Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34711.t1 | XP_013445739.1 | 98.2 | 497 | 9 | 0 | 1 | 497 | 1 | 497 | 3.90E-267 | 930.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34711.t1 | Q8L736 | 58.0 | 507 | 163 | 8 | 1 | 497 | 1 | 467 | 1.4e-137 | 491.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34711.t1 | A0A072U1V1 | 98.2 | 497 | 9 | 0 | 1 | 497 | 1 | 497 | 2.8e-267 | 930.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055886 | MS.gene34711 | 0.889576 | 2.14E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34711 | MS.gene055886 | PPI |
| MS.gene34711 | MS.gene013419 | PPI |
| MS.gene032830 | MS.gene34711 | PPI |
| MS.gene074027 | MS.gene34711 | PPI |
| MS.gene34711 | MS.gene83931 | PPI |
| MS.gene34711 | MS.gene25443 | PPI |
| MS.gene34711 | MS.gene032830 | PPI |
| MS.gene91909 | MS.gene34711 | PPI |
| MS.gene34711 | MS.gene049391 | PPI |
| MS.gene06516 | MS.gene34711 | PPI |
| MS.gene059347 | MS.gene34711 | PPI |
| MS.gene34711 | MS.gene63251 | PPI |
| MS.gene25443 | MS.gene34711 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34711.t1 | MTR_8g468030 | 97.988 | 497 | 10 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1016 |
| MS.gene34711.t1 | MTR_5g039390 | 72.549 | 510 | 93 | 7 | 1 | 497 | 1 | 476 | 0.0 | 740 |
| MS.gene34711.t1 | MTR_4g108280 | 62.803 | 371 | 135 | 2 | 130 | 497 | 10 | 380 | 8.52e-175 | 496 |
| MS.gene34711.t1 | MTR_0345s0010 | 62.890 | 353 | 130 | 1 | 145 | 497 | 84 | 435 | 8.26e-165 | 473 |
| MS.gene34711.t1 | MTR_0105s0170 | 62.890 | 353 | 130 | 1 | 145 | 497 | 97 | 448 | 6.49e-164 | 471 |
| MS.gene34711.t1 | MTR_0105s0130 | 62.890 | 353 | 130 | 1 | 145 | 497 | 84 | 435 | 8.42e-164 | 471 |
| MS.gene34711.t1 | MTR_0105s0020 | 62.040 | 353 | 133 | 1 | 145 | 497 | 84 | 435 | 3.75e-163 | 469 |
| MS.gene34711.t1 | MTR_0105s0040 | 62.890 | 353 | 130 | 1 | 145 | 497 | 182 | 533 | 3.92e-163 | 473 |
| MS.gene34711.t1 | MTR_4g022260 | 62.500 | 360 | 134 | 1 | 138 | 497 | 59 | 417 | 7.78e-163 | 468 |
| MS.gene34711.t1 | MTR_0496s0010 | 61.389 | 360 | 132 | 2 | 138 | 497 | 59 | 411 | 2.68e-161 | 463 |
| MS.gene34711.t1 | MTR_1330s0010 | 62.536 | 347 | 129 | 1 | 145 | 491 | 97 | 442 | 1.03e-159 | 461 |
| MS.gene34711.t1 | MTR_4g022400 | 60.734 | 354 | 138 | 1 | 144 | 497 | 62 | 414 | 9.13e-155 | 447 |
| MS.gene34711.t1 | MTR_2g094093 | 51.130 | 354 | 160 | 4 | 149 | 497 | 19 | 364 | 2.49e-117 | 350 |
| MS.gene34711.t1 | MTR_7g029290 | 36.031 | 383 | 217 | 10 | 122 | 495 | 38 | 401 | 4.82e-67 | 221 |
| MS.gene34711.t1 | MTR_6g023805 | 37.190 | 363 | 194 | 8 | 151 | 495 | 57 | 403 | 2.17e-63 | 212 |
| MS.gene34711.t1 | MTR_0105s0060 | 62.637 | 91 | 34 | 0 | 407 | 497 | 15 | 105 | 2.25e-36 | 130 |
| MS.gene34711.t1 | MTR_3g085570 | 27.306 | 271 | 168 | 8 | 124 | 373 | 5 | 267 | 1.90e-21 | 96.3 |
| MS.gene34711.t1 | MTR_3g073640 | 24.928 | 349 | 186 | 12 | 150 | 429 | 43 | 384 | 1.78e-16 | 82.4 |
| MS.gene34711.t1 | MTR_8g080370 | 26.531 | 245 | 155 | 6 | 146 | 373 | 47 | 283 | 2.41e-16 | 81.3 |
| MS.gene34711.t1 | MTR_4g114110 | 25.649 | 308 | 200 | 10 | 126 | 422 | 58 | 347 | 3.56e-16 | 81.3 |
| MS.gene34711.t1 | MTR_8g085600 | 26.056 | 284 | 182 | 9 | 150 | 422 | 77 | 343 | 8.92e-16 | 79.7 |
| MS.gene34711.t1 | MTR_2g008440 | 24.438 | 356 | 190 | 11 | 146 | 429 | 39 | 387 | 6.17e-15 | 77.4 |
| MS.gene34711.t1 | MTR_4g011900 | 22.255 | 337 | 220 | 7 | 150 | 460 | 5 | 325 | 9.28e-15 | 76.3 |
| MS.gene34711.t1 | MTR_7g095220 | 21.605 | 324 | 207 | 7 | 148 | 454 | 2 | 295 | 7.69e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34711.t1 | AT2G02870 | 58.661 | 508 | 158 | 11 | 1 | 497 | 1 | 467 | 0.0 | 555 |
| MS.gene34711.t1 | AT2G02870 | 58.661 | 508 | 158 | 11 | 1 | 497 | 1 | 467 | 0.0 | 555 |
| MS.gene34711.t1 | AT2G02870 | 58.661 | 508 | 158 | 11 | 1 | 497 | 1 | 467 | 0.0 | 555 |
| MS.gene34711.t1 | AT1G14330 | 70.106 | 378 | 107 | 3 | 123 | 497 | 67 | 441 | 0.0 | 542 |
| MS.gene34711.t1 | AT1G26930 | 67.663 | 368 | 116 | 1 | 133 | 497 | 54 | 421 | 0.0 | 523 |
| MS.gene34711.t1 | AT1G74510 | 65.449 | 356 | 114 | 2 | 151 | 497 | 96 | 451 | 5.70e-169 | 484 |
| MS.gene34711.t1 | AT1G74510 | 65.449 | 356 | 114 | 2 | 151 | 497 | 96 | 451 | 5.70e-169 | 484 |
| MS.gene34711.t1 | AT1G74510 | 65.449 | 356 | 114 | 2 | 151 | 497 | 96 | 451 | 5.70e-169 | 484 |
| MS.gene34711.t1 | AT1G26930 | 57.337 | 368 | 102 | 2 | 133 | 497 | 54 | 369 | 3.27e-146 | 423 |
| MS.gene34711.t1 | AT5G60570 | 47.027 | 370 | 181 | 6 | 134 | 497 | 33 | 393 | 2.48e-109 | 330 |
| MS.gene34711.t1 | AT5G60570 | 47.027 | 370 | 181 | 6 | 134 | 497 | 33 | 393 | 2.48e-109 | 330 |
| MS.gene34711.t1 | AT5G60570 | 47.027 | 370 | 181 | 6 | 134 | 497 | 33 | 393 | 2.48e-109 | 330 |
| MS.gene34711.t1 | AT3G27150 | 34.819 | 359 | 211 | 7 | 151 | 495 | 71 | 420 | 2.12e-63 | 212 |
| MS.gene34711.t1 | AT3G27150 | 34.819 | 359 | 211 | 7 | 151 | 495 | 71 | 420 | 2.12e-63 | 212 |
| MS.gene34711.t1 | AT5G40680 | 33.245 | 379 | 234 | 7 | 127 | 495 | 44 | 413 | 1.03e-59 | 202 |
| MS.gene34711.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 8.89e-22 | 97.4 |
| MS.gene34711.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 8.89e-22 | 97.4 |
| MS.gene34711.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 9.04e-21 | 94.4 |
| MS.gene34711.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 9.04e-21 | 94.4 |
| MS.gene34711.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 9.04e-21 | 94.4 |
| MS.gene34711.t1 | AT1G15670 | 25.937 | 347 | 208 | 13 | 150 | 466 | 3 | 330 | 2.57e-17 | 84.0 |
| MS.gene34711.t1 | AT1G55270 | 25.352 | 284 | 184 | 10 | 150 | 422 | 78 | 344 | 9.81e-16 | 79.7 |
| MS.gene34711.t1 | AT1G80440 | 24.924 | 329 | 211 | 11 | 150 | 457 | 3 | 316 | 1.09e-13 | 72.8 |
| MS.gene34711.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 2 | 214 | 1.70e-13 | 72.0 |
| MS.gene34711.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 1.84e-13 | 72.0 |
| MS.gene34711.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 1.84e-13 | 72.0 |
| MS.gene34711.t1 | AT1G22040 | 23.989 | 371 | 209 | 11 | 126 | 429 | 19 | 383 | 8.40e-12 | 67.8 |
Find 146 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATTCATGCCGGATT+TGG | 0.208968 | 8.1:-45525229 | MS.gene34711:CDS |
| GGAGATAGGCTTATTGTTAT+TGG | 0.237398 | 8.1:-45523974 | MS.gene34711:CDS |
| TTCCTGGGCTTGATCATGTT+TGG | 0.245172 | 8.1:+45524343 | None:intergenic |
| ACGGTTGGGGTCTTGCATTT+AGG | 0.270827 | 8.1:-45524003 | MS.gene34711:CDS |
| TCCTGGGCTTGATCATGTTT+GGG | 0.274266 | 8.1:+45524344 | None:intergenic |
| CGGTTGGGGTCTTGCATTTA+GGG | 0.286736 | 8.1:-45524002 | MS.gene34711:CDS |
| TGCATCCACCGTTCGCGAAT+TGG | 0.289308 | 8.1:+45524658 | None:intergenic |
| TTGACAAACTCGTGGGAATC+TGG | 0.303822 | 8.1:-45524511 | MS.gene34711:CDS |
| GGTACCGAACTTCTTGTGTT+TGG | 0.310632 | 8.1:-45524574 | MS.gene34711:CDS |
| CGCTGTTCGAGGTCCGATTA+TGG | 0.311285 | 8.1:-45524817 | MS.gene34711:CDS |
| CATTCGTTAGAAGCCATTCT+AGG | 0.314758 | 8.1:+45524631 | None:intergenic |
| TACCCCAGAGCACATCTTCC+TGG | 0.332847 | 8.1:+45524327 | None:intergenic |
| CATTTAGGGCATGTGGAGAT+AGG | 0.347335 | 8.1:-45523988 | MS.gene34711:CDS |
| TGCCTCTGCGTGACAAGAAC+TGG | 0.353141 | 8.1:+45525269 | None:intergenic |
| GTACCGAACTTCTTGTGTTT+GGG | 0.354894 | 8.1:-45524573 | MS.gene34711:CDS |
| CGCAGCCGAGGAAGGTTAAC+AGG | 0.363634 | 8.1:-45525164 | MS.gene34711:CDS |
| CCGTTCGCGAATTGGATCAT+AGG | 0.379832 | 8.1:+45524666 | None:intergenic |
| TGTTTCCCATGTTTGATTCT+CGG | 0.387447 | 8.1:+45524369 | None:intergenic |
| AACTCAATTCATGGGTTCCT+AGG | 0.410839 | 8.1:-45523919 | MS.gene34711:CDS |
| CGAGGCAAGTGAACCATAAT+CGG | 0.416718 | 8.1:+45524804 | None:intergenic |
| AGAGCTTCCGCAGCATAATT+CGG | 0.419222 | 8.1:-45524774 | MS.gene34711:CDS |
| TAACGAATGCTTCATGTGTT+CGG | 0.419509 | 8.1:-45524617 | MS.gene34711:CDS |
| CAGAAGAAGCAGCTTGATGA+TGG | 0.421720 | 8.1:-45524964 | MS.gene34711:CDS |
| TGTCACCCGGGCGTAGTGCT+AGG | 0.424613 | 8.1:-45524189 | MS.gene34711:CDS |
| CTACGCCCGGGTGACATGTT+AGG | 0.424620 | 8.1:+45524196 | None:intergenic |
| GCTTACAATTGGTAGATTAC+CGG | 0.426080 | 8.1:-45524044 | MS.gene34711:CDS |
| AATCTCCTGTTAACCTTCCT+CGG | 0.429428 | 8.1:+45525159 | None:intergenic |
| TGTTGTTCCGCAAATCGATC+TGG | 0.429697 | 8.1:-45525106 | MS.gene34711:CDS |
| CCTGTCTAAGCCGCTGTTCG+AGG | 0.435548 | 8.1:-45524828 | MS.gene34711:CDS |
| GATGTGCTCTGGGGTATTCA+TGG | 0.436117 | 8.1:-45524320 | MS.gene34711:CDS |
| ATGCTTCATGTGTTCGGATA+AGG | 0.437733 | 8.1:-45524611 | MS.gene34711:CDS |
| GTGGATGCATTTACCTAGAA+TGG | 0.438443 | 8.1:-45524644 | MS.gene34711:CDS |
| TTTCGTGTGCCCTCCTCGAA+TGG | 0.440135 | 8.1:-45524693 | MS.gene34711:CDS |
| GCAATTATAAACAAAGTTAC+CGG | 0.440298 | 8.1:+45523856 | None:intergenic |
| AGCAGCTTCGATGAACGGTT+GGG | 0.443209 | 8.1:-45524017 | MS.gene34711:CDS |
| GGTGGTGCCTCGGCTGTGGC+AGG | 0.444795 | 8.1:+45524154 | None:intergenic |
| ACGCAGAGGCAGAGAACAAT+TGG | 0.449091 | 8.1:-45525257 | MS.gene34711:CDS |
| TTCGTGTGCCCTCCTCGAAT+GGG | 0.453967 | 8.1:-45524692 | MS.gene34711:CDS |
| AAGCCCAGGAAGATGTGCTC+TGG | 0.455338 | 8.1:-45524331 | MS.gene34711:CDS |
| GCACTTTGGCAATCATTCAA+TGG | 0.457578 | 8.1:+45525057 | None:intergenic |
| AACAAAGTGTGGCTTACAAT+TGG | 0.460894 | 8.1:-45524055 | MS.gene34711:CDS |
| GTCACCCGGGCGTAGTGCTA+GGG | 0.467230 | 8.1:-45524188 | MS.gene34711:CDS |
| TGTTTATAATTGCGCCGTGA+TGG | 0.469236 | 8.1:-45523846 | MS.gene34711:CDS |
| GTTGGAAGGTCGTTCCTGCT+TGG | 0.471319 | 8.1:-45525307 | MS.gene34711:CDS |
| GCAGAACCAAACAAGCATCT+TGG | 0.482493 | 8.1:+45524472 | None:intergenic |
| AGATTGGAATCTTGTTATCA+AGG | 0.484042 | 8.1:-45525141 | MS.gene34711:CDS |
| AAACCCTCGCCATGACTCCT+TGG | 0.487015 | 8.1:+45523947 | None:intergenic |
| GAGGAAGGTTAACAGGAGAT+TGG | 0.488758 | 8.1:-45525157 | MS.gene34711:CDS |
| GAACAGAAGCAGCATCATGC+AGG | 0.492940 | 8.1:-45524907 | MS.gene34711:CDS |
| GTTTATAATTGCGCCGTGAT+GGG | 0.493022 | 8.1:-45523845 | MS.gene34711:CDS |
| TAGAGGTGGTGCCTCGGCTG+TGG | 0.497106 | 8.1:+45524150 | None:intergenic |
| GTCGTTCCTGCTTGGTTCCG+AGG | 0.503606 | 8.1:-45525299 | MS.gene34711:CDS |
| TGCTGCTTCTGTTCATCCGT+CGG | 0.504235 | 8.1:+45524916 | None:intergenic |
| GAGCAGCTTCGATGAACGGT+TGG | 0.506989 | 8.1:-45524018 | MS.gene34711:CDS |
| CCTCGAACAGCGGCTTAGAC+AGG | 0.508091 | 8.1:+45524828 | None:intergenic |
| TTCATCGAAGCTGCTCTCTC+CGG | 0.508226 | 8.1:+45524025 | None:intergenic |
| AGCCCAGGAAGATGTGCTCT+GGG | 0.511106 | 8.1:-45524330 | MS.gene34711:CDS |
| CTGTTAACCTTCCTCGGCTG+CGG | 0.511143 | 8.1:+45525165 | None:intergenic |
| GATAGGCTTATTGTTATTGG+CGG | 0.511196 | 8.1:-45523971 | MS.gene34711:CDS |
| GGTCTTGCATTTAGGGCATG+TGG | 0.511219 | 8.1:-45523995 | MS.gene34711:CDS |
| GTCTTTCATGAAATTCATGC+CGG | 0.514207 | 8.1:-45525235 | MS.gene34711:CDS |
| CGATCCCCTAGCACTACGCC+CGG | 0.523209 | 8.1:+45524183 | None:intergenic |
| CCGAACTTCTTGTGTTTGGG+AGG | 0.526756 | 8.1:-45524570 | MS.gene34711:CDS |
| CTCACCGCAGGTAAGAAGCT+TGG | 0.528534 | 8.1:+45524255 | None:intergenic |
| GACTGTATCTGTATATAACA+TGG | 0.528568 | 8.1:+45524536 | None:intergenic |
| AGAGAGATTGCAATTCTAGC+TGG | 0.531625 | 8.1:-45524442 | MS.gene34711:CDS |
| GATCATAGGCCTCCCATTCG+AGG | 0.531967 | 8.1:+45524680 | None:intergenic |
| CATTGTGGAGGTCCTTCCCT+AGG | 0.532523 | 8.1:+45523902 | None:intergenic |
| CGCCGCTGATTATGCTGACA+TGG | 0.534149 | 8.1:-45524101 | MS.gene34711:CDS |
| ACCCCAGAGCACATCTTCCT+GGG | 0.535814 | 8.1:+45524328 | None:intergenic |
| CCTCCCAAACACAAGAAGTT+CGG | 0.539106 | 8.1:+45524570 | None:intergenic |
| CGGGCGTAGTGCTAGGGGAT+CGG | 0.539496 | 8.1:-45524182 | MS.gene34711:CDS |
| TTCATCCGTCGGCTCGTCAG+TGG | 0.539654 | 8.1:+45524927 | None:intergenic |
| CTACTTGCTAGAAAACAATC+CGG | 0.542893 | 8.1:-45523875 | MS.gene34711:CDS |
| TCATCATCCAGATCGATTTG+CGG | 0.545355 | 8.1:+45525099 | None:intergenic |
| ATCTTGTTATCAAGGTGAGA+TGG | 0.548591 | 8.1:-45525133 | MS.gene34711:CDS |
| TATCGTTGGCGGAGACTGAA+CGG | 0.553625 | 8.1:-45524739 | MS.gene34711:CDS |
| GCAGCTTCGATGAACGGTTG+GGG | 0.555988 | 8.1:-45524016 | MS.gene34711:CDS |
| AGCTACTAGAGGTGGTGCCT+CGG | 0.556190 | 8.1:+45524144 | None:intergenic |
| ACTCAATTCATGGGTTCCTA+GGG | 0.559394 | 8.1:-45523918 | MS.gene34711:CDS |
| CGAACTTCTTGTGTTTGGGA+GGG | 0.560794 | 8.1:-45524569 | MS.gene34711:CDS |
| TATAGAGCTCAGCCGAGTCA+AGG | 0.569597 | 8.1:+45524395 | None:intergenic |
| TAATTCCACTGACGAGCCGA+CGG | 0.571828 | 8.1:-45524932 | MS.gene34711:CDS |
| GATAAGGAGTCTTTAGCGGT+AGG | 0.574089 | 8.1:-45524595 | MS.gene34711:CDS |
| GCTGGTGGTTGTGATTCAGA+TGG | 0.575080 | 8.1:-45524424 | MS.gene34711:CDS |
| GGAGATGCCTGCCACAGCCG+AGG | 0.577171 | 8.1:-45524161 | MS.gene34711:CDS |
| TTCGGATAAGGAGTCTTTAG+CGG | 0.577829 | 8.1:-45524599 | MS.gene34711:CDS |
| ATGATCCAATTCGCGAACGG+TGG | 0.578353 | 8.1:-45524663 | MS.gene34711:CDS |
| TGCTCTGGGGTATTCATGGA+TGG | 0.578417 | 8.1:-45524316 | MS.gene34711:CDS |
| AACAGAAGCAGCATCATGCA+GGG | 0.580432 | 8.1:-45524906 | MS.gene34711:CDS |
| AAACAACCTCGGAACCAAGC+AGG | 0.584981 | 8.1:+45525293 | None:intergenic |
| GAGATTGCAATTCTAGCTGG+TGG | 0.586483 | 8.1:-45524439 | MS.gene34711:CDS |
| ATGAAGATGAACCGCAGCCG+AGG | 0.586920 | 8.1:-45525176 | MS.gene34711:CDS |
| ATTGGCGGACCAAGGAGTCA+TGG | 0.588019 | 8.1:-45523956 | MS.gene34711:CDS |
| GTGTGCCCTCCTCGAATGGG+AGG | 0.588964 | 8.1:-45524689 | MS.gene34711:CDS |
| GAAATTCCTAACATGTCACC+CGG | 0.589237 | 8.1:-45524202 | MS.gene34711:CDS |
| GAGAGAGCAGCTTCGATGAA+CGG | 0.590084 | 8.1:-45524022 | MS.gene34711:CDS |
| CATAATCGGACCTCGAACAG+CGG | 0.595850 | 8.1:+45524818 | None:intergenic |
| GCGGTGAGCTCTATCGTTGG+CGG | 0.596893 | 8.1:-45524750 | MS.gene34711:CDS |
| ACGATAAAGGTAACAAAGTG+TGG | 0.600614 | 8.1:-45524066 | MS.gene34711:CDS |
| TCCCAAACATGATCAAGCCC+AGG | 0.608139 | 8.1:-45524345 | MS.gene34711:CDS |
| AGATGAACCGCAGCCGAGGA+AGG | 0.608999 | 8.1:-45525172 | MS.gene34711:CDS |
| CTGGTGGTTGTGATTCAGAT+GGG | 0.609342 | 8.1:-45524423 | MS.gene34711:CDS |
| AGAAGAAGCAGCTTGATGAT+GGG | 0.610932 | 8.1:-45524963 | MS.gene34711:CDS |
| TCACCCGGGCGTAGTGCTAG+GGG | 0.612909 | 8.1:-45524187 | MS.gene34711:CDS |
| TTCCAGTTCTTGTCACGCAG+AGG | 0.614440 | 8.1:-45525271 | MS.gene34711:CDS |
| ACTCGTGGGAATCTGGAATG+AGG | 0.616994 | 8.1:-45524504 | MS.gene34711:CDS |
| AGATGGGCATATCCTTGACT+CGG | 0.619344 | 8.1:-45524407 | MS.gene34711:CDS |
| GGACCAAGGAGTCATGGCGA+GGG | 0.620296 | 8.1:-45523950 | MS.gene34711:CDS |
| TTATTTACAACAGCTACTAG+AGG | 0.621989 | 8.1:+45524133 | None:intergenic |
| CGGACCAAGGAGTCATGGCG+AGG | 0.624374 | 8.1:-45523951 | MS.gene34711:CDS |
| AATTCTTCAGCATCCCATCA+CGG | 0.624527 | 8.1:+45523832 | None:intergenic |
| TCTGGATGATGATCAGAGGA+AGG | 0.626736 | 8.1:-45525088 | MS.gene34711:CDS |
| AATTCATGGGTTCCTAGGGA+AGG | 0.626927 | 8.1:-45523914 | MS.gene34711:CDS |
| ACTGTATCTGTATATAACAT+GGG | 0.627241 | 8.1:+45524537 | None:intergenic |
| TTTACAACAGCTACTAGAGG+TGG | 0.628438 | 8.1:+45524136 | None:intergenic |
| TGAACGGTATCATAGAGCAC+TGG | 0.630163 | 8.1:-45524723 | MS.gene34711:CDS |
| TTATTGTTATTGGCGGACCA+AGG | 0.631861 | 8.1:-45523964 | MS.gene34711:CDS |
| TAAATTGTACTCCTCACCGC+AGG | 0.632793 | 8.1:+45524243 | None:intergenic |
| ATAACTCCGAGAATCAAACA+TGG | 0.632851 | 8.1:-45524375 | MS.gene34711:CDS |
| GATCCCCTAGCACTACGCCC+GGG | 0.636164 | 8.1:+45524184 | None:intergenic |
| GCAAGTAGATTCCATTGTGG+AGG | 0.637868 | 8.1:+45523890 | None:intergenic |
| TCGATCTGGATGATGATCAG+AGG | 0.644226 | 8.1:-45525092 | MS.gene34711:CDS |
| GGAGCGGTGAGCTCTATCGT+TGG | 0.649703 | 8.1:-45524753 | MS.gene34711:CDS |
| CAAGCTTCTTACCTGCGGTG+AGG | 0.651811 | 8.1:-45524254 | MS.gene34711:CDS |
| ATTGAATGATTGCCAAAGTG+CGG | 0.655209 | 8.1:-45525055 | MS.gene34711:CDS |
| CGCTGATTATGCTGACATGG+AGG | 0.655991 | 8.1:-45524098 | MS.gene34711:CDS |
| GATTCCAAGCTTCTTACCTG+CGG | 0.656931 | 8.1:-45524259 | MS.gene34711:CDS |
| CACCGCTCCGAATTATGCTG+CGG | 0.657732 | 8.1:+45524767 | None:intergenic |
| ATAGGCCTCCCATTCGAGGA+GGG | 0.657950 | 8.1:+45524684 | None:intergenic |
| CTAGGGAAGGACCTCCACAA+TGG | 0.659910 | 8.1:-45523901 | MS.gene34711:CDS |
| CTCCATGTCAGCATAATCAG+CGG | 0.662179 | 8.1:+45524099 | None:intergenic |
| CCTATGATCCAATTCGCGAA+CGG | 0.662545 | 8.1:-45524666 | MS.gene34711:CDS |
| TAACTCCGAGAATCAAACAT+GGG | 0.666523 | 8.1:-45524374 | MS.gene34711:CDS |
| CTAGAATTGCAATCTCTCTG+AGG | 0.668609 | 8.1:+45524446 | None:intergenic |
| CATAGGCCTCCCATTCGAGG+AGG | 0.672969 | 8.1:+45524683 | None:intergenic |
| CTAGCAAGTAGATTCCATTG+TGG | 0.677748 | 8.1:+45523887 | None:intergenic |
| ACAATTTACAGACTAAAACA+TGG | 0.679092 | 8.1:-45524228 | MS.gene34711:CDS |
| CAAGAACTGGAAAACAACCT+CGG | 0.685720 | 8.1:+45525282 | None:intergenic |
| GAGCTGTCTCGATTCATGCG+TGG | 0.690632 | 8.1:+45524856 | None:intergenic |
| AAATTCCTAACATGTCACCC+GGG | 0.697406 | 8.1:-45524201 | MS.gene34711:CDS |
| ACAGAAGCAGCATCATGCAG+GGG | 0.699667 | 8.1:-45524905 | MS.gene34711:CDS |
| GCGGAAGCTCTGATTCAGCG+AGG | 0.705777 | 8.1:+45524786 | None:intergenic |
| GCTGCAAAGACTATGTTGGA+AGG | 0.710611 | 8.1:-45525321 | None:intergenic |
| GCCCAGGAAGATGTGCTCTG+GGG | 0.715567 | 8.1:-45524329 | MS.gene34711:CDS |
| TTCCGCAGCATAATTCGGAG+CGG | 0.727088 | 8.1:-45524769 | MS.gene34711:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATTTTTATGTTATC+GGG | - | chr8.1:45524850-45524869 | MS.gene34711:CDS | 20.0% |
| !!! | GATGGAAATTTTTATGTTAT+CGG | - | chr8.1:45524849-45524868 | MS.gene34711:CDS | 20.0% |
| ! | ACAATTTACAGACTAAAACA+TGG | - | chr8.1:45524919-45524938 | MS.gene34711:CDS | 25.0% |
| ! | ACTGTATCTGTATATAACAT+GGG | + | chr8.1:45524613-45524632 | None:intergenic | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | + | chr8.1:45525294-45525313 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGTTATCG+GGG | - | chr8.1:45524851-45524870 | MS.gene34711:CDS | 25.0% |
| !! | TTTTATCGAACTCAATTCAT+GGG | - | chr8.1:45525220-45525239 | MS.gene34711:CDS | 25.0% |
| CCGGATTTGGAAATAAAAAA+CGG | - | chr8.1:45523931-45523950 | MS.gene34711:CDS | 30.0% | |
| GAAATAAAAAACGGTAAACG+AGG | - | chr8.1:45523940-45523959 | MS.gene34711:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | + | chr8.1:45524614-45524633 | None:intergenic | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | + | chr8.1:45525017-45525036 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | - | chr8.1:45524669-45524688 | MS.gene34711:CDS | 30.0% |
| ! | AGATTGGAATCTTGTTATCA+AGG | - | chr8.1:45524006-45524025 | MS.gene34711:CDS | 30.0% |
| ! | GAGGTTAAAAAGTACGATAA+AGG | - | chr8.1:45525068-45525087 | MS.gene34711:CDS | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | - | chr8.1:45524852-45524871 | MS.gene34711:CDS | 30.0% |
| ! | GTTTTATCGAACTCAATTCA+TGG | - | chr8.1:45525219-45525238 | MS.gene34711:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | + | chr8.1:45523934-45523953 | None:intergenic | 30.0% |
| AACAAAGTGTGGCTTACAAT+TGG | - | chr8.1:45525092-45525111 | MS.gene34711:CDS | 35.0% | |
| ACGATAAAGGTAACAAAGTG+TGG | - | chr8.1:45525081-45525100 | MS.gene34711:CDS | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | - | chr8.1:45524772-45524791 | MS.gene34711:CDS | 35.0% | |
| ATTGAATGATTGCCAAAGTG+CGG | - | chr8.1:45524092-45524111 | MS.gene34711:CDS | 35.0% | |
| GCTTACAATTGGTAGATTAC+CGG | - | chr8.1:45525103-45525122 | MS.gene34711:CDS | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | - | chr8.1:45525173-45525192 | MS.gene34711:CDS | 35.0% | |
| GTCTTTCATGAAATTCATGC+CGG | - | chr8.1:45523912-45523931 | MS.gene34711:CDS | 35.0% | |
| TAACGAATGCTTCATGTGTT+CGG | - | chr8.1:45524530-45524549 | MS.gene34711:CDS | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | - | chr8.1:45524773-45524792 | MS.gene34711:CDS | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | + | chr8.1:45524781-45524800 | None:intergenic | 35.0% | |
| ! | ATCTTGTTATCAAGGTGAGA+TGG | - | chr8.1:45524014-45524033 | MS.gene34711:CDS | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | - | chr8.1:45525272-45525291 | MS.gene34711:CDS | 35.0% |
| ! | GATAGGCTTATTGTTATTGG+CGG | - | chr8.1:45525176-45525195 | MS.gene34711:CDS | 35.0% |
| ! | TTTTATGTTATCGGGGGAAT+TGG | - | chr8.1:45524858-45524877 | MS.gene34711:CDS | 35.0% |
| !!! | TGCTTTTTCTGTCCTGTTTT+TGG | - | chr8.1:45524125-45524144 | MS.gene34711:CDS | 35.0% |
| AAATTCCTAACATGTCACCC+GGG | - | chr8.1:45524946-45524965 | MS.gene34711:CDS | 40.0% | |
| AACTCAATTCATGGGTTCCT+AGG | - | chr8.1:45525228-45525247 | MS.gene34711:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | + | chr8.1:45523991-45524010 | None:intergenic | 40.0% | |
| ACTCAATTCATGGGTTCCTA+GGG | - | chr8.1:45525229-45525248 | MS.gene34711:CDS | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | - | chr8.1:45524705-45524724 | MS.gene34711:CDS | 40.0% | |
| ATGCTTCATGTGTTCGGATA+AGG | - | chr8.1:45524536-45524555 | MS.gene34711:CDS | 40.0% | |
| CAAGAACTGGAAAACAACCT+CGG | + | chr8.1:45523868-45523887 | None:intergenic | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | - | chr8.1:45523918-45523937 | MS.gene34711:CDS | 40.0% | |
| CATTCGTTAGAAGCCATTCT+AGG | + | chr8.1:45524519-45524538 | None:intergenic | 40.0% | |
| CTAGAATTGCAATCTCTCTG+AGG | + | chr8.1:45524704-45524723 | None:intergenic | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | + | chr8.1:45525263-45525282 | None:intergenic | 40.0% | |
| GAAAAATCGCAGCATTCGTT+CGG | - | chr8.1:45524150-45524169 | MS.gene34711:CDS | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | - | chr8.1:45524945-45524964 | MS.gene34711:CDS | 40.0% | |
| GCACTTTGGCAATCATTCAA+TGG | + | chr8.1:45524093-45524112 | None:intergenic | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | - | chr8.1:45524574-45524593 | MS.gene34711:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | - | chr8.1:45524503-45524522 | MS.gene34711:CDS | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | - | chr8.1:45525302-45525321 | MS.gene34711:CDS | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | - | chr8.1:45525301-45525320 | MS.gene34711:CDS | 40.0% | |
| TTCGGATAAGGAGTCTTTAG+CGG | - | chr8.1:45524548-45524567 | MS.gene34711:CDS | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | + | chr8.1:45525014-45525033 | None:intergenic | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | - | chr8.1:45524628-45524647 | MS.gene34711:CDS | 40.0% |
| ! | AGAAGAAGCAGCTTGATGAT+GGG | - | chr8.1:45524184-45524203 | MS.gene34711:CDS | 40.0% |
| ! | CAACAACATTTTCCGCACTT+TGG | + | chr8.1:45524107-45524126 | None:intergenic | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | - | chr8.1:45524629-45524648 | MS.gene34711:CDS | 40.0% |
| ! | TTATTGTTATTGGCGGACCA+AGG | - | chr8.1:45525183-45525202 | MS.gene34711:CDS | 40.0% |
| !! | GCGATTTTTCAGCCAAAAAC+AGG | + | chr8.1:45524140-45524159 | None:intergenic | 40.0% |
| !! | TCATCATCCAGATCGATTTG+CGG | + | chr8.1:45524051-45524070 | None:intergenic | 40.0% |
| AACAGAAGCAGCATCATGCA+GGG | - | chr8.1:45524241-45524260 | MS.gene34711:CDS | 45.0% | |
| AATTCATGGGTTCCTAGGGA+AGG | - | chr8.1:45525233-45525252 | MS.gene34711:CDS | 45.0% | |
| AGAGCTTCCGCAGCATAATT+CGG | - | chr8.1:45524373-45524392 | MS.gene34711:CDS | 45.0% | |
| AGATGGGCATATCCTTGACT+CGG | - | chr8.1:45524740-45524759 | MS.gene34711:CDS | 45.0% | |
| CAGAAGAAGCAGCTTGATGA+TGG | - | chr8.1:45524183-45524202 | MS.gene34711:CDS | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | - | chr8.1:45524481-45524500 | MS.gene34711:CDS | 45.0% | |
| CCTCCCAAACACAAGAAGTT+CGG | + | chr8.1:45524580-45524599 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | - | chr8.1:45524578-45524597 | MS.gene34711:CDS | 45.0% | |
| CGAGGCAAGTGAACCATAAT+CGG | + | chr8.1:45524346-45524365 | None:intergenic | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | + | chr8.1:45525051-45525070 | None:intergenic | 45.0% | |
| CTGGTGGTTGTGATTCAGAT+GGG | - | chr8.1:45524724-45524743 | MS.gene34711:CDS | 45.0% | |
| GAGGAAGGTTAACAGGAGAT+TGG | - | chr8.1:45523990-45524009 | MS.gene34711:CDS | 45.0% | |
| GATAAGGAGTCTTTAGCGGT+AGG | - | chr8.1:45524552-45524571 | MS.gene34711:CDS | 45.0% | |
| GATTCCAAGCTTCTTACCTG+CGG | - | chr8.1:45524888-45524907 | MS.gene34711:CDS | 45.0% | |
| GCAAGTAGATTCCATTGTGG+AGG | + | chr8.1:45525260-45525279 | None:intergenic | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | + | chr8.1:45524678-45524697 | None:intergenic | 45.0% | |
| TAAATTGTACTCCTCACCGC+AGG | + | chr8.1:45524907-45524926 | None:intergenic | 45.0% | |
| TATGTTATCGGGGGAATTGG+TGG | - | chr8.1:45524861-45524880 | MS.gene34711:CDS | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | + | chr8.1:45524806-45524825 | None:intergenic | 45.0% | |
| TCGATCTGGATGATGATCAG+AGG | - | chr8.1:45524055-45524074 | MS.gene34711:CDS | 45.0% | |
| TCTGGATGATGATCAGAGGA+AGG | - | chr8.1:45524059-45524078 | MS.gene34711:CDS | 45.0% | |
| TGAACGGTATCATAGAGCAC+TGG | - | chr8.1:45524424-45524443 | MS.gene34711:CDS | 45.0% | |
| TGTTGTTCCGCAAATCGATC+TGG | - | chr8.1:45524041-45524060 | MS.gene34711:CDS | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | + | chr8.1:45524807-45524826 | None:intergenic | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | - | chr8.1:45524636-45524655 | MS.gene34711:CDS | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | - | chr8.1:45525159-45525178 | MS.gene34711:CDS | 45.0% |
| ! | GAGATTGCAATTCTAGCTGG+TGG | - | chr8.1:45524708-45524727 | MS.gene34711:CDS | 45.0% |
| ! | GGTACCGAACTTCTTGTGTT+TGG | - | chr8.1:45524573-45524592 | MS.gene34711:CDS | 45.0% |
| AAACAACCTCGGAACCAAGC+AGG | + | chr8.1:45523857-45523876 | None:intergenic | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | - | chr8.1:45524242-45524261 | MS.gene34711:CDS | 50.0% | |
| ACGCAGAGGCAGAGAACAAT+TGG | - | chr8.1:45523890-45523909 | MS.gene34711:CDS | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | - | chr8.1:45525144-45525163 | MS.gene34711:CDS | 50.0% | |
| AGCAGCTTCGATGAACGGTT+GGG | - | chr8.1:45525130-45525149 | MS.gene34711:CDS | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | - | chr8.1:45524484-45524503 | MS.gene34711:CDS | 50.0% | |
| CATAATCGGACCTCGAACAG+CGG | + | chr8.1:45524332-45524351 | None:intergenic | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | - | chr8.1:45524577-45524596 | MS.gene34711:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | + | chr8.1:45524484-45524503 | None:intergenic | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | - | chr8.1:45525145-45525164 | MS.gene34711:CDS | 50.0% | |
| GAACAGAAGCAGCATCATGC+AGG | - | chr8.1:45524240-45524259 | MS.gene34711:CDS | 50.0% | |
| GAGAGAGCAGCTTCGATGAA+CGG | - | chr8.1:45525125-45525144 | MS.gene34711:CDS | 50.0% | |
| GCTGGTGGTTGTGATTCAGA+TGG | - | chr8.1:45524723-45524742 | MS.gene34711:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | - | chr8.1:45524215-45524234 | MS.gene34711:CDS | 50.0% | |
| TATAGAGCTCAGCCGAGTCA+AGG | + | chr8.1:45524755-45524774 | None:intergenic | 50.0% | |
| TATCGTTGGCGGAGACTGAA+CGG | - | chr8.1:45524408-45524427 | MS.gene34711:CDS | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | - | chr8.1:45524802-45524821 | MS.gene34711:CDS | 50.0% | |
| TTCATCGAAGCTGCTCTCTC+CGG | + | chr8.1:45525125-45525144 | None:intergenic | 50.0% | |
| TTCCAGTTCTTGTCACGCAG+AGG | - | chr8.1:45523876-45523895 | MS.gene34711:CDS | 50.0% | |
| TTCCGCAGCATAATTCGGAG+CGG | - | chr8.1:45524378-45524397 | MS.gene34711:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | - | chr8.1:45524643-45524662 | MS.gene34711:CDS | 50.0% |
| ! | CGCTGATTATGCTGACATGG+AGG | - | chr8.1:45525049-45525068 | MS.gene34711:CDS | 50.0% |
| ! | GGTCTTGCATTTAGGGCATG+TGG | - | chr8.1:45525152-45525171 | MS.gene34711:CDS | 50.0% |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | + | chr8.1:45524234-45524253 | None:intergenic | 50.0% |
| !! | GATGTGCTCTGGGGTATTCA+TGG | - | chr8.1:45524827-45524846 | MS.gene34711:CDS | 50.0% |
| !! | TGCTCTGGGGTATTCATGGA+TGG | - | chr8.1:45524831-45524850 | MS.gene34711:CDS | 50.0% |
| AAACCCTCGCCATGACTCCT+TGG | + | chr8.1:45525203-45525222 | None:intergenic | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | - | chr8.1:45524816-45524835 | MS.gene34711:CDS | 55.0% | |
| ACCCCAGAGCACATCTTCCT+GGG | + | chr8.1:45524822-45524841 | None:intergenic | 55.0% | |
| AGCCCAGGAAGATGTGCTCT+GGG | - | chr8.1:45524817-45524836 | MS.gene34711:CDS | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | + | chr8.1:45525006-45525025 | None:intergenic | 55.0% | |
| ATAGGCCTCCCATTCGAGGA+GGG | + | chr8.1:45524466-45524485 | None:intergenic | 55.0% | |
| ATGAAGATGAACCGCAGCCG+AGG | - | chr8.1:45523971-45523990 | MS.gene34711:CDS | 55.0% | |
| CAAGCTTCTTACCTGCGGTG+AGG | - | chr8.1:45524893-45524912 | MS.gene34711:CDS | 55.0% | |
| CACCGCTCCGAATTATGCTG+CGG | + | chr8.1:45524383-45524402 | None:intergenic | 55.0% | |
| CATTGTGGAGGTCCTTCCCT+AGG | + | chr8.1:45525248-45525267 | None:intergenic | 55.0% | |
| CGCTGTTCGAGGTCCGATTA+TGG | - | chr8.1:45524330-45524349 | MS.gene34711:CDS | 55.0% | |
| CTAGGGAAGGACCTCCACAA+TGG | - | chr8.1:45525246-45525265 | MS.gene34711:CDS | 55.0% | |
| CTCACCGCAGGTAAGAAGCT+TGG | + | chr8.1:45524895-45524914 | None:intergenic | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+CGG | + | chr8.1:45523985-45524004 | None:intergenic | 55.0% | |
| GAGCAGCTTCGATGAACGGT+TGG | - | chr8.1:45525129-45525148 | MS.gene34711:CDS | 55.0% | |
| GAGCTGTCTCGATTCATGCG+TGG | + | chr8.1:45524294-45524313 | None:intergenic | 55.0% | |
| GATCATAGGCCTCCCATTCG+AGG | + | chr8.1:45524470-45524489 | None:intergenic | 55.0% | |
| GCAGCTTCGATGAACGGTTG+GGG | - | chr8.1:45525131-45525150 | MS.gene34711:CDS | 55.0% | |
| GTTGGAAGGTCGTTCCTGCT+TGG | - | chr8.1:45523840-45523859 | MS.gene34711:CDS | 55.0% | |
| TACCCCAGAGCACATCTTCC+TGG | + | chr8.1:45524823-45524842 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | + | chr8.1:45524492-45524511 | None:intergenic | 55.0% | |
| TGCCTCTGCGTGACAAGAAC+TGG | + | chr8.1:45523881-45523900 | None:intergenic | 55.0% | |
| TTCGTGTGCCCTCCTCGAAT+GGG | - | chr8.1:45524455-45524474 | MS.gene34711:CDS | 55.0% | |
| TTTCGTGTGCCCTCCTCGAA+TGG | - | chr8.1:45524454-45524473 | MS.gene34711:CDS | 55.0% | |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | - | chr8.1:45525191-45525210 | MS.gene34711:CDS | 55.0% |
| ! | CGCCGCTGATTATGCTGACA+TGG | - | chr8.1:45525046-45525065 | MS.gene34711:CDS | 55.0% |
| AGATGAACCGCAGCCGAGGA+AGG | - | chr8.1:45523975-45523994 | MS.gene34711:CDS | 60.0% | |
| CATAGGCCTCCCATTCGAGG+AGG | + | chr8.1:45524467-45524486 | None:intergenic | 60.0% | |
| CCTCGAACAGCGGCTTAGAC+AGG | + | chr8.1:45524322-45524341 | None:intergenic | 60.0% | |
| CCTGTCTAAGCCGCTGTTCG+AGG | - | chr8.1:45524319-45524338 | MS.gene34711:CDS | 60.0% | |
| CGCAGCCGAGGAAGGTTAAC+AGG | - | chr8.1:45523983-45524002 | MS.gene34711:CDS | 60.0% | |
| CTACGCCCGGGTGACATGTT+AGG | + | chr8.1:45524954-45524973 | None:intergenic | 60.0% | |
| GCCCAGGAAGATGTGCTCTG+GGG | - | chr8.1:45524818-45524837 | MS.gene34711:CDS | 60.0% | |
| GCGGTGAGCTCTATCGTTGG+CGG | - | chr8.1:45524397-45524416 | MS.gene34711:CDS | 60.0% | |
| GGACCAAGGAGTCATGGCGA+GGG | - | chr8.1:45525197-45525216 | MS.gene34711:CDS | 60.0% | |
| GGAGCGGTGAGCTCTATCGT+TGG | - | chr8.1:45524394-45524413 | MS.gene34711:CDS | 60.0% | |
| GTCGTTCCTGCTTGGTTCCG+AGG | - | chr8.1:45523848-45523867 | MS.gene34711:CDS | 60.0% | |
| ! | GCGGAAGCTCTGATTCAGCG+AGG | + | chr8.1:45524364-45524383 | None:intergenic | 60.0% |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | + | chr8.1:45524223-45524242 | None:intergenic | 60.0% |
| CGATCCCCTAGCACTACGCC+CGG | + | chr8.1:45524967-45524986 | None:intergenic | 65.0% | |
| CGGACCAAGGAGTCATGGCG+AGG | - | chr8.1:45525196-45525215 | MS.gene34711:CDS | 65.0% | |
| CGGGCGTAGTGCTAGGGGAT+CGG | - | chr8.1:45524965-45524984 | MS.gene34711:CDS | 65.0% | |
| GATCCCCTAGCACTACGCCC+GGG | + | chr8.1:45524966-45524985 | None:intergenic | 65.0% | |
| GTCACCCGGGCGTAGTGCTA+GGG | - | chr8.1:45524959-45524978 | MS.gene34711:CDS | 65.0% | |
| GTGTGCCCTCCTCGAATGGG+AGG | - | chr8.1:45524458-45524477 | MS.gene34711:CDS | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | + | chr8.1:45525000-45525019 | None:intergenic | 65.0% | |
| TCACCCGGGCGTAGTGCTAG+GGG | - | chr8.1:45524960-45524979 | MS.gene34711:CDS | 65.0% | |
| TGTCACCCGGGCGTAGTGCT+AGG | - | chr8.1:45524958-45524977 | MS.gene34711:CDS | 65.0% | |
| GGAGATGCCTGCCACAGCCG+AGG | - | chr8.1:45524986-45525005 | MS.gene34711:CDS | 70.0% | |
| GGTGGTGCCTCGGCTGTGGC+AGG | + | chr8.1:45524996-45525015 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 45523838 | 45525331 | 45523838 | ID=MS.gene34711 |
| chr8.1 | mRNA | 45523838 | 45525331 | 45523838 | ID=MS.gene34711.t1;Parent=MS.gene34711 |
| chr8.1 | exon | 45523838 | 45525331 | 45523838 | ID=MS.gene34711.t1.exon1;Parent=MS.gene34711.t1 |
| chr8.1 | CDS | 45523838 | 45525331 | 45523838 | ID=cds.MS.gene34711.t1;Parent=MS.gene34711.t1 |
| Gene Sequence |
| Protein sequence |
