Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31909.t1 | XP_013466742.1 | 97.8 | 372 | 8 | 0 | 1 | 372 | 67 | 438 | 3.40E-207 | 730.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31909.t1 | Q9M3B4 | 54.6 | 377 | 155 | 5 | 1 | 370 | 69 | 436 | 2.2e-109 | 397.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31909.t1 | A0A072VH71 | 97.8 | 372 | 8 | 0 | 1 | 372 | 67 | 438 | 2.5e-207 | 730.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31909 | MS.gene64891 | PPI |
| MS.gene31909 | MS.gene004849 | PPI |
| MS.gene31909 | MS.gene53503 | PPI |
| MS.gene72659 | MS.gene31909 | PPI |
| MS.gene31909 | MS.gene85555 | PPI |
| MS.gene31909 | MS.gene86544 | PPI |
| MS.gene066499 | MS.gene31909 | PPI |
| MS.gene31909 | MS.gene002713 | PPI |
| MS.gene47936 | MS.gene31909 | PPI |
| MS.gene31909 | MS.gene52951 | PPI |
| MS.gene31909 | MS.gene07384 | PPI |
| MS.gene31909 | MS.gene27974 | PPI |
| MS.gene31909 | MS.gene65332 | PPI |
| MS.gene31909 | MS.gene030899 | PPI |
| MS.gene99555 | MS.gene31909 | PPI |
| MS.gene31909 | MS.gene05830 | PPI |
| MS.gene31909 | MS.gene004394 | PPI |
| MS.gene31909 | MS.gene69969 | PPI |
| MS.gene23814 | MS.gene31909 | PPI |
| MS.gene31909 | MS.gene96258 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31909.t1 | MTR_1g034785 | 97.849 | 372 | 8 | 0 | 1 | 372 | 67 | 438 | 0.0 | 753 |
| MS.gene31909.t1 | MTR_7g016970 | 70.509 | 373 | 106 | 3 | 1 | 371 | 70 | 440 | 0.0 | 539 |
| MS.gene31909.t1 | MTR_4g103760 | 35.540 | 287 | 167 | 6 | 1 | 282 | 77 | 350 | 5.49e-53 | 182 |
| MS.gene31909.t1 | MTR_8g054430 | 27.720 | 386 | 211 | 12 | 11 | 379 | 78 | 412 | 3.88e-30 | 120 |
| MS.gene31909.t1 | MTR_4g119620 | 26.068 | 234 | 143 | 7 | 12 | 239 | 80 | 289 | 1.62e-16 | 80.1 |
| MS.gene31909.t1 | MTR_1g072140 | 25.751 | 233 | 149 | 6 | 10 | 239 | 69 | 280 | 1.62e-16 | 80.1 |
| MS.gene31909.t1 | MTR_1g072140 | 25.616 | 203 | 111 | 7 | 51 | 244 | 26 | 197 | 5.47e-11 | 63.5 |
| MS.gene31909.t1 | MTR_7g076230 | 29.004 | 231 | 135 | 7 | 3 | 228 | 319 | 525 | 3.55e-15 | 77.8 |
| MS.gene31909.t1 | MTR_1g054300 | 27.536 | 276 | 133 | 13 | 16 | 248 | 167 | 418 | 7.49e-14 | 73.2 |
| MS.gene31909.t1 | MTR_4g007500 | 28.090 | 178 | 115 | 4 | 47 | 223 | 193 | 358 | 9.22e-14 | 72.4 |
| MS.gene31909.t1 | MTR_4g104380 | 22.727 | 220 | 148 | 3 | 20 | 239 | 240 | 437 | 1.06e-13 | 72.8 |
| MS.gene31909.t1 | MTR_2g436510 | 22.523 | 222 | 147 | 7 | 11 | 231 | 213 | 410 | 2.34e-13 | 71.6 |
| MS.gene31909.t1 | MTR_1g021590 | 32.086 | 187 | 95 | 8 | 48 | 227 | 215 | 376 | 2.85e-12 | 68.2 |
| MS.gene31909.t1 | MTR_2g034500 | 27.053 | 207 | 119 | 10 | 39 | 229 | 228 | 418 | 4.94e-12 | 68.2 |
| MS.gene31909.t1 | MTR_1g072740 | 24.868 | 189 | 116 | 5 | 43 | 227 | 284 | 450 | 7.31e-12 | 67.0 |
| MS.gene31909.t1 | MTR_4g102520 | 24.868 | 189 | 116 | 5 | 43 | 227 | 285 | 451 | 1.10e-11 | 66.6 |
| MS.gene31909.t1 | MTR_3g110185 | 30.481 | 187 | 100 | 11 | 49 | 227 | 191 | 355 | 1.35e-11 | 66.6 |
| MS.gene31909.t1 | MTR_1g087120 | 25.116 | 215 | 126 | 6 | 39 | 233 | 313 | 512 | 2.43e-11 | 66.2 |
| MS.gene31909.t1 | MTR_8g092890 | 26.601 | 203 | 119 | 6 | 38 | 229 | 219 | 402 | 2.70e-11 | 65.5 |
| MS.gene31909.t1 | MTR_4g105700 | 24.786 | 234 | 155 | 7 | 25 | 253 | 420 | 637 | 3.63e-11 | 65.5 |
| MS.gene31909.t1 | MTR_4g106480 | 26.848 | 257 | 136 | 10 | 48 | 292 | 176 | 392 | 4.37e-11 | 64.3 |
| MS.gene31909.t1 | MTR_7g086360 | 22.358 | 246 | 171 | 6 | 12 | 254 | 100 | 328 | 9.21e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31909.t1 | AT3G49180 | 54.642 | 377 | 155 | 5 | 1 | 370 | 69 | 436 | 1.23e-141 | 410 |
| MS.gene31909.t1 | AT4G02730 | 23.611 | 288 | 170 | 9 | 12 | 260 | 45 | 321 | 7.37e-14 | 72.4 |
| MS.gene31909.t1 | AT1G15440 | 26.749 | 243 | 150 | 7 | 3 | 240 | 299 | 518 | 1.71e-13 | 72.4 |
| MS.gene31909.t1 | AT1G15440 | 26.749 | 243 | 150 | 7 | 3 | 240 | 339 | 558 | 1.88e-13 | 72.4 |
| MS.gene31909.t1 | AT2G47410 | 28.319 | 226 | 130 | 10 | 39 | 252 | 41 | 246 | 2.03e-13 | 72.4 |
| MS.gene31909.t1 | AT2G47410 | 28.319 | 226 | 130 | 10 | 39 | 252 | 222 | 427 | 2.22e-13 | 72.4 |
| MS.gene31909.t1 | AT2G47410 | 28.319 | 226 | 130 | 10 | 39 | 252 | 223 | 428 | 2.22e-13 | 72.4 |
| MS.gene31909.t1 | AT4G15900 | 22.072 | 222 | 148 | 7 | 11 | 231 | 219 | 416 | 2.74e-13 | 71.6 |
| MS.gene31909.t1 | AT2G47410 | 27.197 | 239 | 126 | 10 | 39 | 252 | 41 | 256 | 2.91e-13 | 72.0 |
| MS.gene31909.t1 | AT2G47410 | 27.197 | 239 | 126 | 10 | 39 | 252 | 41 | 256 | 2.91e-13 | 72.0 |
| MS.gene31909.t1 | AT2G47410 | 27.197 | 239 | 126 | 10 | 39 | 252 | 223 | 438 | 3.44e-13 | 72.0 |
| MS.gene31909.t1 | AT3G50390 | 33.690 | 187 | 86 | 8 | 51 | 227 | 210 | 368 | 5.20e-13 | 70.5 |
| MS.gene31909.t1 | AT3G49660 | 22.794 | 272 | 169 | 9 | 5 | 268 | 64 | 302 | 3.01e-12 | 67.4 |
| MS.gene31909.t1 | AT3G49660 | 26.339 | 224 | 123 | 8 | 19 | 230 | 122 | 315 | 1.60e-11 | 65.1 |
| MS.gene31909.t1 | AT5G50230 | 22.936 | 218 | 145 | 4 | 22 | 239 | 238 | 432 | 4.56e-12 | 67.8 |
| MS.gene31909.t1 | AT1G24130 | 29.189 | 185 | 107 | 8 | 48 | 227 | 188 | 353 | 6.01e-12 | 67.0 |
| MS.gene31909.t1 | AT3G18130 | 24.675 | 231 | 146 | 6 | 13 | 239 | 66 | 272 | 2.78e-11 | 64.7 |
Find 81 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATGGCATGCTCATTTA+AGG | 0.127870 | 1.4:+19711243 | MS.gene31909:CDS |
| GGTGGGAATTTGTTAATTTC+TGG | 0.180820 | 1.4:+19712638 | MS.gene31909:CDS |
| TATGAGAACTTGCACGAATT+TGG | 0.227639 | 1.4:+19714361 | MS.gene31909:CDS |
| TTTGATATCTAATCACATTA+AGG | 0.305058 | 1.4:+19713949 | MS.gene31909:CDS |
| TAATCACATTAAGGAGCTTC+AGG | 0.315950 | 1.4:+19713958 | MS.gene31909:CDS |
| AGTAATTAATGCCATTGTAT+TGG | 0.322714 | 1.4:+19712360 | MS.gene31909:CDS |
| CTTGCACGAATTTGGTATAA+AGG | 0.332053 | 1.4:+19714369 | MS.gene31909:CDS |
| GTGGGAATTTGTTAATTTCT+GGG | 0.342559 | 1.4:+19712639 | MS.gene31909:CDS |
| GATGACTCACTGCTGATATC+TGG | 0.365366 | 1.4:+19711293 | MS.gene31909:CDS |
| ATTTGGTATAAAGGAGCTAT+TGG | 0.374097 | 1.4:+19714378 | MS.gene31909:CDS |
| ACAACAATAATATTAGTTAT+AGG | 0.381277 | 1.4:-19713743 | None:intergenic |
| TAGCCATCTCCATTGTCCTT+TGG | 0.382041 | 1.4:-19714321 | None:intergenic |
| AGGATGGAATAGTTCGTGTT+TGG | 0.400519 | 1.4:+19712666 | MS.gene31909:CDS |
| ATAAGACCCATGTTTCTTTG+TGG | 0.415726 | 1.4:-19713816 | None:intergenic |
| GTTATTTGTAAGGTTGAAAC+TGG | 0.425566 | 1.4:+19711209 | MS.gene31909:intron |
| GAAATGGCATGCTCATTTAA+GGG | 0.426589 | 1.4:+19711244 | MS.gene31909:CDS |
| CTATCAACCTAGGTGGTAGC+AGG | 0.432204 | 1.4:+19713894 | MS.gene31909:CDS |
| AAGATGGATATGTACGAGTT+TGG | 0.433340 | 1.4:+19711321 | MS.gene31909:CDS |
| TTAGAAGATGTATGATTGCT+TGG | 0.434199 | 1.4:-19713782 | None:intergenic |
| CTGATATCTGGTTCTGAAGA+TGG | 0.441099 | 1.4:+19711305 | MS.gene31909:CDS |
| GTCCGGTGATATATACTTGT+GGG | 0.442984 | 1.4:+19709998 | MS.gene31909:CDS |
| ATCACTACTACTGATAATCA+TGG | 0.447874 | 1.4:+19712457 | MS.gene31909:CDS |
| CTGGCAGATTGCTTAAGAAA+TGG | 0.457303 | 1.4:+19711228 | MS.gene31909:CDS |
| ATCAGACGATCGGACGTGTA+AGG | 0.460520 | 1.4:+19711816 | MS.gene31909:CDS |
| CTCCATCTCGATTTCAGAAG+CGG | 0.472217 | 1.4:-19714281 | None:intergenic |
| CTAGTTGGCGGAGCTTTGTC+CGG | 0.476553 | 1.4:+19709981 | MS.gene31909:CDS |
| TTAATTTCTGGGTCTGAGGA+TGG | 0.480417 | 1.4:+19712650 | MS.gene31909:CDS |
| TAGAAGATGTATGATTGCTT+GGG | 0.481285 | 1.4:-19713781 | None:intergenic |
| TTTAAGGGCAGTCACTTGCC+TGG | 0.487279 | 1.4:+19711259 | MS.gene31909:CDS |
| AATCATGGGATGCATATCAT+TGG | 0.503524 | 1.4:+19712472 | MS.gene31909:CDS |
| ACTGATGTTGTGATTGGTAA+TGG | 0.514197 | 1.4:+19711766 | MS.gene31909:CDS |
| CGCATGTTTAAACATGCTAA+AGG | 0.517084 | 1.4:+19712713 | MS.gene31909:CDS |
| CGCGTAACTGATGTTGTGAT+TGG | 0.519045 | 1.4:+19711760 | MS.gene31909:CDS |
| AGGTGGTAGCAGGGGATGCA+TGG | 0.521018 | 1.4:+19713904 | MS.gene31909:CDS |
| TTATTTGTCATCTTCATCGA+AGG | 0.524621 | 1.4:-19714419 | None:intergenic |
| CCCCTTGCTGCTAATCATCA+AGG | 0.525393 | 1.4:+19709951 | MS.gene31909:CDS |
| GCATAAAACACATGTTCAGC+TGG | 0.526050 | 1.4:-19712385 | None:intergenic |
| CAAGCATCCACAAAGAAACA+TGG | 0.526450 | 1.4:+19713809 | MS.gene31909:CDS |
| CATCAAGGAACATATCTAGT+TGG | 0.526932 | 1.4:+19709966 | MS.gene31909:CDS |
| TTTGTTAATTTCTGGGTCTG+AGG | 0.529152 | 1.4:+19712646 | MS.gene31909:CDS |
| TATTTGATGATTTGAGAAGC+CGG | 0.531299 | 1.4:+19711692 | MS.gene31909:CDS |
| TCCTTGATGATTAGCAGCAA+GGG | 0.537506 | 1.4:-19709952 | None:intergenic |
| TTCCTTGATGATTAGCAGCA+AGG | 0.539334 | 1.4:-19709953 | None:intergenic |
| ACAATGGCATTAATTACTGA+AGG | 0.545712 | 1.4:-19712355 | None:intergenic |
| TGCTTAACATATAGCAAAGG+TGG | 0.555684 | 1.4:+19712620 | MS.gene31909:CDS |
| TGTCCGGTGATATATACTTG+TGG | 0.562629 | 1.4:+19709997 | MS.gene31909:CDS |
| CTTTAGCATGTTTAAACATG+CGG | 0.570663 | 1.4:-19712712 | None:intergenic |
| CAAGGAACATATCTAGTTGG+CGG | 0.571699 | 1.4:+19709969 | MS.gene31909:CDS |
| ATTTGATGATTTGAGAAGCC+GGG | 0.571886 | 1.4:+19711693 | MS.gene31909:CDS |
| AACTAAAGCATGAGTACCAA+AGG | 0.573317 | 1.4:+19714305 | MS.gene31909:CDS |
| GGTATAAAGGAGCTATTGGA+TGG | 0.575688 | 1.4:+19714382 | MS.gene31909:CDS |
| TTAGGTATGGAGCTTATCGA+GGG | 0.578721 | 1.4:+19712306 | MS.gene31909:intron |
| CACAACATCAGTTACGCGCA+TGG | 0.580262 | 1.4:-19711755 | None:intergenic |
| CTCCCACAAGTATATATCAC+CGG | 0.584664 | 1.4:-19710000 | None:intergenic |
| TAGTTTCAGCATCAGACGAT+CGG | 0.588292 | 1.4:+19711806 | MS.gene31909:CDS |
| TTTAGGTATGGAGCTTATCG+AGG | 0.594784 | 1.4:+19712305 | MS.gene31909:intron |
| CCTTGATGATTAGCAGCAAG+GGG | 0.595743 | 1.4:-19709951 | None:intergenic |
| CAATGGAGATGGCTAACCAA+TGG | 0.599592 | 1.4:+19714329 | MS.gene31909:CDS |
| AGTCATCATCAGAAAATACC+AGG | 0.602655 | 1.4:-19711277 | None:intergenic |
| TCATCTATTTCTCAGCAACA+AGG | 0.603240 | 1.4:+19714250 | MS.gene31909:intron |
| TTAAAGACTGCTATCAACCT+AGG | 0.603770 | 1.4:+19713884 | MS.gene31909:CDS |
| TGCATCCCCTGCTACCACCT+AGG | 0.606116 | 1.4:-19713901 | None:intergenic |
| TCACTACTACTGATAATCAT+GGG | 0.610605 | 1.4:+19712458 | MS.gene31909:CDS |
| CATCTCGATTTCAGAAGCGG+TGG | 0.617173 | 1.4:-19714278 | None:intergenic |
| GCTTAACATATAGCAAAGGT+GGG | 0.618928 | 1.4:+19712621 | MS.gene31909:CDS |
| GCATGAGTACCAAAGGACAA+TGG | 0.620981 | 1.4:+19714312 | MS.gene31909:CDS |
| AAGCTCTTAACTTCAACTTG+AGG | 0.621420 | 1.4:-19709909 | None:intergenic |
| GTACCAAAGGACAATGGAGA+TGG | 0.622650 | 1.4:+19714318 | MS.gene31909:CDS |
| CAATGGCATTAATTACTGAA+GGG | 0.628545 | 1.4:-19712354 | None:intergenic |
| CACCGCTTCTGAAATCGAGA+TGG | 0.629286 | 1.4:+19714279 | MS.gene31909:CDS |
| TATCAACCTAGGTGGTAGCA+GGG | 0.641512 | 1.4:+19713895 | MS.gene31909:CDS |
| ACTTGCTTAACATATAGCAA+AGG | 0.649980 | 1.4:+19712617 | MS.gene31909:CDS |
| GATGTTGTGATTGGTAATGG+AGG | 0.655310 | 1.4:+19711769 | MS.gene31909:CDS |
| CGGTGATATATACTTGTGGG+AGG | 0.658844 | 1.4:+19710001 | MS.gene31909:CDS |
| TTCAGCTGGATCCAATACAA+TGG | 0.665502 | 1.4:-19712371 | None:intergenic |
| AAGCATCCACAAAGAAACAT+GGG | 0.667252 | 1.4:+19713810 | MS.gene31909:CDS |
| ATCAACCTAGGTGGTAGCAG+GGG | 0.667538 | 1.4:+19713896 | MS.gene31909:CDS |
| ATAAAGGAGCTATTGGATGG+TGG | 0.682514 | 1.4:+19714385 | MS.gene31909:CDS |
| ATGTTGTGATTGGTAATGGA+GGG | 0.698348 | 1.4:+19711770 | MS.gene31909:CDS |
| TAGGTATGGAGCTTATCGAG+GGG | 0.703679 | 1.4:+19712307 | MS.gene31909:intron |
| AAGACTGCTATCAACCTAGG+TGG | 0.740261 | 1.4:+19713887 | MS.gene31909:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTGATTATAAGTTA+GGG | - | chr1.4:19713140-19713159 | None:intergenic | 10.0% |
| !!! | TTTTCTTTTTTTAATTATTC+AGG | - | chr1.4:19710794-19710813 | None:intergenic | 10.0% |
| !! | ACAACAATAATATTAGTTAT+AGG | - | chr1.4:19713746-19713765 | None:intergenic | 15.0% |
| !! | ACATAACAATTGTAAAAAAA+TGG | - | chr1.4:19714145-19714164 | None:intergenic | 15.0% |
| !! | ATCACAATTAAATTAGTTAA+TGG | - | chr1.4:19714217-19714236 | None:intergenic | 15.0% |
| !! | ATTCTAATTTATTCTTAAGA+TGG | + | chr1.4:19713648-19713667 | MS.gene31909:intron | 15.0% |
| !! | ATTTCCAGATTTAAATTAAT+TGG | + | chr1.4:19710696-19710715 | MS.gene31909:intron | 15.0% |
| !! | TTAGAAAAAAAGATAATCAA+TGG | + | chr1.4:19711870-19711889 | MS.gene31909:intron | 15.0% |
| !!! | AAATTTTATGAACAACTTTT+TGG | - | chr1.4:19711080-19711099 | None:intergenic | 15.0% |
| !!! | ATTATAATTTGTTAGGTAAA+AGG | - | chr1.4:19713321-19713340 | None:intergenic | 15.0% |
| !!! | ATTGTCTATTATAATTTGTT+AGG | - | chr1.4:19713328-19713347 | None:intergenic | 15.0% |
| !!! | CAAATTATTGATTATAAGTT+AGG | - | chr1.4:19713141-19713160 | None:intergenic | 15.0% |
| !!! | GATCAATAATTACAATTTTA+GGG | + | chr1.4:19713527-19713546 | MS.gene31909:intron | 15.0% |
| !!! | TGATCAATAATTACAATTTT+AGG | + | chr1.4:19713526-19713545 | MS.gene31909:intron | 15.0% |
| !! | AGTGTTAACTAACAATTAAT+GGG | + | chr1.4:19712935-19712954 | MS.gene31909:intron | 20.0% |
| !! | ATTAAGTAGTTTATCTAAAC+AGG | - | chr1.4:19710161-19710180 | None:intergenic | 20.0% |
| !! | GTATATTATCCCAAAATAAA+AGG | - | chr1.4:19711609-19711628 | None:intergenic | 20.0% |
| !! | TAAAAAAGACTGATAACTAT+AGG | - | chr1.4:19714001-19714020 | None:intergenic | 20.0% |
| !! | TACAAAATGTTGTCAAATAA+TGG | - | chr1.4:19712125-19712144 | None:intergenic | 20.0% |
| !! | TAGGTTCATTATAATAGAAT+AGG | + | chr1.4:19710846-19710865 | MS.gene31909:intron | 20.0% |
| !! | TCTTCCAATTAATTTAAATC+TGG | - | chr1.4:19710703-19710722 | None:intergenic | 20.0% |
| !! | TTAACTACTATGCTTATATA+TGG | + | chr1.4:19713621-19713640 | MS.gene31909:intron | 20.0% |
| !! | TTAAGTAGTTTATCTAAACA+GGG | - | chr1.4:19710160-19710179 | None:intergenic | 20.0% |
| !! | TTTGATATCTAATCACATTA+AGG | + | chr1.4:19713949-19713968 | MS.gene31909:CDS | 20.0% |
| !!! | AATAATTACAATTTTAGGGA+CGG | + | chr1.4:19713531-19713550 | MS.gene31909:intron | 20.0% |
| !!! | GAATTTGCATATTTTTCTAA+TGG | - | chr1.4:19713851-19713870 | None:intergenic | 20.0% |
| !!! | TGATTGATTTTCTGTTTTTT+AGG | + | chr1.4:19712288-19712307 | MS.gene31909:intron | 20.0% |
| !!! | TTTTTACAATTGTTATGTGT+TGG | + | chr1.4:19714147-19714166 | MS.gene31909:intron | 20.0% |
| ! | AAAAACTATGTCTTGAAAGT+GGG | + | chr1.4:19711143-19711162 | MS.gene31909:intron | 25.0% |
| ! | AAAAGAAAAGTTCATGACAT+AGG | - | chr1.4:19712866-19712885 | None:intergenic | 25.0% |
| ! | ACAGTAAAGAAGATAGTTTA+GGG | - | chr1.4:19710449-19710468 | None:intergenic | 25.0% |
| ! | ACCTATCTTAATTCATTAGT+AGG | - | chr1.4:19710831-19710850 | None:intergenic | 25.0% |
| ! | ACTCATCATCTAATTTAACT+TGG | - | chr1.4:19710873-19710892 | None:intergenic | 25.0% |
| ! | AGTAATTAATGCCATTGTAT+TGG | + | chr1.4:19712360-19712379 | MS.gene31909:CDS | 25.0% |
| ! | ATATAGACTTATGTCATGTT+TGG | - | chr1.4:19710660-19710679 | None:intergenic | 25.0% |
| ! | ATCTTAATTCATTAGTAGGA+GGG | - | chr1.4:19710827-19710846 | None:intergenic | 25.0% |
| ! | CTAATAACGCCAAAAATTTA+GGG | - | chr1.4:19711117-19711136 | None:intergenic | 25.0% |
| ! | GAAAACTTTAGTTGTAACTT+TGG | + | chr1.4:19711936-19711955 | MS.gene31909:intron | 25.0% |
| ! | GAGTGTTAACTAACAATTAA+TGG | + | chr1.4:19712934-19712953 | MS.gene31909:intron | 25.0% |
| ! | GGAATGTTTATTCAACTTAA+TGG | + | chr1.4:19710063-19710082 | MS.gene31909:intron | 25.0% |
| ! | TAAAAAATGCATGCTTAAGA+AGG | - | chr1.4:19713695-19713714 | None:intergenic | 25.0% |
| ! | TAACAACTGAACTTAACAAT+GGG | - | chr1.4:19713197-19713216 | None:intergenic | 25.0% |
| ! | TAATGACTGTACTTAACAAA+GGG | + | chr1.4:19713435-19713454 | MS.gene31909:intron | 25.0% |
| ! | TACAATCATTCAGAGTATAA+TGG | - | chr1.4:19713583-19713602 | None:intergenic | 25.0% |
| ! | TATCTTAATTCATTAGTAGG+AGG | - | chr1.4:19710828-19710847 | None:intergenic | 25.0% |
| ! | TCCTACTAATGAATTAAGAT+AGG | + | chr1.4:19710827-19710846 | MS.gene31909:intron | 25.0% |
| ! | TGAAGCTATAAATAAGTGAT+AGG | + | chr1.4:19710945-19710964 | MS.gene31909:intron | 25.0% |
| ! | TTTCGATGAAGAGATTTAAA+GGG | + | chr1.4:19710113-19710132 | MS.gene31909:intron | 25.0% |
| !! | CATGACATAAGTCTATATTT+TGG | + | chr1.4:19710662-19710681 | MS.gene31909:intron | 25.0% |
| !! | TCTTTACGAGTATAGTTTTT+CGG | + | chr1.4:19711726-19711745 | MS.gene31909:CDS | 25.0% |
| !! | TTGCATATTTTTCTAATGGA+GGG | - | chr1.4:19713847-19713866 | None:intergenic | 25.0% |
| !! | TTTGCATATTTTTCTAATGG+AGG | - | chr1.4:19713848-19713867 | None:intergenic | 25.0% |
| !! | TTTTACATGTTAATCTCTCT+GGG | + | chr1.4:19713710-19713729 | MS.gene31909:intron | 25.0% |
| !! | TTTTTACATGTTAATCTCTC+TGG | + | chr1.4:19713709-19713728 | MS.gene31909:intron | 25.0% |
| !!! | AACTTCTTTGCCTTTTATTT+TGG | + | chr1.4:19711596-19711615 | MS.gene31909:intron | 25.0% |
| !!! | ACTTCTTTGCCTTTTATTTT+GGG | + | chr1.4:19711597-19711616 | MS.gene31909:intron | 25.0% |
| !!! | GATTTTCTGTTTTTTAGGTA+TGG | + | chr1.4:19712293-19712312 | MS.gene31909:intron | 25.0% |
| AAAAACCCTATTCCTTCATT+TGG | + | chr1.4:19710507-19710526 | MS.gene31909:intron | 30.0% | |
| AAATAATGGCACTATAACAC+TGG | - | chr1.4:19712111-19712130 | None:intergenic | 30.0% | |
| ACAATGGCATTAATTACTGA+AGG | - | chr1.4:19712358-19712377 | None:intergenic | 30.0% | |
| ACTTGCTTAACATATAGCAA+AGG | + | chr1.4:19712617-19712636 | MS.gene31909:CDS | 30.0% | |
| AGATTTAAAGGGGGAAATTT+CGG | + | chr1.4:19710124-19710143 | MS.gene31909:intron | 30.0% | |
| AGTAGTTAACATTGAAGAAG+AGG | + | chr1.4:19710530-19710549 | MS.gene31909:intron | 30.0% | |
| ATATACTGCTCAAGTATTAC+CGG | + | chr1.4:19711623-19711642 | MS.gene31909:intron | 30.0% | |
| ATCACTACTACTGATAATCA+TGG | + | chr1.4:19712457-19712476 | MS.gene31909:CDS | 30.0% | |
| ATGTTAACTACTCCAAATGA+AGG | - | chr1.4:19710522-19710541 | None:intergenic | 30.0% | |
| ATTTGCATGCGTTATTTGTA+AGG | + | chr1.4:19711199-19711218 | MS.gene31909:intron | 30.0% | |
| ATTTGGTATAAAGGAGCTAT+TGG | + | chr1.4:19714378-19714397 | MS.gene31909:CDS | 30.0% | |
| CAATGGCATTAATTACTGAA+GGG | - | chr1.4:19712357-19712376 | None:intergenic | 30.0% | |
| CACAGTAAAGAAGATAGTTT+AGG | - | chr1.4:19710450-19710469 | None:intergenic | 30.0% | |
| CCTAATAACGCCAAAAATTT+AGG | - | chr1.4:19711118-19711137 | None:intergenic | 30.0% | |
| CTAACAACTGAACTTAACAA+TGG | - | chr1.4:19713198-19713217 | None:intergenic | 30.0% | |
| CTAATGACTGTACTTAACAA+AGG | + | chr1.4:19713434-19713453 | MS.gene31909:intron | 30.0% | |
| CTTTAGCATGTTTAAACATG+CGG | - | chr1.4:19712715-19712734 | None:intergenic | 30.0% | |
| GAAAAACTATGTCTTGAAAG+TGG | + | chr1.4:19711142-19711161 | MS.gene31909:intron | 30.0% | |
| GGAATAAACTTTGCGAAATA+TGG | + | chr1.4:19712739-19712758 | MS.gene31909:intron | 30.0% | |
| GTAGTTAACATTGAAGAAGA+GGG | + | chr1.4:19710531-19710550 | MS.gene31909:intron | 30.0% | |
| GTTAACTAACAATTAATGGG+TGG | + | chr1.4:19712938-19712957 | MS.gene31909:intron | 30.0% | |
| GTTATTTGTAAGGTTGAAAC+TGG | + | chr1.4:19711209-19711228 | MS.gene31909:intron | 30.0% | |
| GTTTCGATGAAGAGATTTAA+AGG | + | chr1.4:19710112-19710131 | MS.gene31909:intron | 30.0% | |
| TAGAAGATGTATGATTGCTT+GGG | - | chr1.4:19713784-19713803 | None:intergenic | 30.0% | |
| TCACTACTACTGATAATCAT+GGG | + | chr1.4:19712458-19712477 | MS.gene31909:CDS | 30.0% | |
| TCATAGATCGCGAAAAATAT+TGG | - | chr1.4:19711541-19711560 | None:intergenic | 30.0% | |
| TCGAAACAAACTTACACTTA+AGG | - | chr1.4:19710099-19710118 | None:intergenic | 30.0% | |
| TCTTAATTCATTAGTAGGAG+GGG | - | chr1.4:19710826-19710845 | None:intergenic | 30.0% | |
| TGAGAAAATGTCTATTCACA+CGG | - | chr1.4:19713087-19713106 | None:intergenic | 30.0% | |
| TTAGAAGATGTATGATTGCT+TGG | - | chr1.4:19713785-19713804 | None:intergenic | 30.0% | |
| TTATTTGTCATCTTCATCGA+AGG | - | chr1.4:19714422-19714441 | None:intergenic | 30.0% | |
| TTCGATGAAGAGATTTAAAG+GGG | + | chr1.4:19710114-19710133 | MS.gene31909:intron | 30.0% | |
| TTGTAACACGCCATTTAAAA+AGG | - | chr1.4:19713462-19713481 | None:intergenic | 30.0% | |
| ! | AACAAAGGGACCTTTTTAAA+TGG | + | chr1.4:19713449-19713468 | MS.gene31909:intron | 30.0% |
| ! | AAGCATTTGTAAGACTGTTT+TGG | - | chr1.4:19710606-19710625 | None:intergenic | 30.0% |
| ! | AAGTTTTCAAATAGTCGAGA+TGG | - | chr1.4:19711924-19711943 | None:intergenic | 30.0% |
| ! | AGTTTTCCAGATCTTAAACA+TGG | + | chr1.4:19712529-19712548 | MS.gene31909:intron | 30.0% |
| ! | ATTGCTATTGTTCTGCAATA+TGG | + | chr1.4:19711441-19711460 | MS.gene31909:intron | 30.0% |
| ! | ATTTGTTAGGTAAAAGGTGA+TGG | - | chr1.4:19713315-19713334 | None:intergenic | 30.0% |
| ! | CCAAAAATTTAGGGTATGAT+TGG | - | chr1.4:19711108-19711127 | None:intergenic | 30.0% |
| ! | CCAATCATACCCTAAATTTT+TGG | + | chr1.4:19711105-19711124 | MS.gene31909:intron | 30.0% |
| ! | TATTTGATGATTTGAGAAGC+CGG | + | chr1.4:19711692-19711711 | MS.gene31909:CDS | 30.0% |
| ! | TCTCATACATTTTCTTCCAT+TGG | - | chr1.4:19714348-19714367 | None:intergenic | 30.0% |
| ! | TGTTTAAGATCTGGAAAACT+AGG | - | chr1.4:19712529-19712548 | None:intergenic | 30.0% |
| ! | TTGGTTCATTTTCTAATCAC+AGG | + | chr1.4:19712491-19712510 | MS.gene31909:CDS | 30.0% |
| ! | TTTCCATTGAATTTTGAGCA+GGG | + | chr1.4:19713265-19713284 | MS.gene31909:intron | 30.0% |
| ! | TTTTCCATTGAATTTTGAGC+AGG | + | chr1.4:19713264-19713283 | MS.gene31909:intron | 30.0% |
| !! | CTTGATGCTTGGATTTTAAT+GGG | + | chr1.4:19710042-19710061 | MS.gene31909:intron | 30.0% |
| !! | GTGGGAATTTGTTAATTTCT+GGG | + | chr1.4:19712639-19712658 | MS.gene31909:CDS | 30.0% |
| !!! | CCTAAATTTTTGGCGTTATT+AGG | + | chr1.4:19711115-19711134 | MS.gene31909:intron | 30.0% |
| AAAATCTTGCACACAGACAA+AGG | - | chr1.4:19713008-19713027 | None:intergenic | 35.0% | |
| AAAATGCATGCTTAAGAAGG+TGG | - | chr1.4:19713692-19713711 | None:intergenic | 35.0% | |
| AAATCAAGAATCCTAGCCAT+AGG | - | chr1.4:19713062-19713081 | None:intergenic | 35.0% | |
| AACTAAAGCATGAGTACCAA+AGG | + | chr1.4:19714305-19714324 | MS.gene31909:CDS | 35.0% | |
| AAGATGGATATGTACGAGTT+TGG | + | chr1.4:19711321-19711340 | MS.gene31909:CDS | 35.0% | |
| AAGCATCCACAAAGAAACAT+GGG | + | chr1.4:19713810-19713829 | MS.gene31909:CDS | 35.0% | |
| AAGCGTAGTATATCCCAAAA+TGG | - | chr1.4:19711655-19711674 | None:intergenic | 35.0% | |
| AAGCTCTTAACTTCAACTTG+AGG | - | chr1.4:19709912-19709931 | None:intergenic | 35.0% | |
| AATCAAGAATCCTAGCCATA+GGG | - | chr1.4:19713061-19713080 | None:intergenic | 35.0% | |
| AATCATGGGATGCATATCAT+TGG | + | chr1.4:19712472-19712491 | MS.gene31909:CDS | 35.0% | |
| AATGGCGTGTTACAATTTCA+TGG | + | chr1.4:19713467-19713486 | MS.gene31909:intron | 35.0% | |
| ACCGACATAGATATGAATAC+CGG | - | chr1.4:19714181-19714200 | None:intergenic | 35.0% | |
| ACTACTCCAAATGAAGGAAT+AGG | - | chr1.4:19710516-19710535 | None:intergenic | 35.0% | |
| ACTGATGTTGTGATTGGTAA+TGG | + | chr1.4:19711766-19711785 | MS.gene31909:CDS | 35.0% | |
| AGAAATGGCATGCTCATTTA+AGG | + | chr1.4:19711243-19711262 | MS.gene31909:CDS | 35.0% | |
| AGTCATCATCAGAAAATACC+AGG | - | chr1.4:19711280-19711299 | None:intergenic | 35.0% | |
| AGTTTATCTAAACAGGGTCT+TGG | - | chr1.4:19710154-19710173 | None:intergenic | 35.0% | |
| ATAAGACCCATGTTTCTTTG+TGG | - | chr1.4:19713819-19713838 | None:intergenic | 35.0% | |
| ATATACTACGCTTCATGTCA+TGG | + | chr1.4:19711662-19711681 | MS.gene31909:intron | 35.0% | |
| CATCAAGGAACATATCTAGT+TGG | + | chr1.4:19709966-19709985 | MS.gene31909:CDS | 35.0% | |
| CGCATGTTTAAACATGCTAA+AGG | + | chr1.4:19712713-19712732 | MS.gene31909:CDS | 35.0% | |
| CTACTCCAAATGAAGGAATA+GGG | - | chr1.4:19710515-19710534 | None:intergenic | 35.0% | |
| CTCACAGATTCTAATTGACA+CGG | - | chr1.4:19712911-19712930 | None:intergenic | 35.0% | |
| CTTGCACGAATTTGGTATAA+AGG | + | chr1.4:19714369-19714388 | MS.gene31909:CDS | 35.0% | |
| GAAATGGCATGCTCATTTAA+GGG | + | chr1.4:19711244-19711263 | MS.gene31909:CDS | 35.0% | |
| GACTTATGTCATGTTTGGAT+TGG | - | chr1.4:19710655-19710674 | None:intergenic | 35.0% | |
| GAGAAAATGTCTATTCACAC+GGG | - | chr1.4:19713086-19713105 | None:intergenic | 35.0% | |
| GCTTAACATATAGCAAAGGT+GGG | + | chr1.4:19712621-19712640 | MS.gene31909:CDS | 35.0% | |
| GGAAAAACAACTTGAGCATT+AGG | - | chr1.4:19712890-19712909 | None:intergenic | 35.0% | |
| GGACGAAAATAAGAGTGAAT+AGG | - | chr1.4:19713562-19713581 | None:intergenic | 35.0% | |
| GTGAACCTATTATGTGAATG+TGG | - | chr1.4:19710367-19710386 | None:intergenic | 35.0% | |
| GTGTCTGACATTGATACATA+TGG | + | chr1.4:19714101-19714120 | MS.gene31909:intron | 35.0% | |
| GTTAGCAACGAAAAAAAGTG+TGG | + | chr1.4:19710311-19710330 | MS.gene31909:intron | 35.0% | |
| GTTTAAACATGCTAAAGGTG+TGG | + | chr1.4:19712718-19712737 | MS.gene31909:intron | 35.0% | |
| TAATCACATTAAGGAGCTTC+AGG | + | chr1.4:19713958-19713977 | MS.gene31909:CDS | 35.0% | |
| TACATTACGTCATTTCCCTA+TGG | + | chr1.4:19713043-19713062 | MS.gene31909:intron | 35.0% | |
| TATGAGAACTTGCACGAATT+TGG | + | chr1.4:19714361-19714380 | MS.gene31909:CDS | 35.0% | |
| TCCGGTATTCATATCTATGT+CGG | + | chr1.4:19714177-19714196 | MS.gene31909:intron | 35.0% | |
| TCGATGAAGAGATTTAAAGG+GGG | + | chr1.4:19710115-19710134 | MS.gene31909:intron | 35.0% | |
| TCGCAGATCATGTAAAATAG+TGG | + | chr1.4:19712061-19712080 | MS.gene31909:intron | 35.0% | |
| TGCTTAACATATAGCAAAGG+TGG | + | chr1.4:19712620-19712639 | MS.gene31909:CDS | 35.0% | |
| TGTATGAAATTGCGTATTGC+TGG | + | chr1.4:19712141-19712160 | MS.gene31909:intron | 35.0% | |
| TGTCACCACATTCACATAAT+AGG | + | chr1.4:19710359-19710378 | MS.gene31909:intron | 35.0% | |
| TTAAAGACTGCTATCAACCT+AGG | + | chr1.4:19713884-19713903 | MS.gene31909:CDS | 35.0% | |
| TTACCCTGCTCAAAATTCAA+TGG | - | chr1.4:19713271-19713290 | None:intergenic | 35.0% | |
| TTACTGTGTAGTCATTACAG+AGG | + | chr1.4:19710462-19710481 | MS.gene31909:intron | 35.0% | |
| TTAGATAGCATGACATGACA+CGG | - | chr1.4:19713418-19713437 | None:intergenic | 35.0% | |
| TTCCATCTGAATCTGAATGT+TGG | - | chr1.4:19714058-19714077 | None:intergenic | 35.0% | |
| TTTGAGCAGGGTAAAACAAA+GGG | + | chr1.4:19713277-19713296 | MS.gene31909:intron | 35.0% | |
| ! | ACTGCTTTGCTGTAAAAATG+AGG | - | chr1.4:19712596-19712615 | None:intergenic | 35.0% |
| ! | ATTTGATGATTTGAGAAGCC+GGG | + | chr1.4:19711693-19711712 | MS.gene31909:CDS | 35.0% |
| ! | CGTAAAGATTCTTTTCTTCC+CGG | - | chr1.4:19711714-19711733 | None:intergenic | 35.0% |
| ! | CTGAACATGTGTTTTATGCT+GGG | + | chr1.4:19712389-19712408 | MS.gene31909:CDS | 35.0% |
| ! | GAGTCATTGGTTAAGTTGTT+AGG | + | chr1.4:19710919-19710938 | MS.gene31909:intron | 35.0% |
| ! | GCTTGATGCTTGGATTTTAA+TGG | + | chr1.4:19710041-19710060 | MS.gene31909:intron | 35.0% |
| ! | TACGAAGTGTTTCCAAATAG+CGG | + | chr1.4:19711471-19711490 | MS.gene31909:intron | 35.0% |
| ! | TCATCTATTTCTCAGCAACA+AGG | + | chr1.4:19714250-19714269 | MS.gene31909:intron | 35.0% |
| ! | TTTGTTAATTTCTGGGTCTG+AGG | + | chr1.4:19712646-19712665 | MS.gene31909:CDS | 35.0% |
| ! | TTTTGAGCAGGGTAAAACAA+AGG | + | chr1.4:19713276-19713295 | MS.gene31909:intron | 35.0% |
| !! | ATGTTGTGATTGGTAATGGA+GGG | + | chr1.4:19711770-19711789 | MS.gene31909:CDS | 35.0% |
| !! | GGTGGGAATTTGTTAATTTC+TGG | + | chr1.4:19712638-19712657 | MS.gene31909:CDS | 35.0% |
| !! | TAGTATTGCTTTTGCATGAC+AGG | + | chr1.4:19712775-19712794 | MS.gene31909:intron | 35.0% |
| AGGATGGAATAGTTCGTGTT+TGG | + | chr1.4:19712666-19712685 | MS.gene31909:CDS | 40.0% | |
| ATAAAGGAGCTATTGGATGG+TGG | + | chr1.4:19714385-19714404 | MS.gene31909:CDS | 40.0% | |
| ATTCATATCTATGTCGGTGC+AGG | + | chr1.4:19714183-19714202 | MS.gene31909:intron | 40.0% | |
| CAAGCATCCACAAAGAAACA+TGG | + | chr1.4:19713809-19713828 | MS.gene31909:CDS | 40.0% | |
| CAAGGAACATATCTAGTTGG+CGG | + | chr1.4:19709969-19709988 | MS.gene31909:CDS | 40.0% | |
| CACCAACATTCAGATTCAGA+TGG | + | chr1.4:19714053-19714072 | MS.gene31909:intron | 40.0% | |
| CTCCCACAAGTATATATCAC+CGG | - | chr1.4:19710003-19710022 | None:intergenic | 40.0% | |
| CTGAAGACATGACAATGATG+TGG | + | chr1.4:19713355-19713374 | MS.gene31909:intron | 40.0% | |
| CTGGCAGATTGCTTAAGAAA+TGG | + | chr1.4:19711228-19711247 | MS.gene31909:CDS | 40.0% | |
| GAAATGACGTAATGTAGCAC+AGG | - | chr1.4:19713039-19713058 | None:intergenic | 40.0% | |
| GACCATATGATGTCTTCTCT+TGG | + | chr1.4:19712553-19712572 | MS.gene31909:intron | 40.0% | |
| GCATAAAACACATGTTCAGC+TGG | - | chr1.4:19712388-19712407 | None:intergenic | 40.0% | |
| GGACACGTTAAATGAACATG+TGG | - | chr1.4:19713396-19713415 | None:intergenic | 40.0% | |
| GGTATAAAGGAGCTATTGGA+TGG | + | chr1.4:19714382-19714401 | MS.gene31909:CDS | 40.0% | |
| GTCCGGTGATATATACTTGT+GGG | + | chr1.4:19709998-19710017 | MS.gene31909:CDS | 40.0% | |
| TAGATAGCATGACATGACAC+GGG | - | chr1.4:19713417-19713436 | None:intergenic | 40.0% | |
| TAGTTTCAGCATCAGACGAT+CGG | + | chr1.4:19711806-19711825 | MS.gene31909:CDS | 40.0% | |
| TATCCCAAAATGGTTAGCAC+CGG | - | chr1.4:19711645-19711664 | None:intergenic | 40.0% | |
| TGCCAAGAGAAGACATCATA+TGG | - | chr1.4:19712558-19712577 | None:intergenic | 40.0% | |
| TGCGAAATATGGCATACTCT+TGG | + | chr1.4:19712750-19712769 | MS.gene31909:intron | 40.0% | |
| TGGACTTGCCCAACAAAATT+GGG | - | chr1.4:19712031-19712050 | None:intergenic | 40.0% | |
| TGTCCGGTGATATATACTTG+TGG | + | chr1.4:19709997-19710016 | MS.gene31909:CDS | 40.0% | |
| TTAGGTATGGAGCTTATCGA+GGG | + | chr1.4:19712306-19712325 | MS.gene31909:intron | 40.0% | |
| TTCAGCTGGATCCAATACAA+TGG | - | chr1.4:19712374-19712393 | None:intergenic | 40.0% | |
| TTTAAAGGGGGAAATTTCGG+AGG | + | chr1.4:19710127-19710146 | MS.gene31909:intron | 40.0% | |
| TTTAGGTATGGAGCTTATCG+AGG | + | chr1.4:19712305-19712324 | MS.gene31909:intron | 40.0% | |
| TTTCCAAATAGCGGCTATAG+TGG | + | chr1.4:19711480-19711499 | MS.gene31909:intron | 40.0% | |
| ! | AGTCATTACAGAGGCTTGTT+TGG | + | chr1.4:19710471-19710490 | MS.gene31909:intron | 40.0% |
| ! | GATCTAGAGTGATGAGTCAT+TGG | + | chr1.4:19710906-19710925 | MS.gene31909:intron | 40.0% |
| ! | GCTGAACATGTGTTTTATGC+TGG | + | chr1.4:19712388-19712407 | MS.gene31909:CDS | 40.0% |
| ! | GTAGCTGACCCAATTTTGTT+GGG | + | chr1.4:19712020-19712039 | MS.gene31909:intron | 40.0% |
| ! | TAATTCACACAGCTTGCTTC+TGG | + | chr1.4:19712261-19712280 | MS.gene31909:intron | 40.0% |
| ! | TATAACACTGGTTGCATAGC+TGG | - | chr1.4:19712099-19712118 | None:intergenic | 40.0% |
| ! | TCCTTGATGATTAGCAGCAA+GGG | - | chr1.4:19709955-19709974 | None:intergenic | 40.0% |
| ! | TGGTCACCATGTTTAAGATC+TGG | - | chr1.4:19712538-19712557 | None:intergenic | 40.0% |
| ! | TGTAGCTGACCCAATTTTGT+TGG | + | chr1.4:19712019-19712038 | MS.gene31909:intron | 40.0% |
| ! | TTAATTTCTGGGTCTGAGGA+TGG | + | chr1.4:19712650-19712669 | MS.gene31909:CDS | 40.0% |
| ! | TTCCTTGATGATTAGCAGCA+AGG | - | chr1.4:19709956-19709975 | None:intergenic | 40.0% |
| ! | TTTTATGCTGGGAGTAGTGA+TGG | + | chr1.4:19712400-19712419 | MS.gene31909:CDS | 40.0% |
| !! | ATTACCGGTGCTAACCATTT+TGG | + | chr1.4:19711638-19711657 | MS.gene31909:intron | 40.0% |
| !! | CTGATATCTGGTTCTGAAGA+TGG | + | chr1.4:19711305-19711324 | MS.gene31909:CDS | 40.0% |
| !! | GAATGTTGGTGCTACATAGA+TGG | - | chr1.4:19714044-19714063 | None:intergenic | 40.0% |
| !! | GATGTTGTGATTGGTAATGG+AGG | + | chr1.4:19711769-19711788 | MS.gene31909:CDS | 40.0% |
| !! | TTACCGGTGCTAACCATTTT+GGG | + | chr1.4:19711639-19711658 | MS.gene31909:intron | 40.0% |
| !! | TTATGTGTTGGTGTCGTATC+CGG | + | chr1.4:19714159-19714178 | MS.gene31909:intron | 40.0% |
| ACAATGATGTGGAGTCCATG+TGG | + | chr1.4:19713366-19713385 | MS.gene31909:intron | 45.0% | |
| CAAATAGTCGAGATGGAAGC+AGG | - | chr1.4:19711917-19711936 | None:intergenic | 45.0% | |
| CAATGGAGATGGCTAACCAA+TGG | + | chr1.4:19714329-19714348 | MS.gene31909:CDS | 45.0% | |
| CATTTAACGACACTACCGCA+GGG | + | chr1.4:19712214-19712233 | MS.gene31909:intron | 45.0% | |
| CGCGTAACTGATGTTGTGAT+TGG | + | chr1.4:19711760-19711779 | MS.gene31909:CDS | 45.0% | |
| CGGTGATATATACTTGTGGG+AGG | + | chr1.4:19710001-19710020 | MS.gene31909:CDS | 45.0% | |
| CTCCATCTCGATTTCAGAAG+CGG | - | chr1.4:19714284-19714303 | None:intergenic | 45.0% | |
| CTGGACTTGCCCAACAAAAT+TGG | - | chr1.4:19712032-19712051 | None:intergenic | 45.0% | |
| GATGACTCACTGCTGATATC+TGG | + | chr1.4:19711293-19711312 | MS.gene31909:CDS | 45.0% | |
| GCATGAGTACCAAAGGACAA+TGG | + | chr1.4:19714312-19714331 | MS.gene31909:CDS | 45.0% | |
| GTACCAAAGGACAATGGAGA+TGG | + | chr1.4:19714318-19714337 | MS.gene31909:CDS | 45.0% | |
| GTAGTGATGTTGTAGCGTAG+AGG | - | chr1.4:19712189-19712208 | None:intergenic | 45.0% | |
| TACGTCATTTCCCTATGGCT+AGG | + | chr1.4:19713048-19713067 | MS.gene31909:intron | 45.0% | |
| TAGCCATCTCCATTGTCCTT+TGG | - | chr1.4:19714324-19714343 | None:intergenic | 45.0% | |
| TAGGTATGGAGCTTATCGAG+GGG | + | chr1.4:19712307-19712326 | MS.gene31909:intron | 45.0% | |
| TCACATTCACGCTTGATGCT+TGG | + | chr1.4:19710031-19710050 | MS.gene31909:intron | 45.0% | |
| TCTTGCACACAGACAAAGGA+TGG | - | chr1.4:19713004-19713023 | None:intergenic | 45.0% | |
| TGACCAGTGTTGTCAACTAG+TGG | + | chr1.4:19711380-19711399 | MS.gene31909:intron | 45.0% | |
| TGATCTGCGATTGACAACAC+TGG | - | chr1.4:19712051-19712070 | None:intergenic | 45.0% | |
| ! | CCTTGATGATTAGCAGCAAG+GGG | - | chr1.4:19709954-19709973 | None:intergenic | 45.0% |
| ! | TGCGGTAGTGTCGTTAAATG+CGG | - | chr1.4:19712214-19712233 | None:intergenic | 45.0% |
| !!! | TACGAGTTTGGTCGCTTTTC+AGG | + | chr1.4:19711333-19711352 | MS.gene31909:CDS | 45.0% |
| !!! | CTTTTTTATTTTTAATTTAA+AGG | + | chr1.4:19714013-19714032 | MS.gene31909:intron | 5.0% |
| ATCAGACGATCGGACGTGTA+AGG | + | chr1.4:19711816-19711835 | MS.gene31909:CDS | 50.0% | |
| CACAACATCAGTTACGCGCA+TGG | - | chr1.4:19711758-19711777 | None:intergenic | 50.0% | |
| CATCTCGATTTCAGAAGCGG+TGG | - | chr1.4:19714281-19714300 | None:intergenic | 50.0% | |
| CCAGTGTTGTCAACTAGTGG+AGG | + | chr1.4:19711383-19711402 | MS.gene31909:intron | 50.0% | |
| CCCCTTGCTGCTAATCATCA+AGG | + | chr1.4:19709951-19709970 | MS.gene31909:CDS | 50.0% | |
| CCTCCACTAGTTGACAACAC+TGG | - | chr1.4:19711386-19711405 | None:intergenic | 50.0% | |
| GCATGCTTAAGAAGGTGGCT+CGG | - | chr1.4:19713687-19713706 | None:intergenic | 50.0% | |
| GCATTTAACGACACTACCGC+AGG | + | chr1.4:19712213-19712232 | MS.gene31909:intron | 50.0% | |
| GGGAGATGTGTTTGCAACAG+TGG | + | chr1.4:19710551-19710570 | MS.gene31909:intron | 50.0% | |
| TGAACATGTGGCAGTCCACA+TGG | - | chr1.4:19713384-19713403 | None:intergenic | 50.0% | |
| TTTAAGGGCAGTCACTTGCC+TGG | + | chr1.4:19711259-19711278 | MS.gene31909:CDS | 50.0% | |
| ! | TTAATCTCTCTGGGTGCTGC+AGG | + | chr1.4:19713719-19713738 | MS.gene31909:intron | 50.0% |
| !! | CACCGCTTCTGAAATCGAGA+TGG | + | chr1.4:19714279-19714298 | MS.gene31909:CDS | 50.0% |
| CAAACAACAGCCAAGCCCTG+CGG | - | chr1.4:19712232-19712251 | None:intergenic | 55.0% | |
| GCGCCACTATAGCCGCTATT+TGG | - | chr1.4:19711486-19711505 | None:intergenic | 55.0% | |
| GTGACAGCCGCTATCACTCA+GGG | - | chr1.4:19710345-19710364 | None:intergenic | 55.0% | |
| TGACAGCCGCTATCACTCAG+GGG | - | chr1.4:19710344-19710363 | None:intergenic | 55.0% | |
| TGTCGTCCCCTGAGTGATAG+CGG | + | chr1.4:19710335-19710354 | MS.gene31909:intron | 55.0% | |
| ! | CTAGTTGGCGGAGCTTTGTC+CGG | + | chr1.4:19709981-19710000 | MS.gene31909:CDS | 55.0% |
| AACGACACTACCGCAGGGCT+TGG | + | chr1.4:19712219-19712238 | MS.gene31909:intron | 60.0% | |
| GGTGACAGCCGCTATCACTC+AGG | - | chr1.4:19710346-19710365 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 19709909 | 19714441 | 19709909 | ID=MS.gene31909 |
| chr1.4 | mRNA | 19709909 | 19714441 | 19709909 | ID=MS.gene31909.t1;Parent=MS.gene31909 |
| chr1.4 | exon | 19709909 | 19710022 | 19709909 | ID=MS.gene31909.t1.exon1;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19709909 | 19710022 | 19709909 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19711221 | 19711354 | 19711221 | ID=MS.gene31909.t1.exon2;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19711221 | 19711354 | 19711221 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19711690 | 19711837 | 19711690 | ID=MS.gene31909.t1.exon3;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19711690 | 19711837 | 19711690 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19712310 | 19712512 | 19712310 | ID=MS.gene31909.t1.exon4;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19712310 | 19712512 | 19712310 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19712607 | 19712734 | 19712607 | ID=MS.gene31909.t1.exon5;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19712607 | 19712734 | 19712607 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19713741 | 19713979 | 19713741 | ID=MS.gene31909.t1.exon6;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19713741 | 19713979 | 19713741 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| chr1.4 | exon | 19714265 | 19714441 | 19714265 | ID=MS.gene31909.t1.exon7;Parent=MS.gene31909.t1 |
| chr1.4 | CDS | 19714265 | 19714441 | 19714265 | ID=cds.MS.gene31909.t1;Parent=MS.gene31909.t1 |
| Gene Sequence |
| Protein sequence |
