AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36377


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36377.t1 MTR_2g100620 97.458 354 9 0 1 354 1 354 0.0 709
MS.gene36377.t1 MTR_8g014910 76.771 353 82 0 1 353 2 354 0.0 572
MS.gene36377.t1 MTR_2g084585 59.884 344 137 1 10 353 9 351 2.47e-151 430
MS.gene36377.t1 MTR_4g056280 53.353 343 159 1 11 353 10 351 2.17e-132 382
MS.gene36377.t1 MTR_4g056160 53.354 328 151 2 28 353 24 351 1.29e-122 357
MS.gene36377.t1 MTR_5g084750 45.912 318 171 1 29 346 28 344 1.40e-100 301
MS.gene36377.t1 MTR_3g082830 45.511 323 175 1 29 351 36 357 8.47e-100 299
MS.gene36377.t1 MTR_5g084790 43.750 320 179 1 29 348 30 348 5.27e-98 295
MS.gene36377.t1 MTR_1g025780 42.571 350 196 4 1 348 9 355 1.43e-95 288
MS.gene36377.t1 MTR_3g464730 42.493 353 193 5 1 350 2 347 3.17e-95 287
MS.gene36377.t1 MTR_5g084770 41.194 335 191 3 23 354 20 351 1.57e-93 283
MS.gene36377.t1 MTR_5g074270 44.762 315 169 4 31 342 33 345 2.00e-90 276
MS.gene36377.t1 MTR_5g022630 41.210 347 198 4 9 350 18 363 1.26e-88 271
MS.gene36377.t1 MTR_8g075230 41.104 326 191 1 25 350 30 354 7.37e-87 266
MS.gene36377.t1 MTR_1g025760 38.596 342 205 4 9 348 58 396 9.45e-86 265
MS.gene36377.t1 MTR_2g015080 38.663 344 199 6 4 337 11 352 2.29e-84 260
MS.gene36377.t1 MTR_4g087985 39.577 331 183 5 31 346 36 364 5.62e-84 259
MS.gene36377.t1 MTR_1g025700 38.953 344 208 2 5 348 24 365 6.25e-84 259
MS.gene36377.t1 MTR_8g075200 39.564 321 193 1 30 350 40 359 7.58e-84 260
MS.gene36377.t1 MTR_1108s0010 53.846 221 90 2 133 353 2 210 7.50e-83 251
MS.gene36377.t1 MTR_5g022640 38.150 346 209 3 9 350 18 362 9.55e-83 256
MS.gene36377.t1 MTR_8g075220 38.838 327 194 3 30 351 39 364 2.81e-82 254
MS.gene36377.t1 MTR_1g025720 40.317 315 182 4 30 342 36 346 1.64e-81 253
MS.gene36377.t1 MTR_3g114090 39.441 322 192 3 30 350 35 354 3.68e-81 251
MS.gene36377.t1 MTR_3g114120 39.938 323 192 2 26 348 42 362 1.59e-80 250
MS.gene36377.t1 MTR_1g025680 39.506 324 193 3 29 351 32 353 5.96e-80 251
MS.gene36377.t1 MTR_1g025910 39.744 312 182 5 36 345 41 348 3.73e-71 226
MS.gene36377.t1 MTR_1g069175 39.809 314 176 6 31 337 33 340 1.53e-70 224
MS.gene36377.t1 MTR_5g083040 36.637 333 193 6 29 350 30 355 4.09e-69 221
MS.gene36377.t1 MTR_6g021530 35.965 342 210 8 10 346 7 344 1.66e-64 209
MS.gene36377.t1 MTR_7g116570 35.976 328 201 7 23 346 26 348 4.91e-64 208
MS.gene36377.t1 MTR_7g116500 35.542 332 196 9 26 346 23 347 5.92e-64 207
MS.gene36377.t1 MTR_7g116510 35.043 351 214 7 1 347 1 341 6.68e-64 207
MS.gene36377.t1 MTR_0565s0010 36.207 348 207 10 1 342 4 342 1.09e-63 207
MS.gene36377.t1 MTR_8g079050 35.202 321 198 6 35 347 41 359 2.13e-63 206
MS.gene36377.t1 MTR_7g116520 36.250 320 195 7 31 346 34 348 3.57e-63 206
MS.gene36377.t1 MTR_1g079540 36.164 318 196 6 31 345 31 344 3.77e-63 206
MS.gene36377.t1 MTR_8g087890 36.657 341 200 8 9 342 9 340 8.78e-63 204
MS.gene36377.t1 MTR_1g024890 36.012 336 203 8 15 346 19 346 2.99e-62 203
MS.gene36377.t1 MTR_4g019880 34.473 351 216 10 2 346 6 348 8.76e-61 199
MS.gene36377.t1 MTR_1g079530 36.585 328 191 8 31 353 29 344 1.07e-60 199
MS.gene36377.t1 MTR_2g033920 34.675 323 203 6 29 347 33 351 1.37e-60 199
MS.gene36377.t1 MTR_3g024510 35.000 340 207 9 10 342 15 347 4.80e-59 195
MS.gene36377.t1 MTR_4g122200 34.091 352 205 9 9 349 18 353 1.00e-58 194
MS.gene36377.t1 MTR_3g052490 34.473 351 210 11 5 345 7 347 3.05e-57 190
MS.gene36377.t1 MTR_5g009100 32.692 312 203 6 34 342 49 356 5.60e-57 190
MS.gene36377.t1 MTR_4g036375 54.491 167 76 0 12 178 11 177 3.04e-56 182
MS.gene36377.t1 MTR_7g008060 33.333 345 203 9 9 346 10 334 6.14e-56 186
MS.gene36377.t1 MTR_3g052580 33.239 352 215 11 3 345 2 342 5.35e-55 185
MS.gene36377.t1 MTR_3g052580 33.239 352 215 11 3 345 1 341 1.12e-54 184
MS.gene36377.t1 MTR_3g005650 33.828 337 206 9 10 342 12 335 2.18e-54 182
MS.gene36377.t1 MTR_5g093090 31.909 351 210 10 10 347 11 345 2.28e-54 182
MS.gene36377.t1 MTR_5g078210 35.032 314 191 8 35 343 29 334 3.73e-54 182
MS.gene36377.t1 MTR_2g044100 34.545 330 205 6 31 354 43 367 5.11e-53 180
MS.gene36377.t1 MTR_8g074570 31.339 351 230 4 9 353 16 361 7.26e-53 179
MS.gene36377.t1 MTR_3g005660 34.154 325 198 9 29 344 34 351 3.59e-52 177
MS.gene36377.t1 MTR_3g052480 33.239 352 214 12 5 345 8 349 4.27e-52 177
MS.gene36377.t1 MTR_2g033930 31.250 320 214 5 30 347 31 346 2.26e-50 172
MS.gene36377.t1 MTR_8g031420 30.791 354 224 10 9 354 13 353 2.36e-49 169
MS.gene36377.t1 MTR_4g108690 34.169 319 199 9 35 348 31 343 5.70e-49 169
MS.gene36377.t1 MTR_3g435540 34.483 319 198 9 35 348 27 339 1.59e-48 167
MS.gene36377.t1 MTR_3g098270 32.390 318 205 6 31 342 34 347 2.40e-48 167
MS.gene36377.t1 MTR_8g022810 30.372 349 230 8 1 342 10 352 3.53e-48 167
MS.gene36377.t1 MTR_4g035353 31.348 319 208 8 29 342 29 341 5.28e-48 166
MS.gene36377.t1 MTR_2g017875 33.746 323 192 10 27 342 30 337 1.05e-47 165
MS.gene36377.t1 MTR_8g031430 31.755 359 209 13 7 345 4 346 3.98e-47 164
MS.gene36377.t1 MTR_6g049230 58.537 123 50 1 205 327 73 194 1.12e-46 157
MS.gene36377.t1 MTR_8g022790 31.861 317 197 8 31 342 37 339 1.67e-46 162
MS.gene36377.t1 MTR_8g031390 30.214 374 219 13 3 354 1 354 1.74e-46 162
MS.gene36377.t1 MTR_8g074580 28.861 395 223 8 9 353 22 408 4.01e-46 162
MS.gene36377.t1 MTR_2g033920 35.338 266 165 5 29 290 33 295 4.63e-46 159
MS.gene36377.t1 MTR_8g087870 33.856 319 191 9 29 343 27 329 2.01e-45 159
MS.gene36377.t1 MTR_0009s0250 34.125 337 195 14 22 350 24 341 9.61e-45 157
MS.gene36377.t1 MTR_1g030268 33.918 342 186 12 30 345 39 366 1.87e-44 157
MS.gene36377.t1 MTR_3g021460 31.549 355 204 12 3 343 1 330 2.23e-43 153
MS.gene36377.t1 MTR_8g074560 31.700 347 216 13 12 345 11 349 2.61e-43 154
MS.gene36377.t1 MTR_4g036385 55.645 124 54 1 230 353 13 135 6.67e-43 145
MS.gene36377.t1 MTR_2g017925 33.542 319 190 11 29 342 31 332 7.15e-43 152
MS.gene36377.t1 MTR_8g031400 29.341 334 211 10 31 354 37 355 1.13e-42 152
MS.gene36377.t1 MTR_4g056220 53.488 129 59 1 225 353 61 188 1.66e-42 146
MS.gene36377.t1 MTR_2g017965 31.897 348 204 14 10 342 8 337 2.68e-42 151
MS.gene36377.t1 MTR_3g023220 32.704 318 192 10 29 342 31 330 3.32e-42 150
MS.gene36377.t1 MTR_2g017955 32.024 331 205 10 29 353 31 347 1.75e-41 149
MS.gene36377.t1 MTR_1g030275 32.571 350 196 12 23 346 31 366 1.04e-40 147
MS.gene36377.t1 MTR_5g093090 32.526 289 178 8 10 290 11 290 5.60e-40 143
MS.gene36377.t1 MTR_5g078210 34.100 261 162 7 35 290 29 284 3.27e-39 142
MS.gene36377.t1 MTR_8g031390 31.034 319 181 12 3 302 1 299 3.99e-39 141
MS.gene36377.t1 MTR_2g461580 30.675 326 195 10 27 343 27 330 2.13e-38 140
MS.gene36377.t1 MTR_1g030220 31.751 337 192 11 31 341 40 364 2.23e-38 141
MS.gene36377.t1 MTR_2g017915 31.579 323 184 9 29 347 31 320 6.55e-38 139
MS.gene36377.t1 MTR_5g074210 46.853 143 73 3 204 345 64 204 7.74e-38 135
MS.gene36377.t1 MTR_1g079590 41.573 178 98 4 31 204 31 206 1.78e-37 134
MS.gene36377.t1 MTR_7g087190 30.286 350 206 11 30 351 42 381 3.59e-37 138
MS.gene36377.t1 MTR_1g030230 30.409 342 200 12 30 345 31 360 2.88e-36 135
MS.gene36377.t1 MTR_5g087690 28.986 345 194 13 22 344 41 356 4.06e-36 135
MS.gene36377.t1 MTR_6g049220 39.665 179 63 1 26 204 25 158 9.10e-35 125
MS.gene36377.t1 MTR_2g015580 29.032 341 203 11 31 346 47 373 3.94e-34 130
MS.gene36377.t1 MTR_1g030340 31.044 364 211 14 9 345 21 371 1.02e-33 129
MS.gene36377.t1 MTR_8g089805 28.612 353 197 12 30 346 39 372 5.12e-33 127
MS.gene36377.t1 MTR_8g022810 27.273 352 190 10 1 345 10 302 1.88e-32 124
MS.gene36377.t1 MTR_1g030268 34.767 279 150 11 30 290 39 303 2.82e-32 123
MS.gene36377.t1 MTR_3g463960 27.811 338 214 10 31 347 44 372 7.83e-32 123
MS.gene36377.t1 MTR_3g463950 27.811 338 214 10 31 347 44 372 7.83e-32 123
MS.gene36377.t1 MTR_3g463970 27.811 338 214 10 31 347 44 372 7.83e-32 123
MS.gene36377.t1 MTR_3g463940 27.811 338 214 10 31 347 44 372 7.83e-32 123
MS.gene36377.t1 MTR_2g043980 31.551 374 192 18 3 347 7 345 1.19e-31 122
MS.gene36377.t1 MTR_7g033150 26.891 357 208 13 31 351 35 374 2.46e-31 122
MS.gene36377.t1 MTR_3g463930 28.084 381 223 15 9 347 8 379 4.11e-31 121
MS.gene36377.t1 MTR_7g033165 30.636 346 197 13 30 346 32 363 4.44e-31 121
MS.gene36377.t1 MTR_8g028160 28.367 349 210 12 31 351 36 372 1.17e-30 120
MS.gene36377.t1 MTR_7g113860 29.825 342 205 14 30 346 28 359 5.84e-30 118
MS.gene36377.t1 MTR_7g111780 28.739 341 204 14 30 351 34 354 1.72e-29 116
MS.gene36377.t1 MTR_1g030265 30.877 285 164 9 89 345 54 333 3.20e-29 115
MS.gene36377.t1 MTR_2g015630 28.070 342 199 13 36 347 36 360 4.91e-29 115
MS.gene36377.t1 MTR_2g079090 28.657 335 200 13 31 347 30 343 6.92e-29 115
MS.gene36377.t1 MTR_2g015590 28.804 368 218 14 6 347 10 359 1.20e-28 114
MS.gene36377.t1 MTR_0029s0050 27.747 364 223 14 3 347 1 343 1.63e-28 114
MS.gene36377.t1 MTR_7g033155 26.301 365 211 12 31 351 38 388 2.36e-28 114
MS.gene36377.t1 MTR_7g113860 29.032 341 209 13 30 346 34 365 2.51e-28 114
MS.gene36377.t1 MTR_6g007100 27.616 344 217 12 23 351 25 351 4.51e-28 112
MS.gene36377.t1 MTR_0127s0040 30.909 220 140 7 129 342 4 217 5.67e-28 109
MS.gene36377.t1 MTR_2g018015 37.037 189 113 5 29 213 34 220 7.00e-28 111
MS.gene36377.t1 MTR_7g116870 25.815 368 239 10 2 346 4 360 7.73e-28 112
MS.gene36377.t1 MTR_3g069780 28.065 367 232 14 1 347 1 355 9.05e-28 112
MS.gene36377.t1 MTR_5g093090 36.842 190 106 7 10 191 11 194 1.36e-27 108
MS.gene36377.t1 MTR_0029s0100 27.747 364 223 14 3 347 1 343 1.38e-27 111
MS.gene36377.t1 MTR_2g079080 28.060 335 202 13 31 347 30 343 1.74e-27 111
MS.gene36377.t1 MTR_1g082390 27.714 350 211 12 30 351 30 365 3.03e-27 110
MS.gene36377.t1 MTR_6g007095 28.080 349 210 12 28 351 38 370 3.16e-27 113
MS.gene36377.t1 MTR_6g007095 28.274 336 206 13 34 351 368 686 2.32e-25 107
MS.gene36377.t1 MTR_3g438030 27.397 365 235 13 3 347 1 355 2.89e-26 108
MS.gene36377.t1 MTR_2g087292 28.875 329 140 10 29 350 31 272 4.68e-26 105
MS.gene36377.t1 MTR_6g007090 27.988 343 204 14 30 346 38 363 5.47e-25 104
MS.gene36377.t1 MTR_3g448360 26.158 367 237 12 3 347 1 355 1.48e-23 100
MS.gene36377.t1 MTR_4g104240 24.854 342 211 10 32 347 40 361 5.02e-23 99.0
MS.gene36377.t1 MTR_2g015650 29.446 343 211 14 31 352 31 363 6.30e-23 98.6
MS.gene36377.t1 MTR_8g089805 26.370 292 165 9 91 346 27 304 6.71e-23 97.8
MS.gene36377.t1 MTR_7g111780 27.407 270 161 8 101 351 2 255 1.10e-21 93.6
MS.gene36377.t1 MTR_3g069520 25.737 373 229 13 3 347 1 353 1.80e-21 94.7
MS.gene36377.t1 MTR_8g038680 25.356 351 222 12 28 351 25 362 6.75e-21 92.8
MS.gene36377.t1 MTR_7g104220 26.453 344 223 13 11 345 22 344 3.98e-20 90.5
MS.gene36377.t1 MTR_7g113860 28.464 267 163 9 104 346 29 291 4.36e-20 89.7
MS.gene36377.t1 MTR_2g015670 26.686 341 209 12 31 352 31 349 1.31e-19 89.0
MS.gene36377.t1 MTR_5g084880 39.423 104 63 0 187 290 9 112 2.33e-19 84.0
MS.gene36377.t1 MTR_1g060500 28.012 332 208 12 32 350 41 354 3.30e-19 87.8
MS.gene36377.t1 MTR_7g033165 30.035 283 162 12 30 290 32 300 1.20e-18 85.9
MS.gene36377.t1 MTR_8g062580 38.596 114 68 2 229 342 66 177 1.30e-18 84.3
MS.gene36377.t1 MTR_2g017925 29.680 219 136 8 128 342 25 229 1.45e-18 84.7
MS.gene36377.t1 MTR_1g092760 26.752 314 197 14 32 335 40 330 1.86e-18 85.9
MS.gene36377.t1 MTR_1g092750 25.153 326 214 13 25 341 34 338 2.72e-18 85.1
MS.gene36377.t1 MTR_1g060490 25.298 336 210 12 32 353 38 346 1.73e-17 82.8
MS.gene36377.t1 MTR_2g043990 28.296 311 157 14 3 289 69 337 1.53e-16 80.1
MS.gene36377.t1 MTR_2g015590 26.948 308 184 12 6 290 10 299 3.06e-16 79.3
MS.gene36377.t1 MTR_1g092690 24.465 327 205 12 23 335 43 341 5.32e-16 78.6
MS.gene36377.t1 MTR_4g056290 54.237 59 26 1 293 351 47 104 4.89e-15 71.2
MS.gene36377.t1 MTR_6g034400 32.258 124 84 0 81 204 1 124 1.69e-14 70.1
MS.gene36377.t1 MTR_8g012540 23.871 310 204 8 12 301 9 306 9.63e-14 71.6
MS.gene36377.t1 MTR_5g062890 61.111 54 20 1 28 80 25 78 2.80e-13 65.5
MS.gene36377.t1 MTR_1g092740 25.316 316 199 13 32 335 39 329 4.05e-13 70.1
MS.gene36377.t1 MTR_5g093550 56.897 58 23 2 288 345 77 132 8.16e-13 65.9
MS.gene36377.t1 MTR_2g017895 22.305 269 174 8 79 342 5 243 1.73e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36377.t1 AT3G16370 77.370 327 74 0 28 354 27 353 0.0 530
MS.gene36377.t1 AT5G22810 59.429 350 136 3 9 353 10 358 3.93e-151 430
MS.gene36377.t1 AT5G03810 58.592 355 142 4 1 353 1 352 3.24e-149 425
MS.gene36377.t1 AT5G03820 58.989 356 140 4 1 353 4 356 7.93e-149 424
MS.gene36377.t1 AT5G03820 59.218 358 136 5 1 353 32 384 4.11e-148 423
MS.gene36377.t1 AT3G53100 53.374 326 151 1 28 353 26 350 5.05e-134 386
MS.gene36377.t1 AT2G04570 44.654 318 175 1 29 346 26 342 7.43e-99 296
MS.gene36377.t1 AT5G42170 44.410 322 173 3 26 346 45 361 7.95e-97 292
MS.gene36377.t1 AT2G42990 41.875 320 185 1 29 348 26 344 1.10e-95 288
MS.gene36377.t1 AT4G26790 41.615 322 187 1 30 351 28 348 2.52e-93 283
MS.gene36377.t1 AT4G26790 41.615 322 187 1 30 351 28 348 2.52e-93 283
MS.gene36377.t1 AT3G14820 42.547 322 180 3 27 348 28 344 8.10e-92 279
MS.gene36377.t1 AT1G59406 41.193 352 200 5 1 351 1 346 1.05e-91 278
MS.gene36377.t1 AT1G59030 41.193 352 200 5 1 351 1 346 1.05e-91 278
MS.gene36377.t1 AT1G58725 41.193 352 200 5 1 351 1 346 1.05e-91 278
MS.gene36377.t1 AT1G20120 41.231 325 190 1 26 350 73 396 2.62e-90 276
MS.gene36377.t1 AT1G75900 41.358 324 182 3 28 348 40 358 2.16e-88 270
MS.gene36377.t1 AT2G24560 41.994 331 185 6 22 348 25 352 6.98e-88 269
MS.gene36377.t1 AT5G45960 43.590 312 169 4 29 335 45 354 7.04e-88 270
MS.gene36377.t1 AT2G30220 41.360 353 186 9 10 348 9 354 1.44e-87 268
MS.gene36377.t1 AT2G30310 41.975 324 175 6 21 337 24 341 1.86e-87 268
MS.gene36377.t1 AT1G75880 39.193 347 203 2 9 348 23 368 2.59e-87 268
MS.gene36377.t1 AT1G58430 41.411 326 186 5 23 345 27 350 1.42e-86 266
MS.gene36377.t1 AT1G75890 40.938 320 187 2 30 348 46 364 3.77e-86 265
MS.gene36377.t1 AT1G06990 39.198 324 193 3 27 348 33 354 4.79e-86 264
MS.gene36377.t1 AT1G75880 39.368 348 202 3 9 348 23 369 5.28e-86 265
MS.gene36377.t1 AT1G58520 41.033 329 181 5 26 353 25 341 5.28e-86 263
MS.gene36377.t1 AT1G58525 41.033 329 181 5 26 353 25 341 5.28e-86 263
MS.gene36377.t1 AT2G31540 40.841 333 182 7 21 345 25 350 5.28e-86 264
MS.gene36377.t1 AT1G75890 40.432 324 191 2 26 348 71 393 1.06e-85 265
MS.gene36377.t1 AT1G75890 39.339 333 187 3 30 348 46 377 5.94e-83 257
MS.gene36377.t1 AT2G40250 37.574 338 202 4 22 353 27 361 6.36e-82 254
MS.gene36377.t1 AT5G45950 40.566 318 182 4 29 346 38 348 6.28e-81 251
MS.gene36377.t1 AT5G63170 41.479 311 165 4 29 337 26 321 2.04e-78 244
MS.gene36377.t1 AT3G43570 38.344 326 168 4 26 351 25 317 2.16e-77 241
MS.gene36377.t1 AT1G20132 36.086 327 204 3 26 350 56 379 1.15e-73 233
MS.gene36377.t1 AT1G20130 36.257 342 198 5 25 353 198 532 1.03e-71 233
MS.gene36377.t1 AT1G20130 36.257 342 198 5 25 353 178 512 1.03e-71 232
MS.gene36377.t1 AT1G75920 35.693 339 204 3 12 348 11 337 6.33e-69 219
MS.gene36377.t1 AT1G23500 39.080 348 191 4 1 347 11 338 1.38e-68 219
MS.gene36377.t1 AT1G73610 34.561 353 209 5 3 348 1 338 1.96e-66 213
MS.gene36377.t1 AT2G24560 39.711 277 162 4 22 294 25 300 1.50e-65 210
MS.gene36377.t1 AT1G75920 34.463 354 203 4 12 348 6 347 2.44e-65 211
MS.gene36377.t1 AT3G43550 39.850 266 155 3 26 290 25 286 4.73e-65 208
MS.gene36377.t1 AT1G29670 36.950 341 196 11 11 342 10 340 1.77e-64 209
MS.gene36377.t1 AT3G04290 36.646 322 191 8 31 346 29 343 1.38e-63 207
MS.gene36377.t1 AT1G29670 36.950 341 196 11 11 342 78 408 1.38e-63 208
MS.gene36377.t1 AT1G75910 35.404 322 194 3 30 348 27 337 1.68e-62 203
MS.gene36377.t1 AT1G20135 34.954 329 198 5 10 337 9 322 3.75e-62 202
MS.gene36377.t1 AT4G28780 35.168 327 203 7 24 346 24 345 2.14e-61 201
MS.gene36377.t1 AT2G23540 34.254 362 219 7 9 353 17 376 2.25e-61 201
MS.gene36377.t1 AT5G33370 35.714 322 194 9 31 346 30 344 3.31e-60 198
MS.gene36377.t1 AT3G50400 35.180 361 214 10 1 346 1 356 6.13e-60 197
MS.gene36377.t1 AT5G15720 36.152 343 189 10 16 342 14 342 2.78e-59 195
MS.gene36377.t1 AT1G29660 34.582 347 216 8 1 342 1 341 4.94e-59 195
MS.gene36377.t1 AT5G18430 33.750 320 205 5 31 346 28 344 5.29e-58 192
MS.gene36377.t1 AT4G18970 35.093 322 198 7 26 342 23 338 4.39e-57 189
MS.gene36377.t1 AT1G75930 34.545 330 199 5 23 348 21 337 5.31e-57 189
MS.gene36377.t1 AT4G18970 35.093 322 198 7 26 342 23 338 1.67e-56 189
MS.gene36377.t1 AT1G75920 31.858 339 186 4 12 348 11 306 1.58e-55 184
MS.gene36377.t1 AT4G10950 30.599 317 215 4 29 343 69 382 2.21e-55 186
MS.gene36377.t1 AT1G75920 34.343 297 182 2 54 348 24 309 2.84e-55 184
MS.gene36377.t1 AT5G45670 34.675 323 202 6 23 341 21 338 3.09e-55 185
MS.gene36377.t1 AT5G41890 34.545 330 193 9 35 347 35 358 4.94e-54 182
MS.gene36377.t1 AT5G37690 33.968 315 197 7 35 345 31 338 2.66e-53 179
MS.gene36377.t1 AT1G71250 33.123 317 205 5 29 342 39 351 4.76e-53 179
MS.gene36377.t1 AT1G53920 33.333 330 207 8 26 349 43 365 6.35e-53 179
MS.gene36377.t1 AT1G33811 32.873 362 207 11 5 344 4 351 1.49e-52 178
MS.gene36377.t1 AT4G10950 30.284 317 212 5 29 343 69 378 1.52e-52 179
MS.gene36377.t1 AT1G71691 34.268 321 198 9 26 342 50 361 5.87e-51 174
MS.gene36377.t1 AT2G31550 39.070 215 117 6 138 345 2 209 5.17e-50 167
MS.gene36377.t1 AT2G19050 34.579 321 187 10 29 344 29 331 2.61e-49 169
MS.gene36377.t1 AT5G08460 29.912 341 227 7 9 342 28 363 2.80e-49 170
MS.gene36377.t1 AT5G37690 33.333 315 191 8 35 345 31 330 7.19e-49 168
MS.gene36377.t1 AT2G19010 32.827 329 194 11 30 351 29 337 1.84e-48 167
MS.gene36377.t1 AT2G19010 32.827 329 194 11 30 351 59 367 4.29e-48 167
MS.gene36377.t1 AT2G19060 33.234 337 196 12 28 353 27 345 5.05e-48 166
MS.gene36377.t1 AT1G71120 32.317 328 206 8 23 345 23 339 1.54e-47 165
MS.gene36377.t1 AT5G33370 36.090 266 159 7 31 290 30 290 9.48e-47 162
MS.gene36377.t1 AT1G74460 32.754 345 218 10 8 348 5 339 3.25e-46 161
MS.gene36377.t1 AT5G55050 31.402 328 209 10 29 346 37 358 2.26e-45 159
MS.gene36377.t1 AT5G15720 36.426 291 157 9 16 290 14 292 2.47e-45 157
MS.gene36377.t1 AT3G14225 28.963 328 221 6 31 349 37 361 1.92e-44 157
MS.gene36377.t1 AT3G14225 28.349 321 221 5 31 345 37 354 2.40e-43 154
MS.gene36377.t1 AT5G40990 29.283 321 218 5 31 345 37 354 2.37e-42 151
MS.gene36377.t1 AT4G30140 31.132 318 198 10 30 344 32 331 7.34e-42 149
MS.gene36377.t1 AT1G53940 29.429 350 230 8 9 345 11 356 2.08e-41 149
MS.gene36377.t1 AT4G16230 38.049 205 121 3 29 229 28 230 1.88e-40 143
MS.gene36377.t1 AT1G53990 29.014 355 223 9 9 349 9 348 1.90e-40 146
MS.gene36377.t1 AT1G28610 32.164 342 193 11 31 347 31 358 3.83e-37 137
MS.gene36377.t1 AT2G19050 33.460 263 159 7 29 289 29 277 9.31e-37 134
MS.gene36377.t1 AT1G71691 33.456 272 164 8 26 290 50 311 2.73e-36 134
MS.gene36377.t1 AT2G27360 31.268 339 200 11 31 346 33 361 2.95e-36 135
MS.gene36377.t1 AT5G14450 29.915 351 205 13 24 346 34 371 3.32e-36 135
MS.gene36377.t1 AT5G15720 31.955 266 155 7 92 342 57 311 4.20e-36 134
MS.gene36377.t1 AT1G28580 31.065 338 201 12 31 346 37 364 5.08e-35 132
MS.gene36377.t1 AT1G28650 30.861 337 203 12 31 346 37 364 5.85e-34 129
MS.gene36377.t1 AT1G28640 29.377 337 208 12 31 346 35 362 1.14e-33 128
MS.gene36377.t1 AT1G28570 29.851 335 211 11 31 347 34 362 1.38e-33 128
MS.gene36377.t1 AT1G31550 30.612 343 197 13 31 347 36 363 3.82e-33 127
MS.gene36377.t1 AT1G28600 29.396 364 217 14 10 346 7 357 4.33e-33 127
MS.gene36377.t1 AT1G28590 29.825 342 202 12 31 347 36 364 3.11e-31 122
MS.gene36377.t1 AT1G54790 27.405 343 212 12 30 346 31 362 5.37e-31 121
MS.gene36377.t1 AT1G71691 30.315 254 166 7 93 342 14 260 5.43e-31 119
MS.gene36377.t1 AT1G28670 30.473 338 204 12 31 346 35 363 6.41e-31 121
MS.gene36377.t1 AT3G48460 26.471 340 210 11 32 347 39 362 9.76e-31 120
MS.gene36377.t1 AT4G01130 27.540 374 232 14 6 351 8 370 9.81e-31 120
MS.gene36377.t1 AT1G67830 28.116 345 207 12 30 345 29 361 2.83e-30 119
MS.gene36377.t1 AT3G05180 27.679 336 212 10 30 342 35 362 3.82e-30 119
MS.gene36377.t1 AT1G53940 28.621 290 196 5 9 290 11 297 6.06e-30 117
MS.gene36377.t1 AT1G09390 28.615 325 213 9 28 342 34 349 9.23e-30 117
MS.gene36377.t1 AT1G31550 29.825 342 198 14 31 347 36 360 2.56e-29 117
MS.gene36377.t1 AT1G56670 26.807 332 212 10 27 342 36 352 2.66e-29 116
MS.gene36377.t1 AT2G03980 27.761 335 207 11 30 348 42 357 3.35e-29 116
MS.gene36377.t1 AT2G03980 27.761 335 207 11 30 348 42 357 3.35e-29 116
MS.gene36377.t1 AT2G03980 27.761 335 207 11 30 348 42 357 3.35e-29 116
MS.gene36377.t1 AT2G03980 27.761 335 207 11 30 348 42 357 3.35e-29 116
MS.gene36377.t1 AT1G28660 28.783 337 210 11 31 346 35 362 9.06e-29 115
MS.gene36377.t1 AT1G28660 28.783 337 209 12 31 346 35 361 2.17e-27 111
MS.gene36377.t1 AT3G14220 26.480 321 210 10 30 343 31 332 5.29e-27 110
MS.gene36377.t1 AT3G62280 26.647 334 210 11 30 346 35 350 8.55e-27 109
MS.gene36377.t1 AT1G54030 27.653 311 195 10 32 338 53 337 1.91e-26 109
MS.gene36377.t1 AT1G54020 27.103 321 205 10 29 342 29 327 7.74e-26 107
MS.gene36377.t1 AT1G54790 25.000 372 242 12 1 346 1 361 1.04e-25 106
MS.gene36377.t1 AT1G54010 25.749 334 220 9 29 353 32 346 1.27e-25 106
MS.gene36377.t1 AT3G26430 29.499 339 196 14 30 338 30 355 1.59e-25 106
MS.gene36377.t1 AT5G45910 28.075 374 227 16 3 346 1 362 3.73e-24 102
MS.gene36377.t1 AT3G27950 27.746 346 210 12 30 351 31 360 3.98e-24 102
MS.gene36377.t1 AT1G54000 25.680 331 218 10 23 345 28 338 8.15e-23 98.6
MS.gene36377.t1 AT2G04020 33.168 202 122 6 30 226 42 235 2.55e-22 95.1
MS.gene36377.t1 AT2G04020 33.168 202 122 6 30 226 42 235 5.60e-22 95.5
MS.gene36377.t1 AT1G28580 28.521 284 175 10 82 346 9 283 1.71e-21 93.6
MS.gene36377.t1 AT5G03610 25.205 365 235 11 4 347 3 350 9.85e-21 92.4
MS.gene36377.t1 AT1G54790 23.367 398 242 13 1 346 1 387 1.11e-20 92.8
MS.gene36377.t1 AT4G01130 26.923 286 176 10 95 351 3 284 2.71e-20 90.1
MS.gene36377.t1 AT3G09930 26.984 315 200 11 32 335 40 335 2.80e-20 90.9
MS.gene36377.t1 AT3G09930 26.984 315 200 11 32 335 40 335 2.80e-20 90.9
MS.gene36377.t1 AT3G14210 27.356 329 201 13 31 345 36 340 3.21e-20 91.3
MS.gene36377.t1 AT4G01130 26.490 302 194 11 6 290 8 298 4.06e-19 87.4
MS.gene36377.t1 AT4G16220 48.182 110 50 3 8 117 12 114 3.56e-18 83.2
MS.gene36377.t1 AT5G03600 26.136 352 205 13 3 335 21 336 3.90e-18 84.7
MS.gene36377.t1 AT1G56670 26.354 277 176 9 27 290 36 297 1.59e-17 82.4
MS.gene36377.t1 AT5G03600 25.595 336 195 13 29 345 12 311 2.30e-17 82.4
MS.gene36377.t1 AT1G54030 27.734 256 159 8 32 283 53 286 6.36e-17 80.9
MS.gene36377.t1 AT1G28570 26.733 202 134 6 157 347 1 199 3.03e-16 77.4
MS.gene36377.t1 AT1G28570 26.733 202 134 6 157 347 92 290 1.05e-15 77.4
MS.gene36377.t1 AT5G03980 25.316 237 152 8 130 353 94 318 2.55e-15 76.3
MS.gene36377.t1 AT1G54020 24.621 264 175 7 86 345 1 244 9.25e-15 74.3
MS.gene36377.t1 AT1G54020 24.621 264 175 7 86 345 1 244 9.25e-15 74.3
MS.gene36377.t1 AT1G54020 24.621 264 175 7 86 345 1 244 9.25e-15 74.3
MS.gene36377.t1 AT1G54020 25.926 189 136 3 158 345 10 195 3.42e-14 71.6
MS.gene36377.t1 AT4G16233 30.556 108 74 1 239 346 6 112 3.03e-13 66.6
MS.gene36377.t1 AT1G28610 33.133 166 86 7 29 179 29 184 2.50e-12 66.6
MS.gene36377.t1 AT1G28600 32.961 179 93 10 11 172 8 176 4.70e-12 65.5
MS.gene36377.t1 AT3G14210 25.561 223 149 6 129 345 1 212 5.07e-12 65.9

Find 69 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAATCCCCTTCAAAATT+TGG 0.113263 2.2:-2592374 MS.gene36377:intron
CCTGCTACAAGGACTTTATT+TGG 0.134135 2.2:-2592545 MS.gene36377:CDS
AACATAGGACTTGTATAAAT+TGG 0.146657 2.2:-2592615 MS.gene36377:intron
AAAACCTCCCAGTGGGTTTA+TGG 0.171244 2.2:+2593444 None:intergenic
GTGACAACTTTGTTGATTAA+AGG 0.259570 2.2:+2592844 None:intergenic
AAGGATTGACATAATAGTTT+TGG 0.271788 2.2:+2592863 None:intergenic
TAAGACCAGGAAGTTGCTTT+TGG 0.276088 2.2:+2592438 None:intergenic
AAAGCTAACTATCCTCCTTA+TGG 0.312317 2.2:-2593482 MS.gene36377:CDS
AGGAAAGGCTGCTGTGGAAC+TGG 0.322949 2.2:-2592243 MS.gene36377:CDS
CAAGATAGCTGGAAGTAAAA+AGG 0.328561 2.2:-2592944 MS.gene36377:CDS
ATGCAAGTCAGTATGTGTTT+TGG 0.333872 2.2:-2592164 MS.gene36377:CDS
GGCATAAGCCTTATCGGTTA+AGG 0.371190 2.2:-2592081 None:intergenic
GAACAAGGCATAAGCCTTAT+CGG 0.374261 2.2:-2592087 MS.gene36377:CDS
AAGGCAGCGTCAATTATTAA+AGG 0.388064 2.2:-2592925 MS.gene36377:CDS
TCACCAAACGTCACGATTGC+CGG 0.392033 2.2:+2593551 None:intergenic
GTGACTTCACTACCACCATT+AGG 0.399108 2.2:-2592575 MS.gene36377:CDS
ACATAGGACTTGTATAAATT+GGG 0.401221 2.2:-2592614 MS.gene36377:intron
AAACTCCAAAAGCAACTTCC+TGG 0.409834 2.2:-2592443 MS.gene36377:CDS
TGGTGACTCTGCTGTGGATG+TGG 0.414876 2.2:-2593534 MS.gene36377:CDS
CAAAATTTGCTCCAATAAGA+AGG 0.415639 2.2:+2593145 None:intergenic
AAATTAGCTACTGATATTAC+TGG 0.418320 2.2:-2593413 MS.gene36377:intron
CTTGCATTAGAACAGGTTCC+TGG 0.425083 2.2:+2592180 None:intergenic
GGTGACTCTGCTGTGGATGT+GGG 0.428006 2.2:-2593533 MS.gene36377:CDS
TACATACTCAAGTTTCGTTA+AGG 0.429424 2.2:-2592791 MS.gene36377:intron
GTTCCGGCAATCGTGACGTT+TGG 0.433443 2.2:-2593554 MS.gene36377:CDS
TATCTTAGCCCTCAAGCAAC+AGG 0.436881 2.2:-2593174 MS.gene36377:CDS
CGCTACTTCCACCACTCAAT+AGG 0.442023 2.2:+2592893 None:intergenic
TTGTGACACAACCTTTCTCA+TGG 0.465372 2.2:+2592519 None:intergenic
TTATTTGGATTCCATGAGAA+AGG 0.465710 2.2:-2592530 MS.gene36377:CDS
TGACTTCACTACCACCATTA+GGG 0.466682 2.2:-2592574 MS.gene36377:CDS
CTATCTTGGAAAGCTTACTT+TGG 0.467774 2.2:+2592959 None:intergenic
ATACTGACTTGCATTAGAAC+AGG 0.469568 2.2:+2592173 None:intergenic
CTAACAAAGTCTCTTCCATA+AGG 0.478982 2.2:+2593467 None:intergenic
AGTAAGCTTTCCAAGATAGC+TGG 0.479298 2.2:-2592955 MS.gene36377:CDS
TGCATCTGGTTATGATGAAA+AGG 0.486563 2.2:-2593115 MS.gene36377:CDS
CCAAATAAAGTCCTTGTAGC+AGG 0.493070 2.2:+2592545 None:intergenic
ACAAGATGATACCGTTGTTC+CGG 0.509338 2.2:-2593570 MS.gene36377:CDS
GGAAAGGCTGCTGTGGAACT+GGG 0.509378 2.2:-2592242 MS.gene36377:CDS
TCAATGCATCAGCTAGAACT+TGG 0.522397 2.2:+2592112 None:intergenic
GCATGAATCCTTAACCGATA+AGG 0.523528 2.2:+2592073 None:intergenic
AGGTATGTAGAATATTGATC+AGG 0.529056 2.2:+2592820 None:intergenic
GGTTAGCAGCTTCTGAAGGA+TGG 0.537602 2.2:+2592133 None:intergenic
GTAGCAGGTAGGCACCCTAA+TGG 0.548059 2.2:+2592560 None:intergenic
GAGGCAAGGAAAGGCTGCTG+TGG 0.548555 2.2:-2592249 MS.gene36377:CDS
TTTGTTAGCCATAAACCCAC+TGG 0.558300 2.2:-2593452 MS.gene36377:CDS
CCATTGCAAAACCTCCCAGT+GGG 0.560224 2.2:+2593437 None:intergenic
GCTTGAGGGCTAAGATATGC+AGG 0.564871 2.2:+2593180 None:intergenic
GTGACTCTGCTGTGGATGTG+GGG 0.573179 2.2:-2593532 MS.gene36377:CDS
GACGTTTGGTGACTCTGCTG+TGG 0.577397 2.2:-2593540 MS.gene36377:CDS
ACTTGGTTAGCAGCTTCTGA+AGG 0.578036 2.2:+2592129 None:intergenic
CGTCACGATTGCCGGAACAA+CGG 0.582020 2.2:+2593559 None:intergenic
TAGGGTGCCTACCTGCTACA+AGG 0.583654 2.2:-2592556 MS.gene36377:CDS
TCAATATTCTACATACCTTG+TGG 0.597097 2.2:-2592815 MS.gene36377:CDS
GATTGAACAAGTTCATAGAG+AGG 0.612422 2.2:+2592389 None:intergenic
ACAAAGTCTCTTCCATAAGG+AGG 0.615968 2.2:+2593470 None:intergenic
GCAACAGTTAAAATATTACA+AGG 0.623783 2.2:-2592986 MS.gene36377:CDS
TTGTGCAATCAAAAGTCACC+AGG 0.626995 2.2:-2592198 MS.gene36377:CDS
AGAATCAACAATGATGCACA+AGG 0.648841 2.2:-2592497 MS.gene36377:CDS
AAGACAACAATCTTAAGACC+AGG 0.651941 2.2:+2592425 None:intergenic
TTGTTAGCCATAAACCCACT+GGG 0.652946 2.2:-2593451 MS.gene36377:CDS
GCTGATGCATTGATTGAACA+AGG 0.656923 2.2:-2592102 MS.gene36377:CDS
GCAGGTAGGCACCCTAATGG+TGG 0.657841 2.2:+2592563 None:intergenic
GCCATTGCAAAACCTCCCAG+TGG 0.660851 2.2:+2593436 None:intergenic
ATTTAACAAGAAAATCAACT+CGG 0.690738 2.2:-2592474 MS.gene36377:CDS
GCATTGTACCTATTGAGTGG+TGG 0.691170 2.2:-2592901 MS.gene36377:CDS
AACTTGAGTATGTATCCACA+AGG 0.693953 2.2:+2592800 None:intergenic
ATAAAGTCCTTGTAGCAGGT+AGG 0.705956 2.2:+2592549 None:intergenic
TTAGCCATAAACCCACTGGG+AGG 0.727905 2.2:-2593448 MS.gene36377:CDS
GGTGCATTGTACCTATTGAG+TGG 0.748700 2.2:-2592904 MS.gene36377:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAGAAGAGTTAAAA+AGG + chr2.2:2592692-2592711 None:intergenic 15.0%
!! ATTTAACAAGAAAATCAACT+CGG - chr2.2:2593247-2593266 MS.gene36377:intron 20.0%
!!! ATACTTTTACTAGAATAACA+TGG - chr2.2:2593376-2593395 MS.gene36377:intron 20.0%
!!! TACTTTTACTAGAATAACAT+GGG - chr2.2:2593377-2593396 MS.gene36377:intron 20.0%
!!! TTCAAATGGTTTTATTTGTA+AGG + chr2.2:2593072-2593091 None:intergenic 20.0%
! AAAAACAAAGCAACTTCAAA+TGG + chr2.2:2593086-2593105 None:intergenic 25.0%
! AAATTAGCTACTGATATTAC+TGG - chr2.2:2592308-2592327 MS.gene36377:intron 25.0%
! AACATAGGACTTGTATAAAT+TGG - chr2.2:2593106-2593125 MS.gene36377:CDS 25.0%
! ACATAGGACTTGTATAAATT+GGG - chr2.2:2593107-2593126 MS.gene36377:CDS 25.0%
! GCAACAGTTAAAATATTACA+AGG - chr2.2:2592735-2592754 MS.gene36377:intron 25.0%
!! AAATGTTAGTATTTTCTCCA+TGG - chr2.2:2592396-2592415 MS.gene36377:CDS 25.0%
!! AAGGATTGACATAATAGTTT+TGG + chr2.2:2592861-2592880 None:intergenic 25.0%
!! AATGTTAGTATTTTCTCCAT+GGG - chr2.2:2592397-2592416 MS.gene36377:CDS 25.0%
!! ATTGCTTACCAAATTTTGAA+GGG + chr2.2:2593358-2593377 None:intergenic 25.0%
!! TATTGCTTACCAAATTTTGA+AGG + chr2.2:2593359-2593378 None:intergenic 25.0%
!!! AGTTGCTTTGTTTTTAACAT+AGG - chr2.2:2593091-2593110 MS.gene36377:intron 25.0%
!!! ATTAGTATTAGAAGTGTTGA+AGG + chr2.2:2592446-2592465 None:intergenic 25.0%
AAATTGGGAGCTAGAAAAAT+TGG - chr2.2:2593122-2593141 MS.gene36377:CDS 30.0%
ACAGGAAAAAACCTTCTTAT+TGG - chr2.2:2592565-2592584 MS.gene36377:CDS 30.0%
AGGTATGTAGAATATTGATC+AGG + chr2.2:2592904-2592923 None:intergenic 30.0%
TACATACTCAAGTTTCGTTA+AGG - chr2.2:2592930-2592949 MS.gene36377:CDS 30.0%
TCAATATTCTACATACCTTG+TGG - chr2.2:2592906-2592925 MS.gene36377:CDS 30.0%
TCTATCTTGTGACATTCAAT+AGG - chr2.2:2593442-2593461 MS.gene36377:CDS 30.0%
TTATTTGGATTCCATGAGAA+AGG - chr2.2:2593191-2593210 MS.gene36377:CDS 30.0%
TTATTTGTAAGGATGTGGTA+TGG + chr2.2:2593061-2593080 None:intergenic 30.0%
! CAAAATTTGCTCCAATAAGA+AGG + chr2.2:2592579-2592598 None:intergenic 30.0%
! GTGACAACTTTGTTGATTAA+AGG + chr2.2:2592880-2592899 None:intergenic 30.0%
! GTGTTTGCATTTGTGTTTTT+GGG - chr2.2:2592116-2592135 MS.gene36377:CDS 30.0%
! TGTGTTTGCATTTGTGTTTT+TGG - chr2.2:2592115-2592134 MS.gene36377:CDS 30.0%
!! AAGTGTTGAAGGTCTTAAAA+GGG + chr2.2:2592435-2592454 None:intergenic 30.0%
!! TGACTTTTGATTGCACAATA+AGG + chr2.2:2593521-2593540 None:intergenic 30.0%
!! TTGCTTACCAAATTTTGAAG+GGG + chr2.2:2593357-2593376 None:intergenic 30.0%
!!! TATTTTAACTGTTGCGACAA+TGG + chr2.2:2592730-2592749 None:intergenic 30.0%
!!! TGGTTTTATTTGTAAGGATG+TGG + chr2.2:2593066-2593085 None:intergenic 30.0%
AAAGCTAACTATCCTCCTTA+TGG - chr2.2:2592239-2592258 MS.gene36377:CDS 35.0%
AACTTGAGTATGTATCCACA+AGG + chr2.2:2592924-2592943 None:intergenic 35.0%
AAGACAACAATCTTAAGACC+AGG + chr2.2:2593299-2593318 None:intergenic 35.0%
AAGGCAGCGTCAATTATTAA+AGG - chr2.2:2592796-2592815 MS.gene36377:CDS 35.0%
AGAATCAACAATGATGCACA+AGG - chr2.2:2593224-2593243 MS.gene36377:intron 35.0%
CAAGATAGCTGGAAGTAAAA+AGG - chr2.2:2592777-2592796 MS.gene36377:intron 35.0%
CTAACAAAGTCTCTTCCATA+AGG + chr2.2:2592257-2592276 None:intergenic 35.0%
CTATCTTGGAAAGCTTACTT+TGG + chr2.2:2592765-2592784 None:intergenic 35.0%
GATTGAACAAGTTCATAGAG+AGG + chr2.2:2593335-2593354 None:intergenic 35.0%
GTTCAATCCCCTTCAAAATT+TGG - chr2.2:2593347-2593366 MS.gene36377:intron 35.0%
TGCATCTGGTTATGATGAAA+AGG - chr2.2:2592606-2592625 MS.gene36377:CDS 35.0%
! ATGCAAGTCAGTATGTGTTT+TGG - chr2.2:2593557-2593576 MS.gene36377:CDS 35.0%
! CTTTTTACTTCCAGCTATCT+TGG + chr2.2:2592779-2592798 None:intergenic 35.0%
! CTTTTTGTAGCTGAAACACT+GGG - chr2.2:2592502-2592521 MS.gene36377:CDS 35.0%
! GTGACATTCAATAGGTTTTG+CGG - chr2.2:2593450-2593469 MS.gene36377:CDS 35.0%
! TCTTTTTGTAGCTGAAACAC+TGG - chr2.2:2592501-2592520 MS.gene36377:CDS 35.0%
! TGCAAGTCAGTATGTGTTTT+GGG - chr2.2:2593558-2593577 MS.gene36377:CDS 35.0%
!! ATACTGACTTGCATTAGAAC+AGG + chr2.2:2593551-2593570 None:intergenic 35.0%
!! GAAGTGTTGAAGGTCTTAAA+AGG + chr2.2:2592436-2592455 None:intergenic 35.0%
!!! TGCATTTGTGTTTTTGGGAT+GGG - chr2.2:2592121-2592140 MS.gene36377:CDS 35.0%
!!! TTGCATTTGTGTTTTTGGGA+TGG - chr2.2:2592120-2592139 MS.gene36377:CDS 35.0%
AAACTCCAAAAGCAACTTCC+TGG - chr2.2:2593278-2593297 MS.gene36377:intron 40.0%
ACAAAGTCTCTTCCATAAGG+AGG + chr2.2:2592254-2592273 None:intergenic 40.0%
ACAAGATGATACCGTTGTTC+CGG - chr2.2:2592151-2592170 MS.gene36377:CDS 40.0%
AGTAAGCTTTCCAAGATAGC+TGG - chr2.2:2592766-2592785 MS.gene36377:intron 40.0%
ATAAAGTCCTTGTAGCAGGT+AGG + chr2.2:2593175-2593194 None:intergenic 40.0%
CCAAATAAAGTCCTTGTAGC+AGG + chr2.2:2593179-2593198 None:intergenic 40.0%
CCTGCTACAAGGACTTTATT+TGG - chr2.2:2593176-2593195 MS.gene36377:CDS 40.0%
GTAAGGATGTGGTATGGTTA+TGG + chr2.2:2593055-2593074 None:intergenic 40.0%
TCAATGCATCAGCTAGAACT+TGG + chr2.2:2593612-2593631 None:intergenic 40.0%
TGACTTCACTACCACCATTA+GGG - chr2.2:2593147-2593166 MS.gene36377:CDS 40.0%
TTCTCCATGGGTTTGAATCT+CGG - chr2.2:2592409-2592428 MS.gene36377:CDS 40.0%
TTGTGACACAACCTTTCTCA+TGG + chr2.2:2593205-2593224 None:intergenic 40.0%
TTGTGCAATCAAAAGTCACC+AGG - chr2.2:2593523-2593542 MS.gene36377:CDS 40.0%
TTGTTAGCCATAAACCCACT+GGG - chr2.2:2592270-2592289 MS.gene36377:intron 40.0%
TTTGTTAGCCATAAACCCAC+TGG - chr2.2:2592269-2592288 MS.gene36377:intron 40.0%
! AATTTTGCTTCAGCTGCATC+TGG - chr2.2:2592592-2592611 MS.gene36377:CDS 40.0%
! ACATTCAATAGGTTTTGCGG+AGG - chr2.2:2593453-2593472 MS.gene36377:CDS 40.0%
! GAACAAGGCATAAGCCTTAT+CGG - chr2.2:2593634-2593653 MS.gene36377:CDS 40.0%
!! GCTGATGCATTGATTGAACA+AGG - chr2.2:2593619-2593638 MS.gene36377:CDS 40.0%
!! TAAGACCAGGAAGTTGCTTT+TGG + chr2.2:2593286-2593305 None:intergenic 40.0%
!!! AGGTTTTTTCCTGTTGCTTG+AGG + chr2.2:2592559-2592578 None:intergenic 40.0%
!!! CATTTGTGTTTTTGGGATGG+GGG - chr2.2:2592123-2592142 MS.gene36377:CDS 40.0%
!!! GCATTTGTGTTTTTGGGATG+GGG - chr2.2:2592122-2592141 MS.gene36377:CDS 40.0%
!!! GGTTTTTTCCTGTTGCTTGA+GGG + chr2.2:2592558-2592577 None:intergenic 40.0%
ACTTGGTTAGCAGCTTCTGA+AGG + chr2.2:2593595-2593614 None:intergenic 45.0%
CTTGCATTAGAACAGGTTCC+TGG + chr2.2:2593544-2593563 None:intergenic 45.0%
GCATTGTACCTATTGAGTGG+TGG - chr2.2:2592820-2592839 MS.gene36377:CDS 45.0%
GGTGCATTGTACCTATTGAG+TGG - chr2.2:2592817-2592836 MS.gene36377:CDS 45.0%
GTGACTTCACTACCACCATT+AGG - chr2.2:2593146-2593165 MS.gene36377:CDS 45.0%
TATCTTAGCCCTCAAGCAAC+AGG - chr2.2:2592547-2592566 MS.gene36377:CDS 45.0%
! AAAACCTCCCAGTGGGTTTA+TGG + chr2.2:2592280-2592299 None:intergenic 45.0%
!!! TTGCTTTTGGAGTTTCGCTG+TGG + chr2.2:2593273-2593292 None:intergenic 45.0%
!!! ATTGTAATTTTTTTTTTAAT+AGG - chr2.2:2592371-2592390 MS.gene36377:intron 5.0%
CCATTGCAAAACCTCCCAGT+GGG + chr2.2:2592287-2592306 None:intergenic 50.0%
CGCTACTTCCACCACTCAAT+AGG + chr2.2:2592831-2592850 None:intergenic 50.0%
GCTTGAGGGCTAAGATATGC+AGG + chr2.2:2592544-2592563 None:intergenic 50.0%
TCACCAAACGTCACGATTGC+CGG + chr2.2:2592173-2592192 None:intergenic 50.0%
TTAGCCATAAACCCACTGGG+AGG - chr2.2:2592273-2592292 MS.gene36377:intron 50.0%
! CAATAGGTTTTGCGGAGGCA+AGG - chr2.2:2593458-2593477 MS.gene36377:CDS 50.0%
! GGTTAGCAGCTTCTGAAGGA+TGG + chr2.2:2593591-2593610 None:intergenic 50.0%
AGGAAAGGCTGCTGTGGAAC+TGG - chr2.2:2593478-2593497 MS.gene36377:CDS 55.0%
AGGGCCGAGATTCAAACCCA+TGG + chr2.2:2592416-2592435 None:intergenic 55.0%
CGTCACGATTGCCGGAACAA+CGG + chr2.2:2592165-2592184 None:intergenic 55.0%
GCCATTGCAAAACCTCCCAG+TGG + chr2.2:2592288-2592307 None:intergenic 55.0%
GGAAAGGCTGCTGTGGAACT+GGG - chr2.2:2593479-2593498 MS.gene36377:CDS 55.0%
GGTGACTCTGCTGTGGATGT+GGG - chr2.2:2592188-2592207 MS.gene36377:CDS 55.0%
GTAGCAGGTAGGCACCCTAA+TGG + chr2.2:2593164-2593183 None:intergenic 55.0%
GTGACTCTGCTGTGGATGTG+GGG - chr2.2:2592189-2592208 MS.gene36377:CDS 55.0%
GTTCCGGCAATCGTGACGTT+TGG - chr2.2:2592167-2592186 MS.gene36377:CDS 55.0%
TGGTGACTCTGCTGTGGATG+TGG - chr2.2:2592187-2592206 MS.gene36377:CDS 55.0%
! CCCACTGGGAGGTTTTGCAA+TGG - chr2.2:2592284-2592303 MS.gene36377:intron 55.0%
! GACGTTTGGTGACTCTGCTG+TGG - chr2.2:2592181-2592200 MS.gene36377:CDS 55.0%
! GGTTTTGCGGAGGCAAGGAA+AGG - chr2.2:2593463-2593482 MS.gene36377:CDS 55.0%
! TAGGGTGCCTACCTGCTACA+AGG - chr2.2:2593165-2593184 MS.gene36377:CDS 55.0%
GAGGCAAGGAAAGGCTGCTG+TGG - chr2.2:2593472-2593491 MS.gene36377:CDS 60.0%
GCAGGTAGGCACCCTAATGG+TGG + chr2.2:2593161-2593180 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2592083 2593660 2592083 ID=MS.gene36377
chr2.2 mRNA 2592083 2593660 2592083 ID=MS.gene36377.t1;Parent=MS.gene36377
chr2.2 exon 2593414 2593660 2593414 ID=MS.gene36377.t1.exon1;Parent=MS.gene36377.t1
chr2.2 CDS 2593414 2593660 2593414 ID=cds.MS.gene36377.t1;Parent=MS.gene36377.t1
chr2.2 exon 2593101 2593231 2593101 ID=MS.gene36377.t1.exon2;Parent=MS.gene36377.t1
chr2.2 CDS 2593101 2593231 2593101 ID=cds.MS.gene36377.t1;Parent=MS.gene36377.t1
chr2.2 exon 2592792 2593025 2592792 ID=MS.gene36377.t1.exon3;Parent=MS.gene36377.t1
chr2.2 CDS 2592792 2593025 2592792 ID=cds.MS.gene36377.t1;Parent=MS.gene36377.t1
chr2.2 exon 2592375 2592630 2592375 ID=MS.gene36377.t1.exon4;Parent=MS.gene36377.t1
chr2.2 CDS 2592375 2592630 2592375 ID=cds.MS.gene36377.t1;Parent=MS.gene36377.t1
chr2.2 exon 2592083 2592279 2592083 ID=MS.gene36377.t1.exon5;Parent=MS.gene36377.t1
chr2.2 CDS 2592083 2592279 2592083 ID=cds.MS.gene36377.t1;Parent=MS.gene36377.t1
Gene Sequence

>MS.gene36377

ATGAAGATGAGTATTAGAGAAGCATTTTTTGTTGTGTTTGCATTTGTGTTTTTGGGATGGGGGAATGCACAAGATGATACCGTTGTTCCGGCAATCGTGACGTTTGGTGACTCTGCTGTGGATGTGGGGAACAATGACTATCTTTTCACTCTTTTTAAAGCTAACTATCCTCCTTATGGAAGAGACTTTGTTAGCCATAAACCCACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATTACTGGTAAGAATATAAACATCAAACATGCAACTCTCTTAGCTTAGATTGTAATTTTTTTTTTAATAGGCAAAATGTTAGTATTTTCTCCATGGGTTTGAATCTCGGCCCTTTTAAGACCTTCAACACTTCTAATACTAATGTTAAACATGTAACTTTCATTCTTATTGAGTTGTTTCTTTTTGTAGCTGAAACACTGGGTTTTAAGAGTTATGCACCTGCATATCTTAGCCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATTTTGAACGTAAGTTTGTGATGAACAAAGCAAACACGCGCACTTGAAGATTCGTCCTTTTTAACTCTTCTATTTTTTTCACAGCACGCGATTCCATTGTCGCAACAGTTAAAATATTACAAGGAATACCAAAGTAAGCTTTCCAAGATAGCTGGAAGTAAAAAGGCAGCGTCAATTATTAAAGGTGCATTGTACCTATTGAGTGGTGGAAGTAGCGACTTTGTCCAAAACTATTATGTCAATCCTTTAATCAACAAAGTTGTCACTCCTGATCAATATTCTACATACCTTGTGGATACATACTCAAGTTTCGTTAAGGTATTTTGTTCTTCTGTTGTCATTAGAAATGTTGTAATAACTTATATTTATAATAATTGTACTCTTCTAAAACTTTGAAATATATCATAAGTATTATTTTCCATAACCATACCACATCCTTACAAATAAAACCATTTGAAGTTGCTTTGTTTTTAACATAGGACTTGTATAAATTGGGAGCTAGAAAAATTGGAGTGACTTCACTACCACCATTAGGGTGCCTACCTGCTACAAGGACTTTATTTGGATTCCATGAGAAAGGTTGTGTCACAAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATCAACTCGGCCACAGCGAAACTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTAATATTTACAAACCTCTCTATGAACTTGTTCAATCCCCTTCAAAATTTGGTAAGCAATACTTTTACTAGAATAACATGGGATATTCACTTTTTCTGTAAAAGAATGTTACTTATTCTCGTAATCTATCTTGTGACATTCAATAGGTTTTGCGGAGGCAAGGAAAGGCTGCTGTGGAACTGGGATTGTAGAGACGACATCCTTATTGTGCAATCAAAAGTCACCAGGAACCTGTTCTAATGCAAGTCAGTATGTGTTTTGGGACAGTGTCCATCCTTCAGAAGCTGCTAACCAAGTTCTAGCTGATGCATTGATTGAACAAGGCATAAGCCTTATCGGTTAA

Protein sequence

>MS.gene36377.t1

MKMSIREAFFVVFAFVFLGWGNAQDDTVVPAIVTFGDSAVDVGNNDYLFTLFKANYPPYGRDFVSHKPTGRFCNGKLATDITAETLGFKSYAPAYLSPQATGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYQSKLSKIAGSKKAASIIKGALYLLSGGSSDFVQNYYVNPLINKVVTPDQYSTYLVDTYSSFVKDLYKLGARKIGVTSLPPLGCLPATRTLFGFHEKGCVTRINNDAQGFNKKINSATAKLQKQLPGLKIVVFNIYKPLYELVQSPSKFGFAEARKGCCGTGIVETTSLLCNQKSPGTCSNASQYVFWDSVHPSEAANQVLADALIEQGISLIG