Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37127.t1 | XP_024642408.1 | 98.1 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 2.10E-78 | 302 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37127.t1 | Q9M895 | 74.8 | 155 | 39 | 0 | 1 | 155 | 461 | 615 | 7.4e-61 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37127.t1 | A0A072U7X6 | 98.1 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 1.5e-78 | 302.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene37127 | 0.827342 | 1.65E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene37127 | 0.823065 | 1.69E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene37127 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene37127 | 0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene37127 | 0.813472 | 2.52E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene37127 | 0.8054 | 1.36E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene37127 | 0.830635 | 2.63E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene37127 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene37127 | 0.814653 | 1.38E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene37127 | -0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene37127 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene37127 | -0.816573 | 5.16E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene37127 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene37127 | 0.816159 | 6.38E-52 | -1.69E-46 |
| MS.gene053284 | MS.gene37127 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene37127 | -0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene37127 | 0.827462 | 1.54E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene37127 | 0.813113 | 3.02E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene37127 | 0.814461 | 1.52E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene37127 | 0.826054 | 3.35E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene37127 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene37127 | 0.813076 | 3.07E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene37127 | -0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene37127 | 0.800071 | 1.71E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene37127 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene37127 | 0.815399 | 9.43E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene37127 | 0.805878 | 1.08E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene37127 | 0.808248 | 3.40E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene37127 | 0.805736 | 1.16E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene37127 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene37127 | 0.814517 | 1.48E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37127.t1 | MTR_6g016600 | 98.065 | 155 | 3 | 0 | 1 | 155 | 447 | 601 | 5.23e-105 | 314 |
| MS.gene37127.t1 | MTR_5g069780 | 51.200 | 125 | 57 | 2 | 1 | 123 | 447 | 569 | 2.23e-29 | 114 |
| MS.gene37127.t1 | MTR_7g010800 | 49.206 | 126 | 62 | 1 | 1 | 126 | 339 | 462 | 7.05e-29 | 112 |
| MS.gene37127.t1 | MTR_7g096060 | 41.860 | 129 | 75 | 0 | 1 | 129 | 374 | 502 | 1.08e-28 | 112 |
| MS.gene37127.t1 | MTR_3g115110 | 45.985 | 137 | 69 | 2 | 1 | 137 | 382 | 513 | 1.84e-28 | 111 |
| MS.gene37127.t1 | MTR_3g462930 | 49.180 | 122 | 58 | 2 | 1 | 120 | 438 | 557 | 7.37e-28 | 110 |
| MS.gene37127.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 2.03e-27 | 108 |
| MS.gene37127.t1 | MTR_2g101290 | 43.651 | 126 | 69 | 1 | 1 | 126 | 548 | 671 | 2.19e-27 | 108 |
| MS.gene37127.t1 | MTR_2g438140 | 39.130 | 184 | 106 | 4 | 1 | 181 | 419 | 599 | 1.31e-26 | 106 |
| MS.gene37127.t1 | MTR_6g059690 | 42.063 | 126 | 73 | 0 | 1 | 126 | 331 | 456 | 1.56e-26 | 106 |
| MS.gene37127.t1 | MTR_2g438140 | 39.130 | 184 | 106 | 4 | 1 | 181 | 359 | 539 | 1.78e-26 | 106 |
| MS.gene37127.t1 | MTR_4g094662 | 39.130 | 184 | 106 | 4 | 1 | 181 | 362 | 542 | 2.53e-26 | 105 |
| MS.gene37127.t1 | MTR_0376s0020 | 40.164 | 122 | 73 | 0 | 1 | 122 | 134 | 255 | 1.56e-25 | 103 |
| MS.gene37127.t1 | MTR_7g078570 | 41.270 | 126 | 74 | 0 | 1 | 126 | 326 | 451 | 1.19e-24 | 100 |
| MS.gene37127.t1 | MTR_3g104470 | 42.336 | 137 | 74 | 2 | 1 | 137 | 354 | 485 | 5.17e-24 | 99.0 |
| MS.gene37127.t1 | MTR_1g028390 | 42.748 | 131 | 73 | 1 | 1 | 131 | 458 | 586 | 1.19e-23 | 98.2 |
| MS.gene37127.t1 | MTR_4g064350 | 40.476 | 126 | 75 | 0 | 1 | 126 | 454 | 579 | 1.59e-23 | 97.8 |
| MS.gene37127.t1 | MTR_5g075340 | 44.615 | 130 | 67 | 3 | 1 | 130 | 359 | 483 | 8.03e-23 | 95.5 |
| MS.gene37127.t1 | MTR_1g044600 | 39.683 | 126 | 76 | 0 | 1 | 126 | 262 | 387 | 1.22e-22 | 94.7 |
| MS.gene37127.t1 | MTR_3g104480 | 41.606 | 137 | 75 | 2 | 1 | 137 | 352 | 483 | 1.32e-22 | 95.1 |
| MS.gene37127.t1 | MTR_3g096000 | 39.552 | 134 | 78 | 2 | 1 | 131 | 430 | 563 | 6.87e-22 | 92.8 |
| MS.gene37127.t1 | MTR_7g089040 | 47.312 | 93 | 47 | 1 | 1 | 93 | 818 | 908 | 9.37e-21 | 89.7 |
| MS.gene37127.t1 | MTR_7g089040 | 43.434 | 99 | 55 | 1 | 1 | 99 | 515 | 612 | 2.37e-13 | 68.2 |
| MS.gene37127.t1 | MTR_1g063380 | 44.762 | 105 | 56 | 1 | 1 | 105 | 336 | 438 | 1.68e-20 | 89.0 |
| MS.gene37127.t1 | MTR_1g063380 | 37.719 | 114 | 61 | 2 | 1 | 114 | 612 | 715 | 6.80e-17 | 78.6 |
| MS.gene37127.t1 | MTR_7g101870 | 43.810 | 105 | 57 | 1 | 1 | 105 | 337 | 439 | 3.95e-20 | 87.8 |
| MS.gene37127.t1 | MTR_7g101870 | 32.836 | 134 | 80 | 2 | 1 | 134 | 613 | 736 | 1.46e-16 | 77.4 |
| MS.gene37127.t1 | MTR_3g117230 | 39.286 | 112 | 66 | 1 | 1 | 112 | 273 | 382 | 5.28e-20 | 87.0 |
| MS.gene37127.t1 | MTR_1g083330 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 9.38e-20 | 86.3 |
| MS.gene37127.t1 | MTR_4g033235 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 1.01e-19 | 86.3 |
| MS.gene37127.t1 | MTR_8g056860 | 41.748 | 103 | 58 | 1 | 10 | 112 | 616 | 716 | 1.05e-19 | 86.7 |
| MS.gene37127.t1 | MTR_2g007010 | 51.087 | 92 | 43 | 1 | 5 | 96 | 376 | 465 | 1.33e-19 | 86.3 |
| MS.gene37127.t1 | MTR_2g007010 | 38.710 | 93 | 57 | 0 | 1 | 93 | 659 | 751 | 3.42e-12 | 64.7 |
| MS.gene37127.t1 | MTR_1g095660 | 38.053 | 113 | 68 | 1 | 1 | 113 | 258 | 368 | 1.74e-19 | 85.1 |
| MS.gene37127.t1 | MTR_8g023550 | 38.793 | 116 | 69 | 1 | 1 | 116 | 284 | 397 | 1.93e-19 | 85.5 |
| MS.gene37127.t1 | MTR_3g112260 | 38.393 | 112 | 67 | 1 | 1 | 112 | 270 | 379 | 2.41e-19 | 85.1 |
| MS.gene37127.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 196 | 323 | 2.45e-19 | 85.5 |
| MS.gene37127.t1 | MTR_2g095320 | 42.857 | 105 | 58 | 1 | 1 | 105 | 280 | 382 | 2.58e-19 | 85.5 |
| MS.gene37127.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 372 | 499 | 3.10e-19 | 85.1 |
| MS.gene37127.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 146 | 273 | 3.22e-19 | 85.1 |
| MS.gene37127.t1 | MTR_5g075360 | 42.308 | 130 | 73 | 2 | 1 | 130 | 322 | 449 | 3.62e-19 | 85.1 |
| MS.gene37127.t1 | MTR_8g099605 | 37.069 | 116 | 71 | 1 | 1 | 116 | 545 | 658 | 1.12e-18 | 83.6 |
| MS.gene37127.t1 | MTR_8g099605 | 37.069 | 116 | 71 | 1 | 1 | 116 | 304 | 417 | 1.54e-18 | 83.2 |
| MS.gene37127.t1 | MTR_2g078630 | 44.330 | 97 | 53 | 1 | 1 | 97 | 202 | 297 | 1.28e-17 | 80.9 |
| MS.gene37127.t1 | MTR_2g078630 | 44.792 | 96 | 52 | 1 | 1 | 96 | 730 | 824 | 1.86e-17 | 80.5 |
| MS.gene37127.t1 | MTR_5g074850 | 39.286 | 112 | 66 | 1 | 1 | 112 | 636 | 745 | 3.21e-17 | 79.3 |
| MS.gene37127.t1 | MTR_7g099640 | 40.000 | 115 | 67 | 1 | 1 | 115 | 321 | 433 | 3.90e-17 | 79.0 |
| MS.gene37127.t1 | MTR_1g069105 | 40.000 | 115 | 67 | 1 | 1 | 115 | 322 | 434 | 5.38e-17 | 78.6 |
| MS.gene37127.t1 | MTR_7g088830 | 37.931 | 116 | 68 | 2 | 1 | 114 | 791 | 904 | 5.41e-17 | 79.0 |
| MS.gene37127.t1 | MTR_7g088830 | 32.576 | 132 | 76 | 4 | 1 | 123 | 522 | 649 | 6.41e-11 | 61.2 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 270 | 362 | 9.06e-17 | 77.8 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 446 | 538 | 9.97e-17 | 77.8 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 352 | 444 | 1.03e-16 | 77.8 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 403 | 495 | 1.04e-16 | 77.8 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 420 | 512 | 1.21e-16 | 77.8 |
| MS.gene37127.t1 | MTR_7g088980 | 46.316 | 95 | 49 | 1 | 1 | 95 | 377 | 469 | 1.33e-16 | 77.4 |
| MS.gene37127.t1 | MTR_3g023900 | 48.276 | 87 | 45 | 0 | 10 | 96 | 382 | 468 | 1.37e-16 | 77.8 |
| MS.gene37127.t1 | MTR_7g099640 | 44.211 | 95 | 51 | 1 | 1 | 95 | 321 | 413 | 7.81e-16 | 75.1 |
| MS.gene37127.t1 | MTR_4g094270 | 34.074 | 135 | 75 | 2 | 1 | 129 | 291 | 417 | 1.34e-15 | 74.3 |
| MS.gene37127.t1 | MTR_3g023890 | 32.418 | 182 | 113 | 3 | 10 | 185 | 237 | 414 | 1.38e-14 | 71.6 |
| MS.gene37127.t1 | MTR_2g095210 | 35.965 | 114 | 63 | 2 | 1 | 114 | 540 | 643 | 1.53e-14 | 71.6 |
| MS.gene37127.t1 | MTR_7g088850 | 36.029 | 136 | 82 | 2 | 1 | 136 | 416 | 546 | 7.34e-14 | 69.7 |
| MS.gene37127.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 1.09e-11 | 63.5 |
| MS.gene37127.t1 | MTR_4g067100 | 39.048 | 105 | 63 | 1 | 1 | 105 | 516 | 619 | 1.09e-11 | 63.5 |
| MS.gene37127.t1 | MTR_3g092080 | 40.625 | 96 | 51 | 3 | 2 | 95 | 217 | 308 | 3.00e-11 | 62.0 |
| MS.gene37127.t1 | MTR_3g092080 | 40.625 | 96 | 51 | 3 | 2 | 95 | 217 | 308 | 3.44e-11 | 61.6 |
| MS.gene37127.t1 | MTR_3g062510 | 32.075 | 106 | 70 | 1 | 1 | 106 | 293 | 396 | 4.77e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37127.t1 | AT3G02450 | 74.839 | 155 | 39 | 0 | 1 | 155 | 461 | 615 | 1.01e-76 | 241 |
| MS.gene37127.t1 | AT5G58870 | 51.200 | 125 | 57 | 2 | 1 | 123 | 460 | 582 | 4.42e-31 | 119 |
| MS.gene37127.t1 | AT3G47060 | 50.400 | 125 | 58 | 2 | 1 | 123 | 456 | 578 | 2.63e-30 | 117 |
| MS.gene37127.t1 | AT5G15250 | 48.413 | 126 | 63 | 1 | 1 | 126 | 354 | 477 | 5.73e-29 | 113 |
| MS.gene37127.t1 | AT3G16290 | 41.667 | 132 | 75 | 1 | 1 | 132 | 540 | 669 | 2.19e-27 | 108 |
| MS.gene37127.t1 | AT1G50250 | 47.328 | 131 | 67 | 1 | 1 | 131 | 392 | 520 | 2.34e-27 | 108 |
| MS.gene37127.t1 | AT5G53170 | 45.802 | 131 | 69 | 1 | 1 | 131 | 488 | 616 | 2.76e-27 | 108 |
| MS.gene37127.t1 | AT5G42270 | 45.802 | 131 | 69 | 1 | 1 | 131 | 380 | 508 | 9.68e-27 | 107 |
| MS.gene37127.t1 | AT2G29080 | 41.085 | 129 | 76 | 0 | 1 | 129 | 452 | 580 | 1.27e-26 | 106 |
| MS.gene37127.t1 | AT1G07510 | 41.085 | 129 | 76 | 0 | 1 | 129 | 458 | 586 | 2.46e-26 | 105 |
| MS.gene37127.t1 | AT1G06430 | 39.130 | 184 | 106 | 4 | 1 | 181 | 350 | 530 | 2.49e-26 | 105 |
| MS.gene37127.t1 | AT1G06430 | 39.130 | 184 | 106 | 4 | 1 | 181 | 350 | 530 | 2.49e-26 | 105 |
| MS.gene37127.t1 | AT1G06430 | 39.130 | 184 | 106 | 4 | 1 | 181 | 350 | 530 | 2.49e-26 | 105 |
| MS.gene37127.t1 | AT2G30950 | 38.587 | 184 | 107 | 4 | 1 | 181 | 357 | 537 | 5.01e-26 | 104 |
| MS.gene37127.t1 | AT2G30950 | 38.587 | 184 | 107 | 4 | 1 | 181 | 357 | 537 | 5.01e-26 | 104 |
| MS.gene37127.t1 | AT2G30950 | 38.587 | 184 | 107 | 4 | 1 | 181 | 357 | 537 | 5.01e-26 | 104 |
| MS.gene37127.t1 | AT2G30950 | 38.587 | 184 | 107 | 4 | 1 | 181 | 361 | 541 | 5.17e-26 | 104 |
| MS.gene37127.t1 | AT2G26140 | 45.255 | 137 | 70 | 2 | 1 | 137 | 354 | 485 | 1.65e-25 | 103 |
| MS.gene37127.t1 | AT5G15250 | 40.940 | 149 | 63 | 2 | 1 | 126 | 354 | 500 | 1.65e-24 | 100 |
| MS.gene37127.t1 | AT5G64580 | 38.806 | 134 | 79 | 2 | 1 | 131 | 447 | 580 | 4.26e-22 | 93.6 |
| MS.gene37127.t1 | AT1G45000 | 38.346 | 133 | 78 | 2 | 1 | 133 | 270 | 398 | 2.16e-20 | 87.8 |
| MS.gene37127.t1 | AT5G43010 | 38.346 | 133 | 78 | 2 | 1 | 133 | 270 | 398 | 2.18e-20 | 87.8 |
| MS.gene37127.t1 | AT3G56690 | 47.312 | 93 | 47 | 1 | 1 | 93 | 854 | 944 | 3.20e-20 | 88.2 |
| MS.gene37127.t1 | AT3G56690 | 44.792 | 96 | 52 | 1 | 1 | 96 | 512 | 606 | 1.07e-16 | 78.2 |
| MS.gene37127.t1 | AT3G09840 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 6.19e-20 | 87.4 |
| MS.gene37127.t1 | AT3G09840 | 36.842 | 114 | 62 | 2 | 1 | 114 | 612 | 715 | 3.41e-15 | 73.6 |
| MS.gene37127.t1 | AT5G03340 | 43.810 | 105 | 57 | 1 | 1 | 105 | 335 | 437 | 7.15e-20 | 87.0 |
| MS.gene37127.t1 | AT5G03340 | 37.374 | 99 | 60 | 1 | 1 | 99 | 611 | 707 | 1.95e-14 | 71.6 |
| MS.gene37127.t1 | AT3G05530 | 43.636 | 110 | 60 | 1 | 1 | 110 | 302 | 409 | 8.52e-20 | 86.7 |
| MS.gene37127.t1 | AT4G23940 | 37.931 | 116 | 70 | 1 | 1 | 116 | 568 | 681 | 1.10e-19 | 86.7 |
| MS.gene37127.t1 | AT1G09100 | 43.636 | 110 | 60 | 1 | 1 | 110 | 301 | 408 | 1.56e-19 | 85.9 |
| MS.gene37127.t1 | AT1G53750 | 38.793 | 116 | 69 | 1 | 1 | 116 | 299 | 412 | 1.94e-19 | 85.5 |
| MS.gene37127.t1 | AT3G53230 | 41.905 | 105 | 59 | 1 | 1 | 105 | 336 | 438 | 3.55e-19 | 85.1 |
| MS.gene37127.t1 | AT3G53230 | 40.404 | 99 | 57 | 1 | 1 | 99 | 612 | 708 | 3.35e-16 | 76.6 |
| MS.gene37127.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 5.75e-19 | 84.7 |
| MS.gene37127.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 6.07e-19 | 84.7 |
| MS.gene37127.t1 | AT1G79560 | 37.500 | 112 | 68 | 1 | 1 | 112 | 627 | 736 | 7.19e-19 | 84.3 |
| MS.gene37127.t1 | AT4G29040 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 3.37e-18 | 82.0 |
| MS.gene37127.t1 | AT2G20140 | 41.739 | 115 | 65 | 1 | 1 | 115 | 319 | 431 | 6.45e-18 | 81.3 |
| MS.gene37127.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 470 | 583 | 5.43e-17 | 79.0 |
| MS.gene37127.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 5.49e-17 | 79.0 |
| MS.gene37127.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 471 | 584 | 5.49e-17 | 79.0 |
| MS.gene37127.t1 | AT1G53780 | 37.069 | 116 | 71 | 1 | 1 | 116 | 492 | 605 | 5.59e-17 | 79.0 |
| MS.gene37127.t1 | AT2G03670 | 45.263 | 95 | 50 | 1 | 1 | 95 | 418 | 510 | 3.51e-16 | 76.6 |
| MS.gene37127.t1 | AT2G03670 | 43.750 | 96 | 52 | 1 | 6 | 101 | 161 | 254 | 5.71e-15 | 72.8 |
| MS.gene37127.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 852 | 946 | 2.16e-15 | 74.3 |
| MS.gene37127.t1 | AT3G15120 | 40.625 | 96 | 56 | 1 | 1 | 96 | 862 | 956 | 2.18e-15 | 74.3 |
| MS.gene37127.t1 | AT2G03670 | 43.750 | 96 | 52 | 1 | 6 | 101 | 161 | 254 | 5.21e-15 | 72.8 |
| MS.gene37127.t1 | AT5G19990 | 33.333 | 135 | 76 | 2 | 1 | 129 | 235 | 361 | 1.18e-14 | 71.6 |
| MS.gene37127.t1 | AT5G19990 | 34.884 | 129 | 82 | 1 | 1 | 129 | 293 | 419 | 1.48e-14 | 71.6 |
| MS.gene37127.t1 | AT5G19990 | 34.884 | 129 | 82 | 1 | 1 | 129 | 293 | 419 | 1.48e-14 | 71.6 |
| MS.gene37127.t1 | AT5G20000 | 34.884 | 129 | 82 | 1 | 1 | 129 | 293 | 419 | 1.62e-14 | 71.2 |
| MS.gene37127.t1 | AT3G01610 | 40.909 | 132 | 64 | 5 | 10 | 138 | 380 | 500 | 1.32e-12 | 66.2 |
| MS.gene37127.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 4.24e-11 | 61.6 |
| MS.gene37127.t1 | AT3G01610 | 40.909 | 132 | 64 | 5 | 10 | 138 | 380 | 500 | 1.43e-12 | 65.9 |
| MS.gene37127.t1 | AT3G01610 | 34.545 | 110 | 68 | 3 | 1 | 108 | 656 | 763 | 4.11e-11 | 61.6 |
| MS.gene37127.t1 | AT1G05910 | 39.640 | 111 | 66 | 1 | 1 | 111 | 514 | 623 | 1.83e-12 | 65.9 |
| MS.gene37127.t1 | AT5G58290 | 33.019 | 106 | 69 | 1 | 1 | 106 | 286 | 389 | 1.93e-11 | 62.4 |
| MS.gene37127.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 972 | 1071 | 3.40e-11 | 62.0 |
| MS.gene37127.t1 | AT5G08470 | 39.048 | 105 | 59 | 2 | 1 | 105 | 963 | 1062 | 3.53e-11 | 62.0 |
Find 58 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTGAAAGAGCAAAATT+TGG | 0.224551 | 6.2:+12070644 | MS.gene37127:CDS |
| CGCTCTATCCACTGAGCTAC+AGG | 0.375810 | 6.2:+12071352 | MS.gene37127:CDS |
| GCATTTGAGAGGAGTTCCTT+TGG | 0.379597 | 6.2:+12069508 | MS.gene37127:CDS |
| TGTGGCAAGGGAAGATATAA+TGG | 0.388759 | 6.2:+12070619 | MS.gene37127:CDS |
| TTTCTCCTTCCTTCTTCGTC+AGG | 0.391335 | 6.2:-12069473 | None:intergenic |
| CCCTTGGATGCCATCATTGA+TGG | 0.392559 | 6.2:+12070724 | MS.gene37127:CDS |
| ATTGACGATGTTTGCAAGAT+CGG | 0.426563 | 6.2:-12069591 | None:intergenic |
| ACTGAGCTACAGGCGCTGTC+TGG | 0.459515 | 6.2:+12071362 | MS.gene37127:CDS |
| AGGGCTGGATCCAAGGCTTC+TGG | 0.459623 | 6.2:-12069407 | None:intergenic |
| CCCATCAATGATGGCATCCA+AGG | 0.469878 | 6.2:-12070725 | None:intergenic |
| CATTGATGGGAAGAAGTGAT+AGG | 0.477672 | 6.2:+12070738 | MS.gene37127:CDS |
| CGACCGGGACGACACAGGGC+TGG | 0.495070 | 6.2:-12069422 | None:intergenic |
| AGCTTGGTAAGCTGTTCCCT+TGG | 0.496185 | 6.2:+12070708 | MS.gene37127:CDS |
| GACATACAAGGACCACCATT+AGG | 0.504087 | 6.2:+12070770 | MS.gene37127:CDS |
| TCTCGAGGAAAGTATATGTA+GGG | 0.504433 | 6.2:+12069447 | MS.gene37127:CDS |
| ACGACACAGGGCTGGATCCA+AGG | 0.506054 | 6.2:-12069414 | None:intergenic |
| AAACCTACGACCTTCTGCTT+AGG | 0.510716 | 6.2:+12071322 | MS.gene37127:CDS |
| GAGAGGAGTTCCTTTGGAGG+AGG | 0.513124 | 6.2:+12069514 | MS.gene37127:CDS |
| AAACCTACGACCTTCTGCTT+AGG | 0.514295 | 6.2:+12071298 | MS.gene37127:CDS |
| GAATCAATGATAAGCAACTA+AGG | 0.515226 | 6.2:+12070666 | MS.gene37127:CDS |
| GCGCTGTCTGGTGAAGCTAC+AGG | 0.519670 | 6.2:+12071374 | MS.gene37127:CDS |
| CCTTGGATGCCATCATTGAT+GGG | 0.519963 | 6.2:+12070725 | MS.gene37127:CDS |
| AGAAACGACCGGGACGACAC+AGG | 0.521094 | 6.2:-12069427 | None:intergenic |
| GAAACGACCGGGACGACACA+GGG | 0.522419 | 6.2:-12069426 | None:intergenic |
| GATCCAGCCCTGTGTCGTCC+CGG | 0.528518 | 6.2:+12069419 | MS.gene37127:CDS |
| TCACTTCTTCCCATCAATGA+TGG | 0.540303 | 6.2:-12070734 | None:intergenic |
| TACTAACCGACCAGAAGCCT+TGG | 0.544542 | 6.2:+12069397 | MS.gene37127:CDS |
| TTAATTGCCACAGTTACTGA+TGG | 0.552662 | 6.2:+12069557 | MS.gene37127:CDS |
| TTTGAGAGGAGTTCCTTTGG+AGG | 0.552837 | 6.2:+12069511 | MS.gene37127:CDS |
| TTCTCGAGGAAAGTATATGT+AGG | 0.558873 | 6.2:+12069446 | MS.gene37127:CDS |
| TACTTTCCTCGAGAAACGAC+CGG | 0.560952 | 6.2:-12069438 | None:intergenic |
| ACTTTCCTCGAGAAACGACC+GGG | 0.571156 | 6.2:-12069437 | None:intergenic |
| ATATTAGCTGTGCATTTGAG+AGG | 0.572900 | 6.2:+12069497 | MS.gene37127:CDS |
| AGTAAAATAAGCAAGGAGCT+TGG | 0.574154 | 6.2:+12070692 | MS.gene37127:CDS |
| TTTCCTAAGCAGAAGGTCGT+AGG | 0.587678 | 6.2:-12071325 | None:intergenic |
| GTAGGGGAACCTGACGAAGA+AGG | 0.589232 | 6.2:+12069464 | MS.gene37127:CDS |
| TTTCCTAAGCAGAAGGTCGT+AGG | 0.592181 | 6.2:-12071301 | None:intergenic |
| AGGTAGTGAAACTGTGGCAA+GGG | 0.592368 | 6.2:+12070607 | MS.gene37127:intron |
| AAGGTCTAGTAAAATAAGCA+AGG | 0.598431 | 6.2:+12070685 | MS.gene37127:CDS |
| GTCGTCCCGGTCGTTTCTCG+AGG | 0.603735 | 6.2:+12069432 | MS.gene37127:CDS |
| AGGAAACAAGATGACATACA+AGG | 0.608187 | 6.2:+12070758 | MS.gene37127:CDS |
| GGGAACCTGACGAAGAAGGA+AGG | 0.608258 | 6.2:+12069468 | MS.gene37127:CDS |
| ATGTTAGCATCCTCCTCCAA+AGG | 0.613955 | 6.2:-12069524 | None:intergenic |
| CAGGTAGTGAAACTGTGGCA+AGG | 0.614725 | 6.2:+12070606 | MS.gene37127:intron |
| GCGTCTGTTTCCTAAGCAGA+AGG | 0.615393 | 6.2:-12071332 | None:intergenic |
| GCTTTGCTCGCTGCTCGAAG+AGG | 0.615478 | 6.2:+12069620 | MS.gene37127:CDS |
| CCATCAATGATGGCATCCAA+GGG | 0.617279 | 6.2:-12070724 | None:intergenic |
| ACAGTTACTGATGGTCTCGT+AGG | 0.621604 | 6.2:+12069566 | MS.gene37127:CDS |
| TTACATCAATGACTAATCAG+TGG | 0.629555 | 6.2:-12071403 | None:intergenic |
| CAATAATAATAACCTAATGG+TGG | 0.640587 | 6.2:-12070782 | None:intergenic |
| CTCGAGGAAAGTATATGTAG+GGG | 0.655243 | 6.2:+12069448 | MS.gene37127:CDS |
| CTGGATCCAAGGCTTCTGGT+CGG | 0.665200 | 6.2:-12069403 | None:intergenic |
| AGACAGCGCCTGTAGCTCAG+TGG | 0.665739 | 6.2:-12071360 | None:intergenic |
| CTCTGCAGGTAGTGAAACTG+TGG | 0.666734 | 6.2:+12070601 | MS.gene37127:intron |
| TACGAGACCATCAGTAACTG+TGG | 0.680129 | 6.2:-12069564 | None:intergenic |
| ATTTGAATCAGAAATGAGAG+TGG | 0.693418 | 6.2:+12069361 | MS.gene37127:CDS |
| TAGTTGCTGACAGAAATGGA+TGG | 0.707484 | 6.2:+12069338 | None:intergenic |
| TCTTCGAGCAGCGAGCAAAG+CGG | 0.723854 | 6.2:-12069618 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATCAATTTCTATAAAA+GGG | - | chr6.2:12070367-12070386 | None:intergenic | 10.0% |
| !!! | AAAAAACTAATTCATTTTAT+AGG | - | chr6.2:12070987-12071006 | None:intergenic | 10.0% |
| !! | AAAAATATCATTTAATGTGA+AGG | - | chr6.2:12070523-12070542 | None:intergenic | 15.0% |
| !! | ATTCAATAATAATAACCTAA+TGG | - | chr6.2:12070788-12070807 | None:intergenic | 15.0% |
| !! | CACTTAATTCTATATAAATT+AGG | + | chr6.2:12069763-12069782 | MS.gene37127:intron | 15.0% |
| !! | GTATAATCAATTTCTATAAA+AGG | - | chr6.2:12070368-12070387 | None:intergenic | 15.0% |
| !! | TTATTATTGAATTCATGAAT+TGG | + | chr6.2:12070796-12070815 | MS.gene37127:intron | 15.0% |
| !!! | ATTCTATATAAATTAGGTTT+TGG | + | chr6.2:12069769-12069788 | MS.gene37127:intron | 15.0% |
| !!! | GAATTAGTTTTTTTTGATTT+TGG | + | chr6.2:12070994-12071013 | MS.gene37127:intron | 15.0% |
| !! | AATTAAGTGTCACAAATATA+CGG | - | chr6.2:12069752-12069771 | None:intergenic | 20.0% |
| !! | TTATCACTTCAATATTTGAA+AGG | + | chr6.2:12071046-12071065 | MS.gene37127:intron | 20.0% |
| !!! | AAATATGCGAATTTCAATTT+TGG | - | chr6.2:12071158-12071177 | None:intergenic | 20.0% |
| !!! | ACTTTATCTTTTGTTATAAG+AGG | + | chr6.2:12070171-12070190 | MS.gene37127:intron | 20.0% |
| !!! | CTTTATCTTTTGTTATAAGA+GGG | + | chr6.2:12070172-12070191 | MS.gene37127:intron | 20.0% |
| !!! | TTTATCTTTTGTTATAAGAG+GGG | + | chr6.2:12070173-12070192 | MS.gene37127:intron | 20.0% |
| ! | AATAAGTGTGAACAATGAAA+AGG | - | chr6.2:12070854-12070873 | None:intergenic | 25.0% |
| ! | ACAAATATCACTAAATGGAA+GGG | - | chr6.2:12071084-12071103 | None:intergenic | 25.0% |
| ! | ATTGTACAAGTAAATTTGAC+AGG | - | chr6.2:12070826-12070845 | None:intergenic | 25.0% |
| ! | CAATAATAATAACCTAATGG+TGG | - | chr6.2:12070785-12070804 | None:intergenic | 25.0% |
| !! | AACAAAACTTTTTGCATACA+AGG | - | chr6.2:12070878-12070897 | None:intergenic | 25.0% |
| !! | TAAAATCAAAGAGTGTATGA+AGG | + | chr6.2:12069852-12069871 | MS.gene37127:intron | 25.0% |
| !! | TCTGAAGTAGTTATATCTAA+GGG | + | chr6.2:12069985-12070004 | MS.gene37127:intron | 25.0% |
| !!! | AAAAGCATTTATGCTATAAG+TGG | + | chr6.2:12070403-12070422 | MS.gene37127:intron | 25.0% |
| AAGGTCTAGTAAAATAAGCA+AGG | + | chr6.2:12070685-12070704 | MS.gene37127:CDS | 30.0% | |
| ATTCGCATATTTGTCAATAG+AGG | + | chr6.2:12071166-12071185 | MS.gene37127:intron | 30.0% | |
| ATTTGAATCAGAAATGAGAG+TGG | + | chr6.2:12069361-12069380 | MS.gene37127:CDS | 30.0% | |
| CATTCACCAATGATAATTCT+TGG | + | chr6.2:12069688-12069707 | MS.gene37127:intron | 30.0% | |
| GAATCAATGATAAGCAACTA+AGG | + | chr6.2:12070666-12070685 | MS.gene37127:CDS | 30.0% | |
| GACAAATATCACTAAATGGA+AGG | - | chr6.2:12071085-12071104 | None:intergenic | 30.0% | |
| GCTATTGAAAGAGCAAAATT+TGG | + | chr6.2:12070644-12070663 | MS.gene37127:CDS | 30.0% | |
| GGTTGACAAATATCACTAAA+TGG | - | chr6.2:12071089-12071108 | None:intergenic | 30.0% | |
| GTCTAACCAAGAATTATCAT+TGG | - | chr6.2:12069697-12069716 | None:intergenic | 30.0% | |
| TCATTTAATGTGAAGGTGAA+AGG | - | chr6.2:12070516-12070535 | None:intergenic | 30.0% | |
| !! | AGCTGATTTTATATGCTATC+TGG | + | chr6.2:12069897-12069916 | MS.gene37127:intron | 30.0% |
| !! | CTCTGAAGTAGTTATATCTA+AGG | + | chr6.2:12069984-12070003 | MS.gene37127:intron | 30.0% |
| !! | GCTGATTTTATATGCTATCT+GGG | + | chr6.2:12069898-12069917 | MS.gene37127:intron | 30.0% |
| AGGAAACAAGATGACATACA+AGG | + | chr6.2:12070758-12070777 | MS.gene37127:CDS | 35.0% | |
| AGTAAAATAAGCAAGGAGCT+TGG | + | chr6.2:12070692-12070711 | MS.gene37127:CDS | 35.0% | |
| ATACTCGTTAGACACATAAG+TGG | - | chr6.2:12071110-12071129 | None:intergenic | 35.0% | |
| ATATTAGCTGTGCATTTGAG+AGG | + | chr6.2:12069497-12069516 | MS.gene37127:CDS | 35.0% | |
| ATTGACGATGTTTGCAAGAT+CGG | - | chr6.2:12069594-12069613 | None:intergenic | 35.0% | |
| ATTTCTATAAAAGGGCAACC+CGG | - | chr6.2:12070359-12070378 | None:intergenic | 35.0% | |
| TATGCTATCTGGGAAACTTA+TGG | + | chr6.2:12069908-12069927 | MS.gene37127:intron | 35.0% | |
| TTAATTGCCACAGTTACTGA+TGG | + | chr6.2:12069557-12069576 | MS.gene37127:CDS | 35.0% | |
| ! | ACGTGTTTGAGTTAACTATG+TGG | + | chr6.2:12070021-12070040 | MS.gene37127:intron | 35.0% |
| ! | TCTCGAGGAAAGTATATGTA+GGG | + | chr6.2:12069447-12069466 | MS.gene37127:CDS | 35.0% |
| ! | TTCTCGAGGAAAGTATATGT+AGG | + | chr6.2:12069446-12069465 | MS.gene37127:CDS | 35.0% |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr6.2:12070261-12070280 | MS.gene37127:intron | 40.0% | |
| AATCCATATTTGCACTCTGC+AGG | + | chr6.2:12070587-12070606 | MS.gene37127:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr6.2:12070262-12070281 | MS.gene37127:intron | 40.0% | |
| CATTGATGGGAAGAAGTGAT+AGG | + | chr6.2:12070738-12070757 | MS.gene37127:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr6.2:12070293-12070312 | MS.gene37127:intron | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr6.2:12070267-12070286 | MS.gene37127:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr6.2:12070218-12070237 | MS.gene37127:intron | 40.0% | |
| TCACTTCTTCCCATCAATGA+TGG | - | chr6.2:12070737-12070756 | None:intergenic | 40.0% | |
| TGAAGGTGAAAGGTCAATGA+AGG | - | chr6.2:12070506-12070525 | None:intergenic | 40.0% | |
| TGTGGCAAGGGAAGATATAA+TGG | + | chr6.2:12070619-12070638 | MS.gene37127:CDS | 40.0% | |
| TGTTATAAGAGGGGTAACCT+TGG | + | chr6.2:12070182-12070201 | MS.gene37127:intron | 40.0% | |
| ! | CTCGAGGAAAGTATATGTAG+GGG | + | chr6.2:12069448-12069467 | MS.gene37127:CDS | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr6.2:12070269-12070288 | None:intergenic | 40.0% |
| AAACCTACGACCTTCTGCTT+AGG | + | chr6.2:12071298-12071317 | MS.gene37127:CDS | 45.0% | |
| AAGCAGTTGTGAGGCTACTT+TGG | + | chr6.2:12070047-12070066 | MS.gene37127:intron | 45.0% | |
| ACAGTTACTGATGGTCTCGT+AGG | + | chr6.2:12069566-12069585 | MS.gene37127:CDS | 45.0% | |
| ACTAAAGCTCCCGCATATGT+AGG | - | chr6.2:12070333-12070352 | None:intergenic | 45.0% | |
| AGGTAGTGAAACTGTGGCAA+GGG | + | chr6.2:12070607-12070626 | MS.gene37127:intron | 45.0% | |
| ATGTTAGCATCCTCCTCCAA+AGG | - | chr6.2:12069527-12069546 | None:intergenic | 45.0% | |
| CCATCAATGATGGCATCCAA+GGG | - | chr6.2:12070727-12070746 | None:intergenic | 45.0% | |
| CCTTGGATGCCATCATTGAT+GGG | + | chr6.2:12070725-12070744 | MS.gene37127:CDS | 45.0% | |
| CTAAAGCTCCCGCATATGTA+GGG | - | chr6.2:12070332-12070351 | None:intergenic | 45.0% | |
| CTACCTGCAGAGTGCAAATA+TGG | - | chr6.2:12070593-12070612 | None:intergenic | 45.0% | |
| GAAAGGTCAATGAAGGCAGA+GGG | - | chr6.2:12070499-12070518 | None:intergenic | 45.0% | |
| GACATACAAGGACCACCATT+AGG | + | chr6.2:12070770-12070789 | MS.gene37127:CDS | 45.0% | |
| GCATTTGAGAGGAGTTCCTT+TGG | + | chr6.2:12069508-12069527 | MS.gene37127:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr6.2:12070292-12070311 | MS.gene37127:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr6.2:12070289-12070308 | MS.gene37127:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr6.2:12070224-12070243 | MS.gene37127:intron | 45.0% | |
| TAAACATCTTCATACGCGCC+AGG | + | chr6.2:12071267-12071286 | MS.gene37127:intron | 45.0% | |
| TACGAGACCATCAGTAACTG+TGG | - | chr6.2:12069567-12069586 | None:intergenic | 45.0% | |
| TACTTTCCTCGAGAAACGAC+CGG | - | chr6.2:12069441-12069460 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr6.2:12070225-12070244 | MS.gene37127:intron | 45.0% | |
| TGAAAGGTCAATGAAGGCAG+AGG | - | chr6.2:12070500-12070519 | None:intergenic | 45.0% | |
| TTTCCTAAGCAGAAGGTCGT+AGG | - | chr6.2:12071304-12071323 | None:intergenic | 45.0% | |
| TTTCTCCTTCCTTCTTCGTC+AGG | - | chr6.2:12069476-12069495 | None:intergenic | 45.0% | |
| TTTGAGAGGAGTTCCTTTGG+AGG | + | chr6.2:12069511-12069530 | MS.gene37127:CDS | 45.0% | |
| ! | CGTAGGTTTTCCTAAGCAGA+AGG | - | chr6.2:12071311-12071330 | None:intergenic | 45.0% |
| ! | TGGTCAGCTAAGAGTGTATG+TGG | - | chr6.2:12070446-12070465 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr6.2:12070258-12070277 | None:intergenic | 45.0% |
| ACTTTCCTCGAGAAACGACC+GGG | - | chr6.2:12069440-12069459 | None:intergenic | 50.0% | |
| AGCTTGGTAAGCTGTTCCCT+TGG | + | chr6.2:12070708-12070727 | MS.gene37127:CDS | 50.0% | |
| ATCTTCATACGCGCCAGGTA+GGG | + | chr6.2:12071272-12071291 | MS.gene37127:intron | 50.0% | |
| ATGTGGCACAAGCAGTTGTG+AGG | + | chr6.2:12070038-12070057 | MS.gene37127:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr6.2:12070202-12070221 | None:intergenic | 50.0% | |
| CAGGTAGTGAAACTGTGGCA+AGG | + | chr6.2:12070606-12070625 | MS.gene37127:intron | 50.0% | |
| CCCATCAATGATGGCATCCA+AGG | - | chr6.2:12070728-12070747 | None:intergenic | 50.0% | |
| CCCTTGGATGCCATCATTGA+TGG | + | chr6.2:12070724-12070743 | MS.gene37127:CDS | 50.0% | |
| CTCTGCAGGTAGTGAAACTG+TGG | + | chr6.2:12070601-12070620 | MS.gene37127:intron | 50.0% | |
| GCGTCTGTTTCCTAAGCAGA+AGG | - | chr6.2:12071335-12071354 | None:intergenic | 50.0% | |
| TACTAACCGACCAGAAGCCT+TGG | + | chr6.2:12069397-12069416 | MS.gene37127:CDS | 50.0% | |
| !! | AAGCAGAAGGGGTGTCTGTA+GGG | - | chr6.2:12070476-12070495 | None:intergenic | 50.0% |
| AAGGCAGAGGGAAGCAGAAG+GGG | - | chr6.2:12070487-12070506 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr6.2:12070237-12070256 | MS.gene37127:intron | 55.0% | |
| CATATGTAGGGTCCGGGAAG+GGG | - | chr6.2:12070320-12070339 | None:intergenic | 55.0% | |
| CATCTTCATACGCGCCAGGT+AGG | + | chr6.2:12071271-12071290 | MS.gene37127:intron | 55.0% | |
| CGCTCTATCCACTGAGCTAC+AGG | + | chr6.2:12071352-12071371 | MS.gene37127:CDS | 55.0% | |
| CTGGATCCAAGGCTTCTGGT+CGG | - | chr6.2:12069406-12069425 | None:intergenic | 55.0% | |
| CTTCCCGGACCCTACATATG+CGG | + | chr6.2:12070320-12070339 | MS.gene37127:intron | 55.0% | |
| GAAGGCAGAGGGAAGCAGAA+GGG | - | chr6.2:12070488-12070507 | None:intergenic | 55.0% | |
| GCATATGTAGGGTCCGGGAA+GGG | - | chr6.2:12070321-12070340 | None:intergenic | 55.0% | |
| GGGAACCTGACGAAGAAGGA+AGG | + | chr6.2:12069468-12069487 | MS.gene37127:CDS | 55.0% | |
| GGTGTCTGTAGGGAGGCTAA+TGG | - | chr6.2:12070466-12070485 | None:intergenic | 55.0% | |
| GTAGGGGAACCTGACGAAGA+AGG | + | chr6.2:12069464-12069483 | MS.gene37127:CDS | 55.0% | |
| TCGTAGGTTTGACCCCTACC+TGG | - | chr6.2:12071288-12071307 | None:intergenic | 55.0% | |
| TCTTCATACGCGCCAGGTAG+GGG | + | chr6.2:12071273-12071292 | MS.gene37127:intron | 55.0% | |
| TCTTCGAGCAGCGAGCAAAG+CGG | - | chr6.2:12069621-12069640 | None:intergenic | 55.0% | |
| TGAAGGCAGAGGGAAGCAGA+AGG | - | chr6.2:12070489-12070508 | None:intergenic | 55.0% | |
| TTCCCGGACCCTACATATGC+GGG | + | chr6.2:12070321-12070340 | MS.gene37127:intron | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr6.2:12070337-12070356 | MS.gene37127:intron | 55.0% |
| ! | GAGAGGAGTTCCTTTGGAGG+AGG | + | chr6.2:12069514-12069533 | MS.gene37127:CDS | 55.0% |
| !! | GAAGCAGAAGGGGTGTCTGT+AGG | - | chr6.2:12070477-12070496 | None:intergenic | 55.0% |
| ACGACACAGGGCTGGATCCA+AGG | - | chr6.2:12069417-12069436 | None:intergenic | 60.0% | |
| AGAAACGACCGGGACGACAC+AGG | - | chr6.2:12069430-12069449 | None:intergenic | 60.0% | |
| AGACAGCGCCTGTAGCTCAG+TGG | - | chr6.2:12071363-12071382 | None:intergenic | 60.0% | |
| AGGGCTGGATCCAAGGCTTC+TGG | - | chr6.2:12069410-12069429 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr6.2:12070191-12070210 | MS.gene37127:intron | 60.0% | |
| CGCATATGTAGGGTCCGGGA+AGG | - | chr6.2:12070322-12070341 | None:intergenic | 60.0% | |
| CTCCCGCATATGTAGGGTCC+GGG | - | chr6.2:12070326-12070345 | None:intergenic | 60.0% | |
| GAAACGACCGGGACGACACA+GGG | - | chr6.2:12069429-12069448 | None:intergenic | 60.0% | |
| GCGCTGTCTGGTGAAGCTAC+AGG | + | chr6.2:12071374-12071393 | MS.gene37127:CDS | 60.0% | |
| GCTCCCGCATATGTAGGGTC+CGG | - | chr6.2:12070327-12070346 | None:intergenic | 60.0% | |
| GCTTTGCTCGCTGCTCGAAG+AGG | + | chr6.2:12069620-12069639 | MS.gene37127:CDS | 60.0% | |
| ! | ACTGAGCTACAGGCGCTGTC+TGG | + | chr6.2:12071362-12071381 | MS.gene37127:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr6.2:12070305-12070324 | MS.gene37127:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr6.2:12070338-12070357 | MS.gene37127:intron | 60.0% |
| !! | CAGAAGGGGTGTCTGTAGGG+AGG | - | chr6.2:12070473-12070492 | None:intergenic | 60.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr6.2:12070307-12070326 | None:intergenic | 65.0% | |
| GATCCAGCCCTGTGTCGTCC+CGG | + | chr6.2:12069419-12069438 | MS.gene37127:CDS | 65.0% | |
| GTCGTCCCGGTCGTTTCTCG+AGG | + | chr6.2:12069432-12069451 | MS.gene37127:CDS | 65.0% | |
| CGACCGGGACGACACAGGGC+TGG | - | chr6.2:12069425-12069444 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 12069353 | 12071413 | 12069353 | ID=MS.gene37127 |
| chr6.2 | mRNA | 12069353 | 12071413 | 12069353 | ID=MS.gene37127.t1;Parent=MS.gene37127 |
| chr6.2 | exon | 12069353 | 12069641 | 12069353 | ID=MS.gene37127.t1.exon1;Parent=MS.gene37127.t1 |
| chr6.2 | CDS | 12069353 | 12069641 | 12069353 | ID=cds.MS.gene37127.t1;Parent=MS.gene37127.t1 |
| chr6.2 | exon | 12070609 | 12070791 | 12070609 | ID=MS.gene37127.t1.exon2;Parent=MS.gene37127.t1 |
| chr6.2 | CDS | 12070609 | 12070791 | 12070609 | ID=cds.MS.gene37127.t1;Parent=MS.gene37127.t1 |
| chr6.2 | exon | 12071289 | 12071413 | 12071289 | ID=MS.gene37127.t1.exon3;Parent=MS.gene37127.t1 |
| chr6.2 | CDS | 12071289 | 12071413 | 12071289 | ID=cds.MS.gene37127.t1;Parent=MS.gene37127.t1 |
| Gene Sequence |
| Protein sequence |
