic	40.0%
	TTCATCTGCTAGACTAGCAA+AGG	-	chr3.1:62782618-62782637	MS.gene28996:intron	40.0%
	TTGAGCTTCTAAGTGCCAAA+AGG	-	chr3.1:62782779-62782798	MS.gene28996:CDS	40.0%
	TTTGGAAGGGACTTTACAGA+AGG	-	chr3.1:62782937-62782956	MS.gene28996:CDS	40.0%
!	AGGCCTTGTAAAGATATGTG+TGG	+	chr3.1:62782538-62782557	None:intergenic	40.0%
!	GGTACTCATCAAGCATCTTT+TGG	+	chr3.1:62782987-62783006	None:intergenic	40.0%
	AAGGGACTTTACAGAAGGAG+GGG	-	chr3.1:62782942-62782961	MS.gene28996:CDS	45.0%
	ATCTGCTAGACTAGCAAAGG+AGG	-	chr3.1:62782621-62782640	MS.gene28996:intron	45.0%
	CTCCTTATAGTGCTTACTGG+AGG	-	chr3.1:62782734-62782753	MS.gene28996:intron	45.0%
	GAAGGGACTTTACAGAAGGA+GGG	-	chr3.1:62782941-62782960	MS.gene28996:CDS	45.0%
	GAGGTACAAGAGAATGACTC+GGG	-	chr3.1:62783198-62783217	MS.gene28996:CDS	45.0%
	TCGCTCCTTATAGTGCTTAC+TGG	-	chr3.1:62782731-62782750	MS.gene28996:intron	45.0%
	TGCCTCCAGTAAGCACTATA+AGG	+	chr3.1:62782739-62782758	None:intergenic	45.0%
!	TTGCAGGATATGTTTGCTGC+TGG	-	chr3.1:62783433-62783452	MS.gene28996:CDS	45.0%
!!	AGGATTGCAGGGTCTTATTC+AGG	-	chr3.1:62782853-62782872	MS.gene28996:CDS	45.0%
	GATGAGTACCAGGAACTCCT+TGG	-	chr3.1:62782997-62783016	MS.gene28996:CDS	50.0%
	GGAAGGGACTTTACAGAAGG+AGG	-	chr3.1:62782940-62782959	MS.gene28996:CDS	50.0%
	TGAATCCTCCAAGGAGTTCC+TGG	+	chr3.1:62783008-62783027	None:intergenic	50.0%
	TTGCCGAAAACAGTTGCGGT+CGG	+	chr3.1:62782678-62782697	None:intergenic	50.0%
!	AAGCCGACCGCAACTGTTTT+CGG	-	chr3.1:62782672-62782691	MS.gene28996:intron	50.0%
	AGTCCCTTCCAAACGCTACG+CGG	+	chr3.1:62782930-62782949	None:intergenic	55.0%
	CACCAACGCTGAATCCTCCA+AGG	+	chr3.1:62783017-62783036	None:intergenic	55.0%
	CTCCTTGGAGGATTCAGCGT+TGG	-	chr3.1:62783012-62783031	MS.gene28996:CDS	55.0%
	GAGTACCAGGAACTCCTTGG+AGG	-	chr3.1:62783000-62783019	MS.gene28996:CDS	55.0%
	GTTGTTTGCCGCGTAGCGTT+TGG	-	chr3.1:62782919-62782938	MS.gene28996:CDS	55.0%
	TTGCCGCGTAGCGTTTGGAA+GGG	-	chr3.1:62782924-62782943	MS.gene28996:CDS	55.0%
	TTTGCCGCGTAGCGTTTGGA+AGG	-	chr3.1:62782923-62782942	MS.gene28996:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	62782532	62783492	62782532	ID=MS.gene28996
chr3.1	mRNA	62782532	62783492	62782532	ID=MS.gene28996.t1;Parent=MS.gene28996
chr3.1	exon	62782761	62783492	62782761	ID=MS.gene28996.t1.exon1;Parent=MS.gene28996.t1
chr3.1	CDS	62782761	62783492	62782761	ID=cds.MS.gene28996.t1;Parent=MS.gene28996.t1
chr3.1	exon	62782532	62782585	62782532	ID=MS.gene28996.t1.exon2;Parent=MS.gene28996.t1
chr3.1	CDS	62782532	62782585	62782532	ID=cds.MS.gene28996.t1;Parent=MS.gene28996.t1

Gene Sequence

>MS.gene28996

ATGCCACACATATCTTTACAAGGCCTTGCAGATAAATATGGACCCATAATTTTCTTACAACTTGGAGAAATCTCAACAGTGGTTGTTTCATCTGCTAGACTAGCAAAGGAGGTGTTGAAAACACATGATCTTGCACTCGCAAGCCGACCGCAACTGTTTTCGGCAAAGTACCTCTTTTACAATTGTACGGACATCGCTTTCGCTCCTTATAGTGCTTACTGGAGGCATGTGAGAAAAATTTGCATACTTGAGCTTCTAAGTGCCAAAAGGGTAAACTCATACAGTGCTGTTAGAGAAGAAGAAGTTGCTAGCTTAGTTCATAGGATTGCAGGGTCTTATTCAGGAACTATCAATTTGTCCAAGATATTGGGACTTTATGCAAATAATGTTGTTTGCCGCGTAGCGTTTGGAAGGGACTTTACAGAAGGAGGGGAGAGTAAAAAATATGGTTTCCAAAAGATGCTTGATGAGTACCAGGAACTCCTTGGAGGATTCAGCGTTGGTGATTTTTTTCCTTCCTTGGAATTCATACACAGCTTGACAGGTATGAAAGCAAGACTCCAAGACACTTCAAAAAAATTTGATCAACTCATTGATCAGATAGTGAGTGAACACAAGGCTTGCAACAAAATAAAGGAGCATAAGGACCTTGTAGATATTTTACTTGAGGTACAAGAGAATGACTCGGGTGAGATGCCTCTTACCATTGATAATATCAAGGCAATAATCCTGGTAAGTGATGAAGCCTTAATAACCCTGGTAAGTGATGAAGCCTTAATAACCATGTATTGGTTTATCTCTCAGTATGTTGAAAGTGGATAAGGCATGAGATATTATTCACTTTGCTGAATTGACTAATGACATTTTGACAATACTTTGTTTCTCTCCTTTTTTTTTTTTTTTGCAGGATATGTTTGCTGCTGGAACTGATACAACATTTATTACCCTTGATGGGCAATGA

Protein sequence

>MS.gene28996.t1

MPHISLQGLADKYGPIIFLQLGEISTVVVSSARLAKEVLKTHDLALASRPQLFSAKYLFYNCTDIAFAPYSAYWRHVRKICILELLSAKRVNSYSAVREEEVASLVHRIAGSYSGTINLSKILGLYANNVVCRVAFGRDFTEGGESKKYGFQKMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKARLQDTSKKFDQLIDQIVSEHKACNKIKEHKDLVDILLEVQENDSGEMPLTIDNIKAIILDMFAAGTDTTFITLDGQ