Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31091.t1 | XP_003597438.1 | 97.5 | 361 | 9 | 0 | 1 | 361 | 2 | 362 | 3.20E-194 | 687.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31091.t1 | P25083 | 74.7 | 388 | 69 | 4 | 1 | 361 | 1 | 386 | 1.3e-156 | 553.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31091.t1 | G7IUC4 | 97.5 | 361 | 9 | 0 | 1 | 361 | 2 | 362 | 2.3e-194 | 687.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene31091 | 0.800132 | 1.66E-48 | -1.69E-46 |
| MS.gene050961 | MS.gene31091 | 0.830329 | 3.12E-55 | -1.69E-46 |
| MS.gene051959 | MS.gene31091 | 0.843314 | 1.51E-58 | -1.69E-46 |
| MS.gene051960 | MS.gene31091 | 0.841499 | 4.58E-58 | -1.69E-46 |
| MS.gene052053 | MS.gene31091 | 0.9756 | 2.98E-140 | -1.69E-46 |
| MS.gene052091 | MS.gene31091 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene052570 | MS.gene31091 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene053602 | MS.gene31091 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene053932 | MS.gene31091 | 0.827969 | 1.17E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene31091 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene055549 | MS.gene31091 | 0.857952 | 1.15E-62 | -1.69E-46 |
| MS.gene055550 | MS.gene31091 | 0.860907 | 1.49E-63 | -1.69E-46 |
| MS.gene055551 | MS.gene31091 | 0.826127 | 3.22E-54 | -1.69E-46 |
| MS.gene056365 | MS.gene31091 | 0.817978 | 2.49E-52 | -1.69E-46 |
| MS.gene056530 | MS.gene31091 | 0.864956 | 8.37E-65 | -1.69E-46 |
| MS.gene057001 | MS.gene31091 | 0.830656 | 2.60E-55 | -1.69E-46 |
| MS.gene057226 | MS.gene31091 | 0.822334 | 2.50E-53 | -1.69E-46 |
| MS.gene057472 | MS.gene31091 | 0.814723 | 1.33E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene31091 | 0.857124 | 2.02E-62 | -1.69E-46 |
| MS.gene058629 | MS.gene31091 | 0.829593 | 4.72E-55 | -1.69E-46 |
| MS.gene058630 | MS.gene31091 | 0.836025 | 1.19E-56 | -1.69E-46 |
| MS.gene05884 | MS.gene31091 | 0.833279 | 5.84E-56 | -1.69E-46 |
| MS.gene060237 | MS.gene31091 | 0.83334 | 5.64E-56 | -1.69E-46 |
| MS.gene06023 | MS.gene31091 | 0.825558 | 4.39E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31091.t1 | MTR_2g098070 | 97.507 | 361 | 9 | 0 | 1 | 361 | 2 | 362 | 0.0 | 715 |
| MS.gene31091.t1 | MTR_3g028590 | 73.743 | 358 | 89 | 3 | 5 | 361 | 40 | 393 | 0.0 | 517 |
| MS.gene31091.t1 | MTR_3g028590 | 73.743 | 358 | 89 | 3 | 5 | 361 | 36 | 389 | 0.0 | 516 |
| MS.gene31091.t1 | MTR_4g078545 | 72.118 | 373 | 88 | 3 | 1 | 360 | 1 | 370 | 0.0 | 514 |
| MS.gene31091.t1 | MTR_8g036880 | 73.481 | 362 | 87 | 3 | 7 | 361 | 40 | 399 | 2.71e-179 | 503 |
| MS.gene31091.t1 | MTR_8g107270 | 58.947 | 285 | 117 | 0 | 64 | 348 | 17 | 301 | 1.41e-126 | 366 |
| MS.gene31091.t1 | MTR_3g104500 | 40.260 | 308 | 172 | 7 | 54 | 354 | 23 | 325 | 4.92e-71 | 225 |
| MS.gene31091.t1 | MTR_5g009500 | 31.013 | 316 | 165 | 11 | 53 | 335 | 26 | 321 | 3.73e-35 | 132 |
| MS.gene31091.t1 | MTR_5g009500 | 24.876 | 201 | 134 | 4 | 68 | 257 | 144 | 338 | 1.25e-11 | 65.5 |
| MS.gene31091.t1 | MTR_3g104600 | 30.573 | 314 | 180 | 10 | 61 | 351 | 31 | 329 | 5.48e-35 | 131 |
| MS.gene31091.t1 | MTR_6g091800 | 28.094 | 299 | 194 | 6 | 61 | 348 | 15 | 303 | 4.98e-34 | 128 |
| MS.gene31091.t1 | MTR_8g027975 | 31.847 | 314 | 157 | 12 | 58 | 335 | 44 | 336 | 3.13e-33 | 127 |
| MS.gene31091.t1 | MTR_1g012030 | 29.643 | 280 | 173 | 8 | 65 | 340 | 139 | 398 | 1.56e-30 | 120 |
| MS.gene31091.t1 | MTR_1g012030 | 27.962 | 211 | 127 | 5 | 53 | 258 | 221 | 411 | 2.19e-16 | 80.5 |
| MS.gene31091.t1 | MTR_3g107510 | 28.814 | 295 | 175 | 10 | 68 | 352 | 125 | 394 | 6.38e-30 | 119 |
| MS.gene31091.t1 | MTR_3g107510 | 26.941 | 219 | 141 | 4 | 42 | 258 | 193 | 394 | 2.09e-17 | 83.2 |
| MS.gene31091.t1 | MTR_3g107510 | 29.189 | 185 | 111 | 5 | 170 | 348 | 122 | 292 | 2.35e-13 | 71.2 |
| MS.gene31091.t1 | MTR_6g091800 | 26.316 | 323 | 193 | 7 | 61 | 348 | 15 | 327 | 7.43e-30 | 117 |
| MS.gene31091.t1 | MTR_7g064980 | 29.097 | 299 | 195 | 8 | 63 | 351 | 23 | 314 | 1.70e-29 | 116 |
| MS.gene31091.t1 | MTR_6g091800 | 29.796 | 245 | 155 | 4 | 61 | 298 | 15 | 249 | 5.37e-29 | 113 |
| MS.gene31091.t1 | MTR_6g091800 | 28.685 | 251 | 162 | 4 | 61 | 304 | 15 | 255 | 5.46e-29 | 113 |
| MS.gene31091.t1 | MTR_6g091800 | 26.710 | 307 | 181 | 6 | 61 | 333 | 15 | 311 | 2.06e-28 | 113 |
| MS.gene31091.t1 | MTR_4g114320 | 25.839 | 298 | 186 | 8 | 65 | 352 | 123 | 395 | 1.50e-26 | 109 |
| MS.gene31091.t1 | MTR_4g114320 | 27.488 | 211 | 131 | 4 | 51 | 258 | 204 | 395 | 6.71e-17 | 81.6 |
| MS.gene31091.t1 | MTR_7g068340 | 31.047 | 277 | 160 | 8 | 76 | 345 | 98 | 350 | 1.96e-26 | 108 |
| MS.gene31091.t1 | MTR_5g081150 | 27.097 | 310 | 206 | 8 | 51 | 351 | 23 | 321 | 5.95e-26 | 106 |
| MS.gene31091.t1 | MTR_6g091800 | 26.545 | 275 | 161 | 5 | 61 | 304 | 15 | 279 | 8.22e-25 | 102 |
| MS.gene31091.t1 | MTR_6g091800 | 27.509 | 269 | 154 | 5 | 61 | 298 | 15 | 273 | 8.79e-25 | 102 |
| MS.gene31091.t1 | MTR_6g034145 | 28.049 | 246 | 163 | 5 | 114 | 348 | 7 | 249 | 2.20e-24 | 100 |
| MS.gene31091.t1 | MTR_8g096050 | 27.500 | 280 | 183 | 7 | 65 | 340 | 227 | 490 | 1.61e-23 | 102 |
| MS.gene31091.t1 | MTR_2g436930 | 28.013 | 307 | 186 | 9 | 68 | 345 | 18 | 318 | 1.82e-23 | 99.8 |
| MS.gene31091.t1 | MTR_4g016730 | 30.612 | 294 | 170 | 10 | 65 | 351 | 89 | 355 | 1.97e-23 | 100 |
| MS.gene31091.t1 | MTR_6g092210 | 27.500 | 240 | 166 | 5 | 114 | 348 | 7 | 243 | 5.10e-23 | 97.1 |
| MS.gene31091.t1 | MTR_3g098460 | 27.576 | 330 | 205 | 13 | 21 | 340 | 163 | 468 | 1.85e-22 | 98.6 |
| MS.gene31091.t1 | MTR_7g084400 | 28.421 | 285 | 171 | 8 | 65 | 340 | 213 | 473 | 2.39e-22 | 98.2 |
| MS.gene31091.t1 | MTR_4g119770 | 26.074 | 326 | 202 | 9 | 53 | 347 | 4 | 321 | 9.65e-22 | 94.7 |
| MS.gene31091.t1 | MTR_6g091800 | 29.834 | 181 | 111 | 3 | 61 | 234 | 15 | 186 | 1.97e-20 | 88.2 |
| MS.gene31091.t1 | MTR_4g005330 | 25.085 | 295 | 185 | 7 | 64 | 340 | 65 | 341 | 8.76e-20 | 89.7 |
| MS.gene31091.t1 | MTR_7g066690 | 24.068 | 295 | 208 | 6 | 60 | 352 | 12 | 292 | 5.17e-19 | 86.7 |
| MS.gene31091.t1 | MTR_4g005330 | 25.086 | 291 | 182 | 7 | 68 | 340 | 3 | 275 | 1.02e-18 | 85.9 |
| MS.gene31091.t1 | MTR_3g100570 | 26.531 | 294 | 183 | 9 | 65 | 333 | 6 | 291 | 1.73e-18 | 85.5 |
| MS.gene31091.t1 | MTR_4g119770 | 26.820 | 261 | 163 | 7 | 53 | 293 | 4 | 256 | 2.16e-18 | 84.3 |
| MS.gene31091.t1 | MTR_3g074490 | 27.273 | 297 | 168 | 11 | 68 | 340 | 119 | 391 | 8.16e-18 | 84.3 |
| MS.gene31091.t1 | MTR_4g018750 | 25.166 | 302 | 204 | 9 | 56 | 352 | 6 | 290 | 1.62e-17 | 82.4 |
| MS.gene31091.t1 | MTR_1g090330 | 22.015 | 268 | 197 | 4 | 63 | 326 | 12 | 271 | 5.23e-17 | 80.9 |
| MS.gene31091.t1 | MTR_1g090330 | 29.762 | 168 | 110 | 4 | 66 | 232 | 112 | 272 | 2.00e-14 | 73.6 |
| MS.gene31091.t1 | MTR_6g091800 | 26.829 | 205 | 110 | 4 | 61 | 234 | 15 | 210 | 3.12e-16 | 77.0 |
| MS.gene31091.t1 | MTR_6g091910 | 24.757 | 206 | 138 | 4 | 61 | 259 | 15 | 210 | 4.32e-16 | 76.6 |
| MS.gene31091.t1 | MTR_6g091910 | 26.425 | 193 | 132 | 5 | 165 | 348 | 14 | 205 | 7.71e-13 | 67.4 |
| MS.gene31091.t1 | MTR_4g057850 | 25.592 | 211 | 136 | 5 | 66 | 270 | 116 | 311 | 1.21e-15 | 77.0 |
| MS.gene31091.t1 | MTR_2g102010 | 23.776 | 286 | 201 | 6 | 64 | 345 | 16 | 288 | 3.17e-15 | 75.9 |
| MS.gene31091.t1 | MTR_2g436930 | 31.795 | 195 | 106 | 6 | 172 | 345 | 40 | 228 | 4.25e-15 | 74.3 |
| MS.gene31091.t1 | MTR_4g012850 | 25.833 | 240 | 162 | 6 | 114 | 345 | 55 | 286 | 9.31e-15 | 74.3 |
| MS.gene31091.t1 | MTR_4g012850 | 25.114 | 219 | 153 | 4 | 33 | 251 | 79 | 286 | 7.63e-13 | 68.9 |
| MS.gene31091.t1 | MTR_5g081150 | 29.032 | 155 | 101 | 3 | 51 | 201 | 23 | 172 | 1.40e-14 | 73.2 |
| MS.gene31091.t1 | MTR_5g081150 | 29.032 | 155 | 101 | 3 | 51 | 201 | 23 | 172 | 1.71e-14 | 73.2 |
| MS.gene31091.t1 | MTR_5g030530 | 24.832 | 298 | 198 | 9 | 62 | 345 | 5 | 290 | 3.58e-14 | 72.8 |
| MS.gene31091.t1 | MTR_8g090210 | 24.662 | 296 | 177 | 10 | 68 | 340 | 113 | 385 | 7.67e-14 | 72.4 |
| MS.gene31091.t1 | MTR_1g088995 | 25.806 | 279 | 181 | 9 | 52 | 326 | 25 | 281 | 9.51e-14 | 71.6 |
| MS.gene31091.t1 | MTR_5g032420 | 21.993 | 291 | 195 | 6 | 65 | 326 | 6 | 293 | 9.86e-14 | 71.6 |
| MS.gene31091.t1 | MTR_8g066975 | 24.915 | 293 | 204 | 7 | 62 | 345 | 5 | 290 | 1.40e-13 | 70.9 |
| MS.gene31091.t1 | MTR_7g084400 | 28.061 | 196 | 115 | 5 | 65 | 254 | 207 | 382 | 1.69e-13 | 71.6 |
| MS.gene31091.t1 | MTR_3g462140 | 23.611 | 288 | 204 | 6 | 52 | 333 | 2 | 279 | 2.54e-13 | 70.1 |
| MS.gene31091.t1 | MTR_3g462140 | 27.861 | 201 | 127 | 5 | 166 | 352 | 11 | 207 | 2.18e-11 | 64.3 |
| MS.gene31091.t1 | MTR_4g018750 | 29.268 | 205 | 118 | 8 | 166 | 352 | 11 | 206 | 5.47e-12 | 66.2 |
| MS.gene31091.t1 | MTR_8g068890 | 32.558 | 129 | 80 | 3 | 105 | 232 | 165 | 287 | 5.91e-12 | 66.2 |
| MS.gene31091.t1 | MTR_8g068890 | 21.959 | 296 | 196 | 8 | 65 | 333 | 6 | 293 | 8.71e-11 | 62.8 |
| MS.gene31091.t1 | MTR_7g015870 | 28.185 | 259 | 148 | 11 | 116 | 350 | 69 | 313 | 1.33e-11 | 65.1 |
| MS.gene31091.t1 | MTR_7g015870 | 28.125 | 256 | 146 | 11 | 116 | 347 | 65 | 306 | 4.11e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31091.t1 | AT5G13490 | 71.279 | 383 | 85 | 3 | 4 | 361 | 3 | 385 | 0.0 | 526 |
| MS.gene31091.t1 | AT5G13490 | 71.279 | 383 | 85 | 3 | 4 | 361 | 3 | 385 | 0.0 | 526 |
| MS.gene31091.t1 | AT4G28390 | 77.101 | 345 | 71 | 2 | 16 | 360 | 42 | 378 | 0.0 | 515 |
| MS.gene31091.t1 | AT4G28390 | 77.101 | 345 | 71 | 2 | 16 | 360 | 42 | 378 | 0.0 | 515 |
| MS.gene31091.t1 | AT3G08580 | 72.032 | 379 | 79 | 5 | 7 | 361 | 6 | 381 | 0.0 | 515 |
| MS.gene31091.t1 | AT3G08580 | 72.032 | 379 | 79 | 5 | 7 | 361 | 6 | 381 | 0.0 | 515 |
| MS.gene31091.t1 | AT5G17400 | 62.500 | 288 | 108 | 0 | 61 | 348 | 10 | 297 | 1.23e-131 | 379 |
| MS.gene31091.t1 | AT5G56450 | 38.710 | 310 | 171 | 7 | 51 | 348 | 20 | 322 | 3.99e-67 | 215 |
| MS.gene31091.t1 | AT3G55640 | 28.618 | 304 | 200 | 7 | 55 | 349 | 28 | 323 | 1.22e-35 | 132 |
| MS.gene31091.t1 | AT3G55640 | 28.618 | 304 | 200 | 7 | 55 | 349 | 28 | 323 | 1.22e-35 | 132 |
| MS.gene31091.t1 | AT2G37890 | 29.966 | 297 | 191 | 7 | 64 | 351 | 44 | 332 | 7.92e-34 | 128 |
| MS.gene31091.t1 | AT3G53940 | 31.544 | 298 | 183 | 9 | 65 | 351 | 73 | 360 | 3.35e-33 | 127 |
| MS.gene31091.t1 | AT1G14560 | 28.470 | 281 | 175 | 6 | 76 | 340 | 38 | 308 | 1.55e-31 | 122 |
| MS.gene31091.t1 | AT1G14560 | 28.727 | 275 | 170 | 6 | 76 | 334 | 38 | 302 | 6.27e-31 | 119 |
| MS.gene31091.t1 | AT4G26180 | 30.492 | 305 | 186 | 10 | 61 | 351 | 17 | 309 | 7.44e-31 | 120 |
| MS.gene31091.t1 | AT4G01100 | 30.255 | 314 | 162 | 11 | 58 | 335 | 35 | 327 | 1.37e-30 | 119 |
| MS.gene31091.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 148 | 344 | 1.13e-11 | 65.9 |
| MS.gene31091.t1 | AT5G01500 | 32.616 | 279 | 165 | 9 | 76 | 351 | 130 | 388 | 2.12e-30 | 120 |
| MS.gene31091.t1 | AT4G26180 | 31.359 | 287 | 172 | 9 | 61 | 334 | 17 | 291 | 3.95e-30 | 117 |
| MS.gene31091.t1 | AT3G51870 | 32.155 | 283 | 161 | 11 | 76 | 351 | 102 | 360 | 7.14e-29 | 115 |
| MS.gene31091.t1 | AT4G01100 | 29.467 | 319 | 172 | 11 | 58 | 335 | 35 | 341 | 1.48e-28 | 114 |
| MS.gene31091.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 162 | 358 | 1.44e-11 | 65.5 |
| MS.gene31091.t1 | AT4G32400 | 30.605 | 281 | 169 | 10 | 65 | 340 | 114 | 373 | 2.02e-28 | 114 |
| MS.gene31091.t1 | AT4G32400 | 28.571 | 196 | 120 | 5 | 66 | 258 | 208 | 386 | 1.13e-13 | 72.0 |
| MS.gene31091.t1 | AT4G32400 | 28.962 | 183 | 114 | 5 | 170 | 348 | 114 | 284 | 2.88e-12 | 67.8 |
| MS.gene31091.t1 | AT4G01100 | 29.373 | 303 | 157 | 11 | 74 | 340 | 1 | 282 | 4.24e-27 | 109 |
| MS.gene31091.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 98 | 294 | 9.79e-12 | 65.5 |
| MS.gene31091.t1 | AT3G21390 | 28.065 | 310 | 184 | 8 | 68 | 345 | 22 | 324 | 1.70e-24 | 102 |
| MS.gene31091.t1 | AT3G21390 | 28.065 | 310 | 184 | 8 | 68 | 345 | 44 | 346 | 2.64e-24 | 102 |
| MS.gene31091.t1 | AT3G20240 | 24.916 | 297 | 187 | 7 | 62 | 340 | 49 | 327 | 3.40e-24 | 102 |
| MS.gene31091.t1 | AT5G48970 | 27.097 | 310 | 188 | 8 | 68 | 345 | 25 | 328 | 8.49e-24 | 100 |
| MS.gene31091.t1 | AT1G14560 | 30.500 | 200 | 121 | 5 | 169 | 351 | 24 | 222 | 5.12e-23 | 96.7 |
| MS.gene31091.t1 | AT5G51050 | 28.485 | 330 | 199 | 12 | 21 | 340 | 181 | 483 | 1.63e-22 | 99.0 |
| MS.gene31091.t1 | AT3G55640 | 26.961 | 204 | 137 | 3 | 55 | 254 | 28 | 223 | 6.64e-22 | 94.0 |
| MS.gene31091.t1 | AT3G55640 | 26.961 | 204 | 137 | 3 | 55 | 254 | 28 | 223 | 6.64e-22 | 94.0 |
| MS.gene31091.t1 | AT3G53940 | 31.401 | 207 | 126 | 5 | 65 | 265 | 73 | 269 | 1.57e-20 | 90.9 |
| MS.gene31091.t1 | AT5G61810 | 26.335 | 281 | 177 | 8 | 65 | 340 | 65 | 320 | 2.05e-20 | 91.3 |
| MS.gene31091.t1 | AT5G61810 | 26.335 | 281 | 177 | 8 | 65 | 340 | 208 | 463 | 7.16e-20 | 90.9 |
| MS.gene31091.t1 | AT5G48970 | 27.165 | 254 | 154 | 6 | 117 | 345 | 10 | 257 | 2.44e-19 | 87.0 |
| MS.gene31091.t1 | AT3G54110 | 24.759 | 311 | 204 | 9 | 56 | 356 | 6 | 296 | 2.72e-19 | 87.8 |
| MS.gene31091.t1 | AT5G07320 | 25.926 | 270 | 174 | 7 | 74 | 340 | 218 | 464 | 6.62e-19 | 88.2 |
| MS.gene31091.t1 | AT5G58970 | 23.656 | 279 | 198 | 6 | 60 | 333 | 11 | 279 | 2.19e-17 | 82.0 |
| MS.gene31091.t1 | AT5G58970 | 29.949 | 197 | 119 | 6 | 166 | 348 | 12 | 203 | 1.33e-13 | 71.2 |
| MS.gene31091.t1 | AT5G64970 | 26.014 | 296 | 173 | 10 | 68 | 340 | 138 | 410 | 5.93e-16 | 79.0 |
| MS.gene31091.t1 | AT1G79900 | 28.870 | 239 | 147 | 7 | 114 | 345 | 55 | 277 | 2.14e-15 | 76.3 |
| MS.gene31091.t1 | AT1G14140 | 23.704 | 270 | 199 | 4 | 59 | 326 | 10 | 274 | 3.57e-15 | 75.9 |
| MS.gene31091.t1 | AT1G14140 | 28.283 | 198 | 124 | 6 | 170 | 355 | 18 | 209 | 7.99e-13 | 68.9 |
| MS.gene31091.t1 | AT5G64970 | 26.298 | 289 | 167 | 10 | 68 | 333 | 138 | 403 | 3.90e-15 | 76.6 |
| MS.gene31091.t1 | AT5G09470 | 27.727 | 220 | 143 | 6 | 113 | 326 | 97 | 306 | 4.60e-15 | 75.9 |
| MS.gene31091.t1 | AT5G64970 | 26.351 | 296 | 172 | 11 | 68 | 340 | 14 | 286 | 4.75e-15 | 75.5 |
| MS.gene31091.t1 | AT1G78180 | 25.333 | 300 | 170 | 8 | 68 | 340 | 131 | 403 | 2.30e-14 | 74.3 |
| MS.gene31091.t1 | AT4G27940 | 23.438 | 256 | 178 | 6 | 105 | 344 | 146 | 399 | 1.01e-13 | 72.4 |
| MS.gene31091.t1 | AT5G58970 | 29.949 | 197 | 119 | 6 | 166 | 348 | 12 | 203 | 1.10e-13 | 70.9 |
| MS.gene31091.t1 | AT5G66380 | 29.146 | 199 | 119 | 5 | 169 | 355 | 9 | 197 | 1.18e-13 | 71.2 |
| MS.gene31091.t1 | AT4G03115 | 23.592 | 284 | 171 | 9 | 58 | 326 | 31 | 283 | 5.01e-13 | 69.7 |
| MS.gene31091.t1 | AT4G03115 | 23.592 | 284 | 171 | 9 | 58 | 326 | 63 | 315 | 5.65e-13 | 69.7 |
| MS.gene31091.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.10e-12 | 67.4 |
| MS.gene31091.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.10e-12 | 67.4 |
| MS.gene31091.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.10e-12 | 67.4 |
| MS.gene31091.t1 | AT2G22500 | 25.000 | 288 | 179 | 8 | 65 | 326 | 6 | 282 | 3.28e-12 | 67.0 |
| MS.gene31091.t1 | AT2G33820 | 28.571 | 189 | 119 | 6 | 161 | 341 | 13 | 193 | 7.50e-12 | 65.5 |
| MS.gene31091.t1 | AT1G25380 | 22.845 | 232 | 160 | 7 | 116 | 338 | 71 | 292 | 1.11e-11 | 65.9 |
| MS.gene31091.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 183 | 351 | 34 | 204 | 1.63e-11 | 65.5 |
| MS.gene31091.t1 | AT1G25380 | 22.845 | 232 | 160 | 7 | 116 | 338 | 71 | 292 | 1.11e-11 | 65.9 |
| MS.gene31091.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 183 | 351 | 34 | 204 | 1.63e-11 | 65.5 |
| MS.gene31091.t1 | AT2G33820 | 21.382 | 304 | 222 | 7 | 61 | 355 | 14 | 309 | 2.17e-11 | 64.7 |
| MS.gene31091.t1 | AT1G34065 | 22.876 | 306 | 181 | 10 | 38 | 332 | 47 | 308 | 9.56e-11 | 62.8 |
Find 71 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTTTGAAGAGAGATTT+TGG | 0.201047 | 2.4:-5931471 | None:intergenic |
| GTGTACCGTGGTTTGTATTT+TGG | 0.236923 | 2.4:+5930464 | MS.gene31091:CDS |
| GCTCTTGGTAGGAACGTTTC+AGG | 0.238857 | 2.4:+5930511 | MS.gene31091:CDS |
| CTTATGTTGGGAAAGAAATA+TGG | 0.285268 | 2.4:+5931561 | MS.gene31091:CDS |
| TCCACCTTTCTTCGTGGACT+TGG | 0.300851 | 2.4:-5930336 | None:intergenic |
| AAGGGTATTGGAGATTGTTT+TGG | 0.320804 | 2.4:+5929943 | MS.gene31091:CDS |
| CCTCTCTCCACCTTTCTTCG+TGG | 0.345988 | 2.4:-5930342 | None:intergenic |
| AGCAAGAGAGAGATGGATAT+TGG | 0.356655 | 2.4:+5930210 | MS.gene31091:CDS |
| GGCTTCAATGTTTCAGTTGT+TGG | 0.362007 | 2.4:+5930434 | MS.gene31091:CDS |
| TGTAAAGTACAAGAGTTCTT+TGG | 0.375179 | 2.4:+5931416 | MS.gene31091:CDS |
| AAATCAAGATGAGATGATTA+AGG | 0.376906 | 2.4:+5929897 | MS.gene31091:CDS |
| ATGAAGGATTTACTTCGCTT+TGG | 0.383588 | 2.4:+5929980 | MS.gene31091:CDS |
| AGAAGCTTCACGCGCTCAAT+AGG | 0.386608 | 2.4:-5929868 | None:intergenic |
| AACTGTTTCTGAAACAGAAC+AGG | 0.406642 | 2.4:-5929730 | None:intergenic |
| CTTCGAGCAGTTGCTGGTGC+TGG | 0.406961 | 2.4:+5931507 | MS.gene31091:CDS |
| TTCCGTCTTTGTTTACTCGT+TGG | 0.409566 | 2.4:+5930283 | MS.gene31091:CDS |
| TTGCAATCAGATGGTATTGC+TGG | 0.410642 | 2.4:+5930401 | MS.gene31091:CDS |
| AACATTCTTCGAGCAGTTGC+TGG | 0.413671 | 2.4:+5931501 | MS.gene31091:CDS |
| TGCAAGCTATGATAAACTTC+AGG | 0.423170 | 2.4:+5931536 | MS.gene31091:CDS |
| GGAAGAACAGTTAAAGATGA+AGG | 0.423659 | 2.4:+5929964 | MS.gene31091:CDS |
| CCACATATTGCAAATTCCTA+TGG | 0.426920 | 2.4:+5929694 | MS.gene31091:CDS |
| AAACTTCAGGTGCTTATGTT+GGG | 0.430704 | 2.4:+5931549 | MS.gene31091:CDS |
| CCAACAGTAGCACAAAAGTT+TGG | 0.434872 | 2.4:+5929652 | MS.gene31091:CDS |
| TAGCTAGCTTTGCCCTAGGA+TGG | 0.434987 | 2.4:+5931313 | MS.gene31091:CDS |
| GGATATTGGAAAGTCTTTGC+AGG | 0.443053 | 2.4:+5930224 | MS.gene31091:CDS |
| TTCTCTTAAGCCAGTGCTCT+TGG | 0.444590 | 2.4:+5930496 | MS.gene31091:CDS |
| CAACTGTAACAGCCCATCCT+AGG | 0.444717 | 2.4:-5931326 | None:intergenic |
| TCTGAGCCTTACAAGGGTAT+TGG | 0.448802 | 2.4:+5929931 | MS.gene31091:CDS |
| ATTGCATCTGGTGCTGCAGC+AGG | 0.453223 | 2.4:+5930251 | MS.gene31091:CDS |
| TTGGGAAAGAAATATGGTTC+TGG | 0.461893 | 2.4:+5931567 | MS.gene31091:CDS |
| TGGAACAAACACTGCATTTG+AGG | 0.462013 | 2.4:-5929758 | None:intergenic |
| TTTGCAGGAAATATTGCATC+TGG | 0.462558 | 2.4:+5930239 | MS.gene31091:CDS |
| TGGACTTGGCGTCGCTTGCA+AGG | 0.475415 | 2.4:-5930322 | None:intergenic |
| CAATCTCCAATACCCTTGTA+AGG | 0.475979 | 2.4:-5929937 | None:intergenic |
| AGCTAGCTTTGCCCTAGGAT+GGG | 0.478146 | 2.4:+5931314 | MS.gene31091:CDS |
| AAATCTCTCTTCAAAGGTGC+TGG | 0.485223 | 2.4:+5931474 | MS.gene31091:CDS |
| TAAACTTCAGGTGCTTATGT+TGG | 0.486307 | 2.4:+5931548 | MS.gene31091:CDS |
| CCATAGGAATTTGCAATATG+TGG | 0.487479 | 2.4:-5929694 | None:intergenic |
| CATTGATGATGGCTGATAAG+AGG | 0.495678 | 2.4:+5929620 | None:intergenic |
| GACGCCAAGTCCACGAAGAA+AGG | 0.496546 | 2.4:+5930332 | MS.gene31091:CDS |
| TTTGTGCTACTGTTGGGCAT+TGG | 0.506114 | 2.4:-5929645 | None:intergenic |
| TTCCTAGCTAGCTTTGCCCT+AGG | 0.508251 | 2.4:+5931309 | MS.gene31091:CDS |
| TAGGCTCTCTGAGCCTTACA+AGG | 0.509331 | 2.4:+5929924 | MS.gene31091:CDS |
| AGAAGAATGATGATGACATC+AGG | 0.514497 | 2.4:+5931387 | MS.gene31091:CDS |
| ATTTGAAAGGAAACCTGTGT+TGG | 0.521968 | 2.4:-5930036 | None:intergenic |
| TCACAAATTGTGAAAACTGA+AGG | 0.528718 | 2.4:+5931447 | MS.gene31091:CDS |
| CTTCTACGAACAGTGTCTAA+AGG | 0.537254 | 2.4:-5931369 | None:intergenic |
| ATCCTAGGGCAAAGCTAGCT+AGG | 0.537911 | 2.4:-5931311 | None:intergenic |
| CTTAAGCCAGTGCTCTTGGT+AGG | 0.545019 | 2.4:+5930500 | MS.gene31091:CDS |
| GGTCCAAAATCTCTCTTCAA+AGG | 0.557932 | 2.4:+5931468 | MS.gene31091:CDS |
| CAAGATGAGATGATTAAGGC+TGG | 0.558576 | 2.4:+5929901 | MS.gene31091:CDS |
| GGTGGAGAGAGGCAATTCAA+TGG | 0.564939 | 2.4:+5930353 | MS.gene31091:CDS |
| AACTTCAAGCAAGAGAGAGA+TGG | 0.570273 | 2.4:+5930203 | MS.gene31091:CDS |
| CTAGGATGGGCTGTTACAGT+TGG | 0.574759 | 2.4:+5931327 | MS.gene31091:CDS |
| CATATTGCAAATTCCTATGG+AGG | 0.577721 | 2.4:+5929697 | MS.gene31091:CDS |
| GGAAAGAAATATGGTTCTGG+TGG | 0.583008 | 2.4:+5931570 | MS.gene31091:CDS |
| AAACCTGTGTTGGAAAGTAA+CGG | 0.584984 | 2.4:-5930026 | None:intergenic |
| ATGAGATGATTAAGGCTGGT+AGG | 0.586726 | 2.4:+5929905 | MS.gene31091:CDS |
| AAGAAGACATTGCAATCAGA+TGG | 0.590470 | 2.4:+5930392 | MS.gene31091:CDS |
| AACTGTAACAGCCCATCCTA+GGG | 0.595417 | 2.4:-5931325 | None:intergenic |
| GGATTTACTTCGCTTTGGAG+AGG | 0.595722 | 2.4:+5929985 | MS.gene31091:CDS |
| AAAGTAACGGATAACATTGA+CGG | 0.603182 | 2.4:-5930013 | None:intergenic |
| GCCAAGTCCACGAAGAAAGG+TGG | 0.603618 | 2.4:+5930335 | MS.gene31091:CDS |
| GGTATTGCTGGTCTTTATCG+CGG | 0.608830 | 2.4:+5930413 | MS.gene31091:CDS |
| AACGTTCCTACCAAGAGCAC+TGG | 0.609300 | 2.4:-5930506 | None:intergenic |
| ATCCAACGAGTAAACAAAGA+CGG | 0.620833 | 2.4:-5930285 | None:intergenic |
| TATCCGTTACTTTCCAACAC+AGG | 0.620843 | 2.4:+5930023 | MS.gene31091:CDS |
| CCACGAAGAAAGGTGGAGAG+AGG | 0.629455 | 2.4:+5930342 | MS.gene31091:CDS |
| ACAGTCCAAAATACAAACCA+CGG | 0.665396 | 2.4:-5930469 | None:intergenic |
| GTTGGAATCATTGTGTACCG+TGG | 0.672437 | 2.4:+5930452 | MS.gene31091:CDS |
| AGGCTCTCTGAGCCTTACAA+GGG | 0.675743 | 2.4:+5929925 | MS.gene31091:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTAAAATATTGGTA+GGG | + | chr2.4:5931065-5931084 | MS.gene31091:intron | 10.0% |
| !!! | ATATTATTTTACAAAATATC+AGG | + | chr2.4:5931281-5931300 | MS.gene31091:intron | 10.0% |
| !! | TATATTAAAAAGTAGAAAAC+CGG | + | chr2.4:5930942-5930961 | MS.gene31091:intron | 15.0% |
| !!! | AATTTTTAAAATATTGGTAG+GGG | + | chr2.4:5931066-5931085 | MS.gene31091:intron | 15.0% |
| !!! | CAAATTTTTAAAATATTGGT+AGG | + | chr2.4:5931064-5931083 | MS.gene31091:intron | 15.0% |
| !!! | TCGTCAAATTTTTAAAATAT+TGG | + | chr2.4:5931060-5931079 | MS.gene31091:intron | 15.0% |
| !! | AAAGAGAAAAAAGTTAGTTA+AGG | + | chr2.4:5930705-5930724 | MS.gene31091:intron | 20.0% |
| !! | AATTTGACGAAACAAAAATT+TGG | - | chr2.4:5931050-5931069 | None:intergenic | 20.0% |
| !! | TAACATGATTAATCTATTAC+AGG | + | chr2.4:5930139-5930158 | MS.gene31091:intron | 20.0% |
| !!! | ACTGCATTAATTATTTCTTT+AGG | + | chr2.4:5930064-5930083 | MS.gene31091:intron | 20.0% |
| ! | AAATCAAGATGAGATGATTA+AGG | + | chr2.4:5929897-5929916 | MS.gene31091:CDS | 25.0% |
| ! | AATCAGAATGTGTTACAATT+AGG | + | chr2.4:5931002-5931021 | MS.gene31091:intron | 25.0% |
| ! | AATGCAGTTGAAAATTTGAA+AGG | - | chr2.4:5930052-5930071 | None:intergenic | 25.0% |
| ! | AGATTAATCATGTTAGACAT+TGG | - | chr2.4:5930134-5930153 | None:intergenic | 25.0% |
| ! | CGAAAATGTAATTTAGACAT+TGG | - | chr2.4:5930090-5930109 | None:intergenic | 25.0% |
| !!! | CGATGTTTTAAAATCCAAAT+CGG | + | chr2.4:5930828-5930847 | MS.gene31091:intron | 25.0% |
| !!! | TATTTTAGAGCAGCAAATTT+TGG | - | chr2.4:5931264-5931283 | None:intergenic | 25.0% |
| ACTGTAGTTGAACTATGATT+AGG | - | chr2.4:5930874-5930893 | None:intergenic | 30.0% | |
| AGATTGTCTTACTATGGATT+TGG | + | chr2.4:5930599-5930618 | MS.gene31091:intron | 30.0% | |
| ATATTCACTCATAAGTGAGT+AGG | + | chr2.4:5930802-5930821 | MS.gene31091:intron | 30.0% | |
| CCATAGTAAGACAATCTTTA+AGG | - | chr2.4:5930596-5930615 | None:intergenic | 30.0% | |
| CCTCTTCTATTTATCCTTTA+AGG | - | chr2.4:5930674-5930693 | None:intergenic | 30.0% | |
| CCTTAAAGATTGTCTTACTA+TGG | + | chr2.4:5930593-5930612 | MS.gene31091:intron | 30.0% | |
| CCTTAAAGGATAAATAGAAG+AGG | + | chr2.4:5930671-5930690 | MS.gene31091:intron | 30.0% | |
| CTTATGTTGGGAAAGAAATA+TGG | + | chr2.4:5931561-5931580 | MS.gene31091:CDS | 30.0% | |
| TAACCTTATGAATTGCATAG+CGG | + | chr2.4:5931129-5931148 | MS.gene31091:intron | 30.0% | |
| TATTCACTCATAAGTGAGTA+GGG | + | chr2.4:5930803-5930822 | MS.gene31091:intron | 30.0% | |
| TCACAAATTGTGAAAACTGA+AGG | + | chr2.4:5931447-5931466 | MS.gene31091:CDS | 30.0% | |
| TGTAAAGTACAAGAGTTCTT+TGG | + | chr2.4:5931416-5931435 | MS.gene31091:CDS | 30.0% | |
| ! | AATTGTGTCAACATTTTCGA+CGG | - | chr2.4:5931177-5931196 | None:intergenic | 30.0% |
| ! | GATGAAGATTTTGAACATGA+CGG | + | chr2.4:5930727-5930746 | MS.gene31091:intron | 30.0% |
| !! | AAAGTAACGGATAACATTGA+CGG | - | chr2.4:5930016-5930035 | None:intergenic | 30.0% |
| AAACCTGTGTTGGAAAGTAA+CGG | - | chr2.4:5930029-5930048 | None:intergenic | 35.0% | |
| AAACTTCAGGTGCTTATGTT+GGG | + | chr2.4:5931549-5931568 | MS.gene31091:CDS | 35.0% | |
| AAGAAGACATTGCAATCAGA+TGG | + | chr2.4:5930392-5930411 | MS.gene31091:CDS | 35.0% | |
| ACAGTCCAAAATACAAACCA+CGG | - | chr2.4:5930472-5930491 | None:intergenic | 35.0% | |
| ACCAATACGCAGAAAAAATG+TGG | + | chr2.4:5930638-5930657 | MS.gene31091:intron | 35.0% | |
| ATCCAACGAGTAAACAAAGA+CGG | - | chr2.4:5930288-5930307 | None:intergenic | 35.0% | |
| ATGAAGGATTTACTTCGCTT+TGG | + | chr2.4:5929980-5929999 | MS.gene31091:CDS | 35.0% | |
| ATTCACTCATAAGTGAGTAG+GGG | + | chr2.4:5930804-5930823 | MS.gene31091:intron | 35.0% | |
| ATTTGAAAGGAAACCTGTGT+TGG | - | chr2.4:5930039-5930058 | None:intergenic | 35.0% | |
| CACTAGTTCAATTTCCGATT+TGG | - | chr2.4:5930845-5930864 | None:intergenic | 35.0% | |
| CATATTGCAAATTCCTATGG+AGG | + | chr2.4:5929697-5929716 | MS.gene31091:CDS | 35.0% | |
| CCAATACGCAGAAAAAATGT+GGG | + | chr2.4:5930639-5930658 | MS.gene31091:intron | 35.0% | |
| CCACATATTGCAAATTCCTA+TGG | + | chr2.4:5929694-5929713 | MS.gene31091:CDS | 35.0% | |
| CCATAGGAATTTGCAATATG+TGG | - | chr2.4:5929697-5929716 | None:intergenic | 35.0% | |
| GGAAGAACAGTTAAAGATGA+AGG | + | chr2.4:5929964-5929983 | MS.gene31091:CDS | 35.0% | |
| GTAACACATTCTGATTGAAC+CGG | - | chr2.4:5930998-5931017 | None:intergenic | 35.0% | |
| GTAGTTGAACTATGATTAGG+AGG | - | chr2.4:5930871-5930890 | None:intergenic | 35.0% | |
| GTCGAAAATGTTGACACAAT+TGG | + | chr2.4:5931176-5931195 | MS.gene31091:intron | 35.0% | |
| TAAACTTCAGGTGCTTATGT+TGG | + | chr2.4:5931548-5931567 | MS.gene31091:CDS | 35.0% | |
| TGCAAGCTATGATAAACTTC+AGG | + | chr2.4:5931536-5931555 | MS.gene31091:CDS | 35.0% | |
| TGTTGACACAATTGGAGTAT+TGG | + | chr2.4:5931184-5931203 | MS.gene31091:intron | 35.0% | |
| TTGGGAAAGAAATATGGTTC+TGG | + | chr2.4:5931567-5931586 | MS.gene31091:CDS | 35.0% | |
| TTTCCGCTATGCAATTCATA+AGG | - | chr2.4:5931135-5931154 | None:intergenic | 35.0% | |
| TTTGCAGGAAATATTGCATC+TGG | + | chr2.4:5930239-5930258 | MS.gene31091:CDS | 35.0% | |
| ! | AAGTTTTTCTCTGATGGAGA+TGG | - | chr2.4:5929781-5929800 | None:intergenic | 35.0% |
| ! | AGAAGAATGATGATGACATC+AGG | + | chr2.4:5931387-5931406 | MS.gene31091:CDS | 35.0% |
| ! | CGCTTTGTTGTGTGTTAATT+AGG | + | chr2.4:5930108-5930127 | MS.gene31091:intron | 35.0% |
| ! | CTTGCAAAGTTTTTCTCTGA+TGG | - | chr2.4:5929787-5929806 | None:intergenic | 35.0% |
| !! | AACTGTTTCTGAAACAGAAC+AGG | - | chr2.4:5929733-5929752 | None:intergenic | 35.0% |
| !! | CAAACTTTTGTGCTACTGTT+GGG | - | chr2.4:5929654-5929673 | None:intergenic | 35.0% |
| !! | TGAAGTCTTGTTTGTTCAAC+CGG | - | chr2.4:5930964-5930983 | None:intergenic | 35.0% |
| !! | TTTGCGACTGATTTTCTCAT+GGG | + | chr2.4:5929808-5929827 | MS.gene31091:CDS | 35.0% |
| !!! | AAGGGTATTGGAGATTGTTT+TGG | + | chr2.4:5929943-5929962 | MS.gene31091:CDS | 35.0% |
| AACTTCAAGCAAGAGAGAGA+TGG | + | chr2.4:5930203-5930222 | MS.gene31091:CDS | 40.0% | |
| AATTTGGACAGATCGCTGTT+TGG | - | chr2.4:5931034-5931053 | None:intergenic | 40.0% | |
| AGACTTCAACCAGTTCAATC+CGG | + | chr2.4:5930976-5930995 | MS.gene31091:intron | 40.0% | |
| AGCAAGAGAGAGATGGATAT+TGG | + | chr2.4:5930210-5930229 | MS.gene31091:CDS | 40.0% | |
| ATACGCAGAAAAAATGTGGG+AGG | + | chr2.4:5930642-5930661 | MS.gene31091:intron | 40.0% | |
| ATGAGATGATTAAGGCTGGT+AGG | + | chr2.4:5929905-5929924 | MS.gene31091:CDS | 40.0% | |
| CAAGATGAGATGATTAAGGC+TGG | + | chr2.4:5929901-5929920 | MS.gene31091:CDS | 40.0% | |
| CAATCTCCAATACCCTTGTA+AGG | - | chr2.4:5929940-5929959 | None:intergenic | 40.0% | |
| CCAACAGTAGCACAAAAGTT+TGG | + | chr2.4:5929652-5929671 | MS.gene31091:CDS | 40.0% | |
| CTTCTACGAACAGTGTCTAA+AGG | - | chr2.4:5931372-5931391 | None:intergenic | 40.0% | |
| GGATATTGGAAAGTCTTTGC+AGG | + | chr2.4:5930224-5930243 | MS.gene31091:CDS | 40.0% | |
| GGCTTCAATGTTTCAGTTGT+TGG | + | chr2.4:5930434-5930453 | MS.gene31091:CDS | 40.0% | |
| GGTCCAAAATCTCTCTTCAA+AGG | + | chr2.4:5931468-5931487 | MS.gene31091:CDS | 40.0% | |
| TGGAACAAACACTGCATTTG+AGG | - | chr2.4:5929761-5929780 | None:intergenic | 40.0% | |
| TTGCAATCAGATGGTATTGC+TGG | + | chr2.4:5930401-5930420 | MS.gene31091:CDS | 40.0% | |
| ! | AAATCTCTCTTCAAAGGTGC+TGG | + | chr2.4:5931474-5931493 | MS.gene31091:CDS | 40.0% |
| ! | AGGTTTTTCTGAACCTCCAT+AGG | - | chr2.4:5929713-5929732 | None:intergenic | 40.0% |
| ! | GTGGGAGGTTTTTACCTTAA+AGG | + | chr2.4:5930657-5930676 | MS.gene31091:intron | 40.0% |
| ! | TATCCGTTACTTTCCAACAC+AGG | + | chr2.4:5930023-5930042 | MS.gene31091:CDS | 40.0% |
| ! | TTCCGTCTTTGTTTACTCGT+TGG | + | chr2.4:5930283-5930302 | MS.gene31091:CDS | 40.0% |
| !! | CCAAACTTTTGTGCTACTGT+TGG | - | chr2.4:5929655-5929674 | None:intergenic | 40.0% |
| !! | CTTTGCGACTGATTTTCTCA+TGG | + | chr2.4:5929807-5929826 | MS.gene31091:CDS | 40.0% |
| !! | GCACCTTTGAAGAGAGATTT+TGG | - | chr2.4:5931474-5931493 | None:intergenic | 40.0% |
| !! | GGAAAGAAATATGGTTCTGG+TGG | + | chr2.4:5931570-5931589 | MS.gene31091:CDS | 40.0% |
| !! | GTGTACCGTGGTTTGTATTT+TGG | + | chr2.4:5930464-5930483 | MS.gene31091:CDS | 40.0% |
| !!! | CCCACATTTTTTCTGCGTAT+TGG | - | chr2.4:5930642-5930661 | None:intergenic | 40.0% |
| !!! | CGTATTGGTTTTGACATGAG+AGG | - | chr2.4:5930627-5930646 | None:intergenic | 40.0% |
| AACATTCTTCGAGCAGTTGC+TGG | + | chr2.4:5931501-5931520 | MS.gene31091:CDS | 45.0% | |
| AACTGTAACAGCCCATCCTA+GGG | - | chr2.4:5931328-5931347 | None:intergenic | 45.0% | |
| CTGATTGAACCGGATTGAAC+TGG | - | chr2.4:5930988-5931007 | None:intergenic | 45.0% | |
| GGTAGGGGCAGATTAAATCA+TGG | + | chr2.4:5931081-5931100 | MS.gene31091:intron | 45.0% | |
| GTTGGAATCATTGTGTACCG+TGG | + | chr2.4:5930452-5930471 | MS.gene31091:CDS | 45.0% | |
| TTCTCTTAAGCCAGTGCTCT+TGG | + | chr2.4:5930496-5930515 | MS.gene31091:CDS | 45.0% | |
| ! | CAACATTTTCGACGGTAGAG+TGG | - | chr2.4:5931169-5931188 | None:intergenic | 45.0% |
| ! | GAACGTTTCAGGTAAGAGTG+AGG | + | chr2.4:5930522-5930541 | MS.gene31091:intron | 45.0% |
| ! | TCTGAGCCTTACAAGGGTAT+TGG | + | chr2.4:5929931-5929950 | MS.gene31091:CDS | 45.0% |
| ! | TTTGTGCTACTGTTGGGCAT+TGG | - | chr2.4:5929648-5929667 | None:intergenic | 45.0% |
| !! | GGATTTACTTCGCTTTGGAG+AGG | + | chr2.4:5929985-5930004 | MS.gene31091:CDS | 45.0% |
| !! | GGTATTGCTGGTCTTTATCG+CGG | + | chr2.4:5930413-5930432 | MS.gene31091:CDS | 45.0% |
| AGAAGCTTCACGCGCTCAAT+AGG | - | chr2.4:5929871-5929890 | None:intergenic | 50.0% | |
| AGGCTCTCTGAGCCTTACAA+GGG | + | chr2.4:5929925-5929944 | MS.gene31091:CDS | 50.0% | |
| ATCCTAGGGCAAAGCTAGCT+AGG | - | chr2.4:5931314-5931333 | None:intergenic | 50.0% | |
| CAACTGTAACAGCCCATCCT+AGG | - | chr2.4:5931329-5931348 | None:intergenic | 50.0% | |
| CTTAAGCCAGTGCTCTTGGT+AGG | + | chr2.4:5930500-5930519 | MS.gene31091:CDS | 50.0% | |
| GCTCTTGGTAGGAACGTTTC+AGG | + | chr2.4:5930511-5930530 | MS.gene31091:CDS | 50.0% | |
| GGTGGAGAGAGGCAATTCAA+TGG | + | chr2.4:5930353-5930372 | MS.gene31091:CDS | 50.0% | |
| TAGGCTCTCTGAGCCTTACA+AGG | + | chr2.4:5929924-5929943 | MS.gene31091:CDS | 50.0% | |
| TCCACCTTTCTTCGTGGACT+TGG | - | chr2.4:5930339-5930358 | None:intergenic | 50.0% | |
| ! | AACGTTCCTACCAAGAGCAC+TGG | - | chr2.4:5930509-5930528 | None:intergenic | 50.0% |
| !! | AGCTAGCTTTGCCCTAGGAT+GGG | + | chr2.4:5931314-5931333 | MS.gene31091:CDS | 50.0% |
| !! | CTAGGATGGGCTGTTACAGT+TGG | + | chr2.4:5931327-5931346 | MS.gene31091:CDS | 50.0% |
| !! | GCGACTGATTTTCTCATGGG+TGG | + | chr2.4:5929811-5929830 | MS.gene31091:CDS | 50.0% |
| !! | TAGCTAGCTTTGCCCTAGGA+TGG | + | chr2.4:5931313-5931332 | MS.gene31091:CDS | 50.0% |
| !! | TTCCTAGCTAGCTTTGCCCT+AGG | + | chr2.4:5931309-5931328 | MS.gene31091:CDS | 50.0% |
| CCACGAAGAAAGGTGGAGAG+AGG | + | chr2.4:5930342-5930361 | MS.gene31091:CDS | 55.0% | |
| CCTCTCTCCACCTTTCTTCG+TGG | - | chr2.4:5930345-5930364 | None:intergenic | 55.0% | |
| GACGCCAAGTCCACGAAGAA+AGG | + | chr2.4:5930332-5930351 | MS.gene31091:CDS | 55.0% | |
| GCCAAGTCCACGAAGAAAGG+TGG | + | chr2.4:5930335-5930354 | MS.gene31091:CDS | 55.0% | |
| TTCGACGGTAGAGTGGCTTG+AGG | - | chr2.4:5931162-5931181 | None:intergenic | 55.0% | |
| !! | ATTGCATCTGGTGCTGCAGC+AGG | + | chr2.4:5930251-5930270 | MS.gene31091:CDS | 55.0% |
| CTTCGAGCAGTTGCTGGTGC+TGG | + | chr2.4:5931507-5931526 | MS.gene31091:CDS | 60.0% | |
| TGGACTTGGCGTCGCTTGCA+AGG | - | chr2.4:5930325-5930344 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 5929628 | 5931599 | 5929628 | ID=MS.gene31091 |
| chr2.4 | mRNA | 5929628 | 5931599 | 5929628 | ID=MS.gene31091.t1;Parent=MS.gene31091 |
| chr2.4 | exon | 5929628 | 5930044 | 5929628 | ID=MS.gene31091.t1.exon1;Parent=MS.gene31091.t1 |
| chr2.4 | CDS | 5929628 | 5930044 | 5929628 | ID=cds.MS.gene31091.t1;Parent=MS.gene31091.t1 |
| chr2.4 | exon | 5930161 | 5930532 | 5930161 | ID=MS.gene31091.t1.exon2;Parent=MS.gene31091.t1 |
| chr2.4 | CDS | 5930161 | 5930532 | 5930161 | ID=cds.MS.gene31091.t1;Parent=MS.gene31091.t1 |
| chr2.4 | exon | 5931303 | 5931599 | 5931303 | ID=MS.gene31091.t1.exon3;Parent=MS.gene31091.t1 |
| chr2.4 | CDS | 5931303 | 5931599 | 5931303 | ID=cds.MS.gene31091.t1;Parent=MS.gene31091.t1 |
| Gene Sequence |
| Protein sequence |
