AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40086

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40086.t1 MTR_4g092920 98.815 675 8 0 1 675 1 675 0.0 1352
MS.gene40086.t1 MTR_2g010020 90.342 673 63 2 3 675 6 676 0.0 1216
MS.gene40086.t1 MTR_2g010020 90.208 674 63 3 3 675 6 677 0.0 1211
MS.gene40086.t1 MTR_4g092920 98.706 541 7 0 135 675 1 541 0.0 1079
MS.gene40086.t1 MTR_2g005690 54.743 643 286 3 27 666 45 685 0.0 696
MS.gene40086.t1 MTR_8g099945 53.448 580 244 10 53 614 38 609 0.0 581
MS.gene40086.t1 MTR_8g099795 53.448 580 244 10 53 614 38 609 0.0 579
MS.gene40086.t1 MTR_4g063710 49.298 641 283 12 54 659 10 643 0.0 570
MS.gene40086.t1 MTR_4g063720 52.422 578 249 9 54 612 10 580 0.0 568
MS.gene40086.t1 MTR_7g024580 49.383 648 291 11 54 673 10 648 0.0 567
MS.gene40086.t1 MTR_7g099680 49.373 638 287 11 54 662 10 640 0.0 567
MS.gene40086.t1 MTR_7g024390 52.249 578 250 9 54 612 10 580 0.0 567
MS.gene40086.t1 MTR_4g130540 50.081 621 281 10 54 652 9 622 0.0 567
MS.gene40086.t1 MTR_2g017730 45.183 602 293 13 51 630 6 592 2.26e-163 483
MS.gene40086.t1 MTR_7g025770 46.769 588 285 13 46 613 2 581 4.21e-162 480
MS.gene40086.t1 MTR_7g451380 46.299 581 281 12 54 612 10 581 5.28e-161 477
MS.gene40086.t1 MTR_7g026090 44.020 602 305 11 54 629 10 605 8.26e-161 476
MS.gene40086.t1 MTR_7g025760 45.552 562 276 10 54 595 10 561 2.73e-160 475
MS.gene40086.t1 MTR_2g038260 44.828 580 292 12 54 613 10 581 8.87e-159 471
MS.gene40086.t1 MTR_7g021440 45.675 578 290 11 54 613 10 581 2.81e-157 468
MS.gene40086.t1 MTR_8g032650 46.057 558 278 11 54 595 10 560 1.03e-156 466
MS.gene40086.t1 MTR_7g026170 45.189 582 287 14 54 613 10 581 2.76e-156 465
MS.gene40086.t1 MTR_7g026030 45.161 558 283 11 54 595 10 560 5.86e-156 464
MS.gene40086.t1 MTR_6g033760 44.345 557 289 9 54 595 10 560 7.18e-156 464
MS.gene40086.t1 MTR_4g079590 45.876 582 283 14 54 613 10 581 3.87e-155 462
MS.gene40086.t1 MTR_2g032550 44.538 595 294 13 54 626 11 591 6.12e-154 459
MS.gene40086.t1 MTR_7g025620 43.486 591 309 12 54 626 10 593 7.78e-154 459
MS.gene40086.t1 MTR_5g066800 42.810 612 292 14 54 634 10 594 3.84e-153 457
MS.gene40086.t1 MTR_7g025790 44.624 558 286 10 54 595 10 560 9.09e-152 453
MS.gene40086.t1 MTR_7g029415 46.359 563 269 15 52 593 15 565 1.28e-151 453
MS.gene40086.t1 MTR_7g025720 45.144 556 282 10 54 593 10 558 5.72e-151 451
MS.gene40086.t1 MTR_7g025820 44.821 560 283 10 54 595 10 561 1.29e-150 450
MS.gene40086.t1 MTR_7g011590 45.946 555 267 13 54 593 10 546 9.12e-150 447
MS.gene40086.t1 MTR_7g025740 44.092 567 285 13 54 595 10 569 4.19e-149 447
MS.gene40086.t1 MTR_7g024030 45.161 558 283 11 54 595 10 560 4.68e-149 446
MS.gene40086.t1 MTR_2g022050 45.455 583 279 12 54 606 10 583 4.98e-149 446
MS.gene40086.t1 MTR_7g026110 43.067 613 320 15 54 647 10 612 1.08e-148 445
MS.gene40086.t1 MTR_6g033850 43.627 557 293 9 54 595 10 560 3.26e-148 446
MS.gene40086.t1 MTR_2g437440 42.761 594 288 13 54 626 10 572 1.03e-147 442
MS.gene40086.t1 MTR_7g078190 43.929 560 289 12 54 595 10 562 1.57e-145 437
MS.gene40086.t1 MTR_7g025630 43.063 555 285 12 54 595 10 546 6.43e-144 432
MS.gene40086.t1 MTR_7g074460 43.885 556 272 11 54 593 10 541 1.41e-143 431
MS.gene40086.t1 MTR_2g038270 42.785 596 306 15 46 613 2 590 2.23e-142 429
MS.gene40086.t1 MTR_7g026130 46.857 525 244 13 40 544 1 510 5.21e-142 431
MS.gene40086.t1 MTR_6g033820 40.925 562 306 9 54 595 10 565 1.09e-141 429
MS.gene40086.t1 MTR_6g033955 41.459 562 303 9 54 595 10 565 1.32e-141 428
MS.gene40086.t1 MTR_6g033870 41.509 583 310 12 54 612 11 586 3.11e-141 428
MS.gene40086.t1 MTR_4g027145 41.990 593 302 15 54 613 10 593 1.64e-140 425
MS.gene40086.t1 MTR_8g103930 40.659 637 319 19 40 645 1 609 6.35e-139 420
MS.gene40086.t1 MTR_2g032580 41.696 578 283 10 54 613 10 551 9.58e-139 419
MS.gene40086.t1 MTR_7g078210 43.828 559 290 12 54 595 10 561 1.48e-138 419
MS.gene40086.t1 MTR_1g017130 41.897 580 269 16 54 613 10 541 2.01e-137 416
MS.gene40086.t1 MTR_7g026140 43.672 561 268 17 54 593 10 543 3.64e-137 416
MS.gene40086.t1 MTR_7g025260 44.338 521 269 9 91 595 18 533 2.23e-135 410
MS.gene40086.t1 MTR_7g451360 42.626 556 239 14 54 593 10 501 3.41e-130 396
MS.gene40086.t1 MTR_7g035155 40.587 579 264 16 54 613 10 527 5.53e-123 377
MS.gene40086.t1 MTR_7g007000 40.860 558 261 14 54 593 10 516 9.27e-120 370
MS.gene40086.t1 MTR_6g033800 42.405 474 255 8 135 595 1 469 1.10e-118 367
MS.gene40086.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.70e-104 350
MS.gene40086.t1 MTR_2g040370 47.475 396 188 8 54 436 1414 1802 1.92e-94 320
MS.gene40086.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.94e-104 349
MS.gene40086.t1 MTR_2g040370 47.792 385 183 7 54 427 1414 1791 8.52e-95 322
MS.gene40086.t1 MTR_2g040160 46.770 387 189 6 54 430 1110 1489 1.58e-102 342
MS.gene40086.t1 MTR_2g040260 46.753 385 192 5 54 430 1039 1418 1.59e-101 340
MS.gene40086.t1 MTR_2g032160 45.576 373 182 7 54 412 10 375 2.81e-100 315
MS.gene40086.t1 MTR_1g041565 37.651 579 268 18 52 613 4 506 1.59e-98 313
MS.gene40086.t1 MTR_2g040350 43.439 442 212 12 10 430 780 1204 1.96e-96 323
MS.gene40086.t1 MTR_2g040350 43.439 442 212 12 10 430 998 1422 6.96e-96 323
MS.gene40086.t1 MTR_2g040220 45.407 381 187 7 54 420 1019 1392 8.20e-91 310
MS.gene40086.t1 MTR_2g040220 47.475 99 44 1 481 571 1397 1495 8.14e-18 89.0
MS.gene40086.t1 MTR_6g034005 36.266 466 272 10 125 577 2 455 5.61e-88 290
MS.gene40086.t1 MTR_1g077230 50.365 274 124 4 54 316 10 282 1.72e-85 270
MS.gene40086.t1 MTR_4g063720 45.029 342 164 7 342 659 231 572 2.58e-83 274
MS.gene40086.t1 MTR_4g063720 55.556 216 86 3 54 260 10 224 1.94e-69 237
MS.gene40086.t1 MTR_7g026080 51.220 246 108 5 46 280 2 246 2.03e-72 235
MS.gene40086.t1 MTR_3g051300 33.990 406 251 6 53 446 3 403 1.51e-67 236
MS.gene40086.t1 MTR_4g012050 32.598 408 258 5 53 448 3 405 4.85e-66 233
MS.gene40086.t1 MTR_2g102180 31.683 404 259 6 53 444 3 401 4.03e-63 225
MS.gene40086.t1 MTR_5g006180 28.860 544 303 13 29 529 5 507 8.16e-63 219
MS.gene40086.t1 MTR_5g092570 31.640 433 270 7 53 466 3 428 3.86e-62 221
MS.gene40086.t1 MTR_4g088515 34.945 455 201 13 27 471 250 619 6.77e-62 218
MS.gene40086.t1 MTR_6g033855 35.673 342 134 4 156 494 39 297 1.45e-59 203
MS.gene40086.t1 MTR_2g031670 46.781 233 110 4 65 284 45 276 3.94e-59 202
MS.gene40086.t1 MTR_6g033810 38.333 300 133 5 156 450 39 291 1.90e-53 186
MS.gene40086.t1 MTR_7g026050 37.101 345 173 9 279 613 1 311 8.98e-53 186
MS.gene40086.t1 MTR_1207s0010 51.807 166 76 1 156 317 10 175 2.99e-51 176
MS.gene40086.t1 MTR_4g107920 29.771 524 316 15 38 531 5 506 2.48e-50 184
MS.gene40086.t1 MTR_4g115780 30.361 527 324 12 48 540 135 652 4.77e-48 180
MS.gene40086.t1 MTR_5g090110 27.586 493 293 12 54 517 29 486 3.70e-47 175
MS.gene40086.t1 MTR_1g077240 43.600 250 124 7 365 602 6 250 1.14e-42 156
MS.gene40086.t1 MTR_5g097190 38.333 240 99 6 54 287 159 355 3.21e-42 157
MS.gene40086.t1 MTR_6g478100 38.498 213 107 4 80 283 10 207 3.38e-40 150
MS.gene40086.t1 MTR_3g081170 29.017 417 263 11 40 430 15 424 5.83e-38 151
MS.gene40086.t1 MTR_7g026180 50.427 117 54 1 121 233 23 139 2.03e-32 128
MS.gene40086.t1 MTR_5g005870 31.381 239 159 5 339 573 71 308 2.90e-31 127
MS.gene40086.t1 MTR_6g033910 34.742 213 89 4 107 313 9 177 2.99e-31 120
MS.gene40086.t1 MTR_7g074540 46.099 141 74 2 454 593 4 143 9.03e-31 120
MS.gene40086.t1 MTR_7g451390 44.099 161 77 6 471 626 10 162 2.32e-26 107
MS.gene40086.t1 MTR_2g017710 32.950 261 83 8 261 515 19 193 4.20e-23 100
MS.gene40086.t1 MTR_1g116250 33.913 230 106 8 402 626 73 261 1.31e-21 96.3
MS.gene40086.t1 MTR_1g068900 41.429 140 73 5 461 595 23 158 6.70e-20 87.8
MS.gene40086.t1 MTR_4g115860 45.652 92 50 0 432 523 30 121 5.30e-19 84.0
MS.gene40086.t1 MTR_5g005890 29.493 217 95 6 119 326 7 174 1.36e-18 84.7
MS.gene40086.t1 MTR_2g040355 31.492 181 79 3 401 580 92 228 4.55e-14 73.9
MS.gene40086.t1 MTR_6g033805 50.000 64 31 1 54 117 10 72 1.41e-13 66.6
MS.gene40086.t1 MTR_4g027235 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene40086.t1 MTR_4g027085 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene40086.t1 MTR_2g040375 60.000 55 22 0 433 487 51 105 2.74e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40086.t1 AT5G09590 83.505 679 107 2 2 675 4 682 0.0 1142
MS.gene40086.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene40086.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene40086.t1 AT4G24280 57.877 603 247 4 47 645 74 673 0.0 693
MS.gene40086.t1 AT5G49910 56.774 620 261 4 47 663 74 689 0.0 692
MS.gene40086.t1 AT5G42020 54.301 558 232 9 53 595 37 586 0.0 582
MS.gene40086.t1 AT5G42020 54.301 558 232 9 53 595 42 591 0.0 581
MS.gene40086.t1 AT5G28540 54.301 558 232 9 53 595 37 586 0.0 579
MS.gene40086.t1 AT5G02500 51.171 598 267 10 54 631 10 602 0.0 569
MS.gene40086.t1 AT3G12580 49.525 632 283 12 54 661 10 629 0.0 566
MS.gene40086.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene40086.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene40086.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene40086.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene40086.t1 AT1G16030 48.896 634 288 11 54 663 9 630 0.0 562
MS.gene40086.t1 AT1G56410 49.431 615 284 10 54 648 10 617 0.0 560
MS.gene40086.t1 AT5G02490 48.860 614 285 10 54 643 10 618 0.0 560
MS.gene40086.t1 AT1G09080 52.900 569 245 10 53 607 42 601 0.0 555
MS.gene40086.t1 AT1G09080 52.900 569 245 10 53 607 52 611 0.0 555
MS.gene40086.t1 AT5G42020 55.967 486 191 9 53 523 37 514 4.08e-177 518
MS.gene40086.t1 AT5G02500 50.895 391 177 6 54 434 10 395 3.34e-124 379
MS.gene40086.t1 AT1G79930 32.274 409 260 5 53 449 3 406 5.77e-67 235
MS.gene40086.t1 AT1G79930 32.274 409 260 5 53 449 3 406 8.39e-67 235
MS.gene40086.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene40086.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene40086.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene40086.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.28e-66 233
MS.gene40086.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene40086.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene40086.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene40086.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene40086.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene40086.t1 AT1G11660 31.467 375 239 5 88 449 1 370 9.31e-55 200
MS.gene40086.t1 AT4G16660 27.571 457 291 11 48 469 21 472 1.98e-42 165
MS.gene40086.t1 AT4G16660 27.571 457 291 11 48 469 45 496 2.23e-42 165
MS.gene40086.t1 AT4G32208 69.444 108 32 1 569 675 46 153 1.33e-35 132

Find 177 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4.3:+21238625 MS.gene40086:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4.3:-21238802 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4.3:+21238467 MS.gene40086:CDS
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4.3:-21239275 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4.3:+21239859 MS.gene40086:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4.3:-21238942 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4.3:-21238743 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4.3:-21239702 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4.3:-21239012 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4.3:+21238453 MS.gene40086:CDS
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4.3:-21240001 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4.3:-21239785 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4.3:+21239649 MS.gene40086:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4.3:+21241023 MS.gene40086:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4.3:+21238595 MS.gene40086:CDS
TACCAATGGTGACACTTTCT+TGG 0.320696 4.3:+21239406 MS.gene40086:CDS
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4.3:+21241022 MS.gene40086:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4.3:+21239190 MS.gene40086:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4.3:-21240777 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4.3:+21239937 MS.gene40086:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4.3:+21240742 MS.gene40086:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4.3:+21240906 MS.gene40086:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4.3:+21239136 MS.gene40086:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4.3:+21241210 MS.gene40086:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4.3:+21239797 MS.gene40086:CDS
CAGTATTCTCCCAGCCAAAT+TGG 0.369640 4.3:+21238998 MS.gene40086:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4.3:+21238916 MS.gene40086:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4.3:+21238596 MS.gene40086:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4.3:+21241224 MS.gene40086:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4.3:+21238584 MS.gene40086:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4.3:-21238941 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4.3:+21239938 MS.gene40086:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4.3:-21239679 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4.3:-21238795 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4.3:-21238624 None:intergenic
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4.3:-21241249 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4.3:-21239984 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4.3:-21240705 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4.3:+21240874 MS.gene40086:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4.3:-21239919 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4.3:-21237790 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4.3:+21239922 MS.gene40086:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4.3:+21239407 MS.gene40086:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4.3:-21240778 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4.3:+21240702 MS.gene40086:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4.3:-21239845 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4.3:+21238872 MS.gene40086:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4.3:+21238876 MS.gene40086:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4.3:-21239008 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4.3:+21241156 MS.gene40086:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4.3:+21237820 MS.gene40086:CDS
TTCATCACTGCTGATGCATC+CGG 0.456355 4.3:+21239599 MS.gene40086:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4.3:-21238963 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4.3:-21238962 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4.3:-21238879 None:intergenic
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4.3:-21241054 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4.3:+21238803 MS.gene40086:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4.3:+21239643 MS.gene40086:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4.3:-21239726 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4.3:+21238823 MS.gene40086:CDS
ATGAGGTTCTTCTCGTCGGT+GGG 0.484269 4.3:+21239750 MS.gene40086:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4.3:+21239285 MS.gene40086:CDS
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4.3:+21241198 MS.gene40086:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4.3:-21239932 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4.3:+21238569 MS.gene40086:intron
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4.3:+21239191 MS.gene40086:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4.3:+21239860 MS.gene40086:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4.3:-21238830 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4.3:+21239108 MS.gene40086:CDS
AGATGCCAACATATCTATCA+AGG 0.510131 4.3:+21239721 MS.gene40086:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4.3:+21238904 MS.gene40086:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4.3:-21240772 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4.3:+21239997 MS.gene40086:CDS
AAGATTGGTCAGCATATGTC+AGG 0.517534 4.3:+21241171 MS.gene40086:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4.3:-21239100 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4.3:+21239669 MS.gene40086:CDS
GAGAGCACGGCGCAAGACGG+CGG 0.518714 4.3:-21237777 None:intergenic
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4.3:+21238634 MS.gene40086:CDS
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4.3:-21239827 None:intergenic
GCGGAGAGCACGGCGCAAGA+CGG 0.519906 4.3:-21237780 None:intergenic
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4.3:+21238629 MS.gene40086:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4.3:+21240724 MS.gene40086:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4.3:+21238628 MS.gene40086:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4.3:+21240678 MS.gene40086:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4.3:+21239046 MS.gene40086:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4.3:+21238443 MS.gene40086:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4.3:+21239844 MS.gene40086:CDS
GATGAGGTTCTTCTCGTCGG+TGG 0.529703 4.3:+21239749 MS.gene40086:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4.3:+21240942 MS.gene40086:CDS
GATTTGAGAACGGCTATAGC+AGG 0.533055 4.3:+21241093 MS.gene40086:CDS
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4.3:+21239775 MS.gene40086:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4.3:-21239985 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4.3:+21239845 MS.gene40086:CDS
GTTGATGAGGTTCTTCTCGT+CGG 0.537044 4.3:+21239746 MS.gene40086:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4.3:+21239208 MS.gene40086:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4.3:+21240689 MS.gene40086:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4.3:+21239923 MS.gene40086:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4.3:-21240769 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4.3:+21238746 MS.gene40086:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4.3:+21239941 MS.gene40086:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4.3:-21239155 None:intergenic
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4.3:-21238834 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4.3:+21238958 MS.gene40086:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4.3:+21241216 MS.gene40086:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4.3:+21238753 MS.gene40086:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4.3:-21241228 None:intergenic
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4.3:+21238444 MS.gene40086:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4.3:+21241183 MS.gene40086:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4.3:-21239701 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4.3:+21240841 MS.gene40086:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4.3:+21240688 MS.gene40086:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4.3:-21239618 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4.3:+21240763 MS.gene40086:CDS
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4.3:-21240776 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4.3:-21239188 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4.3:+21238957 MS.gene40086:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4.3:+21239507 MS.gene40086:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4.3:-21238481 None:intergenic
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4.3:+21239124 MS.gene40086:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4.3:-21239408 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4.3:+21241050 MS.gene40086:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4.3:-21240998 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4.3:+21241233 MS.gene40086:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4.3:-21238782 None:intergenic
AATGGTGACACTTTCTTGGG+AGG 0.584699 4.3:+21239410 MS.gene40086:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4.3:-21239592 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4.3:-21239007 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4.3:+21239733 MS.gene40086:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4.3:+21239781 MS.gene40086:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4.3:+21238788 MS.gene40086:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4.3:-21239596 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4.3:-21237819 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4.3:+21238769 MS.gene40086:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4.3:-21239187 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4.3:+21238947 MS.gene40086:CDS
CACCCAAAGTCTCAATACCC+AGG 0.604506 4.3:-21239940 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4.3:-21241211 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4.3:-21238584 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4.3:-21240756 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4.3:+21241065 MS.gene40086:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4.3:+21241174 MS.gene40086:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4.3:-21240821 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4.3:-21237831 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4.3:-21240881 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4.3:+21239392 MS.gene40086:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4.3:+21241201 MS.gene40086:CDS
AGCTGACAATCAGACTCAAG+TGG 0.624033 4.3:+21240669 MS.gene40086:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4.3:+21241186 MS.gene40086:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4.3:-21241163 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4.3:-21239939 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4.3:-21240885 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4.3:+21241041 MS.gene40086:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4.3:+21240877 MS.gene40086:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4.3:-21237802 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4.3:+21239487 MS.gene40086:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4.3:+21241213 MS.gene40086:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4.3:+21241248 MS.gene40086:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4.3:+21241175 MS.gene40086:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4.3:+21240670 MS.gene40086:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4.3:+21239036 MS.gene40086:CDS
TCAAAAGTGACTTCAATCTG+AGG 0.643584 4.3:-21240790 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4.3:+21238597 MS.gene40086:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4.3:+21240947 MS.gene40086:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4.3:+21239832 MS.gene40086:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4.3:+21241083 MS.gene40086:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4.3:+21239815 MS.gene40086:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4.3:+21239676 MS.gene40086:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4.3:+21238937 MS.gene40086:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4.3:+21239778 MS.gene40086:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4.3:+21239207 MS.gene40086:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4.3:+21239875 MS.gene40086:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4.3:+21239209 MS.gene40086:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4.3:-21237799 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4.3:+21240690 MS.gene40086:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4.3:+21239104 MS.gene40086:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4.3:+21239863 MS.gene40086:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4.3:-21239892 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATGAAAAATTAGAC+TGG - chr4.3:21238259-21238278 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG + chr4.3:21240906-21240925 MS.gene40086:CDS 15.0%
!! ATTTAAAAATAAAATCTGCT+TGG + chr4.3:21240284-21240303 MS.gene40086:intron 15.0%
!! TACATTAAATAAATCTGAAT+AGG - chr4.3:21240566-21240585 None:intergenic 15.0%
!!! TGTTGTTTTATTCAATAAAA+AGG + chr4.3:21240386-21240405 MS.gene40086:intron 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG - chr4.3:21240264-21240283 None:intergenic 15.0%
!! AATAATAACTGTTGATATCA+TGG + chr4.3:21238303-21238322 MS.gene40086:intron 20.0%
!! ACATAATTATTCCTAATGAT+AGG - chr4.3:21239350-21239369 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG + chr4.3:21239353-21239372 MS.gene40086:intron 20.0%
!! TCAGATTTATTTAATGTAAC+AGG + chr4.3:21240568-21240587 MS.gene40086:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG + chr4.3:21240633-21240652 MS.gene40086:intron 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG + chr4.3:21239274-21239293 MS.gene40086:CDS 20.0%
! AAACCAAAATAAAACCAAAC+AGG - chr4.3:21240212-21240231 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG + chr4.3:21238746-21238765 MS.gene40086:CDS 25.0%
! ATCTTTCTTAACCTATCATT+AGG + chr4.3:21239336-21239355 MS.gene40086:intron 25.0%
! CAATAAAAAGGAAATCAAAC+AGG + chr4.3:21240398-21240417 MS.gene40086:intron 25.0%
! CAATTCATGTGTTTCTTTAA+TGG + chr4.3:21238625-21238644 MS.gene40086:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG - chr4.3:21238627-21238646 None:intergenic 25.0%
! GAAAACAAAAGAGAAATCTA+GGG - chr4.3:21240424-21240443 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG - chr4.3:21239337-21239356 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG - chr4.3:21238746-21238765 None:intergenic 25.0%
! TGATGTTATTGGAATTGATT+TGG + chr4.3:21238595-21238614 MS.gene40086:CDS 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG - chr4.3:21239278-21239297 None:intergenic 25.0%
!! GATGTTATTGGAATTGATTT+GGG + chr4.3:21238596-21238615 MS.gene40086:CDS 25.0%
!! TCACTGATAACATATTTTTC+AGG + chr4.3:21239376-21239395 MS.gene40086:intron 25.0%
!! TCTTCAATGTTTTATGAGTT+AGG + chr4.3:21237899-21237918 MS.gene40086:intron 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG + chr4.3:21239024-21239043 MS.gene40086:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG + chr4.3:21240064-21240083 MS.gene40086:intron 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG + chr4.3:21239436-21239455 MS.gene40086:CDS 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG - chr4.3:21240144-21240163 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG - chr4.3:21238734-21238753 None:intergenic 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG + chr4.3:21238597-21238616 MS.gene40086:CDS 25.0%
!!! ATTACTTTTGGACATGTTTT+TGG + chr4.3:21238676-21238695 MS.gene40086:intron 25.0%
!!! CTATTTCTCTTGATTACTTT+TGG + chr4.3:21238664-21238683 MS.gene40086:intron 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG - chr4.3:21239066-21239085 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG + chr4.3:21240482-21240501 MS.gene40086:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG - chr4.3:21238733-21238752 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG - chr4.3:21240148-21240167 None:intergenic 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG + chr4.3:21240494-21240513 MS.gene40086:intron 25.0%
!!! TTTTTTTGTTACCGATCATT+GGG + chr4.3:21238151-21238170 MS.gene40086:intron 25.0%
!!! TTTTTTTTGTTACCGATCAT+TGG + chr4.3:21238150-21238169 MS.gene40086:intron 25.0%
AACACAAAAGGAGATGAAAA+TGG + chr4.3:21238916-21238935 MS.gene40086:CDS 30.0%
AACATCCTTGATAGATATGT+TGG - chr4.3:21239729-21239748 None:intergenic 30.0%
AATATACATGACCCAATGAT+CGG - chr4.3:21238165-21238184 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG + chr4.3:21239285-21239304 MS.gene40086:CDS 30.0%
ATTGGGTCATGTATATTTGT+TGG + chr4.3:21238168-21238187 MS.gene40086:intron 30.0%
CGAAAACAAAAGAGAAATCT+AGG - chr4.3:21240425-21240444 None:intergenic 30.0%
CTGCAAAACAATCAAAAGAA+AGG - chr4.3:21238404-21238423 None:intergenic 30.0%
GAACCATTGTAAATAACTGA+AGG + chr4.3:21240186-21240205 MS.gene40086:intron 30.0%
GAATAGTGAATCGATAAAAC+AGG - chr4.3:21240448-21240467 None:intergenic 30.0%
GTTCACATAGAATCAGAAAA+AGG + chr4.3:21240348-21240367 MS.gene40086:intron 30.0%
TCATGTGTTTCTTTAATGGA+GGG + chr4.3:21238629-21238648 MS.gene40086:CDS 30.0%
TGAATAAAACAACACCTTCT+AGG - chr4.3:21240380-21240399 None:intergenic 30.0%
TGATATCATGGTATCATTCA+TGG + chr4.3:21238315-21238334 MS.gene40086:intron 30.0%
TGGTAAATAACCTGATTGAA+AGG + chr4.3:21239669-21239688 MS.gene40086:CDS 30.0%
TTCATGTGTTTCTTTAATGG+AGG + chr4.3:21238628-21238647 MS.gene40086:CDS 30.0%
! AACCCAACAAATACTCTTTT+TGG + chr4.3:21238854-21238873 MS.gene40086:CDS 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG - chr4.3:21238855-21238874 None:intergenic 30.0%
!! TAAGAACAAAAGCACCAATT+TGG - chr4.3:21239015-21239034 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG + chr4.3:21238073-21238092 MS.gene40086:intron 30.0%
!! TGATAGTATTGATCTTGCAA+AGG + chr4.3:21239487-21239506 MS.gene40086:CDS 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG - chr4.3:21238859-21238878 None:intergenic 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG - chr4.3:21240145-21240164 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG - chr4.3:21240143-21240162 None:intergenic 30.0%
AAAAGAGTTTGAGCGAGTAT+AGG + chr4.3:21241022-21241041 MS.gene40086:CDS 35.0%
AAAGAGTTTGAGCGAGTATA+GGG + chr4.3:21241023-21241042 MS.gene40086:CDS 35.0%
AATCGAGTAGATTGATGTGT+CGG - chr4.3:21241001-21241020 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG + chr4.3:21239997-21240016 MS.gene40086:CDS 35.0%
AGACCCAAATGATAGTATCA+CGG - chr4.3:21238101-21238120 None:intergenic 35.0%
AGATGCCAACATATCTATCA+AGG + chr4.3:21239721-21239740 MS.gene40086:CDS 35.0%
AGGCCTTCAGTTATTTACAA+TGG - chr4.3:21240192-21240211 None:intergenic 35.0%
AGTATCTTACTGACATTCCA+AGG + chr4.3:21240153-21240172 MS.gene40086:intron 35.0%
ATAGAGATTTACCGATCGAA+AGG - chr4.3:21237834-21237853 None:intergenic 35.0%
ATCATATGCAGCTCAAAAGT+GGG + chr4.3:21238444-21238463 MS.gene40086:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG + chr4.3:21239733-21239752 MS.gene40086:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG - chr4.3:21240004-21240023 None:intergenic 35.0%
GAAAAAGGATAACACCTAGA+AGG + chr4.3:21240363-21240382 MS.gene40086:intron 35.0%
GATATTCAAATGCTTTGCAC+CGG - chr4.3:21239621-21239640 None:intergenic 35.0%
GTATCTTACTGACATTCCAA+GGG + chr4.3:21240154-21240173 MS.gene40086:intron 35.0%
GTTCCGTGATACTATCATTT+GGG + chr4.3:21238095-21238114 MS.gene40086:intron 35.0%
TAAATAACTGAAGGCCTGTT+TGG + chr4.3:21240195-21240214 MS.gene40086:intron 35.0%
TAACAACCTGTCATTGAACA+TGG - chr4.3:21238222-21238241 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG + chr4.3:21239676-21239695 MS.gene40086:CDS 35.0%
TCAAAAGTGACTTCAATCTG+AGG - chr4.3:21240793-21240812 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG - chr4.3:21237859-21237878 None:intergenic 35.0%
TGTTTCTTTAATGGAGGGAA+AGG + chr4.3:21238634-21238653 MS.gene40086:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG - chr4.3:21239988-21240007 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG - chr4.3:21240860-21240879 None:intergenic 35.0%
! ACTTTTGACATAGATGCCAA+TGG + chr4.3:21240805-21240824 MS.gene40086:CDS 35.0%
! CTTTTGACATAGATGCCAAT+GGG + chr4.3:21240806-21240825 MS.gene40086:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG + chr4.3:21238561-21238580 MS.gene40086:intron 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG - chr4.3:21238914-21238933 None:intergenic 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG - chr4.3:21238860-21238879 None:intergenic 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG + chr4.3:21238409-21238428 MS.gene40086:intron 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG - chr4.3:21240848-21240867 None:intergenic 35.0%
!!! AGGCCTGTTTGGTTTTATTT+TGG + chr4.3:21240206-21240225 MS.gene40086:intron 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG - chr4.3:21240138-21240157 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG + chr4.3:21239232-21239251 MS.gene40086:CDS 35.0%
AAAGATGCTGGTAGAATTGC+CGG + chr4.3:21239136-21239155 MS.gene40086:CDS 40.0%
AACAAAGCCGTGTCAAAGAT+TGG + chr4.3:21241156-21241175 MS.gene40086:CDS 40.0%
AATTCTCAGCACTTCAAGAC+CGG - chr4.3:21239158-21239177 None:intergenic 40.0%
ACCAATGGTGACACTTTCTT+GGG + chr4.3:21239407-21239426 MS.gene40086:CDS 40.0%
AGAGACAGTAACAATCCCAT+TGG - chr4.3:21240824-21240843 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG + chr4.3:21239207-21239226 MS.gene40086:CDS 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG - chr4.3:21239705-21239724 None:intergenic 40.0%
ATGCTGACCAATCTTTGACA+CGG - chr4.3:21241166-21241185 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG - chr4.3:21240173-21240192 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG + chr4.3:21239832-21239851 MS.gene40086:CDS 40.0%
CATCATATGCAGCTCAAAAG+TGG + chr4.3:21238443-21238462 MS.gene40086:CDS 40.0%
CTGTTACCATGTTCAATGAC+AGG + chr4.3:21238213-21238232 MS.gene40086:intron 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr4.3:21239104-21239123 MS.gene40086:CDS 40.0%
CTTGGAGAATTTGACCTTGT+TGG + chr4.3:21240742-21240761 MS.gene40086:CDS 40.0%
CTTTAATGGAGGGAAAGGTA+AGG + chr4.3:21238639-21238658 MS.gene40086:intron 40.0%
GGTACCCTATAAGATTGTCA+AGG + chr4.3:21238937-21238956 MS.gene40086:CDS 40.0%
GGTGCCTTGACAATCTTATA+GGG - chr4.3:21238944-21238963 None:intergenic 40.0%
GGTTCCGTGATACTATCATT+TGG + chr4.3:21238094-21238113 MS.gene40086:intron 40.0%
GTTGACTAGATCGAAGTTTG+AGG + chr4.3:21239643-21239662 MS.gene40086:CDS 40.0%
TAAGATGAAGGAAACTGCTG+AGG + chr4.3:21239036-21239055 MS.gene40086:CDS 40.0%
TACCAATGGTGACACTTTCT+TGG + chr4.3:21239406-21239425 MS.gene40086:CDS 40.0%
TAGGGAAAAGATTCCTAGTG+AGG + chr4.3:21241041-21241060 MS.gene40086:CDS 40.0%
TATGGGATGAACAGCAAAGA+GGG + chr4.3:21239208-21239227 MS.gene40086:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG - chr4.3:21239830-21239849 None:intergenic 40.0%
TCGCGAAAACGAGAAACTTA+GGG - chr4.3:21240520-21240539 None:intergenic 40.0%
TCTTTCAAGCAGCTCTTACA+GGG - chr4.3:21239704-21239723 None:intergenic 40.0%
TGAGCATCATTGAAGTAAGC+TGG - chr4.3:21239103-21239122 None:intergenic 40.0%
TGATGATCCGCAAACACAAA+AGG + chr4.3:21238904-21238923 MS.gene40086:CDS 40.0%
TGCATAGCGTATCAATCTGT+GGG + chr4.3:21237927-21237946 MS.gene40086:intron 40.0%
TGCCATACAGTACAGAACAA+AGG - chr4.3:21238505-21238524 None:intergenic 40.0%
TGCCTTTGTTCTGTACTGTA+TGG + chr4.3:21238500-21238519 MS.gene40086:intron 40.0%
TGCGAAGGAAATTGAAGATG+CGG + chr4.3:21241065-21241084 MS.gene40086:CDS 40.0%
TGGTATCATTCATGGAACAG+CGG + chr4.3:21238323-21238342 MS.gene40086:intron 40.0%
TGTAGGAATTGTTGTGTTGC+GGG - chr4.3:21239987-21240006 None:intergenic 40.0%
TGTGTGTTAGGGATGATGAA+AGG + chr4.3:21238124-21238143 MS.gene40086:intron 40.0%
TTGCATAGCGTATCAATCTG+TGG + chr4.3:21237926-21237945 MS.gene40086:intron 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG + chr4.3:21239815-21239834 MS.gene40086:CDS 40.0%
TTTGGCACCAAACGTTTGAT+TGG + chr4.3:21238872-21238891 MS.gene40086:CDS 40.0%
! AAGATTGGTCAGCATATGTC+AGG + chr4.3:21241171-21241190 MS.gene40086:CDS 40.0%
! AAGGGTATAAGCATTAGTCC+AGG - chr4.3:21238715-21238734 None:intergenic 40.0%
! CACTTTTGAGCTGCATATGA+TGG - chr4.3:21238445-21238464 None:intergenic 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG + chr4.3:21239649-21239668 MS.gene40086:CDS 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG + chr4.3:21238753-21238772 MS.gene40086:CDS 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG + chr4.3:21239392-21239411 MS.gene40086:intron 40.0%
!! AACAAAAGCACCAATTTGGC+TGG - chr4.3:21239011-21239030 None:intergenic 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG - chr4.3:21239010-21239029 None:intergenic 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG + chr4.3:21239235-21239254 MS.gene40086:CDS 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG - chr4.3:21240139-21240158 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG - chr4.3:21240137-21240156 None:intergenic 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG + chr4.3:21238683-21238702 MS.gene40086:intron 40.0%
AACAGTATAGCCAGTCGCAA+AGG - chr4.3:21238198-21238217 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG + chr4.3:21239410-21239429 MS.gene40086:CDS 45.0%
ACCCAAAGTCTCAATACCCA+GGG - chr4.3:21239942-21239961 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG + chr4.3:21239190-21239209 MS.gene40086:CDS 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG + chr4.3:21238453-21238472 MS.gene40086:CDS 45.0%
AGCTGACAATCAGACTCAAG+TGG + chr4.3:21240669-21240688 MS.gene40086:CDS 45.0%
ATGCTCAGAGAGATCAGGAA+AGG + chr4.3:21240947-21240966 MS.gene40086:CDS 45.0%
ATGGGATGAACAGCAAAGAG+GGG + chr4.3:21239209-21239228 MS.gene40086:CDS 45.0%
ATTGGTCAGCATATGTCAGG+TGG + chr4.3:21241174-21241193 MS.gene40086:CDS 45.0%
ATTTCCTTCGCAACCTCACT+AGG - chr4.3:21241057-21241076 None:intergenic 45.0%
CAGTATTCTCCCAGCCAAAT+TGG + chr4.3:21238998-21239017 MS.gene40086:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG - chr4.3:21239595-21239614 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG - chr4.3:21238587-21238606 None:intergenic 45.0%
CTCGCGAAAACGAGAAACTT+AGG - chr4.3:21240521-21240540 None:intergenic 45.0%
CTGCAGCTGCACTTTCATAT+GGG + chr4.3:21239191-21239210 MS.gene40086:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG + chr4.3:21239797-21239816 MS.gene40086:CDS 45.0%
GATGCATCAGCAGTGATGAA+AGG - chr4.3:21239599-21239618 None:intergenic 45.0%
GATTTGAGAACGGCTATAGC+AGG + chr4.3:21241093-21241112 MS.gene40086:CDS 45.0%
GCACCAAACGTTTGATTGGT+AGG + chr4.3:21238876-21238895 MS.gene40086:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG - chr4.3:21239895-21239914 None:intergenic 45.0%
GCTGACAATCAGACTCAAGT+GGG + chr4.3:21240670-21240689 MS.gene40086:CDS 45.0%
GGGTGCCTTGACAATCTTAT+AGG - chr4.3:21238945-21238964 None:intergenic 45.0%
GGTTAAGAAAGATGGCAGCA+TGG - chr4.3:21239329-21239348 None:intergenic 45.0%
GGTTGGGGGAGATTTGATTA+AGG - chr4.3:21240122-21240141 None:intergenic 45.0%
GTGCCTTTGTCCTTTCAATC+AGG - chr4.3:21239682-21239701 None:intergenic 45.0%
TCAACCCATGCATCTCCATT+GGG - chr4.3:21238965-21238984 None:intergenic 45.0%
TCAGACTCAAGTGGGTATCA+AGG + chr4.3:21240678-21240697 MS.gene40086:CDS 45.0%
TCTGCCAAAGACAAATCCAC+TGG + chr4.3:21240841-21240860 MS.gene40086:CDS 45.0%
TGCGGTCTCAGATTTGAGAA+CGG + chr4.3:21241083-21241102 MS.gene40086:CDS 45.0%
TGTTGGATTACCTTTGCGAC+TGG + chr4.3:21238185-21238204 MS.gene40086:intron 45.0%
TTCAACCCATGCATCTCCAT+TGG - chr4.3:21238966-21238985 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG + chr4.3:21239599-21239618 MS.gene40086:CDS 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG + chr4.3:21238113-21238132 MS.gene40086:intron 45.0%
TTGGTCAGCATATGTCAGGT+GGG + chr4.3:21241175-21241194 MS.gene40086:CDS 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG + chr4.3:21238112-21238131 MS.gene40086:intron 45.0%
! AAGATTGTCAAGGCACCCAA+TGG + chr4.3:21238947-21238966 MS.gene40086:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG - chr4.3:21240779-21240798 None:intergenic 45.0%
! AGATCTGTGAATCTGAGACG+TGG + chr4.3:21238008-21238027 MS.gene40086:intron 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG - chr4.3:21239191-21239210 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG - chr4.3:21240780-21240799 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG + chr4.3:21238584-21238603 MS.gene40086:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG - chr4.3:21238484-21238503 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG + chr4.3:21239746-21239765 MS.gene40086:CDS 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG - chr4.3:21239190-21239209 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG - chr4.3:21240781-21240800 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG + chr4.3:21239937-21239956 MS.gene40086:CDS 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG - chr4.3:21239411-21239430 None:intergenic 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG + chr4.3:21239938-21239957 MS.gene40086:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG + chr4.3:21238694-21238713 MS.gene40086:intron 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG - chr4.3:21240136-21240155 None:intergenic 45.0%
ACCTCTTCATACTCTGCCTC+TGG - chr4.3:21241252-21241271 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG + chr4.3:21239922-21239941 MS.gene40086:CDS 50.0%
AGGATAAGCTTGCGTTGCAG+AGG + chr4.3:21239507-21239526 MS.gene40086:CDS 50.0%
AGGCAGGCAACAAAAGATGC+TGG + chr4.3:21239124-21239143 MS.gene40086:CDS 50.0%
ATGAGGTTCTTCTCGTCGGT+GGG + chr4.3:21239750-21239769 MS.gene40086:CDS 50.0%
ATTACCATCCGCTCATCAGG+AGG + chr4.3:21240877-21240896 MS.gene40086:CDS 50.0%
CAACAAGCAGCTCTCCTTTC+TGG - chr4.3:21238805-21238824 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG - chr4.3:21239943-21239962 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG + chr4.3:21238803-21238822 MS.gene40086:CDS 50.0%
CAGAGGAAGAAGCAAGATCG+CGG - chr4.3:21237805-21237824 None:intergenic 50.0%
CAGATTACCATCCGCTCATC+AGG + chr4.3:21240874-21240893 MS.gene40086:CDS 50.0%
CATATGTCAGGTGGGTCAAG+TGG + chr4.3:21241183-21241202 MS.gene40086:CDS 50.0%
CCTGATGAGGCTGTTGCAAT+GGG + chr4.3:21239845-21239864 MS.gene40086:CDS 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG + chr4.3:21237820-21237839 MS.gene40086:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr4.3:21239108-21239127 MS.gene40086:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG - chr4.3:21239788-21239807 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG + chr4.3:21239046-21239065 MS.gene40086:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG + chr4.3:21239775-21239794 MS.gene40086:CDS 50.0%
GATGTCACTCCTCTATCCCT+GGG + chr4.3:21239923-21239942 MS.gene40086:CDS 50.0%
GATTCCTAGTGAGGTTGCGA+AGG + chr4.3:21241050-21241069 MS.gene40086:CDS 50.0%
GCGCCTACCAATCAAACGTT+TGG - chr4.3:21238882-21238901 None:intergenic 50.0%
GCTGCAGACAACAAGAGTCT+TGG + chr4.3:21240724-21240743 MS.gene40086:CDS 50.0%
GGGATAGAGGAGTGACATCT+AGG - chr4.3:21239922-21239941 None:intergenic 50.0%
GTCTCAATACCCAGGGATAG+AGG - chr4.3:21239935-21239954 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG + chr4.3:21238788-21238807 MS.gene40086:CDS 50.0%
GTTGCATGCTCAGAGAGATC+AGG + chr4.3:21240942-21240961 MS.gene40086:CDS 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG + chr4.3:21241198-21241217 MS.gene40086:CDS 50.0%
TCCAGAGGCAGAGTATGAAG+AGG + chr4.3:21241248-21241267 MS.gene40086:CDS 50.0%
TCCTGATGAGGCTGTTGCAA+TGG + chr4.3:21239844-21239863 MS.gene40086:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG + chr4.3:21239778-21239797 MS.gene40086:CDS 50.0%
TGGTTGAAGGCAACCACTGA+TGG - chr4.3:21238785-21238804 None:intergenic 50.0%
TGTACCTAAAGTGCAGGAGG+TGG + chr4.3:21239781-21239800 MS.gene40086:CDS 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG + chr4.3:21238467-21238486 MS.gene40086:CDS 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG + chr4.3:21240689-21240708 MS.gene40086:CDS 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG - chr4.3:21238798-21238817 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG + chr4.3:21239941-21239960 MS.gene40086:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG + chr4.3:21238569-21238588 MS.gene40086:intron 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG + chr4.3:21239238-21239257 MS.gene40086:CDS 50.0%
ACCTGGAGAACCTCCATCAG+AGG - chr4.3:21241214-21241233 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG + chr4.3:21238769-21238788 MS.gene40086:CDS 55.0%
AGGAAGAAGCAAGATCGCGG+CGG - chr4.3:21237802-21237821 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG + chr4.3:21238957-21238976 MS.gene40086:CDS 55.0%
AGTGGAGGTTCCTCTGATGG+AGG + chr4.3:21241201-21241220 MS.gene40086:CDS 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG + chr4.3:21241186-21241205 MS.gene40086:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG - chr4.3:21239848-21239867 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG - chr4.3:21237822-21237841 None:intergenic 55.0%
CTGAGAGTCCTCCTGATGAG+CGG - chr4.3:21240888-21240907 None:intergenic 55.0%
CTTCAGGGTGGTATTCTCCG+TGG + chr4.3:21239875-21239894 MS.gene40086:CDS 55.0%
GATGAGGTTCTTCTCGTCGG+TGG + chr4.3:21239749-21239768 MS.gene40086:CDS 55.0%
GCAATGGGAGCAGCTCTTCA+GGG + chr4.3:21239860-21239879 MS.gene40086:CDS 55.0%
GGCACCCAATGGAGATGCAT+GGG + chr4.3:21238958-21238977 MS.gene40086:CDS 55.0%
GTTGGTTACAGCCTGACGCT+TGG - chr4.3:21238837-21238856 None:intergenic 55.0%
TCCTCTGATGGAGGTTCTCC+AGG + chr4.3:21241210-21241229 MS.gene40086:CDS 55.0%
TCTGATGGAGGTTCTCCAGG+TGG + chr4.3:21241213-21241232 MS.gene40086:CDS 55.0%
TGCAATGGGAGCAGCTCTTC+AGG + chr4.3:21239859-21239878 MS.gene40086:CDS 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG + chr4.3:21240690-21240709 MS.gene40086:CDS 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG + chr4.3:21240688-21240707 MS.gene40086:CDS 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG + chr4.3:21241224-21241243 MS.gene40086:CDS 55.0%
ATGGGAGCAGCTCTTCAGGG+TGG + chr4.3:21239863-21239882 MS.gene40086:CDS 60.0%
CAGCCATTTCACGCTCCCCT+TGG - chr4.3:21240708-21240727 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG - chr4.3:21240884-21240903 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG + chr4.3:21241216-21241235 MS.gene40086:CDS 60.0%
GGGCAGGAGGAATGCCAACA+AGG - chr4.3:21240759-21240778 None:intergenic 60.0%
GTTACAGCCTGACGCTTGGC+AGG - chr4.3:21238833-21238852 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG - chr4.3:21240775-21240794 None:intergenic 60.0%
TGGTACACCTGCCAAGCGTC+AGG + chr4.3:21238823-21238842 MS.gene40086:CDS 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG + chr4.3:21240702-21240721 MS.gene40086:CDS 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG + chr4.3:21241233-21241252 MS.gene40086:CDS 60.0%
CAAGATCGCGGCGGAGAGCA+CGG - chr4.3:21237793-21237812 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG - chr4.3:21241231-21241250 None:intergenic 65.0%
GGCAAACCTCTTGGGGCAGG+AGG - chr4.3:21240772-21240791 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG + chr4.3:21240763-21240782 MS.gene40086:CDS 65.0%
! GAGAGCACGGCGCAAGACGG+CGG - chr4.3:21237780-21237799 None:intergenic 70.0%
! GCGGAGAGCACGGCGCAAGA+CGG - chr4.3:21237783-21237802 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 21237773 21241281 21237773 ID=MS.gene40086
chr4.3 mRNA 21237773 21241281 21237773 ID=MS.gene40086.t1;Parent=MS.gene40086
chr4.3 exon 21237773 21237841 21237773 ID=MS.gene40086.t1.exon1;Parent=MS.gene40086.t1
chr4.3 CDS 21237773 21237841 21237773 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
chr4.3 exon 21238424 21238488 21238424 ID=MS.gene40086.t1.exon2;Parent=MS.gene40086.t1
chr4.3 CDS 21238424 21238488 21238424 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
chr4.3 exon 21238577 21238655 21238577 ID=MS.gene40086.t1.exon3;Parent=MS.gene40086.t1
chr4.3 CDS 21238577 21238655 21238577 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
chr4.3 exon 21238740 21239306 21238740 ID=MS.gene40086.t1.exon4;Parent=MS.gene40086.t1
chr4.3 CDS 21238740 21239306 21238740 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
chr4.3 exon 21239398 21240018 21239398 ID=MS.gene40086.t1.exon5;Parent=MS.gene40086.t1
chr4.3 CDS 21239398 21240018 21239398 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
chr4.3 exon 21240655 21241281 21240655 ID=MS.gene40086.t1.exon6;Parent=MS.gene40086.t1
chr4.3 CDS 21240655 21241281 21240655 ID=cds.MS.gene40086.t1;Parent=MS.gene40086.t1
Gene Sequence

>MS.gene40086

ATGGCCGCCGTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGGTAAATCTCTATTGCCTCACTTCACTATTTTTGCTCATTTATTGTGTTATAGATTTATCTTCAATGTTTTATGAGTTAGGTTATTTGCATAGCGTATCAATCTGTGGGTTTTGCTTAAATTGTTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCGATTTTAAGATCTGTGAATCTGAGACGTGGTTCTGTGAATCTGAGACGTGAATCTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCTGTGGTTCCGTGATACTATCATTTGGGTCTCTGTGTGTGTTAGGGATGATGAAAGGTAATTTTTTTTGTTACCGATCATTGGGTCATGTATATTTGTTGGATTACCTTTGCGACTGGCTATACTGTTACCATGTTCAATGACAGGTTGTTACTGCTTTGTTGCATCCAGTCTAATTTTTCATAATTTTATAATTGATTCTTGTATTGTGACTAATAATAACTGTTGATATCATGGTATCATTCATGGAACAGCGGTTGTTAGATTTGTTTTAGTCTTGTATGTAATGAGCATTGTTCAGAAGATAATTTTCCTTTCTTTTGATTGTTTTGCAGTTGACAGGCAGCACTAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGGTGCTTTGTTTTGCCTTTGTTCTGTACTGTATGGCAGTTTCAATTTTTCATCAAATTTGCTTATTGTAAAATTGCTTTTGTACTACAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGGTAAGGCTCTATTTCTCTTGATTACTTTTGGACATGTTTTTGGTGCATGGTTTTTGCCTGGACTAATGCTTATACCCTTTTCAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTATGAACACTTATTTCTTCCATGCTGCCATCTTTCTTAACCTATCATTAGGAATAATTATGTAAGTGGTCACTGATAACATATTTTTCAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGTGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTAATTTTAATTACTCAAGACAACTTTTTTATAAACATTTACTTAAGAATTGTTTTCTATTTCTGAGGAAGTAATGTAGCATTGAATCACACAATTATTTCCTTAATCAAATCTCCCCCAACCCCTCCAAAAAAAGTATCTTACTGACATTCCAAGGGTAAAGAAGAGAACCATTGTAAATAACTGAAGGCCTGTTTGGTTTTATTTTGGTTTATAGTTTTTAAATGCTCTTTTGCAAAATTCCAAAAACTGTTTTTAAGAAAAAATTTAAAAATAAAATCTGCTTGGTAATTTGAAACAGCAATACGATTACGATTTTAATGTAGTTTGTTCACATAGAATCAGAAAAAGGATAACACCTAGAAGGTGTTGTTTTATTCAATAAAAAGGAAATCAAACAGGCCCTAGATTTCTCTTTTGTTTTCGCCTGTTTTATCGATTCACTATTCAGATTTTTTTTAATGTAACATGTAGATTTTGAAAAGGAAATCAAACAGGCCCTAAGTTTCTCGTTTTCGCGAGTTTTATCATTTCAGATGTTTATCCTATTCAGATTTATTTAATGTAACAGGTATATCCTATTCAGATTTATTTAATGTAACAGGTATATTCTTAATTTTGAAATCATTGTTTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACTTTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATCGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATAGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGACGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>MS.gene40086.t1

MAAVLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAIAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK