Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35501.t1 | XP_003594125.1 | 95.9 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 8.50E-167 | 596.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35501.t1 | A2Q224 | 95.9 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 6.1e-167 | 596.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050170 | MS.gene35501 | -0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene35501 | -0.821072 | 4.90E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene35501 | -0.819587 | 1.07E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene35501 | 0.815619 | 8.43E-52 | -1.69E-46 |
| MS.gene051973 | MS.gene35501 | 0.804322 | 2.28E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene35501 | -0.803063 | 4.17E-49 | -1.69E-46 |
| MS.gene052494 | MS.gene35501 | 0.801139 | 1.04E-48 | -1.69E-46 |
| MS.gene052606 | MS.gene35501 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene35501 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene35501 | -0.833766 | 4.42E-56 | -1.69E-46 |
| MS.gene055202 | MS.gene35501 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene35501 | -0.830034 | 3.69E-55 | -1.69E-46 |
| MS.gene056387 | MS.gene35501 | -0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene35501 | -0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene056988 | MS.gene35501 | 0.801539 | 8.58E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene35501 | -0.811762 | 5.95E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene35501 | 0.814132 | 1.80E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene35501 | -0.815749 | 7.88E-52 | -1.69E-46 |
| MS.gene05960 | MS.gene35501 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene35501 | -0.814766 | 1.30E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene35501 | -0.801833 | 7.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35501.t1 | MTR_2g021690 | 95.912 | 318 | 13 | 0 | 1 | 318 | 1 | 318 | 0.0 | 622 |
| MS.gene35501.t1 | MTR_1g112160 | 54.508 | 244 | 104 | 6 | 63 | 301 | 8 | 249 | 1.08e-79 | 243 |
| MS.gene35501.t1 | MTR_1g112150 | 44.257 | 296 | 153 | 3 | 1 | 292 | 1 | 288 | 6.83e-78 | 240 |
| MS.gene35501.t1 | MTR_4g068340 | 35.036 | 274 | 156 | 6 | 1 | 262 | 1 | 264 | 2.98e-43 | 150 |
| MS.gene35501.t1 | MTR_8g071150 | 30.682 | 264 | 160 | 8 | 1 | 251 | 1 | 254 | 2.47e-33 | 124 |
| MS.gene35501.t1 | MTR_5g027180 | 25.641 | 273 | 191 | 5 | 1 | 268 | 1 | 266 | 1.12e-28 | 112 |
| MS.gene35501.t1 | MTR_8g071140 | 30.451 | 266 | 156 | 9 | 14 | 269 | 111 | 357 | 7.60e-26 | 105 |
| MS.gene35501.t1 | MTR_7g034135 | 25.641 | 195 | 134 | 3 | 129 | 312 | 106 | 300 | 1.64e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35501.t1 | AT1G55230 | 59.596 | 297 | 116 | 3 | 1 | 295 | 1 | 295 | 6.76e-124 | 357 |
| MS.gene35501.t1 | AT1G55240 | 57.372 | 312 | 128 | 4 | 1 | 309 | 1 | 310 | 1.03e-118 | 344 |
| MS.gene35501.t1 | AT5G19870 | 57.401 | 277 | 116 | 2 | 1 | 276 | 1 | 276 | 1.78e-105 | 309 |
| MS.gene35501.t1 | AT1G49470 | 32.095 | 296 | 180 | 7 | 1 | 284 | 1 | 287 | 1.10e-37 | 136 |
| MS.gene35501.t1 | AT1G32127 | 30.638 | 235 | 147 | 6 | 1 | 227 | 1 | 227 | 2.38e-30 | 116 |
| MS.gene35501.t1 | AT1G32127 | 30.638 | 235 | 147 | 6 | 1 | 227 | 1 | 227 | 2.38e-30 | 116 |
| MS.gene35501.t1 | AT3G01360 | 23.684 | 190 | 129 | 5 | 120 | 294 | 123 | 311 | 1.21e-11 | 65.1 |
| MS.gene35501.t1 | AT3G01360 | 23.684 | 190 | 129 | 5 | 120 | 294 | 123 | 311 | 1.21e-11 | 65.1 |
Find 64 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTTCAACTACCCTTT+TGG | 0.147614 | 2.4:-65658331 | MS.gene35501:CDS |
| AGGCTTGTGGCTTATGGTTA+TGG | 0.190736 | 2.4:-65658247 | MS.gene35501:CDS |
| CTTTCTTAATACTAGGATTA+TGG | 0.209091 | 2.4:-65658776 | MS.gene35501:CDS |
| CTTATTTGCACCATAATATT+TGG | 0.212658 | 2.4:+65658038 | None:intergenic |
| GTTGGTGAAATGTAGGAATT+TGG | 0.216265 | 2.4:+65658717 | None:intergenic |
| CCCAACATGAATAAAGCTTT+TGG | 0.255141 | 2.4:+65657915 | None:intergenic |
| CAAATATTATGGTGCAAATA+AGG | 0.263519 | 2.4:-65658037 | MS.gene35501:CDS |
| GGCTTGTGGCTTATGGTTAT+GGG | 0.311665 | 2.4:-65658246 | MS.gene35501:CDS |
| AGAAGATGGTATTGTCCTTC+TGG | 0.334093 | 2.4:+65658375 | None:intergenic |
| TGGAAGCTAGGAATTGTGTT+AGG | 0.349655 | 2.4:+65658454 | None:intergenic |
| TCGAAGGGTTGGTGTCGGTC+GGG | 0.358375 | 2.4:+65658603 | None:intergenic |
| TCATATATGGGCACTCTTGT+AGG | 0.360041 | 2.4:-65658819 | None:intergenic |
| CACCCTTTGGCAATTAAACT+TGG | 0.365074 | 2.4:+65658207 | None:intergenic |
| AAGGTTCGGTATTTCTCGTT+GGG | 0.387451 | 2.4:-65658018 | MS.gene35501:CDS |
| AGAATTCATAAAACACCCTT+TGG | 0.389849 | 2.4:+65658194 | None:intergenic |
| TGGTTATGGGGTACATGCTT+TGG | 0.404676 | 2.4:-65658233 | MS.gene35501:CDS |
| TACTACCTTTCCATGTCAAC+AGG | 0.407875 | 2.4:+65657877 | None:intergenic |
| CTGTTGAGGCTAACATGATT+AGG | 0.407916 | 2.4:+65658655 | None:intergenic |
| CCCAAAAGCTTTATTCATGT+TGG | 0.411233 | 2.4:-65657916 | MS.gene35501:CDS |
| ATCGAAGGGTTGGTGTCGGT+CGG | 0.417234 | 2.4:+65658602 | None:intergenic |
| CTCAACAGCTTCAATTTCAA+TGG | 0.417853 | 2.4:-65658640 | MS.gene35501:CDS |
| CCAAAAGCTTTATTCATGTT+GGG | 0.426324 | 2.4:-65657915 | MS.gene35501:CDS |
| GTATTTCTCGTTGGGGATTG+AGG | 0.432650 | 2.4:-65658010 | MS.gene35501:CDS |
| TGATGATGTGGAGTCTCAAA+AGG | 0.433563 | 2.4:-65657956 | MS.gene35501:CDS |
| CGAAGGGTTGGTGTCGGTCG+GGG | 0.438020 | 2.4:+65658604 | None:intergenic |
| TCTCAAAAGGGAAGCTTAGT+TGG | 0.445309 | 2.4:-65657943 | MS.gene35501:CDS |
| CGAACACGCTTTGATCTCCA+TGG | 0.460449 | 2.4:-65658541 | MS.gene35501:CDS |
| CTTGTAGGACATGTAGCTCC+TGG | 0.486072 | 2.4:-65658804 | MS.gene35501:CDS |
| GATTGTTCCGTCTGTATCGA+AGG | 0.490701 | 2.4:+65658587 | None:intergenic |
| TTTGTCAAGGATTATGGAGG+AGG | 0.503244 | 2.4:+65658500 | None:intergenic |
| CAAGAACTTGCAAGAGAAGA+TGG | 0.509784 | 2.4:+65658361 | None:intergenic |
| TAAGGTTCGGTATTTCTCGT+TGG | 0.511002 | 2.4:-65658019 | MS.gene35501:CDS |
| TTTGCATGGGAATTCCCAAA+AGG | 0.511782 | 2.4:+65658316 | None:intergenic |
| GGAGTTTGATGTGGTTGAAA+AGG | 0.511822 | 2.4:+65658751 | None:intergenic |
| TCAAAGCGTGTTCGAAGTTG+TGG | 0.514973 | 2.4:+65658550 | None:intergenic |
| TTCCGTCTGTATCGAAGGGT+TGG | 0.515452 | 2.4:+65658592 | None:intergenic |
| GATTATGGAGGAGGCGGCGT+AGG | 0.527863 | 2.4:+65658509 | None:intergenic |
| ATTATGGTGCAAATAAGGTT+CGG | 0.528988 | 2.4:-65658032 | MS.gene35501:CDS |
| CATTGAAATTGAAGCTGTTG+AGG | 0.531529 | 2.4:+65658641 | None:intergenic |
| GGAAGCTAGGAATTGTGTTA+GGG | 0.534932 | 2.4:+65658455 | None:intergenic |
| GTCAAGGATTATGGAGGAGG+CGG | 0.536473 | 2.4:+65658503 | None:intergenic |
| CACCAAGTTTAATTGCCAAA+GGG | 0.536544 | 2.4:-65658209 | MS.gene35501:CDS |
| TGTGATCAGCTGAATGAAGA+TGG | 0.541577 | 2.4:+65658403 | None:intergenic |
| TCTTCATTCAGCTGATCACA+TGG | 0.543097 | 2.4:-65658400 | MS.gene35501:CDS |
| ACATGATTAGGTAAAGTTCA+AGG | 0.554269 | 2.4:+65658667 | None:intergenic |
| TTTCACCTGTTGACATGGAA+AGG | 0.555677 | 2.4:-65657882 | MS.gene35501:CDS |
| TTGCATGGGAATTCCCAAAA+GGG | 0.566598 | 2.4:+65658317 | None:intergenic |
| ACACCAAGTTTAATTGCCAA+AGG | 0.571150 | 2.4:-65658210 | MS.gene35501:CDS |
| GCTTGTGGCTTATGGTTATG+GGG | 0.571244 | 2.4:-65658245 | MS.gene35501:CDS |
| AGGTTCGGTATTTCTCGTTG+GGG | 0.581131 | 2.4:-65658017 | MS.gene35501:CDS |
| ATTGTTCCGTCTGTATCGAA+GGG | 0.588747 | 2.4:+65658588 | None:intergenic |
| CTGTATCGAAGGGTTGGTGT+CGG | 0.591425 | 2.4:+65658598 | None:intergenic |
| GAACCATGTTGGTGAAATGT+AGG | 0.593760 | 2.4:+65658710 | None:intergenic |
| ATTCCTACATTTCACCAACA+TGG | 0.602217 | 2.4:-65658713 | MS.gene35501:CDS |
| GCTGATCACATGGGACCAGA+AGG | 0.605989 | 2.4:-65658390 | MS.gene35501:CDS |
| GATGATGTGGAGTCTCAAAA+GGG | 0.613869 | 2.4:-65657955 | MS.gene35501:CDS |
| CACCAACCCTTCGATACAGA+CGG | 0.637019 | 2.4:-65658594 | MS.gene35501:CDS |
| TTTGATGTTGAGAACCATGT+TGG | 0.643972 | 2.4:+65658699 | None:intergenic |
| AAGTTGTGGAGATGATACGA+GGG | 0.657098 | 2.4:+65658564 | None:intergenic |
| AGTATTAAGAAAGCAAAACC+AGG | 0.657206 | 2.4:+65658786 | None:intergenic |
| GAAGTTGTGGAGATGATACG+AGG | 0.663722 | 2.4:+65658563 | None:intergenic |
| CTTCATTCAGCTGATCACAT+GGG | 0.667757 | 2.4:-65658399 | MS.gene35501:CDS |
| GGCGTAGGTGAAGAAAGCCA+TGG | 0.698512 | 2.4:+65658524 | None:intergenic |
| AGTTGTGGAGATGATACGAG+GGG | 0.713913 | 2.4:+65658565 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTAAGTATATTTTTTCA+AGG | - | chr2.4:65658425-65658444 | MS.gene35501:CDS | 15.0% |
| !!! | AGGAATTTGGATTTTTAATA+TGG | + | chr2.4:65657965-65657984 | None:intergenic | 20.0% |
| !!! | TAATATTTTGTTTAGTTGCT+TGG | - | chr2.4:65658586-65658605 | MS.gene35501:CDS | 20.0% |
| ! | ATACAAAGAAACACCAAAAA+CGG | + | chr2.4:65658624-65658643 | None:intergenic | 25.0% |
| ! | CAAATATTATGGTGCAAATA+AGG | - | chr2.4:65658655-65658674 | MS.gene35501:CDS | 25.0% |
| ! | CTTATTTGCACCATAATATT+TGG | + | chr2.4:65658657-65658676 | None:intergenic | 25.0% |
| ! | CTTTCTTAATACTAGGATTA+TGG | - | chr2.4:65657916-65657935 | MS.gene35501:CDS | 25.0% |
| !! | ATTTCAATGGAACTTTTCAT+CGG | - | chr2.4:65658065-65658084 | MS.gene35501:CDS | 25.0% |
| !! | TGAAAAATTAAGTGATGATG+TGG | - | chr2.4:65658724-65658743 | MS.gene35501:CDS | 25.0% |
| !! | TTTTAATATGGAGTTTGATG+TGG | + | chr2.4:65657953-65657972 | None:intergenic | 25.0% |
| !!! | TGTTTTATGAATTCTGAAGA+AGG | - | chr2.4:65658506-65658525 | MS.gene35501:CDS | 25.0% |
| !!! | TTGGTTTTGACCAAATATTA+TGG | - | chr2.4:65658644-65658663 | MS.gene35501:CDS | 25.0% |
| !!! | TTTTGGTGTTTCTTTGTATT+TGG | - | chr2.4:65658625-65658644 | MS.gene35501:CDS | 25.0% |
| AAGCTGTTGAAAAAAAGCTA+TGG | + | chr2.4:65658261-65658280 | None:intergenic | 30.0% | |
| ACATGATTAGGTAAAGTTCA+AGG | + | chr2.4:65658028-65658047 | None:intergenic | 30.0% | |
| AGAATTCATAAAACACCCTT+TGG | + | chr2.4:65658501-65658520 | None:intergenic | 30.0% | |
| AGTATTAAGAAAGCAAAACC+AGG | + | chr2.4:65657909-65657928 | None:intergenic | 30.0% | |
| ATTATGGTGCAAATAAGGTT+CGG | - | chr2.4:65658660-65658679 | MS.gene35501:CDS | 30.0% | |
| ! | CCAACATGAATAAAGCTTTT+GGG | + | chr2.4:65658779-65658798 | None:intergenic | 30.0% |
| ! | GGTTTTGCTTTCTTAATACT+AGG | - | chr2.4:65657909-65657928 | MS.gene35501:CDS | 30.0% |
| ! | TTCGATTTTGTCAAGGATTA+TGG | + | chr2.4:65658201-65658220 | None:intergenic | 30.0% |
| !! | CCAAAAGCTTTATTCATGTT+GGG | - | chr2.4:65658777-65658796 | MS.gene35501:CDS | 30.0% |
| !!! | GTATATTTTTTCAAGGCTTG+TGG | - | chr2.4:65658432-65658451 | MS.gene35501:CDS | 30.0% |
| ACACCAAGTTTAATTGCCAA+AGG | - | chr2.4:65658482-65658501 | MS.gene35501:CDS | 35.0% | |
| ATTCCTACATTTCACCAACA+TGG | - | chr2.4:65657979-65657998 | MS.gene35501:CDS | 35.0% | |
| CACCAAGTTTAATTGCCAAA+GGG | - | chr2.4:65658483-65658502 | MS.gene35501:CDS | 35.0% | |
| CATTGAAATTGAAGCTGTTG+AGG | + | chr2.4:65658054-65658073 | None:intergenic | 35.0% | |
| CTCAACAGCTTCAATTTCAA+TGG | - | chr2.4:65658052-65658071 | MS.gene35501:CDS | 35.0% | |
| GAAAAAAAGCTATGGAAGCT+AGG | + | chr2.4:65658253-65658272 | None:intergenic | 35.0% | |
| TTTGATGTTGAGAACCATGT+TGG | + | chr2.4:65657996-65658015 | None:intergenic | 35.0% | |
| ! | CCCAACATGAATAAAGCTTT+TGG | + | chr2.4:65658780-65658799 | None:intergenic | 35.0% |
| ! | GATTTTGTCAAGGATTATGG+AGG | + | chr2.4:65658198-65658217 | None:intergenic | 35.0% |
| ! | GTTGGTGAAATGTAGGAATT+TGG | + | chr2.4:65657978-65657997 | None:intergenic | 35.0% |
| ! | TCTCTTTCAACTACCCTTTT+GGG | - | chr2.4:65658362-65658381 | MS.gene35501:CDS | 35.0% |
| !! | CCCAAAAGCTTTATTCATGT+TGG | - | chr2.4:65658776-65658795 | MS.gene35501:CDS | 35.0% |
| !! | CTTGGTTTTCGATTTTGTCA+AGG | + | chr2.4:65658208-65658227 | None:intergenic | 35.0% |
| !!! | AACCAAGAAGCTTTTTTGCA+TGG | + | chr2.4:65658393-65658412 | None:intergenic | 35.0% |
| !!! | ACCAAGAAGCTTTTTTGCAT+GGG | + | chr2.4:65658392-65658411 | None:intergenic | 35.0% |
| !!! | GTTATTGTTGTTGCCGTTTT+TGG | - | chr2.4:65658608-65658627 | MS.gene35501:CDS | 35.0% |
| AAGTTGTGGAGATGATACGA+GGG | + | chr2.4:65658131-65658150 | None:intergenic | 40.0% | |
| AGAAGATGGTATTGTCCTTC+TGG | + | chr2.4:65658320-65658339 | None:intergenic | 40.0% | |
| ATTGTTCCGTCTGTATCGAA+GGG | + | chr2.4:65658107-65658126 | None:intergenic | 40.0% | |
| CAAGAACTTGCAAGAGAAGA+TGG | + | chr2.4:65658334-65658353 | None:intergenic | 40.0% | |
| CACCCTTTGGCAATTAAACT+TGG | + | chr2.4:65658488-65658507 | None:intergenic | 40.0% | |
| CTGTTGAGGCTAACATGATT+AGG | + | chr2.4:65658040-65658059 | None:intergenic | 40.0% | |
| CTTCATTCAGCTGATCACAT+GGG | - | chr2.4:65658293-65658312 | MS.gene35501:CDS | 40.0% | |
| GATGATGTGGAGTCTCAAAA+GGG | - | chr2.4:65658737-65658756 | MS.gene35501:CDS | 40.0% | |
| GGAAGCTAGGAATTGTGTTA+GGG | + | chr2.4:65658240-65658259 | None:intergenic | 40.0% | |
| GGAGTTTGATGTGGTTGAAA+AGG | + | chr2.4:65657944-65657963 | None:intergenic | 40.0% | |
| TCCCATGCAAAAAAGCTTCT+TGG | - | chr2.4:65658388-65658407 | MS.gene35501:CDS | 40.0% | |
| TCTCAAAAGGGAAGCTTAGT+TGG | - | chr2.4:65658749-65658768 | MS.gene35501:CDS | 40.0% | |
| TCTTCATTCAGCTGATCACA+TGG | - | chr2.4:65658292-65658311 | MS.gene35501:CDS | 40.0% | |
| TGGAAGCTAGGAATTGTGTT+AGG | + | chr2.4:65658241-65658260 | None:intergenic | 40.0% | |
| TGTGATCAGCTGAATGAAGA+TGG | + | chr2.4:65658292-65658311 | None:intergenic | 40.0% | |
| TTGCATGGGAATTCCCAAAA+GGG | + | chr2.4:65658378-65658397 | None:intergenic | 40.0% | |
| TTTCACCTGTTGACATGGAA+AGG | - | chr2.4:65658810-65658829 | MS.gene35501:CDS | 40.0% | |
| TTTGCATGGGAATTCCCAAA+AGG | + | chr2.4:65658379-65658398 | None:intergenic | 40.0% | |
| TTTGTCAAGGATTATGGAGG+AGG | + | chr2.4:65658195-65658214 | None:intergenic | 40.0% | |
| ! | AACGTTTTCACCTGTTGACA+TGG | - | chr2.4:65658805-65658824 | MS.gene35501:CDS | 40.0% |
| ! | AAGGTTCGGTATTTCTCGTT+GGG | - | chr2.4:65658674-65658693 | MS.gene35501:CDS | 40.0% |
| ! | CTCTCTTTCAACTACCCTTT+TGG | - | chr2.4:65658361-65658380 | MS.gene35501:CDS | 40.0% |
| ! | GAACCATGTTGGTGAAATGT+AGG | + | chr2.4:65657985-65658004 | None:intergenic | 40.0% |
| ! | TAAGGTTCGGTATTTCTCGT+TGG | - | chr2.4:65658673-65658692 | MS.gene35501:CDS | 40.0% |
| ! | TGATGATGTGGAGTCTCAAA+AGG | - | chr2.4:65658736-65658755 | MS.gene35501:CDS | 40.0% |
| !! | TTTTCAAGGCTTGTGGCTTA+TGG | - | chr2.4:65658439-65658458 | MS.gene35501:CDS | 40.0% |
| AGGCTTGTGGCTTATGGTTA+TGG | - | chr2.4:65658445-65658464 | MS.gene35501:CDS | 45.0% | |
| AGTTGTGGAGATGATACGAG+GGG | + | chr2.4:65658130-65658149 | None:intergenic | 45.0% | |
| GAAGTTGTGGAGATGATACG+AGG | + | chr2.4:65658132-65658151 | None:intergenic | 45.0% | |
| GATTGTTCCGTCTGTATCGA+AGG | + | chr2.4:65658108-65658127 | None:intergenic | 45.0% | |
| GCTTGTGGCTTATGGTTATG+GGG | - | chr2.4:65658447-65658466 | MS.gene35501:CDS | 45.0% | |
| GGCTTGTGGCTTATGGTTAT+GGG | - | chr2.4:65658446-65658465 | MS.gene35501:CDS | 45.0% | |
| GTATTTCTCGTTGGGGATTG+AGG | - | chr2.4:65658682-65658701 | MS.gene35501:CDS | 45.0% | |
| TCAAAGCGTGTTCGAAGTTG+TGG | + | chr2.4:65658145-65658164 | None:intergenic | 45.0% | |
| TGGTTATGGGGTACATGCTT+TGG | - | chr2.4:65658459-65658478 | MS.gene35501:CDS | 45.0% | |
| ! | AGGTTCGGTATTTCTCGTTG+GGG | - | chr2.4:65658675-65658694 | MS.gene35501:CDS | 45.0% |
| ! | GTGTTAGGGCAAGTTTTGCT+TGG | + | chr2.4:65658226-65658245 | None:intergenic | 45.0% |
| CACCAACCCTTCGATACAGA+CGG | - | chr2.4:65658098-65658117 | MS.gene35501:CDS | 50.0% | |
| CGAACACGCTTTGATCTCCA+TGG | - | chr2.4:65658151-65658170 | MS.gene35501:CDS | 50.0% | |
| CTTGTAGGACATGTAGCTCC+TGG | - | chr2.4:65657888-65657907 | MS.gene35501:CDS | 50.0% | |
| GTCAAGGATTATGGAGGAGG+CGG | + | chr2.4:65658192-65658211 | None:intergenic | 50.0% | |
| TTCCGTCTGTATCGAAGGGT+TGG | + | chr2.4:65658103-65658122 | None:intergenic | 50.0% | |
| !! | CTGTATCGAAGGGTTGGTGT+CGG | + | chr2.4:65658097-65658116 | None:intergenic | 50.0% |
| GCTGATCACATGGGACCAGA+AGG | - | chr2.4:65658302-65658321 | MS.gene35501:CDS | 55.0% | |
| GGCGTAGGTGAAGAAAGCCA+TGG | + | chr2.4:65658171-65658190 | None:intergenic | 55.0% | |
| !! | ATCGAAGGGTTGGTGTCGGT+CGG | + | chr2.4:65658093-65658112 | None:intergenic | 55.0% |
| GATTATGGAGGAGGCGGCGT+AGG | + | chr2.4:65658186-65658205 | None:intergenic | 60.0% | |
| !! | TCGAAGGGTTGGTGTCGGTC+GGG | + | chr2.4:65658092-65658111 | None:intergenic | 60.0% |
| !! | CGAAGGGTTGGTGTCGGTCG+GGG | + | chr2.4:65658091-65658110 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 65657879 | 65658835 | 65657879 | ID=MS.gene35501 |
| chr2.4 | mRNA | 65657879 | 65658835 | 65657879 | ID=MS.gene35501.t1;Parent=MS.gene35501 |
| chr2.4 | exon | 65657879 | 65658835 | 65657879 | ID=MS.gene35501.t1.exon1;Parent=MS.gene35501.t1 |
| chr2.4 | CDS | 65657879 | 65658835 | 65657879 | ID=cds.MS.gene35501.t1;Parent=MS.gene35501.t1 |
| Gene Sequence |
| Protein sequence |
