AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052421


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052421.t1 MTR_6g086600 99.123 456 4 0 3 458 71 526 0.0 935
MS.gene052421.t1 MTR_6g086600 99.123 456 4 0 3 458 62 517 0.0 933
MS.gene052421.t1 MTR_1g070360 39.759 249 143 5 108 351 21 267 7.50e-55 184
MS.gene052421.t1 MTR_1g016110 40.000 180 103 3 105 279 8 187 1.08e-27 112
MS.gene052421.t1 MTR_1g019620 40.000 180 103 3 105 279 55 234 1.84e-27 112
MS.gene052421.t1 MTR_1g016110 40.000 180 103 3 105 279 55 234 2.08e-27 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052421.t1 AT3G24430 88.367 447 52 0 11 457 78 524 0.0 827
MS.gene052421.t1 AT4G19540 38.996 259 151 5 105 358 39 295 2.08e-53 182
MS.gene052421.t1 AT5G50960 41.667 180 100 4 105 279 55 234 1.25e-33 130

Find 110 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTATACTTTGGCTGATA+TGG 0.137501 6.1:-74740032 MS.gene052421:CDS
CAACACATACTCCTAGATTT+TGG 0.188730 6.1:+74738132 None:intergenic
ATATTTGATGCTGATATTTA+TGG 0.193240 6.1:-74739995 MS.gene052421:CDS
ATGCGCGGCCCTATGGTTTC+TGG 0.254274 6.1:-74739755 MS.gene052421:CDS
GGAGTCAAGTTGGTTTCTTT+TGG 0.256137 6.1:-74739803 MS.gene052421:CDS
AGACATACAGTCGGTCTAAT+AGG 0.268791 6.1:+74738347 None:intergenic
CCCATTGGCCGAATTTCTTC+AGG 0.291086 6.1:+74737370 None:intergenic
TTGTCACAGCTATCCGCTTC+TGG 0.295162 6.1:-74738212 MS.gene052421:intron
TATCCATTTGGTAGAGGTTC+AGG 0.312034 6.1:-74738541 MS.gene052421:CDS
TGAGGATCTGCCACCACTTC+AGG 0.313787 6.1:+74738176 None:intergenic
ACAATTACAGCAGCAGTTAA+TGG 0.320244 6.1:+74738820 None:intergenic
TCTTCAGGTTCAATGTAATC+AGG 0.349940 6.1:+74737385 None:intergenic
CATGTATTCAGTTGGAATTA+TGG 0.354832 6.1:+74739826 None:intergenic
TGGTCCAAGCTTACCAACTA+TGG 0.359534 6.1:-74739975 MS.gene052421:CDS
AGTAAACCTTGCTTATACTT+TGG 0.360089 6.1:-74740041 MS.gene052421:CDS
GCTTATACTTTGGCTGATAT+GGG 0.360827 6.1:-74740031 MS.gene052421:CDS
TTGCAGGTTGTTCAGCAGTT+TGG 0.361065 6.1:-74738392 MS.gene052421:intron
TCATTCCGTCTCACTGTTGC+AGG 0.363783 6.1:+74737541 None:intergenic
ACAATATCTGTTCCAAAGTC+TGG 0.368544 6.1:+74740823 None:intergenic
TGCAATTATGCGCGGCCCTA+TGG 0.383680 6.1:-74739762 MS.gene052421:CDS
CAATTACAGCAGCAGTTAAT+GGG 0.383745 6.1:+74738821 None:intergenic
ATTGTCTGAAGTTGATCATA+AGG 0.398569 6.1:+74736646 None:intergenic
ATCGACATGCCTCCGGGAAC+AGG 0.402030 6.1:-74739346 MS.gene052421:CDS
AAGAATTCTTCATCTGAATC+TGG 0.406817 6.1:+74737571 None:intergenic
CAGATCATTGATCCAGACTT+TGG 0.418548 6.1:-74740835 MS.gene052421:CDS
AGTTGAATGTCTCCTGTTCC+CGG 0.419810 6.1:+74739334 None:intergenic
ACATTGAACCTGAAGAAATT+CGG 0.423333 6.1:-74737378 MS.gene052421:CDS
AGGTGGTGGCAGTGCTCCCT+TGG 0.423999 6.1:-74740370 MS.gene052421:CDS
GAGGAGATTCACCTTGCAAC+TGG 0.430371 6.1:+74740244 None:intergenic
TTCAATGTAATCAGGAATAT+CGG 0.430600 6.1:+74737393 None:intergenic
TTGAATTGCAGGTGTCGTTT+CGG 0.435004 6.1:-74740679 MS.gene052421:intron
GGAAATTCCTCGGTATCAAC+TGG 0.438796 6.1:-74740892 MS.gene052421:CDS
TCCAAGATATTCCAAAATCT+AGG 0.444913 6.1:-74738143 MS.gene052421:CDS
GACATACAGTCGGTCTAATA+GGG 0.445514 6.1:+74738348 None:intergenic
CCTTGTTATCGACATGCCTC+CGG 0.447834 6.1:-74739353 MS.gene052421:CDS
TGGTAGAGGTTCAGGATCTC+AGG 0.450907 6.1:-74738533 MS.gene052421:intron
GGAAAATCGAATATTAGAAA+TGG 0.456568 6.1:-74739945 MS.gene052421:intron
CATAATTCCAACTGAATACA+TGG 0.456907 6.1:-74739825 MS.gene052421:CDS
CATTCAACTCACTTTATGCC+AGG 0.470185 6.1:-74739320 MS.gene052421:intron
TCGATGTTGCAAAAGGAGTT+CGG 0.470587 6.1:-74738771 MS.gene052421:CDS
CCTGAAGAAATTCGGCCAAT+GGG 0.471972 6.1:-74737370 MS.gene052421:CDS
CATATGACAGTTTGAGCAGC+AGG 0.476211 6.1:-74740399 MS.gene052421:intron
CTATCCGCTTCTGGAGATAG+TGG 0.480474 6.1:-74738203 MS.gene052421:CDS
GAGACCATAGTTGGTAAGCT+TGG 0.482760 6.1:+74739971 None:intergenic
CTTGTTATCGACATGCCTCC+GGG 0.484187 6.1:-74739352 MS.gene052421:CDS
GGAAGTTGCTCTGCGAATAA+CGG 0.492258 6.1:+74740305 None:intergenic
GTTTGAGCAGCAGGCAAATG+AGG 0.503635 6.1:-74740390 MS.gene052421:CDS
TGAATACATGGGAGTCAAGT+TGG 0.507061 6.1:-74739813 MS.gene052421:CDS
TCATTTACCACGTCCTTGAT+CGG 0.507285 6.1:+74740632 None:intergenic
CAGACAATGGAACGGTTAGT+TGG 0.507492 6.1:-74736631 MS.gene052421:CDS
GATCCTGAACCTCTACCAAA+TGG 0.508732 6.1:+74738538 None:intergenic
ATGGCCTGATGGGTTTAGTC+AGG 0.515668 6.1:-74737326 MS.gene052421:intron
ATCAGGCCATGTTATTGAAA+CGG 0.517279 6.1:+74737339 None:intergenic
TTCGCAGAGCAACTTCCAGC+AGG 0.518320 6.1:-74740299 MS.gene052421:CDS
TCGTTCATCGATGTTGCAAA+AGG 0.518766 6.1:-74738778 MS.gene052421:CDS
TTGACTCCCATGTATTCAGT+TGG 0.519307 6.1:+74739818 None:intergenic
TTTCAATAACATGGCCTGAT+GGG 0.520664 6.1:-74737336 MS.gene052421:CDS
GAAATCGTCTGTAAACCTGC+TGG 0.523125 6.1:+74740284 None:intergenic
GTTTCAATAACATGGCCTGA+TGG 0.525709 6.1:-74737337 MS.gene052421:CDS
GGTGGTGGCAGTGCTCCCTT+GGG 0.525748 6.1:-74740369 MS.gene052421:CDS
GCAGGAATAGAATACCTTGT+TGG 0.530146 6.1:+74738087 None:intergenic
AGATACTATCCATTTGGTAG+AGG 0.534523 6.1:-74738547 MS.gene052421:CDS
TTTAAACAGGATGAATGGAC+GGG 0.535044 6.1:-74737436 MS.gene052421:intron
TACACCAGCATGTCCGATCA+AGG 0.535639 6.1:-74740645 MS.gene052421:CDS
CTTACCAACTATGGTCTCTC+CGG 0.539146 6.1:-74739966 MS.gene052421:CDS
GACCTACGATAAATCAGTAA+AGG 0.541724 6.1:-74737611 MS.gene052421:CDS
ACCTGAAGAAATTCGGCCAA+TGG 0.544677 6.1:-74737371 MS.gene052421:CDS
GAAACGGCATAATTTCCCAT+TGG 0.545905 6.1:+74737355 None:intergenic
CGCTTTCAACACGTCATCCT+CGG 0.552280 6.1:+74740864 None:intergenic
ACTCGGTAGTAGTGAGAAGT+TGG 0.557427 6.1:+74739723 None:intergenic
GCTGATATGGGTGCTAGAGT+TGG 0.558279 6.1:-74740019 MS.gene052421:CDS
TTGCAGATCGATAAAGCTCT+AGG 0.558415 6.1:-74740778 MS.gene052421:CDS
ATTACCTGACTAAACCCATC+AGG 0.562451 6.1:+74737322 None:intergenic
ATATGCAGTTGGAAATTCCT+CGG 0.567670 6.1:-74740902 MS.gene052421:intron
GGAACAGATATTGTTACTTG+CGG 0.573860 6.1:-74740814 MS.gene052421:CDS
CAACAGTGAGACGGAATGAT+CGG 0.575612 6.1:-74737537 MS.gene052421:CDS
ACATTGACATTCTTGACCCA+AGG 0.579491 6.1:+74740353 None:intergenic
GCAGCAGGCAAATGAGGTGG+TGG 0.582151 6.1:-74740384 MS.gene052421:CDS
AGCATGTCCGATCAAGGACG+TGG 0.585341 6.1:-74740639 MS.gene052421:intron
ACGTCCTTGATCGGACATGC+TGG 0.585612 6.1:+74740641 None:intergenic
CCGGAGGCATGTCGATAACA+AGG 0.586363 6.1:+74739353 None:intergenic
TAGTGACTCCAGAAACCATA+GGG 0.591488 6.1:+74739747 None:intergenic
TGCATCCTGCAACAGTGAGA+CGG 0.597022 6.1:-74737546 MS.gene052421:CDS
ATTATGCCGTTTCAATAACA+TGG 0.597601 6.1:-74737345 MS.gene052421:CDS
TGCCTTTACTGATTTATCGT+AGG 0.597898 6.1:+74737609 None:intergenic
TTATGATCAACTTCAGACAA+TGG 0.600201 6.1:-74736644 MS.gene052421:CDS
TATCGCTGTATCCAGTTGCA+AGG 0.603418 6.1:-74740255 MS.gene052421:intron
TATCAGCCAAAGTATAAGCA+AGG 0.626958 6.1:+74740035 None:intergenic
TAGTGGAATGCCTGAAGTGG+TGG 0.627513 6.1:-74738186 MS.gene052421:CDS
CATTCCACTATCTCCAGAAG+CGG 0.629862 6.1:+74738199 None:intergenic
TTAAACAGGATGAATGGACG+GGG 0.643427 6.1:-74737435 MS.gene052421:intron
GGCTGTTCCAGTTGATACCG+AGG 0.645759 6.1:+74740885 None:intergenic
TTAGTGACTCCAGAAACCAT+AGG 0.646928 6.1:+74739746 None:intergenic
TGTGCTAAAATACGCCAACA+AGG 0.648845 6.1:-74738101 MS.gene052421:intron
GGTATCAACTGGAACAGCCG+AGG 0.653632 6.1:-74740881 MS.gene052421:CDS
CATTGACATTCTTGACCCAA+GGG 0.654050 6.1:+74740354 None:intergenic
TGATCGGTCTGCTCAGAGTG+TGG 0.657675 6.1:-74737521 MS.gene052421:intron
TGAGCAGCAGGCAAATGAGG+TGG 0.665630 6.1:-74740387 MS.gene052421:CDS
ATCAACTTCAGACAATGGAA+CGG 0.672374 6.1:-74736639 MS.gene052421:CDS
CAAGGACGTGCAATTATGCG+CGG 0.675432 6.1:-74739770 MS.gene052421:CDS
ATCTTGGAAACATCGCCTTG+AGG 0.676959 6.1:+74738158 None:intergenic
ATAATTCCAACTGAATACAT+GGG 0.686201 6.1:-74739824 MS.gene052421:CDS
TTCTCGACAACAGCTACACA+AGG 0.689907 6.1:+74738598 None:intergenic
GATCGATAAAGCTCTAGGAG+AGG 0.690504 6.1:-74740773 MS.gene052421:intron
AGATAGTGGAATGCCTGAAG+TGG 0.694339 6.1:-74738189 MS.gene052421:CDS
ATAGGGAGATCAAATAGATG+CGG 0.696235 6.1:+74738365 None:intergenic
GAAGTGGTGGCAGATCCTCA+AGG 0.698028 6.1:-74738173 MS.gene052421:CDS
TAAACAGGATGAATGGACGG+GGG 0.700512 6.1:-74737434 MS.gene052421:intron
TGAATGTCTCCTGTTCCCGG+AGG 0.729128 6.1:+74739337 None:intergenic
AACTTCTCACTACTACCGAG+TGG 0.751912 6.1:-74739721 MS.gene052421:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGATTATTATATAAATG+TGG + chr6.1:74738175-74738194 None:intergenic 10.0%
!! TTTATGTTATTCAAATTTAT+TGG - chr6.1:74738064-74738083 MS.gene052421:intron 10.0%
!!! GTTTTTAAATGTATAATATA+GGG - chr6.1:74737732-74737751 MS.gene052421:intron 10.0%
!!! TGTTTTTAAATGTATAATAT+AGG - chr6.1:74737731-74737750 MS.gene052421:intron 10.0%
!! AAAGTGAAAAAATTTGTATT+CGG + chr6.1:74739925-74739944 None:intergenic 15.0%
!! ATTATACATTTAAAAACACA+TGG + chr6.1:74737729-74737748 None:intergenic 15.0%
!! GTAATTAGATTAACTATTTA+TGG + chr6.1:74737486-74737505 None:intergenic 15.0%
!! TGTCAAAAAAAATATAAATG+TGG + chr6.1:74738145-74738164 None:intergenic 15.0%
!!! GCAATTAATTTTTTAATAGT+CGG - chr6.1:74740853-74740872 MS.gene052421:CDS 15.0%
!!! TTATTTTGTGTTTATGTAAA+AGG - chr6.1:74739011-74739030 MS.gene052421:intron 15.0%
!! AAACATTCATTTCTTTATCA+TGG + chr6.1:74737142-74737161 None:intergenic 20.0%
!! AAAGTTCCTTCTATTAAAAA+CGG - chr6.1:74740708-74740727 MS.gene052421:intron 20.0%
!! AGTTAAAGTAATTACACTAT+AGG + chr6.1:74738748-74738767 None:intergenic 20.0%
!! ATATATACTTAATGGAAAAG+CGG + chr6.1:74739763-74739782 None:intergenic 20.0%
!! ATATTTGATGCTGATATTTA+TGG - chr6.1:74737639-74737658 MS.gene052421:intron 20.0%
!! GTCAAAAATAAAAATTTGCA+GGG - chr6.1:74737546-74737565 MS.gene052421:CDS 20.0%
!! TAAACTCATTACATATAGAA+GGG - chr6.1:74737085-74737104 MS.gene052421:intron 20.0%
!! TCAAAAATAAAAATTTGCAG+GGG - chr6.1:74737547-74737566 MS.gene052421:CDS 20.0%
!! TGTCAAAAATAAAAATTTGC+AGG - chr6.1:74737545-74737564 MS.gene052421:CDS 20.0%
!! TTTCTATTATGCAATATTCA+GGG + chr6.1:74739809-74739828 None:intergenic 20.0%
!!! AAGCTAACTTTATTTTAAAC+AGG - chr6.1:74740185-74740204 MS.gene052421:intron 20.0%
!!! AATACAATTTTTGTATCATC+TGG + chr6.1:74740644-74740663 None:intergenic 20.0%
!!! ACTTTAAAACTAGTTACATT+CGG + chr6.1:74739605-74739624 None:intergenic 20.0%
!!! AGTTTTGCATATATACTTAA+TGG + chr6.1:74739771-74739790 None:intergenic 20.0%
!!! ATTTCTAATATTCGATTTTC+CGG + chr6.1:74737690-74737709 None:intergenic 20.0%
!!! TAATTTAAAAAGCATCAAGT+AGG + chr6.1:74738121-74738140 None:intergenic 20.0%
!!! TTAAATGACATGATTTGTTA+AGG + chr6.1:74738013-74738032 None:intergenic 20.0%
!!! TTTAAAGCTTTCTTTTTCAA+TGG + chr6.1:74740362-74740381 None:intergenic 20.0%
!!! TTTATTTTAAACAGGATGAA+TGG - chr6.1:74740193-74740212 MS.gene052421:intron 20.0%
!!! TTTTCTATTATGCAATATTC+AGG + chr6.1:74739810-74739829 None:intergenic 20.0%
! AAAAATAAAAATTTGCAGGG+GGG - chr6.1:74737549-74737568 MS.gene052421:CDS 25.0%
! AATATGACCAATATATGATG+AGG + chr6.1:74737412-74737431 None:intergenic 25.0%
! ATAATTCCAACTGAATACAT+GGG - chr6.1:74737810-74737829 MS.gene052421:intron 25.0%
! ATTGCATAATAGAAAAACTG+CGG - chr6.1:74739814-74739833 MS.gene052421:CDS 25.0%
! CAAAAATAAAAATTTGCAGG+GGG - chr6.1:74737548-74737567 MS.gene052421:CDS 25.0%
! GGAAAATCGAATATTAGAAA+TGG - chr6.1:74737689-74737708 MS.gene052421:intron 25.0%
! GTAAACTCATTACATATAGA+AGG - chr6.1:74737084-74737103 MS.gene052421:intron 25.0%
! TTCAATGTAATCAGGAATAT+CGG + chr6.1:74740244-74740263 None:intergenic 25.0%
!! ATTTGGTTTACAAAATGTAG+GGG - chr6.1:74738246-74738265 MS.gene052421:intron 25.0%
!! GACACAAAAAATGTTTCTTT+TGG - chr6.1:74738572-74738591 MS.gene052421:CDS 25.0%
!! GATTTGGTTTACAAAATGTA+GGG - chr6.1:74738245-74738264 MS.gene052421:intron 25.0%
!! TGGTTTCATAACTGTATTTT+CGG - chr6.1:74740590-74740609 MS.gene052421:intron 25.0%
!! TGTTTTCTTATATATGCAGT+TGG - chr6.1:74736721-74736740 MS.gene052421:intron 25.0%
!!! CAAAAATTGTATTTTTTCCG+CGG - chr6.1:74740651-74740670 MS.gene052421:CDS 25.0%
!!! TGATTTGGTTTACAAAATGT+AGG - chr6.1:74738244-74738263 MS.gene052421:intron 25.0%
AAAACTTTGGGCTGAAATAT+GGG - chr6.1:74738695-74738714 MS.gene052421:intron 30.0%
AAGAATTCTTCATCTGAATC+TGG + chr6.1:74740066-74740085 None:intergenic 30.0%
AAGTTGAACCTAAAGCAAAA+TGG + chr6.1:74740791-74740810 None:intergenic 30.0%
AATTACATGAAACTCAAGAC+TGG + chr6.1:74737187-74737206 None:intergenic 30.0%
AATTGTCTCGGTTAGAAATA+TGG - chr6.1:74740408-74740427 MS.gene052421:intron 30.0%
AATTTGTATTCGGATGCATT+AGG + chr6.1:74739915-74739934 None:intergenic 30.0%
ACATTGAACCTGAAGAAATT+CGG - chr6.1:74740256-74740275 MS.gene052421:CDS 30.0%
AGATATGCTATGCATAGAAT+AGG - chr6.1:74737965-74737984 MS.gene052421:intron 30.0%
AGCACATATATTAGGTTTGA+AGG + chr6.1:74740464-74740483 None:intergenic 30.0%
AGTAAACCTTGCTTATACTT+TGG - chr6.1:74737593-74737612 MS.gene052421:CDS 30.0%
ATGAGACGAAATGTAAATCA+TGG + chr6.1:74737508-74737527 None:intergenic 30.0%
CATAATTCCAACTGAATACA+TGG - chr6.1:74737809-74737828 MS.gene052421:intron 30.0%
CATATCAAGCATAACCTATT+AGG + chr6.1:74738218-74738237 None:intergenic 30.0%
CATGTATTCAGTTGGAATTA+TGG + chr6.1:74737811-74737830 None:intergenic 30.0%
CATTAGCATATCAATTGTCT+CGG - chr6.1:74740396-74740415 MS.gene052421:intron 30.0%
CTTGAGTTTCATGTAATTCT+GGG - chr6.1:74737189-74737208 MS.gene052421:intron 30.0%
GAATAGTATCAAGTATGTGT+TGG + chr6.1:74738971-74738990 None:intergenic 30.0%
GAGAGAAGAGAATAAACTAA+AGG + chr6.1:74739340-74739359 None:intergenic 30.0%
GATATGCTATGCATAGAATA+GGG - chr6.1:74737966-74737985 MS.gene052421:intron 30.0%
GGAAAAAGATACTATCCATT+TGG - chr6.1:74739081-74739100 MS.gene052421:intron 30.0%
GTAGTTCAATACATACTCTA+GGG + chr6.1:74738099-74738118 None:intergenic 30.0%
TCACACGTAAAATTTGATTG+CGG + chr6.1:74738723-74738742 None:intergenic 30.0%
TCCAAGATATTCCAAAATCT+AGG - chr6.1:74739491-74739510 MS.gene052421:intron 30.0%
TCTTGAGTTTCATGTAATTC+TGG - chr6.1:74737188-74737207 MS.gene052421:intron 30.0%
TGAATCTCCTCATCATATAT+TGG - chr6.1:74737402-74737421 MS.gene052421:CDS 30.0%
TGCAATGTGAAACAAACTAA+AGG + chr6.1:74738355-74738374 None:intergenic 30.0%
TGTGAAACAAACTAAAGGAT+TGG + chr6.1:74738350-74738369 None:intergenic 30.0%
TTATGATCAACTTCAGACAA+TGG - chr6.1:74740990-74741009 MS.gene052421:intron 30.0%
TTTGGTCAAGCACATATATT+AGG + chr6.1:74740472-74740491 None:intergenic 30.0%
! AAAGTTAGCTTCAAATGAGA+TGG + chr6.1:74740176-74740195 None:intergenic 30.0%
! ATTATGCCGTTTCAATAACA+TGG - chr6.1:74740289-74740308 MS.gene052421:CDS 30.0%
! ATTGTCTGAAGTTGATCATA+AGG + chr6.1:74740991-74741010 None:intergenic 30.0%
! CAAAATCACTGCTCAATTTT+CGG - chr6.1:74739642-74739661 MS.gene052421:intron 30.0%
! CTTGATATGTAGTCTTGATT+TGG - chr6.1:74738229-74738248 MS.gene052421:intron 30.0%
! TAAGTCGTTTGCGATAATTT+TGG - chr6.1:74737431-74737450 MS.gene052421:intron 30.0%
! TGGATAGTATCTTTTTCCAT+CGG + chr6.1:74739079-74739098 None:intergenic 30.0%
! TTTATCCAGAAGTATACTTC+TGG - chr6.1:74738547-74738566 MS.gene052421:CDS 30.0%
! TTTTAAACAGGATGAATGGA+CGG - chr6.1:74740197-74740216 MS.gene052421:intron 30.0%
!! AAGTTTTTGCTTTGAATTGC+AGG - chr6.1:74736944-74736963 MS.gene052421:intron 30.0%
!!! ACATTGCATTTTAACTGTTG+TGG - chr6.1:74738367-74738386 MS.gene052421:CDS 30.0%
!!! TCCTAGATTTTGGAATATCT+TGG + chr6.1:74739495-74739514 None:intergenic 30.0%
!!! TTTAGGTTCAACTTTTTTGC+CGG - chr6.1:74740797-74740816 MS.gene052421:CDS 30.0%
AATCAAACGCCTCAAACTTT+CGG - chr6.1:74736890-74736909 MS.gene052421:intron 35.0%
ACAATATCTGTTCCAAAGTC+TGG + chr6.1:74736814-74736833 None:intergenic 35.0%
ACAATTACAGCAGCAGTTAA+TGG + chr6.1:74738817-74738836 None:intergenic 35.0%
AGATACTATCCATTTGGTAG+AGG - chr6.1:74739087-74739106 MS.gene052421:intron 35.0%
AGGCCTAAAGCAAACTTTAA+AGG - chr6.1:74740764-74740783 MS.gene052421:intron 35.0%
AGTTCATCCCTTTATTGAAC+AGG + chr6.1:74740537-74740556 None:intergenic 35.0%
ATAGGGAGATCAAATAGATG+CGG + chr6.1:74739272-74739291 None:intergenic 35.0%
ATATGCAGTTGGAAATTCCT+CGG - chr6.1:74736732-74736751 MS.gene052421:intron 35.0%
ATCAACTTCAGACAATGGAA+CGG - chr6.1:74740995-74741014 MS.gene052421:intron 35.0%
ATCAGGCCATGTTATTGAAA+CGG + chr6.1:74740298-74740317 None:intergenic 35.0%
CAATTACAGCAGCAGTTAAT+GGG + chr6.1:74738816-74738835 None:intergenic 35.0%
CATGTACCCTGTTCAATAAA+GGG - chr6.1:74740527-74740546 MS.gene052421:intron 35.0%
CCAAACTTCAGAACATCAAA+TGG - chr6.1:74740487-74740506 MS.gene052421:intron 35.0%
GAAAACTTTGGGCTGAAATA+TGG - chr6.1:74738694-74738713 MS.gene052421:intron 35.0%
GACCTACGATAAATCAGTAA+AGG - chr6.1:74740023-74740042 MS.gene052421:CDS 35.0%
GATTGTTCGATCATATTTGC+AGG - chr6.1:74739226-74739245 MS.gene052421:intron 35.0%
GCTTATACTTTGGCTGATAT+GGG - chr6.1:74737603-74737622 MS.gene052421:CDS 35.0%
GGCCTAAAGCAAACTTTAAA+GGG - chr6.1:74740765-74740784 MS.gene052421:intron 35.0%
GGTAGTTCAATACATACTCT+AGG + chr6.1:74738100-74738119 None:intergenic 35.0%
GTAATGTACACACATCAGAT+TGG - chr6.1:74740330-74740349 MS.gene052421:CDS 35.0%
GTTCATCCCTTTATTGAACA+GGG + chr6.1:74740536-74740555 None:intergenic 35.0%
TAAGCCAGACTGAAAACTTT+GGG - chr6.1:74738683-74738702 MS.gene052421:intron 35.0%
TATCAGCCAAAGTATAAGCA+AGG + chr6.1:74737602-74737621 None:intergenic 35.0%
TCCTTTCCAGAAAACCTAAT+AGG - chr6.1:74738201-74738220 MS.gene052421:CDS 35.0%
TCTCGGTTAGAAATATGGTT+TGG - chr6.1:74740413-74740432 MS.gene052421:intron 35.0%
TGCTTATACTTTGGCTGATA+TGG - chr6.1:74737602-74737621 MS.gene052421:CDS 35.0%
TGTGTGATGTCTTAGAAATG+CGG + chr6.1:74740570-74740589 None:intergenic 35.0%
TTAAGCCAGACTGAAAACTT+TGG - chr6.1:74738682-74738701 MS.gene052421:intron 35.0%
TTTAAACAGGATGAATGGAC+GGG - chr6.1:74740198-74740217 MS.gene052421:intron 35.0%
TTTCAATAACATGGCCTGAT+GGG - chr6.1:74740298-74740317 MS.gene052421:CDS 35.0%
TTTCAGAAATGCATACCACT+CGG + chr6.1:74737931-74737950 None:intergenic 35.0%
! AGGATTGGTAAGTTATAACC+TGG + chr6.1:74738335-74738354 None:intergenic 35.0%
! ATCATCTGGAAGTACACTTT+CGG + chr6.1:74740630-74740649 None:intergenic 35.0%
! CAACACATACTCCTAGATTT+TGG + chr6.1:74739505-74739524 None:intergenic 35.0%
! GCATAACCTATTAGGTTTTC+TGG + chr6.1:74738210-74738229 None:intergenic 35.0%
! GGAACAGATATTGTTACTTG+CGG - chr6.1:74736820-74736839 MS.gene052421:intron 35.0%
! GGAATTATGGTCTTCTTTTC+TGG + chr6.1:74737798-74737817 None:intergenic 35.0%
! TCGATGAACGATAGTTTTTG+AGG + chr6.1:74738847-74738866 None:intergenic 35.0%
! TCGGATGTTTTCAAAGCTTA+AGG - chr6.1:74738882-74738901 MS.gene052421:intron 35.0%
! TCTTCAGGTTCAATGTAATC+AGG + chr6.1:74740252-74740271 None:intergenic 35.0%
! TTGGTTTCTTTTGGATTTGC+TGG - chr6.1:74737840-74737859 MS.gene052421:intron 35.0%
!! ACCTATTAGGTTTTCTGGAA+AGG + chr6.1:74738205-74738224 None:intergenic 35.0%
!! CATTTCTAAGACATCACACA+TGG - chr6.1:74740570-74740589 MS.gene052421:intron 35.0%
!! CCATTTGATGTTCTGAAGTT+TGG + chr6.1:74740490-74740509 None:intergenic 35.0%
!! CCTAAAGCTAAGGTTTTAGT+CGG - chr6.1:74740876-74740895 MS.gene052421:CDS 35.0%
!! GGTGTACCGTTTTTAATAGA+AGG + chr6.1:74740717-74740736 None:intergenic 35.0%
!! TCAATACATACTCTAGGGTA+GGG + chr6.1:74738094-74738113 None:intergenic 35.0%
!! TGCCTTTACTGATTTATCGT+AGG + chr6.1:74740028-74740047 None:intergenic 35.0%
!! TTAAAGGGCCATTTTGCTTT+AGG - chr6.1:74740780-74740799 MS.gene052421:CDS 35.0%
!! TTCAATACATACTCTAGGGT+AGG + chr6.1:74738095-74738114 None:intergenic 35.0%
!!! TGCATTTTAACTGTTGTGGT+AGG - chr6.1:74738371-74738390 MS.gene052421:CDS 35.0%
AAGGAGCAATCTGCATCATA+TGG + chr6.1:74740972-74740991 None:intergenic 40.0%
AAGTTATCAGGAAGGCTTCA+TGG + chr6.1:74738641-74738660 None:intergenic 40.0%
ACATTGACATTCTTGACCCA+AGG + chr6.1:74737284-74737303 None:intergenic 40.0%
ACTCTAACCTACGTCAGATA+TGG + chr6.1:74737048-74737067 None:intergenic 40.0%
AGACATACAGTCGGTCTAAT+AGG + chr6.1:74739290-74739309 None:intergenic 40.0%
AGTAACACGAGACATACAGT+CGG + chr6.1:74739299-74739318 None:intergenic 40.0%
AGTTATCAGGAAGGCTTCAT+GGG + chr6.1:74738640-74738659 None:intergenic 40.0%
ATATCTGACGTAGGTTAGAG+TGG - chr6.1:74737047-74737066 MS.gene052421:intron 40.0%
ATGAAGCCTTCCTGATAACT+TGG - chr6.1:74738640-74738659 MS.gene052421:intron 40.0%
ATTACCTGACTAAACCCATC+AGG + chr6.1:74740315-74740334 None:intergenic 40.0%
CAATATGAGCCCAAGTTATC+AGG + chr6.1:74738653-74738672 None:intergenic 40.0%
CAGATCATTGATCCAGACTT+TGG - chr6.1:74736799-74736818 MS.gene052421:intron 40.0%
CATTCAACTCACTTTATGCC+AGG - chr6.1:74738314-74738333 MS.gene052421:intron 40.0%
CATTCTCGCTCTCTTCTATA+GGG - chr6.1:74739721-74739740 MS.gene052421:intron 40.0%
CATTGACATTCTTGACCCAA+GGG + chr6.1:74737283-74737302 None:intergenic 40.0%
CTGAAGTCATGTGAGTAGTT+CGG - chr6.1:74740684-74740703 MS.gene052421:intron 40.0%
GAAACGGCATAATTTCCCAT+TGG + chr6.1:74740282-74740301 None:intergenic 40.0%
GACATACAGTCGGTCTAATA+GGG + chr6.1:74739289-74739308 None:intergenic 40.0%
GCAGGAATAGAATACCTTGT+TGG + chr6.1:74739550-74739569 None:intergenic 40.0%
GCATGTACCCTGTTCAATAA+AGG - chr6.1:74740526-74740545 MS.gene052421:intron 40.0%
GTCAGATATGGCTCAAACAA+TGG + chr6.1:74737036-74737055 None:intergenic 40.0%
GTGTGATGTCTTAGAAATGC+GGG + chr6.1:74740569-74740588 None:intergenic 40.0%
GTTGTCAAATGTCATCAAGC+AGG + chr6.1:74739568-74739587 None:intergenic 40.0%
GTTTCAATAACATGGCCTGA+TGG - chr6.1:74740297-74740316 MS.gene052421:CDS 40.0%
TAATAGTCGGCCTAAAGCTA+AGG - chr6.1:74740866-74740885 MS.gene052421:CDS 40.0%
TAGTGACTCCAGAAACCATA+GGG + chr6.1:74737890-74737909 None:intergenic 40.0%
TATACTTCCGAAGTGGCTTT+GGG - chr6.1:74738598-74738617 MS.gene052421:CDS 40.0%
TATCCATTTGGTAGAGGTTC+AGG - chr6.1:74739093-74739112 MS.gene052421:intron 40.0%
TCAGAACATCAAATGGCGTT+CGG - chr6.1:74740494-74740513 MS.gene052421:intron 40.0%
TCATTCTCGCTCTCTTCTAT+AGG - chr6.1:74739720-74739739 MS.gene052421:intron 40.0%
TCATTTACCACGTCCTTGAT+CGG + chr6.1:74737005-74737024 None:intergenic 40.0%
TCGATGTTGCAAAAGGAGTT+CGG - chr6.1:74738863-74738882 MS.gene052421:intron 40.0%
TCGTTCATCGATGTTGCAAA+AGG - chr6.1:74738856-74738875 MS.gene052421:intron 40.0%
TGAAGCCTTCCTGATAACTT+GGG - chr6.1:74738641-74738660 MS.gene052421:intron 40.0%
TGAAGTCATGTGAGTAGTTC+GGG - chr6.1:74740685-74740704 MS.gene052421:intron 40.0%
TGAATACATGGGAGTCAAGT+TGG - chr6.1:74737821-74737840 MS.gene052421:intron 40.0%
TGTGATGTCTTAGAAATGCG+GGG + chr6.1:74740568-74740587 None:intergenic 40.0%
TGTGCTAAAATACGCCAACA+AGG - chr6.1:74739533-74739552 MS.gene052421:intron 40.0%
TTAAACAGGATGAATGGACG+GGG - chr6.1:74740199-74740218 MS.gene052421:intron 40.0%
TTAGTGACTCCAGAAACCAT+AGG + chr6.1:74737891-74737910 None:intergenic 40.0%
TTGACTCCCATGTATTCAGT+TGG + chr6.1:74737819-74737838 None:intergenic 40.0%
TTGCAGATCGATAAAGCTCT+AGG - chr6.1:74736856-74736875 MS.gene052421:intron 40.0%
! CCGACTAAAACCTTAGCTTT+AGG + chr6.1:74740879-74740898 None:intergenic 40.0%
! GTGGTGGAAAAATAAGCTCT+CGG + chr6.1:74738483-74738502 None:intergenic 40.0%
! GTTGGTTAGAAGCATGAGAT+TGG + chr6.1:74738953-74738972 None:intergenic 40.0%
! TTGGAAGTATACTTCCGAAG+TGG - chr6.1:74738591-74738610 MS.gene052421:CDS 40.0%
!! CACTTTGTTGTTGGAGTTGT+AGG - chr6.1:74739841-74739860 MS.gene052421:CDS 40.0%
!! GAACGATAGTTTTTGAGGAG+TGG + chr6.1:74738842-74738861 None:intergenic 40.0%
!! GGCCCTTTAAAGTTTGCTTT+AGG + chr6.1:74740770-74740789 None:intergenic 40.0%
!! TTGAATTGCAGGTGTCGTTT+CGG - chr6.1:74736955-74736974 MS.gene052421:intron 40.0%
!! TTTTAACTGTTGTGGTAGGC+TGG - chr6.1:74738375-74738394 MS.gene052421:CDS 40.0%
!!! ATGTGTCATTTTGATGCCGA+TGG - chr6.1:74739060-74739079 MS.gene052421:intron 40.0%
!!! GGAGTCAAGTTGGTTTCTTT+TGG - chr6.1:74737831-74737850 MS.gene052421:intron 40.0%
!!! TCTTTTGGATTTGCTGGACA+AGG - chr6.1:74737846-74737865 MS.gene052421:intron 40.0%
AACTTCTCACTACTACCGAG+TGG - chr6.1:74737913-74737932 MS.gene052421:intron 45.0%
ACCTGAAGAAATTCGGCCAA+TGG - chr6.1:74740263-74740282 MS.gene052421:CDS 45.0%
ACTCGGTAGTAGTGAGAAGT+TGG + chr6.1:74737914-74737933 None:intergenic 45.0%
AGCAAAAAGACCACATGTGC+CGG + chr6.1:74740819-74740838 None:intergenic 45.0%
AGTTGAATGTCTCCTGTTCC+CGG + chr6.1:74738303-74738322 None:intergenic 45.0%
ATCTTGGAAACATCGCCTTG+AGG + chr6.1:74739479-74739498 None:intergenic 45.0%
ATGAGCCCAAGTTATCAGGA+AGG + chr6.1:74738649-74738668 None:intergenic 45.0%
CAACAGTGAGACGGAATGAT+CGG - chr6.1:74740097-74740116 MS.gene052421:intron 45.0%
CAAGATCAGACCAGTCAATC+GGG - chr6.1:74738426-74738445 MS.gene052421:intron 45.0%
CAGACAATGGAACGGTTAGT+TGG - chr6.1:74741003-74741022 MS.gene052421:intron 45.0%
CATATGACAGTTTGAGCAGC+AGG - chr6.1:74737235-74737254 MS.gene052421:intron 45.0%
CATTCCACTATCTCCAGAAG+CGG + chr6.1:74739438-74739457 None:intergenic 45.0%
CCAAGATCAGACCAGTCAAT+CGG - chr6.1:74738425-74738444 MS.gene052421:intron 45.0%
CCTGAAGAAATTCGGCCAAT+GGG - chr6.1:74740264-74740283 MS.gene052421:CDS 45.0%
CTGGTCTGATCTTGGCTTAA+GGG + chr6.1:74738420-74738439 None:intergenic 45.0%
CTTACCAACTATGGTCTCTC+CGG - chr6.1:74737668-74737687 MS.gene052421:intron 45.0%
CTTTAGGCCTCATTCATCCT+TGG + chr6.1:74740754-74740773 None:intergenic 45.0%
GAAATCGTCTGTAAACCTGC+TGG + chr6.1:74737353-74737372 None:intergenic 45.0%
GATCCTGAACCTCTACCAAA+TGG + chr6.1:74739099-74739118 None:intergenic 45.0%
GGAAATTCCTCGGTATCAAC+TGG - chr6.1:74736742-74736761 MS.gene052421:intron 45.0%
GGAAGTTGCTCTGCGAATAA+CGG + chr6.1:74737332-74737351 None:intergenic 45.0%
GTATACTTCCGAAGTGGCTT+TGG - chr6.1:74738597-74738616 MS.gene052421:CDS 45.0%
GTGATGTCTTAGAAATGCGG+GGG + chr6.1:74740567-74740586 None:intergenic 45.0%
GTTTGAGCCATATCTGACGT+AGG - chr6.1:74737038-74737057 MS.gene052421:intron 45.0%
TAAACAGGATGAATGGACGG+GGG - chr6.1:74740200-74740219 MS.gene052421:intron 45.0%
TATACTTCCGGACACATGTG+TGG + chr6.1:74738502-74738521 None:intergenic 45.0%
TATCGCTGTATCCAGTTGCA+AGG - chr6.1:74737379-74737398 MS.gene052421:CDS 45.0%
TGATGTCTTAGAAATGCGGG+GGG + chr6.1:74740566-74740585 None:intergenic 45.0%
TGGAAAAGCGGTCTACTTGT+CGG + chr6.1:74739751-74739770 None:intergenic 45.0%
TGGTCCAAGCTTACCAACTA+TGG - chr6.1:74737659-74737678 MS.gene052421:intron 45.0%
TTCTCGACAACAGCTACACA+AGG + chr6.1:74739039-74739058 None:intergenic 45.0%
TTGCAGGTTGTTCAGCAGTT+TGG - chr6.1:74739242-74739261 MS.gene052421:intron 45.0%
! AAAAATTTGCAGGGGGGTGT+AGG - chr6.1:74737555-74737574 MS.gene052421:CDS 45.0%
! ACTGGTCTGATCTTGGCTTA+AGG + chr6.1:74738421-74738440 None:intergenic 45.0%
! ATACTTCCGAAGTGGCTTTG+GGG - chr6.1:74738599-74738618 MS.gene052421:CDS 45.0%
! CCCATCCAGAAGTATACTTC+CGG + chr6.1:74738514-74738533 None:intergenic 45.0%
! CCGGAAGTATACTTCTGGAT+GGG - chr6.1:74738511-74738530 MS.gene052421:intron 45.0%
! GTCGTCCAGAAGTATACTTC+TGG + chr6.1:74738555-74738574 None:intergenic 45.0%
! TCAGCCCAAAGTTTTCAGTC+TGG + chr6.1:74738690-74738709 None:intergenic 45.0%
! TCCGGAAGTATACTTCTGGA+TGG - chr6.1:74738510-74738529 MS.gene052421:intron 45.0%
! TCTGCGAATAACGGTTTTGC+TGG + chr6.1:74737323-74737342 None:intergenic 45.0%
! TGTGTCCGGAAGTATACTTC+TGG - chr6.1:74738506-74738525 MS.gene052421:intron 45.0%
! TTTTCCACCACACATGTGTC+CGG - chr6.1:74738492-74738511 MS.gene052421:intron 45.0%
! TTTTCCGGAGAGACCATAGT+TGG + chr6.1:74737675-74737694 None:intergenic 45.0%
!! AGATAGTGGAATGCCTGAAG+TGG - chr6.1:74739445-74739464 MS.gene052421:intron 45.0%
!! ATACATACTCTAGGGTAGGG+TGG + chr6.1:74738091-74738110 None:intergenic 45.0%
!! GAGACCATAGTTGGTAAGCT+TGG + chr6.1:74737666-74737685 None:intergenic 45.0%
!! GATCGATAAAGCTCTAGGAG+AGG - chr6.1:74736861-74736880 MS.gene052421:intron 45.0%
!!! AACTTTTTTGCCGGCACATG+TGG - chr6.1:74740806-74740825 MS.gene052421:CDS 45.0%
ACTTCAGATGTGCACATCCG+CGG + chr6.1:74740671-74740690 None:intergenic 50.0%
AGGCTGGAATTTCACTCGCT+TGG - chr6.1:74738391-74738410 MS.gene052421:intron 50.0%
AGTCGAGCCAAGGATGAATG+AGG - chr6.1:74740744-74740763 MS.gene052421:intron 50.0%
ATCAAGCTGACCCGATTGAC+TGG + chr6.1:74738439-74738458 None:intergenic 50.0%
CAAGGACGTGCAATTATGCG+CGG - chr6.1:74737864-74737883 MS.gene052421:intron 50.0%
CACGTGTTGCCGAAAGTTTG+AGG + chr6.1:74736902-74736921 None:intergenic 50.0%
CCCATTGGCCGAATTTCTTC+AGG + chr6.1:74740267-74740286 None:intergenic 50.0%
CGCTTTCAACACGTCATCCT+CGG + chr6.1:74736773-74736792 None:intergenic 50.0%
GAGGAGATTCACCTTGCAAC+TGG + chr6.1:74737393-74737412 None:intergenic 50.0%
GCTGATATGGGTGCTAGAGT+TGG - chr6.1:74737615-74737634 MS.gene052421:CDS 50.0%
GTTGGAGTTGTAGGCACAAC+TGG - chr6.1:74739850-74739869 MS.gene052421:intron 50.0%
GTTTGAGCAGCAGGCAAATG+AGG - chr6.1:74737244-74737263 MS.gene052421:intron 50.0%
TACACCAGCATGTCCGATCA+AGG - chr6.1:74736989-74737008 MS.gene052421:intron 50.0%
TAGTGGAATGCCTGAAGTGG+TGG - chr6.1:74739448-74739467 MS.gene052421:intron 50.0%
TCATTCCGTCTCACTGTTGC+AGG + chr6.1:74740096-74740115 None:intergenic 50.0%
TGCATCCTGCAACAGTGAGA+CGG - chr6.1:74740088-74740107 MS.gene052421:intron 50.0%
TGGTAGAGGTTCAGGATCTC+AGG - chr6.1:74739101-74739120 MS.gene052421:intron 50.0%
TTGTCACAGCTATCCGCTTC+TGG - chr6.1:74739422-74739441 MS.gene052421:intron 50.0%
! CCTTGTTATCGACATGCCTC+CGG - chr6.1:74738281-74738300 MS.gene052421:intron 50.0%
! CTATCCGCTTCTGGAGATAG+TGG - chr6.1:74739431-74739450 MS.gene052421:intron 50.0%
! CTTGTTATCGACATGCCTCC+GGG - chr6.1:74738282-74738301 MS.gene052421:intron 50.0%
! TCGGCTTGATTTCAGCTCGA+AGG + chr6.1:74738464-74738483 None:intergenic 50.0%
! TGCGGCAGTCACTTTGTTGT+TGG - chr6.1:74739832-74739851 MS.gene052421:CDS 50.0%
!! ATGGCCTGATGGGTTTAGTC+AGG - chr6.1:74740308-74740327 MS.gene052421:CDS 50.0%
!! CCGATTGACTGGTCTGATCT+TGG + chr6.1:74738428-74738447 None:intergenic 50.0%
!! TACTTCCGAAGTGGCTTTGG+GGG - chr6.1:74738600-74738619 MS.gene052421:CDS 50.0%
ACGTCCTTGATCGGACATGC+TGG + chr6.1:74736996-74737015 None:intergenic 55.0%
ACTTCCGGACACATGTGTGG+TGG + chr6.1:74738499-74738518 None:intergenic 55.0%
AGCATGTCCGATCAAGGACG+TGG - chr6.1:74736995-74737014 MS.gene052421:intron 55.0%
GAAGTGGTGGCAGATCCTCA+AGG - chr6.1:74739461-74739480 MS.gene052421:intron 55.0%
GAGGTTCAGGATCTCAGGCA+TGG - chr6.1:74739106-74739125 MS.gene052421:intron 55.0%
GGTATCAACTGGAACAGCCG+AGG - chr6.1:74736753-74736772 MS.gene052421:intron 55.0%
TGAATGTCTCCTGTTCCCGG+AGG + chr6.1:74738300-74738319 None:intergenic 55.0%
TGAGCAGCAGGCAAATGAGG+TGG - chr6.1:74737247-74737266 MS.gene052421:intron 55.0%
TGAGGATCTGCCACCACTTC+AGG + chr6.1:74739461-74739480 None:intergenic 55.0%
TGATCGGTCTGCTCAGAGTG+TGG - chr6.1:74740113-74740132 MS.gene052421:intron 55.0%
TGCAATTATGCGCGGCCCTA+TGG - chr6.1:74737872-74737891 MS.gene052421:intron 55.0%
TGTCTTAGAAATGCGGGGGG+TGG + chr6.1:74740563-74740582 None:intergenic 55.0%
TTCGCAGAGCAACTTCCAGC+AGG - chr6.1:74737335-74737354 MS.gene052421:CDS 55.0%
! CCGGAGGCATGTCGATAACA+AGG + chr6.1:74738284-74738303 None:intergenic 55.0%
! GGCTGTTCCAGTTGATACCG+AGG + chr6.1:74736752-74736771 None:intergenic 55.0%
ACCACAGCTGAGTCGAGCCA+AGG - chr6.1:74740734-74740753 MS.gene052421:intron 60.0%
ATCGACATGCCTCCGGGAAC+AGG - chr6.1:74738288-74738307 MS.gene052421:intron 60.0%
ATGCGCGGCCCTATGGTTTC+TGG - chr6.1:74737879-74737898 MS.gene052421:intron 60.0%
GCAGCAGGCAAATGAGGTGG+TGG - chr6.1:74737250-74737269 MS.gene052421:intron 60.0%
! TCCTTGGCTCGACTCAGCTG+TGG + chr6.1:74740738-74740757 None:intergenic 60.0%
!! TTCCGAAGTGGCTTTGGGGG+CGG - chr6.1:74738603-74738622 MS.gene052421:CDS 60.0%
TCCCGCCCCCAAAGCCACTT+CGG + chr6.1:74738608-74738627 None:intergenic 65.0%
! AGGTGGTGGCAGTGCTCCCT+TGG - chr6.1:74737264-74737283 MS.gene052421:intron 65.0%
! GGTGGTGGCAGTGCTCCCTT+GGG - chr6.1:74737265-74737284 MS.gene052421:intron 65.0%
!! TCCGAAGTGGCTTTGGGGGC+GGG - chr6.1:74738604-74738623 MS.gene052421:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 74736621 74741035 74736621 ID=MS.gene052421
chr6.1 mRNA 74736621 74741035 74736621 ID=MS.gene052421.t1;Parent=MS.gene052421
chr6.1 exon 74741032 74741035 74741032 ID=MS.gene052421.t1.exon1;Parent=MS.gene052421.t1
chr6.1 CDS 74741032 74741035 74741032 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74740774 74740916 74740774 ID=MS.gene052421.t1.exon2;Parent=MS.gene052421.t1
chr6.1 CDS 74740774 74740916 74740774 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74740640 74740690 74740640 ID=MS.gene052421.t1.exon3;Parent=MS.gene052421.t1
chr6.1 CDS 74740640 74740690 74740640 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74740256 74740411 74740256 ID=MS.gene052421.t1.exon4;Parent=MS.gene052421.t1
chr6.1 CDS 74740256 74740411 74740256 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74739946 74740089 74739946 ID=MS.gene052421.t1.exon5;Parent=MS.gene052421.t1
chr6.1 CDS 74739946 74740089 74739946 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74739722 74739864 74739722 ID=MS.gene052421.t1.exon6;Parent=MS.gene052421.t1
chr6.1 CDS 74739722 74739864 74739722 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74739321 74739390 74739321 ID=MS.gene052421.t1.exon7;Parent=MS.gene052421.t1
chr6.1 CDS 74739321 74739390 74739321 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74738753 74738848 74738753 ID=MS.gene052421.t1.exon8;Parent=MS.gene052421.t1
chr6.1 CDS 74738753 74738848 74738753 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74738534 74738623 74738534 ID=MS.gene052421.t1.exon9;Parent=MS.gene052421.t1
chr6.1 CDS 74738534 74738623 74738534 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74738355 74738408 74738355 ID=MS.gene052421.t1.exon10;Parent=MS.gene052421.t1
chr6.1 CDS 74738355 74738408 74738355 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74738102 74738225 74738102 ID=MS.gene052421.t1.exon11;Parent=MS.gene052421.t1
chr6.1 CDS 74738102 74738225 74738102 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74737522 74737646 74737522 ID=MS.gene052421.t1.exon12;Parent=MS.gene052421.t1
chr6.1 CDS 74737522 74737646 74737522 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74737327 74737449 74737327 ID=MS.gene052421.t1.exon13;Parent=MS.gene052421.t1
chr6.1 CDS 74737327 74737449 74737327 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
chr6.1 exon 74736621 74736674 74736621 ID=MS.gene052421.t1.exon14;Parent=MS.gene052421.t1
chr6.1 CDS 74736621 74736674 74736621 ID=cds.MS.gene052421.t1;Parent=MS.gene052421.t1
Gene Sequence

>MS.gene052421

ATGTGTGCGTAGTCTGTGTTTAAGTGCTTTAGACTTTTGAATGCTAAAAATTGAGACAAGTTAGATTGTGTATCAAGTTAAGATTTATAGTTTCATCTAATGTTTTCTTATATATGCAGTTGGAAATTCCTCGGTATCAACTGGAACAGCCGAGGATGACGTGTTGAAAGCGTTGTCTCAGATCATTGATCCAGACTTTGGAACAGATATTGTTACTTGCGGATTTGTGAAAGATTTGCAGATCGATAAAGCTCTAGGAGAGGTCTTAAAATCAAACGCCTCAAACTTTCGGCAACACGTGTGAATGACAATGTTCTTACAAGAAGTTTTTGCTTTGAATTGCAGGTGTCGTTTCGGTTAGAGCTCACTACACCAGCATGTCCGATCAAGGACGTGGTAAATGACACAATTGCCATTGTTTGAGCCATATCTGACGTAGGTTAGAGTGGTAGACTTTTGTTCTGTAAACTCATTACATATAGAAGGGATAATAAAAAATTAAAAATTGCATATATTTTCCATGATAAAGAAATGAATGTTTTGTAGTCGATTATGTATCTTTTCCAGTCTTGAGTTTCATGTAATTCTGGGAAACTAAAAAATGATTATATATGCATATGACAGTTTGAGCAGCAGGCAAATGAGGTGGTGGCAGTGCTCCCTTGGGTCAAGAATGTCAATGTTACGATGTCTGCGCAGCCAGCAAAACCGTTATTCGCAGAGCAACTTCCAGCAGGTTTACAGACGATTTCAAATATTATCGCTGTATCCAGTTGCAAGGTGAATCTCCTCATCATATATTGGTCATATTAAGTCGTTTGCGATAATTTTGGCTGCTTTCTTGTTAATATTTTTTTTTCTTCCATAAATAGTTAATCTAATTACCATGATTTACATTTCGTCTCATGAATCGTGATTGAATTTTGTCAAAAATAAAAATTTGCAGGGGGGTGTAGGAAAATCAACTGTAGCAGTAAACCTTGCTTATACTTTGGCTGATATGGGTGCTAGAGTTGGTATATTTGATGCTGATATTTATGGTCCAAGCTTACCAACTATGGTCTCTCCGGAAAATCGAATATTAGAAATGGTAACATATGATAAACCATGTGTTTTTAAATGTATAATATAGGGAAGTACAAAAAACATGATTGTTTGAGTGTTGCTGCAGAATCCAGAAAAGAAGACCATAATTCCAACTGAATACATGGGAGTCAAGTTGGTTTCTTTTGGATTTGCTGGACAAGGACGTGCAATTATGCGCGGCCCTATGGTTTCTGGAGTCACTAACCAACTTCTCACTACTACCGAGTGGTATGCATTTCTGAAAAACATAAAAAAAAAAGATATGCTATGCATAGAATAGGGAAAAAGTTACATGCTATATTGCCTTAACAAATCATGTCATTTAAAAAGATTCTGCATGAGATTTATGTGTTATGTTTTATGTTATTCAAATTTATTGGTCCACCCTACCCTAGAGTATGTATTGAACTACCTACTTGATGCTTTTTAAATTAACCACATTTATATTTTTTTTGACAGAATTAACCACATTTATATAATAATCTTTACTTTAGTCCTTTCCAGAAAACCTAATAGGTTATGCTTGATATGTAGTCTTGATTTGGTTTACAAAATGTAGGGGCGAGCTTGATTACCTTGTTATCGACATGCCTCCGGGAACAGGAGACATTCAACTCACTTTATGCCAGGTTATAACTTACCAATCCTTTAGTTTGTTTCACATTGCATTTTAACTGTTGTGGTAGGCTGGAATTTCACTCGCTTGGTCACCCTTAAGCCAAGATCAGACCAGTCAATCGGGTCAGCTTGATCACCTTCGAGCTGAAATCAAGCCGAGAGCTTATTTTTCCACCACACATGTGTCCGGAAGTATACTTCTGGATGGGAAAAAACTGTATTTTTATCCAGAAGTATACTTCTGGACGACACAAAAAATGTTTCTTTTGGAAGTATACTTCCGAAGTGGCTTTGGGGGCGGGAAAAGAAGCTCCCATGAAGCCTTCCTGATAACTTGGGCTCATATTGAGCTGAAATTTAAGCCAGACTGAAAACTTTGGGCTGAAATATGGGCACCGCAATCAAATTTTACGTGTGAAGCCTATAGTGTAATTACTTTAACTACTTGCAATTCATTTTGACTTTGATTGTGTATTCTTATAGATAGTCCCATTAACTGCTGCTGTAATTGTTACCACTCCTCAAAAACTATCGTTCATCGATGTTGCAAAAGGAGTTCGGATGTTTTCAAAGCTTAAGGTGATTCTTCTACATATCAAAGACATAACTATTACATTTTGTTTTTCCAATCTCATGCTTCTAACCAACACATACTTGATACTATTCACATTTAATACTTATTTATATTATTTTGTGTTTATGTAAAAGGTACCTTGTGTAGCTGTTGTCGAGAACATGTGTCATTTTGATGCCGATGGAAAAAGATACTATCCATTTGGTAGAGGTTCAGGATCTCAGGCATGGATAACGTTTCTGAATTTTAACTTTTTGTTTTCTTAATCATATTTATTATATGATGCTTAATATAAAAACAATTATGTACTTTCTGTGACACATGTTTGATTGTTCGATCATATTTGCAGGTTGTTCAGCAGTTTGGAATACCGCATCTATTTGATCTCCCTATTAGACCGACTGTATGTCTCGTGTTACTTCATCTATTATACTCAAACCTTTAGTTTATTCTCTTCTCTCGATGTTTTTTGCTTGTTTCTATATTGCTAAATGCGAACTAAGATTTGAGTTTATTTGAACAATTGTCACAGCTATCCGCTTCTGGAGATAGTGGAATGCCTGAAGTGGTGGCAGATCCTCAAGGCGATGTTTCCAAGATATTCCAAAATCTAGGAGTATGTGTTGTGCAGCAGTGTGCTAAAATACGCCAACAAGGTATTCTATTCCTGCTTGATGACATTTGACAACAAGCTAGATGTTCACCGAATGTAACTAGTTTTAAAGTTTATAATTCGTCAATCACAAAATCACTGCTCAATTTTCGGTAGTTGAAATGTTTACTTATTTTTCTCTTACTAATAAATCTTATCTTATGAATGTTCATTCTCGCTCTCTTCTATAGGGTTTTCCGACAAGTAGACCGCTTTTCCATTAAGTATATATGCAAAACTAAGTAGTCTGTATAACCCTGAATATTGCATAATAGAAAAACTGCGGCAGTCACTTTGTTGTTGGAGTTGTAGGCACAACTGGTCGATCATTGTGTTCTTGTATGTGTTTATTGATCTAATACCTAATGCATCCGAATACAAATTTTTTCACTTTCTTCTAGCATTCATGCTTTTTCTAAGATTGATATTTTTTTTTTGTTTTTGTTATTTTCAATTCAGTTTCAACAGCTGTGACCTACGATAAATCAGTAAAGGCAATTAGAGTAAAAGTACCAGATTCAGATGAAGAATTCTTTCTGCATCCTGCAACAGTGAGACGGAATGATCGGTCTGCTCAGAGTGTGGTATGTTGATATTTAAGAAAAATAAAAATGCTGTTTATCCATCTCATTTGAAGCTAACTTTATTTTAAACAGGATGAATGGACGGGGGAGCAGAAATTGCAGTATACCGATATTCCTGATTACATTGAACCTGAAGAAATTCGGCCAATGGGAAATTATGCCGTTTCAATAACATGGCCTGATGGGTTTAGTCAGGTAATGTACACACATCAGATTGGACAGTTCCATTGAAAAAGAAAGCTTTAAACTGTATATTATTAGCATTAGCATATCAATTGTCTCGGTTAGAAATATGGTTTGGACTAAGCTTTATGTAACGAGAATAGCCTTCAAACCTAATATATGTGCTTGACCAAACTTCAGAACATCAAATGGCGTTCGGCACTGTCTAGCATGTACCCTGTTCAATAAAGGGATGAACTTTTCCACCCCCCGCATTTCTAAGACATCACACATGGTTTCATAACTGTATTTTCGGACCATATAATTTGTCCGAAAGTGTACTTCCAGATGATACAAAAATTGTATTTTTTCCGCGGATGTGCACATCTGAAGTCATGTGAGTAGTTCGGGAAAGTTCCTTCTATTAAAAACGGTACACCACAGCTGAGTCGAGCCAAGGATGAATGAGGCCTAAAGCAAACTTTAAAGGGCCATTTTGCTTTAGGTTCAACTTTTTTGCCGGCACATGTGGTCTTTTTGCTTTATAAAACGAGTAGCAATTAATTTTTTAATAGTCGGCCTAAAGCTAAGGTTTTAGTCGGCTTATAATGTGTTAATTGTTTAGTGTTAAGCAACTATATATATGCTCTTAAGTTGATTTTTATTTTTTTACCATATGATGCAGATTGCTCCTTATGATCAACTTCAGACAATGGAACGGTTAGTTGGTGTTTCTTGA

Protein sequence

>MS.gene052421.t1

MFGNSSVSTGTAEDDVLKALSQIIDPDFGTDIVTCGFVKDLQIDKALGEVSFRLELTTPACPIKDVFEQQANEVVAVLPWVKNVNVTMSAQPAKPLFAEQLPAGLQTISNIIAVSSCKGGVGKSTVAVNLAYTLADMGARVGIFDADIYGPSLPTMVSPENRILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVTNQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGDVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKSVKAIRVKVPDSDEEFFLHPATVRRNDRSAQSVDEWTGEQKLQYTDIPDYIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTMERLVGVS