Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63251.t1 | XP_013445739.1 | 98.8 | 497 | 6 | 0 | 1 | 497 | 1 | 497 | 5.40E-269 | 936.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63251.t1 | Q8L736 | 58.0 | 507 | 163 | 8 | 1 | 497 | 1 | 467 | 2.5e-137 | 490.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63251.t1 | A0A072U1V1 | 98.8 | 497 | 6 | 0 | 1 | 497 | 1 | 497 | 3.9e-269 | 936.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013419 | MS.gene63251 | PPI |
| MS.gene91909 | MS.gene63251 | PPI |
| MS.gene06516 | MS.gene63251 | PPI |
| MS.gene059347 | MS.gene63251 | PPI |
| MS.gene25443 | MS.gene63251 | PPI |
| MS.gene83931 | MS.gene63251 | PPI |
| MS.gene049391 | MS.gene63251 | PPI |
| MS.gene055886 | MS.gene63251 | PPI |
| MS.gene34711 | MS.gene63251 | PPI |
| MS.gene032830 | MS.gene63251 | PPI |
| MS.gene074027 | MS.gene63251 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63251.t1 | MTR_8g468030 | 98.793 | 497 | 6 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1023 |
| MS.gene63251.t1 | MTR_5g039390 | 73.137 | 510 | 90 | 7 | 1 | 497 | 1 | 476 | 0.0 | 745 |
| MS.gene63251.t1 | MTR_4g108280 | 62.803 | 371 | 135 | 2 | 130 | 497 | 10 | 380 | 4.57e-175 | 497 |
| MS.gene63251.t1 | MTR_0345s0010 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 5.21e-164 | 471 |
| MS.gene63251.t1 | MTR_0105s0170 | 62.323 | 353 | 132 | 1 | 145 | 497 | 97 | 448 | 3.75e-163 | 469 |
| MS.gene63251.t1 | MTR_0105s0130 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 4.92e-163 | 469 |
| MS.gene63251.t1 | MTR_0105s0040 | 62.323 | 353 | 132 | 1 | 145 | 497 | 182 | 533 | 2.60e-162 | 471 |
| MS.gene63251.t1 | MTR_0105s0020 | 61.473 | 353 | 135 | 1 | 145 | 497 | 84 | 435 | 2.63e-162 | 467 |
| MS.gene63251.t1 | MTR_4g022260 | 61.944 | 360 | 136 | 1 | 138 | 497 | 59 | 417 | 2.88e-162 | 466 |
| MS.gene63251.t1 | MTR_0496s0010 | 60.833 | 360 | 134 | 2 | 138 | 497 | 59 | 411 | 1.37e-160 | 461 |
| MS.gene63251.t1 | MTR_1330s0010 | 61.960 | 347 | 131 | 1 | 145 | 491 | 97 | 442 | 4.49e-159 | 459 |
| MS.gene63251.t1 | MTR_4g022400 | 60.169 | 354 | 140 | 1 | 144 | 497 | 62 | 414 | 3.41e-154 | 445 |
| MS.gene63251.t1 | MTR_2g094093 | 51.130 | 354 | 160 | 4 | 149 | 497 | 19 | 364 | 4.77e-117 | 349 |
| MS.gene63251.t1 | MTR_7g029290 | 36.031 | 383 | 217 | 10 | 122 | 495 | 38 | 401 | 5.53e-67 | 221 |
| MS.gene63251.t1 | MTR_6g023805 | 37.466 | 363 | 193 | 8 | 151 | 495 | 57 | 403 | 5.11e-64 | 213 |
| MS.gene63251.t1 | MTR_0105s0060 | 62.637 | 91 | 34 | 0 | 407 | 497 | 15 | 105 | 1.67e-36 | 130 |
| MS.gene63251.t1 | MTR_3g085570 | 27.306 | 271 | 168 | 8 | 124 | 373 | 5 | 267 | 2.01e-21 | 96.3 |
| MS.gene63251.t1 | MTR_8g080370 | 26.531 | 245 | 155 | 6 | 146 | 373 | 47 | 283 | 3.34e-16 | 80.9 |
| MS.gene63251.t1 | MTR_4g114110 | 25.649 | 308 | 200 | 10 | 126 | 422 | 58 | 347 | 5.09e-16 | 80.5 |
| MS.gene63251.t1 | MTR_3g073640 | 24.642 | 349 | 187 | 12 | 150 | 429 | 43 | 384 | 5.21e-16 | 80.9 |
| MS.gene63251.t1 | MTR_8g085600 | 26.056 | 284 | 182 | 9 | 150 | 422 | 77 | 343 | 1.12e-15 | 79.7 |
| MS.gene63251.t1 | MTR_2g008440 | 24.438 | 356 | 190 | 11 | 146 | 429 | 39 | 387 | 1.21e-14 | 76.6 |
| MS.gene63251.t1 | MTR_4g011900 | 22.255 | 337 | 220 | 7 | 150 | 460 | 5 | 325 | 1.34e-14 | 75.5 |
| MS.gene63251.t1 | MTR_7g095220 | 21.605 | 324 | 207 | 7 | 148 | 454 | 2 | 295 | 1.44e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63251.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene63251.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene63251.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene63251.t1 | AT1G14330 | 69.841 | 378 | 108 | 3 | 123 | 497 | 67 | 441 | 0.0 | 541 |
| MS.gene63251.t1 | AT1G26930 | 67.935 | 368 | 115 | 1 | 133 | 497 | 54 | 421 | 0.0 | 525 |
| MS.gene63251.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.99e-169 | 484 |
| MS.gene63251.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.99e-169 | 484 |
| MS.gene63251.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.99e-169 | 484 |
| MS.gene63251.t1 | AT1G26930 | 57.609 | 368 | 101 | 2 | 133 | 497 | 54 | 369 | 9.25e-147 | 425 |
| MS.gene63251.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.87e-109 | 330 |
| MS.gene63251.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.87e-109 | 330 |
| MS.gene63251.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 1.87e-109 | 330 |
| MS.gene63251.t1 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.25e-63 | 213 |
| MS.gene63251.t1 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.25e-63 | 213 |
| MS.gene63251.t1 | AT5G40680 | 33.611 | 360 | 222 | 6 | 146 | 495 | 61 | 413 | 3.95e-59 | 201 |
| MS.gene63251.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.57e-22 | 98.2 |
| MS.gene63251.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.57e-22 | 98.2 |
| MS.gene63251.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.38e-20 | 94.0 |
| MS.gene63251.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.38e-20 | 94.0 |
| MS.gene63251.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.38e-20 | 94.0 |
| MS.gene63251.t1 | AT1G15670 | 25.937 | 347 | 208 | 13 | 150 | 466 | 3 | 330 | 2.34e-17 | 84.0 |
| MS.gene63251.t1 | AT1G55270 | 25.352 | 284 | 184 | 10 | 150 | 422 | 78 | 344 | 1.13e-15 | 79.7 |
| MS.gene63251.t1 | AT1G80440 | 24.924 | 329 | 211 | 11 | 150 | 457 | 3 | 316 | 1.07e-13 | 72.8 |
| MS.gene63251.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 2 | 214 | 2.56e-13 | 71.6 |
| MS.gene63251.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 2.90e-13 | 71.6 |
| MS.gene63251.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 2.90e-13 | 71.6 |
Find 144 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATTCATGCCGGATT+TGG | 0.208968 | 8.4:-42472370 | MS.gene63251:CDS |
| GGAGATAGGCTTATTGTTAT+TGG | 0.237398 | 8.4:-42471115 | MS.gene63251:CDS |
| TTCCTGGGCTTGATCATGTT+TGG | 0.245172 | 8.4:+42471484 | None:intergenic |
| ACGGTTGGGGTCTTGCATTT+AGG | 0.270827 | 8.4:-42471144 | MS.gene63251:CDS |
| TCCTGGGCTTGATCATGTTT+GGG | 0.274266 | 8.4:+42471485 | None:intergenic |
| CGGTTGGGGTCTTGCATTTA+GGG | 0.286736 | 8.4:-42471143 | MS.gene63251:CDS |
| TGCATCCACCGTTCGCGAAT+TGG | 0.289308 | 8.4:+42471799 | None:intergenic |
| TTGACAAACTCGTGGGAATC+TGG | 0.303822 | 8.4:-42471652 | MS.gene63251:CDS |
| GGTACCGAACTTCTTGTGTT+TGG | 0.310632 | 8.4:-42471715 | MS.gene63251:CDS |
| CATTCGTTAGAAGCCATTCT+AGG | 0.314758 | 8.4:+42471772 | None:intergenic |
| CGTTGTTCGAGGTCCGATTA+TGG | 0.329116 | 8.4:-42471958 | MS.gene63251:CDS |
| TTTCCTGTGCTCTCCTTGAA+TGG | 0.332326 | 8.4:-42471834 | MS.gene63251:CDS |
| ACGATAAAGGTAACAAAGTA+TGG | 0.334348 | 8.4:-42471207 | MS.gene63251:CDS |
| TACTCCAGAGCACATCTTCC+TGG | 0.335010 | 8.4:+42471468 | None:intergenic |
| CATTTAGGGCATGTGGAGAT+AGG | 0.347335 | 8.4:-42471129 | MS.gene63251:CDS |
| GTACCGAACTTCTTGTGTTT+GGG | 0.354894 | 8.4:-42471714 | MS.gene63251:CDS |
| CGCAGCCGAGGAAGGTTAAC+AGG | 0.363634 | 8.4:-42472305 | MS.gene63251:CDS |
| TGCCTCTGCCTGACAAGAAC+TGG | 0.372108 | 8.4:+42472410 | None:intergenic |
| CCGTTCGCGAATTGGATCAT+AGG | 0.379832 | 8.4:+42471807 | None:intergenic |
| TGTTTCCCATGTTTGATTCT+CGG | 0.387447 | 8.4:+42471510 | None:intergenic |
| TTCCTGTGCTCTCCTTGAAT+GGG | 0.390822 | 8.4:-42471833 | MS.gene63251:CDS |
| GCTTACAATTGGTAGATTAC+CGG | 0.406813 | 8.4:-42471185 | MS.gene63251:CDS |
| AGAGCTTCCGCAACATAATT+CGG | 0.411413 | 8.4:-42471915 | MS.gene63251:CDS |
| CGAGGCAAGTGAACCATAAT+CGG | 0.416718 | 8.4:+42471945 | None:intergenic |
| TAACGAATGCTTCATGTGTT+CGG | 0.419509 | 8.4:-42471758 | MS.gene63251:CDS |
| CAGAAGAAGCAGCTTGATGA+TGG | 0.421720 | 8.4:-42472105 | MS.gene63251:CDS |
| TGTCACCCGGGCGTAGTGCT+AGG | 0.424613 | 8.4:-42471330 | MS.gene63251:CDS |
| CTACGCCCGGGTGACATGTT+AGG | 0.424620 | 8.4:+42471337 | None:intergenic |
| CCTGTCTAAGCCGTTGTTCG+AGG | 0.429093 | 8.4:-42471969 | MS.gene63251:CDS |
| AATCTCCTGTTAACCTTCCT+CGG | 0.429428 | 8.4:+42472300 | None:intergenic |
| TGTTGTTCCGCAAATCGATC+TGG | 0.429697 | 8.4:-42472247 | MS.gene63251:CDS |
| AGGCAGAGGCAGAGAACAAT+TGG | 0.435851 | 8.4:-42472398 | MS.gene63251:CDS |
| ATGCTTCATGTGTTCGGATA+AGG | 0.437733 | 8.4:-42471752 | MS.gene63251:CDS |
| GTGGATGCATTTACCTAGAA+TGG | 0.438443 | 8.4:-42471785 | MS.gene63251:CDS |
| AGCGGCTTCGATGAACGGTT+GGG | 0.439895 | 8.4:-42471158 | MS.gene63251:CDS |
| GCAATTATAAACAAAGTTAC+CGG | 0.440298 | 8.4:+42470997 | None:intergenic |
| GGTGGTGCCTCGGCTGTGGC+AGG | 0.444795 | 8.4:+42471295 | None:intergenic |
| ACACTTTGGCAATCATTCAA+TGG | 0.458613 | 8.4:+42472198 | None:intergenic |
| GTCACCCGGGCGTAGTGCTA+GGG | 0.467230 | 8.4:-42471329 | MS.gene63251:CDS |
| TTCCAGTTCTTGTCAGGCAG+AGG | 0.467981 | 8.4:-42472412 | MS.gene63251:CDS |
| GATCATAGGCCTCCCATTCA+AGG | 0.469228 | 8.4:+42471821 | None:intergenic |
| TGTTTATAATTGCGCCGTGA+TGG | 0.469236 | 8.4:-42470987 | MS.gene63251:CDS |
| AACAAAGTATGGCTTACAAT+TGG | 0.470901 | 8.4:-42471196 | MS.gene63251:CDS |
| GATGTGCTCTGGAGTATTCA+TGG | 0.473240 | 8.4:-42471461 | MS.gene63251:CDS |
| GCAGAACCAAACAAGCATCT+TGG | 0.482493 | 8.4:+42471613 | None:intergenic |
| AGATTGGAATCTTGTTATCA+AGG | 0.484042 | 8.4:-42472282 | MS.gene63251:CDS |
| AAACCCTCGCCATGACTCCT+TGG | 0.487015 | 8.4:+42471088 | None:intergenic |
| GAGGAAGGTTAACAGGAGAT+TGG | 0.488758 | 8.4:-42472298 | MS.gene63251:CDS |
| GAACAGAAGCAGCATCATGC+AGG | 0.492940 | 8.4:-42472048 | MS.gene63251:CDS |
| GTTTATAATTGCGCCGTGAT+GGG | 0.493022 | 8.4:-42470986 | MS.gene63251:CDS |
| TAGAGGTGGTGCCTCGGCTG+TGG | 0.497106 | 8.4:+42471291 | None:intergenic |
| CCTCGAACAACGGCTTAGAC+AGG | 0.497131 | 8.4:+42471969 | None:intergenic |
| TCCGCAACATAATTCGGAGC+GGG | 0.500356 | 8.4:-42471909 | MS.gene63251:CDS |
| TGCTGCTTCTGTTCATCCGT+CGG | 0.504235 | 8.4:+42472057 | None:intergenic |
| GTTGGAAGGTCGATCCTGCT+TGG | 0.505926 | 8.4:-42472448 | MS.gene63251:CDS |
| AAGCCCAGGAAGATGTGCTC+TGG | 0.506695 | 8.4:-42471472 | MS.gene63251:CDS |
| CTGTTAACCTTCCTCGGCTG+CGG | 0.511143 | 8.4:+42472306 | None:intergenic |
| GATAGGCTTATTGTTATTGG+CGG | 0.511196 | 8.4:-42471112 | MS.gene63251:CDS |
| GGTCTTGCATTTAGGGCATG+TGG | 0.511219 | 8.4:-42471136 | MS.gene63251:CDS |
| TTCATCGAAGCCGCTCTCTC+CGG | 0.512302 | 8.4:+42471166 | None:intergenic |
| GTCGATCCTGCTTGGTTCCG+AGG | 0.512977 | 8.4:-42472440 | MS.gene63251:CDS |
| GAGCGGCTTCGATGAACGGT+TGG | 0.513906 | 8.4:-42471159 | MS.gene63251:CDS |
| GTCTTTCATGAAATTCATGC+CGG | 0.514207 | 8.4:-42472376 | MS.gene63251:CDS |
| CGATCCCCTAGCACTACGCC+CGG | 0.523209 | 8.4:+42471324 | None:intergenic |
| CCGAACTTCTTGTGTTTGGG+AGG | 0.526756 | 8.4:-42471711 | MS.gene63251:CDS |
| CATTGTGGAGGTCCTTCACT+AGG | 0.527917 | 8.4:+42471043 | None:intergenic |
| GACTGTATCTGTATATAACA+TGG | 0.528568 | 8.4:+42471677 | None:intergenic |
| CTGTGCTCTCCTTGAATGGG+AGG | 0.530767 | 8.4:-42471830 | MS.gene63251:CDS |
| AGAGAGATTGCAATTCTAGC+TGG | 0.531625 | 8.4:-42471583 | MS.gene63251:CDS |
| CGCCGCTGATTATGCTGACA+TGG | 0.534149 | 8.4:-42471242 | MS.gene63251:CDS |
| GCGGCTTCGATGAACGGTTG+GGG | 0.537768 | 8.4:-42471157 | MS.gene63251:CDS |
| CCTCCCAAACACAAGAAGTT+CGG | 0.539106 | 8.4:+42471711 | None:intergenic |
| CGGGCGTAGTGCTAGGGGAT+CGG | 0.539496 | 8.4:-42471323 | MS.gene63251:CDS |
| TTCATCCGTCGGCTCGTCAG+TGG | 0.539654 | 8.4:+42472068 | None:intergenic |
| CTCACCGCACGTAAGAAGCT+TGG | 0.540953 | 8.4:+42471396 | None:intergenic |
| GAGAGAGCGGCTTCGATGAA+CGG | 0.541952 | 8.4:-42471163 | MS.gene63251:CDS |
| CTACTTGCTAGAAAACAATC+CGG | 0.542893 | 8.4:-42471016 | MS.gene63251:CDS |
| TCATCATCCAGATCGATTTG+CGG | 0.545355 | 8.4:+42472240 | None:intergenic |
| ATCTTGTTATCAAGGTGAGA+TGG | 0.548591 | 8.4:-42472274 | MS.gene63251:CDS |
| CATAATCGGACCTCGAACAA+CGG | 0.554013 | 8.4:+42471959 | None:intergenic |
| ACTCCAGAGCACATCTTCCT+GGG | 0.555950 | 8.4:+42471469 | None:intergenic |
| AGCTACTAGAGGTGGTGCCT+CGG | 0.556190 | 8.4:+42471285 | None:intergenic |
| CGAACTTCTTGTGTTTGGGA+GGG | 0.560794 | 8.4:-42471710 | MS.gene63251:CDS |
| GCGGGGAGCTCTATCGTTGG+AGG | 0.563459 | 8.4:-42471891 | MS.gene63251:CDS |
| ATTCTCGGAGTTATAGAGCT+CGG | 0.569093 | 8.4:+42471525 | None:intergenic |
| TAATTCCACTGACGAGCCGA+CGG | 0.571828 | 8.4:-42472073 | MS.gene63251:CDS |
| GATAAGGAGTCTTTAGCGGT+AGG | 0.574089 | 8.4:-42471736 | MS.gene63251:CDS |
| GCTGGTGGTTGTGATTCAGA+TGG | 0.575080 | 8.4:-42471565 | MS.gene63251:CDS |
| GGAGATGCCTGCCACAGCCG+AGG | 0.577171 | 8.4:-42471302 | MS.gene63251:CDS |
| TTCGGATAAGGAGTCTTTAG+CGG | 0.577829 | 8.4:-42471740 | MS.gene63251:CDS |
| ATGATCCAATTCGCGAACGG+TGG | 0.578353 | 8.4:-42471804 | MS.gene63251:CDS |
| AACAGAAGCAGCATCATGCA+GGG | 0.580432 | 8.4:-42472047 | MS.gene63251:CDS |
| CTCCCATTCAAGGAGAGCAC+AGG | 0.580495 | 8.4:+42471831 | None:intergenic |
| TATAGAGCTCGGCCGAGTCA+AGG | 0.584279 | 8.4:+42471536 | None:intergenic |
| AAACAACCTCGGAACCAAGC+AGG | 0.584981 | 8.4:+42472434 | None:intergenic |
| GAGATTGCAATTCTAGCTGG+TGG | 0.586483 | 8.4:-42471580 | MS.gene63251:CDS |
| ATGAAGATGAACCGCAGCCG+AGG | 0.586920 | 8.4:-42472317 | MS.gene63251:CDS |
| ATTGGCGGACCAAGGAGTCA+TGG | 0.588019 | 8.4:-42471097 | MS.gene63251:CDS |
| TGGTAGATTACCGGAGAGAG+CGG | 0.588730 | 8.4:-42471176 | MS.gene63251:CDS |
| GAAATTCCTAACATGTCACC+CGG | 0.589237 | 8.4:-42471343 | MS.gene63251:CDS |
| TGCTCTGGAGTATTCATGGA+TGG | 0.599156 | 8.4:-42471457 | MS.gene63251:CDS |
| TCCCAAACATGATCAAGCCC+AGG | 0.608139 | 8.4:-42471486 | MS.gene63251:CDS |
| AGATGAACCGCAGCCGAGGA+AGG | 0.608999 | 8.4:-42472313 | MS.gene63251:CDS |
| CTGGTGGTTGTGATTCAGAT+GGG | 0.609342 | 8.4:-42471564 | MS.gene63251:CDS |
| AGAAGAAGCAGCTTGATGAT+GGG | 0.610932 | 8.4:-42472104 | MS.gene63251:CDS |
| TCACCCGGGCGTAGTGCTAG+GGG | 0.612909 | 8.4:-42471328 | MS.gene63251:CDS |
| ACTCGTGGGAATCTGGAATG+AGG | 0.616994 | 8.4:-42471645 | MS.gene63251:CDS |
| GGACCAAGGAGTCATGGCGA+GGG | 0.620296 | 8.4:-42471091 | MS.gene63251:CDS |
| TTATTTACAACAGCTACTAG+AGG | 0.621989 | 8.4:+42471274 | None:intergenic |
| CGGACCAAGGAGTCATGGCG+AGG | 0.624374 | 8.4:-42471092 | MS.gene63251:CDS |
| AATTCATGGGTTCCTAGTGA+AGG | 0.624631 | 8.4:-42471055 | MS.gene63251:CDS |
| AATTCTTCAGCATCCCATCA+CGG | 0.626137 | 8.4:+42470973 | None:intergenic |
| TCTGGATGATGATCAGAGGA+AGG | 0.626736 | 8.4:-42472229 | MS.gene63251:CDS |
| ACTGTATCTGTATATAACAT+GGG | 0.627241 | 8.4:+42471678 | None:intergenic |
| AGATGGGCATATCCTTGACT+CGG | 0.628226 | 8.4:-42471548 | MS.gene63251:CDS |
| GGAGCGGGGAGCTCTATCGT+TGG | 0.628334 | 8.4:-42471894 | MS.gene63251:CDS |
| CCCCGCTCCGAATTATGTTG+CGG | 0.628342 | 8.4:+42471908 | None:intergenic |
| TTTACAACAGCTACTAGAGG+TGG | 0.628438 | 8.4:+42471277 | None:intergenic |
| TGAACGGTATCATAGAGCAC+TGG | 0.630163 | 8.4:-42471864 | MS.gene63251:CDS |
| TTATTGTTATTGGCGGACCA+AGG | 0.631861 | 8.4:-42471105 | MS.gene63251:CDS |
| ATAACTCCGAGAATCAAACA+TGG | 0.632851 | 8.4:-42471516 | MS.gene63251:CDS |
| GATCCCCTAGCACTACGCCC+GGG | 0.636164 | 8.4:+42471325 | None:intergenic |
| GCAAGTAGATTCCATTGTGG+AGG | 0.637868 | 8.4:+42471031 | None:intergenic |
| ACAATCTACAAACTAGAACA+TGG | 0.640702 | 8.4:-42471369 | MS.gene63251:CDS |
| TCGATCTGGATGATGATCAG+AGG | 0.644226 | 8.4:-42472233 | MS.gene63251:CDS |
| CAAGCTTCTTACGTGCGGTG+AGG | 0.646958 | 8.4:-42471395 | MS.gene63251:CDS |
| ATTGAATGATTGCCAAAGTG+TGG | 0.647338 | 8.4:-42472196 | MS.gene63251:CDS |
| CAAGAACTGGAAAACAACCT+CGG | 0.650518 | 8.4:+42472423 | None:intergenic |
| TATCGTTGGAGGAGACTGAA+CGG | 0.652030 | 8.4:-42471880 | MS.gene63251:CDS |
| CCGCAACATAATTCGGAGCG+GGG | 0.652381 | 8.4:-42471908 | MS.gene63251:CDS |
| CGCTGATTATGCTGACATGG+AGG | 0.655991 | 8.4:-42471239 | MS.gene63251:CDS |
| CTCCATGTCAGCATAATCAG+CGG | 0.662179 | 8.4:+42471240 | None:intergenic |
| CCTATGATCCAATTCGCGAA+CGG | 0.662545 | 8.4:-42471807 | MS.gene63251:CDS |
| TAACTCCGAGAATCAAACAT+GGG | 0.666523 | 8.4:-42471515 | MS.gene63251:CDS |
| CTAGAATTGCAATCTCTCTG+AGG | 0.668609 | 8.4:+42471587 | None:intergenic |
| CTAGTGAAGGACCTCCACAA+TGG | 0.672606 | 8.4:-42471042 | MS.gene63251:CDS |
| CTAGCAAGTAGATTCCATTG+TGG | 0.677748 | 8.4:+42471028 | None:intergenic |
| AAATTCCTAACATGTCACCC+GGG | 0.697406 | 8.4:-42471342 | MS.gene63251:CDS |
| ACAGAAGCAGCATCATGCAG+GGG | 0.699667 | 8.4:-42472046 | MS.gene63251:CDS |
| TTCCGCAACATAATTCGGAG+CGG | 0.701393 | 8.4:-42471910 | MS.gene63251:CDS |
| GAGCTGTCCCGATTCATGCG+CGG | 0.706639 | 8.4:+42471997 | None:intergenic |
| GCTGCAAAGACTATGTTGGA+AGG | 0.710611 | 8.4:-42472462 | None:intergenic |
| GATTCCAAGCTTCTTACGTG+CGG | 0.719773 | 8.4:-42471400 | MS.gene63251:CDS |
| GCGGAAGCTCTGATTCAGCG+AGG | 0.753966 | 8.4:+42471927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATTTTTATGTTATC+GGG | - | chr8.4:42471991-42472010 | MS.gene63251:CDS | 20.0% |
| !!! | GATGGAAATTTTTATGTTAT+CGG | - | chr8.4:42471990-42472009 | MS.gene63251:CDS | 20.0% |
| !!! | TTTTATTGAACTCAATTCAT+GGG | - | chr8.4:42472361-42472380 | MS.gene63251:CDS | 20.0% |
| ! | ACTGTATCTGTATATAACAT+GGG | + | chr8.4:42471754-42471773 | None:intergenic | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | + | chr8.4:42472435-42472454 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGTTATCG+GGG | - | chr8.4:42471992-42472011 | MS.gene63251:CDS | 25.0% |
| !!! | GTTTTATTGAACTCAATTCA+TGG | - | chr8.4:42472360-42472379 | MS.gene63251:CDS | 25.0% |
| AACAAAGTATGGCTTACAAT+TGG | - | chr8.4:42472233-42472252 | MS.gene63251:CDS | 30.0% | |
| ACAATCTACAAACTAGAACA+TGG | - | chr8.4:42472060-42472079 | MS.gene63251:CDS | 30.0% | |
| ACGATAAAGGTAACAAAGTA+TGG | - | chr8.4:42472222-42472241 | MS.gene63251:CDS | 30.0% | |
| CCGGATTTGGAAATAAAAAA+CGG | - | chr8.4:42471072-42471091 | MS.gene63251:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | + | chr8.4:42471755-42471774 | None:intergenic | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | + | chr8.4:42472158-42472177 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | - | chr8.4:42471810-42471829 | MS.gene63251:CDS | 30.0% |
| ! | AGATTGGAATCTTGTTATCA+AGG | - | chr8.4:42471147-42471166 | MS.gene63251:CDS | 30.0% |
| ! | GAGGTTAAAAAGTACGATAA+AGG | - | chr8.4:42472209-42472228 | MS.gene63251:CDS | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | - | chr8.4:42471993-42472012 | MS.gene63251:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | + | chr8.4:42471075-42471094 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCTGTCATGTTTT+TGG | - | chr8.4:42471266-42471285 | MS.gene63251:CDS | 30.0% |
| ACACTTTGGCAATCATTCAA+TGG | + | chr8.4:42471234-42471253 | None:intergenic | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | - | chr8.4:42471913-42471932 | MS.gene63251:CDS | 35.0% | |
| ATTGAATGATTGCCAAAGTG+TGG | - | chr8.4:42471233-42471252 | MS.gene63251:CDS | 35.0% | |
| GAAATAAAAAACGGAAAGCG+AGG | - | chr8.4:42471081-42471100 | MS.gene63251:CDS | 35.0% | |
| GCTTACAATTGGTAGATTAC+CGG | - | chr8.4:42472244-42472263 | MS.gene63251:CDS | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | - | chr8.4:42472314-42472333 | MS.gene63251:CDS | 35.0% | |
| GTCTTTCATGAAATTCATGC+CGG | - | chr8.4:42471053-42471072 | MS.gene63251:CDS | 35.0% | |
| TAACGAATGCTTCATGTGTT+CGG | - | chr8.4:42471671-42471690 | MS.gene63251:CDS | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | - | chr8.4:42471914-42471933 | MS.gene63251:CDS | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | + | chr8.4:42471922-42471941 | None:intergenic | 35.0% | |
| ! | ATCTTGTTATCAAGGTGAGA+TGG | - | chr8.4:42471155-42471174 | MS.gene63251:CDS | 35.0% |
| ! | CAACAACATTTTCCACACTT+TGG | + | chr8.4:42471248-42471267 | None:intergenic | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | - | chr8.4:42472413-42472432 | MS.gene63251:CDS | 35.0% |
| ! | GATAGGCTTATTGTTATTGG+CGG | - | chr8.4:42472317-42472336 | MS.gene63251:CDS | 35.0% |
| ! | TTTTATGTTATCGGGGGAAT+CGG | - | chr8.4:42471999-42472018 | MS.gene63251:CDS | 35.0% |
| AAATTCCTAACATGTCACCC+GGG | - | chr8.4:42472087-42472106 | MS.gene63251:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | + | chr8.4:42471132-42471151 | None:intergenic | 40.0% | |
| AATTCATGGGTTCCTAGTGA+AGG | - | chr8.4:42472374-42472393 | MS.gene63251:CDS | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | - | chr8.4:42471846-42471865 | MS.gene63251:CDS | 40.0% | |
| AGAGCTTCCGCAACATAATT+CGG | - | chr8.4:42471514-42471533 | MS.gene63251:CDS | 40.0% | |
| ATGCTTCATGTGTTCGGATA+AGG | - | chr8.4:42471677-42471696 | MS.gene63251:CDS | 40.0% | |
| ATTCTCGGAGTTATAGAGCT+CGG | + | chr8.4:42471907-42471926 | None:intergenic | 40.0% | |
| CAAGAACTGGAAAACAACCT+CGG | + | chr8.4:42471009-42471028 | None:intergenic | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | - | chr8.4:42471059-42471078 | MS.gene63251:CDS | 40.0% | |
| CATTCGTTAGAAGCCATTCT+AGG | + | chr8.4:42471660-42471679 | None:intergenic | 40.0% | |
| CTAGAATTGCAATCTCTCTG+AGG | + | chr8.4:42471845-42471864 | None:intergenic | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | + | chr8.4:42472404-42472423 | None:intergenic | 40.0% | |
| GAAAAATCGCAGCATTCGTT+CGG | - | chr8.4:42471291-42471310 | MS.gene63251:CDS | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | - | chr8.4:42472086-42472105 | MS.gene63251:CDS | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | - | chr8.4:42471715-42471734 | MS.gene63251:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | - | chr8.4:42471644-42471663 | MS.gene63251:CDS | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | - | chr8.4:42472443-42472462 | MS.gene63251:CDS | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | - | chr8.4:42472442-42472461 | MS.gene63251:CDS | 40.0% | |
| TTCGGATAAGGAGTCTTTAG+CGG | - | chr8.4:42471689-42471708 | MS.gene63251:CDS | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | + | chr8.4:42472155-42472174 | None:intergenic | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | - | chr8.4:42471769-42471788 | MS.gene63251:CDS | 40.0% |
| ! | AGAAGAAGCAGCTTGATGAT+GGG | - | chr8.4:42471325-42471344 | MS.gene63251:CDS | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | - | chr8.4:42471770-42471789 | MS.gene63251:CDS | 40.0% |
| ! | TTATTGTTATTGGCGGACCA+AGG | - | chr8.4:42472324-42472343 | MS.gene63251:CDS | 40.0% |
| !! | GTTGTTTTCCAGTTCTTGTC+AGG | - | chr8.4:42471011-42471030 | MS.gene63251:CDS | 40.0% |
| !! | TCATCATCCAGATCGATTTG+CGG | + | chr8.4:42471192-42471211 | None:intergenic | 40.0% |
| AACAGAAGCAGCATCATGCA+GGG | - | chr8.4:42471382-42471401 | MS.gene63251:CDS | 45.0% | |
| AGATGGGCATATCCTTGACT+CGG | - | chr8.4:42471881-42471900 | MS.gene63251:CDS | 45.0% | |
| CAGAAGAAGCAGCTTGATGA+TGG | - | chr8.4:42471324-42471343 | MS.gene63251:CDS | 45.0% | |
| CATAATCGGACCTCGAACAA+CGG | + | chr8.4:42471473-42471492 | None:intergenic | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | - | chr8.4:42471622-42471641 | MS.gene63251:CDS | 45.0% | |
| CCTCCCAAACACAAGAAGTT+CGG | + | chr8.4:42471721-42471740 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | - | chr8.4:42471719-42471738 | MS.gene63251:CDS | 45.0% | |
| CGAGGCAAGTGAACCATAAT+CGG | + | chr8.4:42471487-42471506 | None:intergenic | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | + | chr8.4:42472192-42472211 | None:intergenic | 45.0% | |
| CTGGTGGTTGTGATTCAGAT+GGG | - | chr8.4:42471865-42471884 | MS.gene63251:CDS | 45.0% | |
| GAGGAAGGTTAACAGGAGAT+TGG | - | chr8.4:42471131-42471150 | MS.gene63251:CDS | 45.0% | |
| GATAAGGAGTCTTTAGCGGT+AGG | - | chr8.4:42471693-42471712 | MS.gene63251:CDS | 45.0% | |
| GATTCCAAGCTTCTTACGTG+CGG | - | chr8.4:42472029-42472048 | MS.gene63251:CDS | 45.0% | |
| GCAAGTAGATTCCATTGTGG+AGG | + | chr8.4:42472401-42472420 | None:intergenic | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | + | chr8.4:42471819-42471838 | None:intergenic | 45.0% | |
| TATCGTTGGAGGAGACTGAA+CGG | - | chr8.4:42471549-42471568 | MS.gene63251:CDS | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | + | chr8.4:42471947-42471966 | None:intergenic | 45.0% | |
| TCGATCTGGATGATGATCAG+AGG | - | chr8.4:42471196-42471215 | MS.gene63251:CDS | 45.0% | |
| TCTGGATGATGATCAGAGGA+AGG | - | chr8.4:42471200-42471219 | MS.gene63251:CDS | 45.0% | |
| TGAACGGTATCATAGAGCAC+TGG | - | chr8.4:42471565-42471584 | MS.gene63251:CDS | 45.0% | |
| TGTTGTTCCGCAAATCGATC+TGG | - | chr8.4:42471182-42471201 | MS.gene63251:CDS | 45.0% | |
| TTCCGCAACATAATTCGGAG+CGG | - | chr8.4:42471519-42471538 | MS.gene63251:CDS | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | + | chr8.4:42471948-42471967 | None:intergenic | 45.0% | |
| TTCCTGTGCTCTCCTTGAAT+GGG | - | chr8.4:42471596-42471615 | MS.gene63251:CDS | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | - | chr8.4:42471777-42471796 | MS.gene63251:CDS | 45.0% | |
| TTTCCTGTGCTCTCCTTGAA+TGG | - | chr8.4:42471595-42471614 | MS.gene63251:CDS | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | - | chr8.4:42472300-42472319 | MS.gene63251:CDS | 45.0% |
| ! | GAGATTGCAATTCTAGCTGG+TGG | - | chr8.4:42471849-42471868 | MS.gene63251:CDS | 45.0% |
| ! | GGTACCGAACTTCTTGTGTT+TGG | - | chr8.4:42471714-42471733 | MS.gene63251:CDS | 45.0% |
| !! | GATGTGCTCTGGAGTATTCA+TGG | - | chr8.4:42471968-42471987 | MS.gene63251:CDS | 45.0% |
| !! | TGCTCTGGAGTATTCATGGA+TGG | - | chr8.4:42471972-42471991 | MS.gene63251:CDS | 45.0% |
| AAACAACCTCGGAACCAAGC+AGG | + | chr8.4:42470998-42471017 | None:intergenic | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | - | chr8.4:42471383-42471402 | MS.gene63251:CDS | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | - | chr8.4:42472285-42472304 | MS.gene63251:CDS | 50.0% | |
| ACTCCAGAGCACATCTTCCT+GGG | + | chr8.4:42471963-42471982 | None:intergenic | 50.0% | |
| AGGCAGAGGCAGAGAACAAT+TGG | - | chr8.4:42471031-42471050 | MS.gene63251:CDS | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | - | chr8.4:42471625-42471644 | MS.gene63251:CDS | 50.0% | |
| CATTGTGGAGGTCCTTCACT+AGG | + | chr8.4:42472389-42472408 | None:intergenic | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | - | chr8.4:42471718-42471737 | MS.gene63251:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | + | chr8.4:42471625-42471644 | None:intergenic | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | - | chr8.4:42472286-42472305 | MS.gene63251:CDS | 50.0% | |
| CGTTGTTCGAGGTCCGATTA+TGG | - | chr8.4:42471471-42471490 | MS.gene63251:CDS | 50.0% | |
| CTAGTGAAGGACCTCCACAA+TGG | - | chr8.4:42472387-42472406 | MS.gene63251:CDS | 50.0% | |
| GAACAGAAGCAGCATCATGC+AGG | - | chr8.4:42471381-42471400 | MS.gene63251:CDS | 50.0% | |
| GATCATAGGCCTCCCATTCA+AGG | + | chr8.4:42471611-42471630 | None:intergenic | 50.0% | |
| GCTGGTGGTTGTGATTCAGA+TGG | - | chr8.4:42471864-42471883 | MS.gene63251:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | - | chr8.4:42471356-42471375 | MS.gene63251:CDS | 50.0% | |
| TACTCCAGAGCACATCTTCC+TGG | + | chr8.4:42471964-42471983 | None:intergenic | 50.0% | |
| TATGTTATCGGGGGAATCGG+TGG | - | chr8.4:42472002-42472021 | MS.gene63251:CDS | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | - | chr8.4:42471943-42471962 | MS.gene63251:CDS | 50.0% | |
| TCCGCAACATAATTCGGAGC+GGG | - | chr8.4:42471520-42471539 | MS.gene63251:CDS | 50.0% | |
| TGGTAGATTACCGGAGAGAG+CGG | - | chr8.4:42472253-42472272 | MS.gene63251:CDS | 50.0% | |
| TTCCAGTTCTTGTCAGGCAG+AGG | - | chr8.4:42471017-42471036 | MS.gene63251:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | - | chr8.4:42471784-42471803 | MS.gene63251:CDS | 50.0% |
| ! | ACTTTTGCCGCGCATGAATC+GGG | - | chr8.4:42471425-42471444 | MS.gene63251:CDS | 50.0% |
| ! | CACTTTTGCCGCGCATGAAT+CGG | - | chr8.4:42471424-42471443 | MS.gene63251:CDS | 50.0% |
| ! | CGCTGATTATGCTGACATGG+AGG | - | chr8.4:42472190-42472209 | MS.gene63251:CDS | 50.0% |
| ! | GGTCTTGCATTTAGGGCATG+TGG | - | chr8.4:42472293-42472312 | MS.gene63251:CDS | 50.0% |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | + | chr8.4:42471375-42471394 | None:intergenic | 50.0% |
| AAACCCTCGCCATGACTCCT+TGG | + | chr8.4:42472344-42472363 | None:intergenic | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | - | chr8.4:42471957-42471976 | MS.gene63251:CDS | 55.0% | |
| AGCGGCTTCGATGAACGGTT+GGG | - | chr8.4:42472271-42472290 | MS.gene63251:CDS | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | + | chr8.4:42472147-42472166 | None:intergenic | 55.0% | |
| ATGAAGATGAACCGCAGCCG+AGG | - | chr8.4:42471112-42471131 | MS.gene63251:CDS | 55.0% | |
| CAAGCTTCTTACGTGCGGTG+AGG | - | chr8.4:42472034-42472053 | MS.gene63251:CDS | 55.0% | |
| CCCCGCTCCGAATTATGTTG+CGG | + | chr8.4:42471524-42471543 | None:intergenic | 55.0% | |
| CCGCAACATAATTCGGAGCG+GGG | - | chr8.4:42471521-42471540 | MS.gene63251:CDS | 55.0% | |
| CCTCGAACAACGGCTTAGAC+AGG | + | chr8.4:42471463-42471482 | None:intergenic | 55.0% | |
| CCTGTCTAAGCCGTTGTTCG+AGG | - | chr8.4:42471460-42471479 | MS.gene63251:CDS | 55.0% | |
| CTCACCGCACGTAAGAAGCT+TGG | + | chr8.4:42472036-42472055 | None:intergenic | 55.0% | |
| CTGTGCTCTCCTTGAATGGG+AGG | - | chr8.4:42471599-42471618 | MS.gene63251:CDS | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+CGG | + | chr8.4:42471126-42471145 | None:intergenic | 55.0% | |
| GAGAGAGCGGCTTCGATGAA+CGG | - | chr8.4:42472266-42472285 | MS.gene63251:CDS | 55.0% | |
| GTTGGAAGGTCGATCCTGCT+TGG | - | chr8.4:42470981-42471000 | MS.gene63251:CDS | 55.0% | |
| TATAGAGCTCGGCCGAGTCA+AGG | + | chr8.4:42471896-42471915 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | + | chr8.4:42471633-42471652 | None:intergenic | 55.0% | |
| TGCCTCTGCCTGACAAGAAC+TGG | + | chr8.4:42471022-42471041 | None:intergenic | 55.0% | |
| TTCATCGAAGCCGCTCTCTC+CGG | + | chr8.4:42472266-42472285 | None:intergenic | 55.0% | |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | - | chr8.4:42472332-42472351 | MS.gene63251:CDS | 55.0% |
| ! | CGCCGCTGATTATGCTGACA+TGG | - | chr8.4:42472187-42472206 | MS.gene63251:CDS | 55.0% |
| ! | CTCCCATTCAAGGAGAGCAC+AGG | + | chr8.4:42471601-42471620 | None:intergenic | 55.0% |
| AGATGAACCGCAGCCGAGGA+AGG | - | chr8.4:42471116-42471135 | MS.gene63251:CDS | 60.0% | |
| CGCAGCCGAGGAAGGTTAAC+AGG | - | chr8.4:42471124-42471143 | MS.gene63251:CDS | 60.0% | |
| CTACGCCCGGGTGACATGTT+AGG | + | chr8.4:42472095-42472114 | None:intergenic | 60.0% | |
| GAGCGGCTTCGATGAACGGT+TGG | - | chr8.4:42472270-42472289 | MS.gene63251:CDS | 60.0% | |
| GAGCTGTCCCGATTCATGCG+CGG | + | chr8.4:42471435-42471454 | None:intergenic | 60.0% | |
| GCGGCTTCGATGAACGGTTG+GGG | - | chr8.4:42472272-42472291 | MS.gene63251:CDS | 60.0% | |
| GGACCAAGGAGTCATGGCGA+GGG | - | chr8.4:42472338-42472357 | MS.gene63251:CDS | 60.0% | |
| GTCGATCCTGCTTGGTTCCG+AGG | - | chr8.4:42470989-42471008 | MS.gene63251:CDS | 60.0% | |
| ! | GCGGAAGCTCTGATTCAGCG+AGG | + | chr8.4:42471505-42471524 | None:intergenic | 60.0% |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | + | chr8.4:42471364-42471383 | None:intergenic | 60.0% |
| CGATCCCCTAGCACTACGCC+CGG | + | chr8.4:42472108-42472127 | None:intergenic | 65.0% | |
| CGGACCAAGGAGTCATGGCG+AGG | - | chr8.4:42472337-42472356 | MS.gene63251:CDS | 65.0% | |
| CGGGCGTAGTGCTAGGGGAT+CGG | - | chr8.4:42472106-42472125 | MS.gene63251:CDS | 65.0% | |
| GATCCCCTAGCACTACGCCC+GGG | + | chr8.4:42472107-42472126 | None:intergenic | 65.0% | |
| GCGGGGAGCTCTATCGTTGG+AGG | - | chr8.4:42471538-42471557 | MS.gene63251:CDS | 65.0% | |
| GGAGCGGGGAGCTCTATCGT+TGG | - | chr8.4:42471535-42471554 | MS.gene63251:CDS | 65.0% | |
| GTCACCCGGGCGTAGTGCTA+GGG | - | chr8.4:42472100-42472119 | MS.gene63251:CDS | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | + | chr8.4:42472141-42472160 | None:intergenic | 65.0% | |
| TCACCCGGGCGTAGTGCTAG+GGG | - | chr8.4:42472101-42472120 | MS.gene63251:CDS | 65.0% | |
| TGTCACCCGGGCGTAGTGCT+AGG | - | chr8.4:42472099-42472118 | MS.gene63251:CDS | 65.0% | |
| GGAGATGCCTGCCACAGCCG+AGG | - | chr8.4:42472127-42472146 | MS.gene63251:CDS | 70.0% | |
| GGTGGTGCCTCGGCTGTGGC+AGG | + | chr8.4:42472137-42472156 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 42470979 | 42472472 | 42470979 | ID=MS.gene63251 |
| chr8.4 | mRNA | 42470979 | 42472472 | 42470979 | ID=MS.gene63251.t1;Parent=MS.gene63251 |
| chr8.4 | exon | 42470979 | 42472472 | 42470979 | ID=MS.gene63251.t1.exon1;Parent=MS.gene63251.t1 |
| chr8.4 | CDS | 42470979 | 42472472 | 42470979 | ID=cds.MS.gene63251.t1;Parent=MS.gene63251.t1 |
| Gene Sequence |
| Protein sequence |
