AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053617

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053617.t1 MTR_4g092920 98.815 675 8 0 1 675 1 675 0.0 1352
MS.gene053617.t1 MTR_2g010020 90.342 673 63 2 3 675 6 676 0.0 1216
MS.gene053617.t1 MTR_2g010020 90.208 674 63 3 3 675 6 677 0.0 1211
MS.gene053617.t1 MTR_4g092920 98.706 541 7 0 135 675 1 541 0.0 1079
MS.gene053617.t1 MTR_2g005690 54.743 643 286 3 27 666 45 685 0.0 696
MS.gene053617.t1 MTR_8g099945 53.448 580 244 10 53 614 38 609 0.0 581
MS.gene053617.t1 MTR_8g099795 53.448 580 244 10 53 614 38 609 0.0 579
MS.gene053617.t1 MTR_4g063710 49.298 641 283 12 54 659 10 643 0.0 570
MS.gene053617.t1 MTR_4g063720 52.422 578 249 9 54 612 10 580 0.0 568
MS.gene053617.t1 MTR_7g024580 49.383 648 291 11 54 673 10 648 0.0 567
MS.gene053617.t1 MTR_7g099680 49.373 638 287 11 54 662 10 640 0.0 567
MS.gene053617.t1 MTR_7g024390 52.249 578 250 9 54 612 10 580 0.0 567
MS.gene053617.t1 MTR_4g130540 50.081 621 281 10 54 652 9 622 0.0 567
MS.gene053617.t1 MTR_2g017730 45.183 602 293 13 51 630 6 592 2.26e-163 483
MS.gene053617.t1 MTR_7g025770 46.769 588 285 13 46 613 2 581 4.21e-162 480
MS.gene053617.t1 MTR_7g451380 46.299 581 281 12 54 612 10 581 5.28e-161 477
MS.gene053617.t1 MTR_7g026090 44.020 602 305 11 54 629 10 605 8.26e-161 476
MS.gene053617.t1 MTR_7g025760 45.552 562 276 10 54 595 10 561 2.73e-160 475
MS.gene053617.t1 MTR_2g038260 44.828 580 292 12 54 613 10 581 8.87e-159 471
MS.gene053617.t1 MTR_7g021440 45.675 578 290 11 54 613 10 581 2.81e-157 468
MS.gene053617.t1 MTR_8g032650 46.057 558 278 11 54 595 10 560 1.03e-156 466
MS.gene053617.t1 MTR_7g026170 45.189 582 287 14 54 613 10 581 2.76e-156 465
MS.gene053617.t1 MTR_7g026030 45.161 558 283 11 54 595 10 560 5.86e-156 464
MS.gene053617.t1 MTR_6g033760 44.345 557 289 9 54 595 10 560 7.18e-156 464
MS.gene053617.t1 MTR_4g079590 45.876 582 283 14 54 613 10 581 3.87e-155 462
MS.gene053617.t1 MTR_2g032550 44.538 595 294 13 54 626 11 591 6.12e-154 459
MS.gene053617.t1 MTR_7g025620 43.486 591 309 12 54 626 10 593 7.78e-154 459
MS.gene053617.t1 MTR_5g066800 42.810 612 292 14 54 634 10 594 3.84e-153 457
MS.gene053617.t1 MTR_7g025790 44.624 558 286 10 54 595 10 560 9.09e-152 453
MS.gene053617.t1 MTR_7g029415 46.359 563 269 15 52 593 15 565 1.28e-151 453
MS.gene053617.t1 MTR_7g025720 45.144 556 282 10 54 593 10 558 5.72e-151 451
MS.gene053617.t1 MTR_7g025820 44.821 560 283 10 54 595 10 561 1.29e-150 450
MS.gene053617.t1 MTR_7g011590 45.946 555 267 13 54 593 10 546 9.12e-150 447
MS.gene053617.t1 MTR_7g025740 44.092 567 285 13 54 595 10 569 4.19e-149 447
MS.gene053617.t1 MTR_7g024030 45.161 558 283 11 54 595 10 560 4.68e-149 446
MS.gene053617.t1 MTR_2g022050 45.455 583 279 12 54 606 10 583 4.98e-149 446
MS.gene053617.t1 MTR_7g026110 43.067 613 320 15 54 647 10 612 1.08e-148 445
MS.gene053617.t1 MTR_6g033850 43.627 557 293 9 54 595 10 560 3.26e-148 446
MS.gene053617.t1 MTR_2g437440 42.761 594 288 13 54 626 10 572 1.03e-147 442
MS.gene053617.t1 MTR_7g078190 43.929 560 289 12 54 595 10 562 1.57e-145 437
MS.gene053617.t1 MTR_7g025630 43.063 555 285 12 54 595 10 546 6.43e-144 432
MS.gene053617.t1 MTR_7g074460 43.885 556 272 11 54 593 10 541 1.41e-143 431
MS.gene053617.t1 MTR_2g038270 42.785 596 306 15 46 613 2 590 2.23e-142 429
MS.gene053617.t1 MTR_7g026130 46.857 525 244 13 40 544 1 510 5.21e-142 431
MS.gene053617.t1 MTR_6g033820 40.925 562 306 9 54 595 10 565 1.09e-141 429
MS.gene053617.t1 MTR_6g033955 41.459 562 303 9 54 595 10 565 1.32e-141 428
MS.gene053617.t1 MTR_6g033870 41.509 583 310 12 54 612 11 586 3.11e-141 428
MS.gene053617.t1 MTR_4g027145 41.990 593 302 15 54 613 10 593 1.64e-140 425
MS.gene053617.t1 MTR_8g103930 40.659 637 319 19 40 645 1 609 6.35e-139 420
MS.gene053617.t1 MTR_2g032580 41.696 578 283 10 54 613 10 551 9.58e-139 419
MS.gene053617.t1 MTR_7g078210 43.828 559 290 12 54 595 10 561 1.48e-138 419
MS.gene053617.t1 MTR_1g017130 41.897 580 269 16 54 613 10 541 2.01e-137 416
MS.gene053617.t1 MTR_7g026140 43.672 561 268 17 54 593 10 543 3.64e-137 416
MS.gene053617.t1 MTR_7g025260 44.338 521 269 9 91 595 18 533 2.23e-135 410
MS.gene053617.t1 MTR_7g451360 42.626 556 239 14 54 593 10 501 3.41e-130 396
MS.gene053617.t1 MTR_7g035155 40.587 579 264 16 54 613 10 527 5.53e-123 377
MS.gene053617.t1 MTR_7g007000 40.860 558 261 14 54 593 10 516 9.27e-120 370
MS.gene053617.t1 MTR_6g033800 42.405 474 255 8 135 595 1 469 1.10e-118 367
MS.gene053617.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.70e-104 350
MS.gene053617.t1 MTR_2g040370 47.475 396 188 8 54 436 1414 1802 1.92e-94 320
MS.gene053617.t1 MTR_2g040370 48.346 393 186 6 43 425 1019 1404 1.94e-104 349
MS.gene053617.t1 MTR_2g040370 47.792 385 183 7 54 427 1414 1791 8.52e-95 322
MS.gene053617.t1 MTR_2g040160 46.770 387 189 6 54 430 1110 1489 1.58e-102 342
MS.gene053617.t1 MTR_2g040260 46.753 385 192 5 54 430 1039 1418 1.59e-101 340
MS.gene053617.t1 MTR_2g032160 45.576 373 182 7 54 412 10 375 2.81e-100 315
MS.gene053617.t1 MTR_1g041565 37.651 579 268 18 52 613 4 506 1.59e-98 313
MS.gene053617.t1 MTR_2g040350 43.439 442 212 12 10 430 780 1204 1.96e-96 323
MS.gene053617.t1 MTR_2g040350 43.439 442 212 12 10 430 998 1422 6.96e-96 323
MS.gene053617.t1 MTR_2g040220 45.407 381 187 7 54 420 1019 1392 8.20e-91 310
MS.gene053617.t1 MTR_2g040220 47.475 99 44 1 481 571 1397 1495 8.14e-18 89.0
MS.gene053617.t1 MTR_6g034005 36.266 466 272 10 125 577 2 455 5.61e-88 290
MS.gene053617.t1 MTR_1g077230 50.365 274 124 4 54 316 10 282 1.72e-85 270
MS.gene053617.t1 MTR_4g063720 45.029 342 164 7 342 659 231 572 2.58e-83 274
MS.gene053617.t1 MTR_4g063720 55.556 216 86 3 54 260 10 224 1.94e-69 237
MS.gene053617.t1 MTR_7g026080 51.220 246 108 5 46 280 2 246 2.03e-72 235
MS.gene053617.t1 MTR_3g051300 33.990 406 251 6 53 446 3 403 1.51e-67 236
MS.gene053617.t1 MTR_4g012050 32.598 408 258 5 53 448 3 405 4.85e-66 233
MS.gene053617.t1 MTR_2g102180 31.683 404 259 6 53 444 3 401 4.03e-63 225
MS.gene053617.t1 MTR_5g006180 28.860 544 303 13 29 529 5 507 8.16e-63 219
MS.gene053617.t1 MTR_5g092570 31.640 433 270 7 53 466 3 428 3.86e-62 221
MS.gene053617.t1 MTR_4g088515 34.945 455 201 13 27 471 250 619 6.77e-62 218
MS.gene053617.t1 MTR_6g033855 35.673 342 134 4 156 494 39 297 1.45e-59 203
MS.gene053617.t1 MTR_2g031670 46.781 233 110 4 65 284 45 276 3.94e-59 202
MS.gene053617.t1 MTR_6g033810 38.333 300 133 5 156 450 39 291 1.90e-53 186
MS.gene053617.t1 MTR_7g026050 37.101 345 173 9 279 613 1 311 8.98e-53 186
MS.gene053617.t1 MTR_1207s0010 51.807 166 76 1 156 317 10 175 2.99e-51 176
MS.gene053617.t1 MTR_4g107920 29.771 524 316 15 38 531 5 506 2.48e-50 184
MS.gene053617.t1 MTR_4g115780 30.361 527 324 12 48 540 135 652 4.77e-48 180
MS.gene053617.t1 MTR_5g090110 27.586 493 293 12 54 517 29 486 3.70e-47 175
MS.gene053617.t1 MTR_1g077240 43.600 250 124 7 365 602 6 250 1.14e-42 156
MS.gene053617.t1 MTR_5g097190 38.333 240 99 6 54 287 159 355 3.21e-42 157
MS.gene053617.t1 MTR_6g478100 38.498 213 107 4 80 283 10 207 3.38e-40 150
MS.gene053617.t1 MTR_3g081170 29.017 417 263 11 40 430 15 424 5.83e-38 151
MS.gene053617.t1 MTR_7g026180 50.427 117 54 1 121 233 23 139 2.03e-32 128
MS.gene053617.t1 MTR_5g005870 31.381 239 159 5 339 573 71 308 2.90e-31 127
MS.gene053617.t1 MTR_6g033910 34.742 213 89 4 107 313 9 177 2.99e-31 120
MS.gene053617.t1 MTR_7g074540 46.099 141 74 2 454 593 4 143 9.03e-31 120
MS.gene053617.t1 MTR_7g451390 44.099 161 77 6 471 626 10 162 2.32e-26 107
MS.gene053617.t1 MTR_2g017710 32.950 261 83 8 261 515 19 193 4.20e-23 100
MS.gene053617.t1 MTR_1g116250 33.913 230 106 8 402 626 73 261 1.31e-21 96.3
MS.gene053617.t1 MTR_1g068900 41.429 140 73 5 461 595 23 158 6.70e-20 87.8
MS.gene053617.t1 MTR_4g115860 45.652 92 50 0 432 523 30 121 5.30e-19 84.0
MS.gene053617.t1 MTR_5g005890 29.493 217 95 6 119 326 7 174 1.36e-18 84.7
MS.gene053617.t1 MTR_2g040355 31.492 181 79 3 401 580 92 228 4.55e-14 73.9
MS.gene053617.t1 MTR_6g033805 50.000 64 31 1 54 117 10 72 1.41e-13 66.6
MS.gene053617.t1 MTR_4g027235 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene053617.t1 MTR_4g027085 50.746 67 30 2 54 118 10 75 1.04e-12 64.3
MS.gene053617.t1 MTR_2g040375 60.000 55 22 0 433 487 51 105 2.74e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053617.t1 AT5G09590 83.505 679 107 2 2 675 4 682 0.0 1142
MS.gene053617.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene053617.t1 AT4G37910 82.169 673 116 2 3 672 5 676 0.0 1090
MS.gene053617.t1 AT4G24280 57.877 603 247 4 47 645 74 673 0.0 693
MS.gene053617.t1 AT5G49910 56.774 620 261 4 47 663 74 689 0.0 692
MS.gene053617.t1 AT5G42020 54.301 558 232 9 53 595 37 586 0.0 582
MS.gene053617.t1 AT5G42020 54.301 558 232 9 53 595 42 591 0.0 581
MS.gene053617.t1 AT5G28540 54.301 558 232 9 53 595 37 586 0.0 579
MS.gene053617.t1 AT5G02500 51.171 598 267 10 54 631 10 602 0.0 569
MS.gene053617.t1 AT3G12580 49.525 632 283 12 54 661 10 629 0.0 566
MS.gene053617.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene053617.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene053617.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene053617.t1 AT3G09440 51.903 578 252 9 54 612 10 580 0.0 562
MS.gene053617.t1 AT1G16030 48.896 634 288 11 54 663 9 630 0.0 562
MS.gene053617.t1 AT1G56410 49.431 615 284 10 54 648 10 617 0.0 560
MS.gene053617.t1 AT5G02490 48.860 614 285 10 54 643 10 618 0.0 560
MS.gene053617.t1 AT1G09080 52.900 569 245 10 53 607 42 601 0.0 555
MS.gene053617.t1 AT1G09080 52.900 569 245 10 53 607 52 611 0.0 555
MS.gene053617.t1 AT5G42020 55.967 486 191 9 53 523 37 514 4.08e-177 518
MS.gene053617.t1 AT5G02500 50.895 391 177 6 54 434 10 395 3.34e-124 379
MS.gene053617.t1 AT1G79930 32.274 409 260 5 53 449 3 406 5.77e-67 235
MS.gene053617.t1 AT1G79930 32.274 409 260 5 53 449 3 406 8.39e-67 235
MS.gene053617.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene053617.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene053617.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.00e-66 233
MS.gene053617.t1 AT1G79920 32.029 409 261 5 53 449 3 406 1.28e-66 233
MS.gene053617.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene053617.t1 AT2G32120 30.502 518 304 12 45 531 21 513 1.03e-65 227
MS.gene053617.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene053617.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene053617.t1 AT1G11660 31.220 410 264 5 53 449 3 407 7.07e-62 220
MS.gene053617.t1 AT1G11660 31.467 375 239 5 88 449 1 370 9.31e-55 200
MS.gene053617.t1 AT4G16660 27.571 457 291 11 48 469 21 472 1.98e-42 165
MS.gene053617.t1 AT4G16660 27.571 457 291 11 48 469 45 496 2.23e-42 165
MS.gene053617.t1 AT4G32208 69.444 108 32 1 569 675 46 153 1.33e-35 132

Find 177 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCATGTGTTTCTTTAA+TGG 0.139612 4.4:+21601687 MS.gene053617:CDS
CAACAAGCAGCTCTCCTTTC+TGG 0.152574 4.4:-21601864 None:intergenic
CAAGTTTGGCTCGACCTTTC+AGG 0.154885 4.4:+21601529 MS.gene053617:CDS
ACCGTTTGAAATTTCTAAAA+TGG 0.216877 4.4:-21602337 None:intergenic
TGCAATGGGAGCAGCTCTTC+AGG 0.222059 4.4:+21602921 MS.gene053617:CDS
GGGTGCCTTGACAATCTTAT+AGG 0.230055 4.4:-21602004 None:intergenic
TCAGAATTCTCAATAACTTT+AGG 0.250981 4.4:-21601805 None:intergenic
ATCTTTCAAGCAGCTCTTAC+AGG 0.256743 4.4:-21602764 None:intergenic
TAAGAACAAAAGCACCAATT+TGG 0.281100 4.4:-21602074 None:intergenic
AGCTCAAAAGTGGGCAAGTT+TGG 0.290535 4.4:+21601515 MS.gene053617:CDS
ATTACCTGACTCTTCTTTGT+AGG 0.299624 4.4:-21603063 None:intergenic
GAAACCACCTCCTGCACTTT+AGG 0.305254 4.4:-21602847 None:intergenic
TAGATCGAAGTTTGAGGCTT+TGG 0.315791 4.4:+21602711 MS.gene053617:CDS
AAAGAGTTTGAGCGAGTATA+GGG 0.317690 4.4:+21604055 MS.gene053617:CDS
TGATGTTATTGGAATTGATT+TGG 0.319512 4.4:+21601657 MS.gene053617:CDS
TACCAATGGTGACACTTTCT+TGG 0.320696 4.4:+21602468 MS.gene053617:CDS
AAAAGAGTTTGAGCGAGTAT+AGG 0.348496 4.4:+21604054 MS.gene053617:CDS
ACTGCAGCTGCACTTTCATA+TGG 0.352369 4.4:+21602252 MS.gene053617:CDS
CAATCTGAGGCAAACCTCTT+GGG 0.354482 4.4:-21603809 None:intergenic
ATCCCTGGGTATTGAGACTT+TGG 0.357413 4.4:+21602999 MS.gene053617:CDS
CTTGGAGAATTTGACCTTGT+TGG 0.357711 4.4:+21603774 MS.gene053617:CDS
AGATGATGAAATTAATAATA+TGG 0.357883 4.4:+21603938 MS.gene053617:CDS
AAAGATGCTGGTAGAATTGC+CGG 0.362237 4.4:+21602198 MS.gene053617:CDS
TCCTCTGATGGAGGTTCTCC+AGG 0.365670 4.4:+21604242 MS.gene053617:CDS
GAGGTGGTTTCAGAGATCTT+TGG 0.369528 4.4:+21602859 MS.gene053617:CDS
CAGTATTCTCCCAGCCAAAT+TGG 0.369640 4.4:+21602060 MS.gene053617:CDS
AACACAAAAGGAGATGAAAA+TGG 0.372682 4.4:+21601978 MS.gene053617:CDS
GATGTTATTGGAATTGATTT+GGG 0.373282 4.4:+21601658 MS.gene053617:CDS
TTCTCCAGGTGGTGGTGAAC+AGG 0.375092 4.4:+21604256 MS.gene053617:CDS
CCTGCTGGTAGTGATGTTAT+TGG 0.376880 4.4:+21601646 MS.gene053617:CDS
GGTGCCTTGACAATCTTATA+GGG 0.378876 4.4:-21602003 None:intergenic
TCCCTGGGTATTGAGACTTT+GGG 0.389902 4.4:+21603000 MS.gene053617:CDS
GTGCCTTTGTCCTTTCAATC+AGG 0.391952 4.4:-21602741 None:intergenic
CAGCTCTCCTTTCTGGTTGA+AGG 0.397732 4.4:-21601857 None:intergenic
CATTAAAGAAACACATGAAT+TGG 0.405929 4.4:-21601686 None:intergenic
ACCTCTTCATACTCTGCCTC+TGG 0.409681 4.4:-21604281 None:intergenic
TGTAGGAATTGTTGTGTTGC+GGG 0.416658 4.4:-21603046 None:intergenic
CAGCCATTTCACGCTCCCCT+TGG 0.422244 4.4:-21603737 None:intergenic
CAGATTACCATCCGCTCATC+AGG 0.424767 4.4:+21603906 MS.gene053617:CDS
GGGATAGAGGAGTGACATCT+AGG 0.427451 4.4:-21602981 None:intergenic
CAAGATCGCGGCGGAGAGCA+CGG 0.429764 4.4:-21600852 None:intergenic
AGATGTCACTCCTCTATCCC+TGG 0.430112 4.4:+21602984 MS.gene053617:CDS
ACCAATGGTGACACTTTCTT+GGG 0.432955 4.4:+21602469 MS.gene053617:CDS
TCAATCTGAGGCAAACCTCT+TGG 0.435495 4.4:-21603810 None:intergenic
GCTCCAAGGGGAGCGTGAAA+TGG 0.435720 4.4:+21603734 MS.gene053617:CDS
CCCATTGCAACAGCCTCATC+AGG 0.435835 4.4:-21602907 None:intergenic
TTTGGCACCAAACGTTTGAT+TGG 0.438874 4.4:+21601934 MS.gene053617:CDS
GCACCAAACGTTTGATTGGT+AGG 0.443834 4.4:+21601938 MS.gene053617:CDS
AACAAAAGCACCAATTTGGC+TGG 0.450750 4.4:-21602070 None:intergenic
AACAAAGCCGTGTCAAAGAT+TGG 0.451841 4.4:+21604188 MS.gene053617:CDS
CTCTGTCTCTGCCTTTCGAT+CGG 0.453056 4.4:+21600882 MS.gene053617:CDS
TTCATCACTGCTGATGCATC+CGG 0.456355 4.4:+21602661 MS.gene053617:CDS
TTCAACCCATGCATCTCCAT+TGG 0.460739 4.4:-21602025 None:intergenic
TCAACCCATGCATCTCCATT+GGG 0.462137 4.4:-21602024 None:intergenic
GCGCCTACCAATCAAACGTT+TGG 0.472555 4.4:-21601941 None:intergenic
ATTTCCTTCGCAACCTCACT+AGG 0.475574 4.4:-21604086 None:intergenic
CAGAAAGGAGAGCTGCTTGT+TGG 0.476199 4.4:+21601865 MS.gene053617:CDS
GTTGACTAGATCGAAGTTTG+AGG 0.481396 4.4:+21602705 MS.gene053617:CDS
AACATCCTTGATAGATATGT+TGG 0.482621 4.4:-21602788 None:intergenic
TGGTACACCTGCCAAGCGTC+AGG 0.482660 4.4:+21601885 MS.gene053617:CDS
AATTTCAAACGGTGTATTTG+AGG 0.485239 4.4:+21602347 MS.gene053617:CDS
TCAAGTGGAGGTTCCTCTGA+TGG 0.485714 4.4:+21604230 MS.gene053617:CDS
GTCTCAATACCCAGGGATAG+AGG 0.485922 4.4:-21602994 None:intergenic
TACTACAGTTCTAGGCCTGC+TGG 0.490672 4.4:+21601631 MS.gene053617:intron
CTGCAGCTGCACTTTCATAT+GGG 0.491179 4.4:+21602253 MS.gene053617:CDS
GCAATGGGAGCAGCTCTTCA+GGG 0.497054 4.4:+21602922 MS.gene053617:CDS
GTTACAGCCTGACGCTTGGC+AGG 0.501358 4.4:-21601892 None:intergenic
CTTCAATGATGCTCAGAGGC+AGG 0.501906 4.4:+21602170 MS.gene053617:CDS
AGATGCCAACATATCTATCA+AGG 0.510131 4.4:+21602783 MS.gene053617:CDS
TGATGATCCGCAAACACAAA+AGG 0.515016 4.4:+21601966 MS.gene053617:CDS
TGAGGCAAACCTCTTGGGGC+AGG 0.516215 4.4:-21603804 None:intergenic
AATTCCTACAAAGAAGAGTC+AGG 0.516535 4.4:+21603059 MS.gene053617:CDS
AAGATTGGTCAGCATATGTC+AGG 0.517534 4.4:+21604203 MS.gene053617:CDS
TGAGCATCATTGAAGTAAGC+TGG 0.518266 4.4:-21602162 None:intergenic
TGGTAAATAACCTGATTGAA+AGG 0.518643 4.4:+21602731 MS.gene053617:CDS
GAGAGCACGGCGCAAGACGG+CGG 0.518714 4.4:-21600839 None:intergenic
TGTTTCTTTAATGGAGGGAA+AGG 0.519248 4.4:+21601696 MS.gene053617:CDS
TCAGGATTTACTCCTTTGCT+AGG 0.519309 4.4:-21602889 None:intergenic
GCGGAGAGCACGGCGCAAGA+CGG 0.519906 4.4:-21600842 None:intergenic
TCATGTGTTTCTTTAATGGA+GGG 0.521862 4.4:+21601691 MS.gene053617:CDS
GCTGCAGACAACAAGAGTCT+TGG 0.523262 4.4:+21603756 MS.gene053617:CDS
TTCATGTGTTTCTTTAATGG+AGG 0.523829 4.4:+21601690 MS.gene053617:CDS
TCAGACTCAAGTGGGTATCA+AGG 0.524218 4.4:+21603710 MS.gene053617:CDS
ATGAGGTTCTTCTCGTCGGA+GGG 0.525590 4.4:+21602812 MS.gene053617:CDS
GAAACTGCTGAGGCATACCT+TGG 0.527311 4.4:+21602108 MS.gene053617:CDS
CATCATATGCAGCTCAAAAG+TGG 0.528387 4.4:+21601505 MS.gene053617:CDS
TCCTGATGAGGCTGTTGCAA+TGG 0.529665 4.4:+21602906 MS.gene053617:CDS
GTTGCATGCTCAGAGAGATC+AGG 0.532569 4.4:+21603974 MS.gene053617:CDS
GATTTGAGAACGGCTATAGC+AGG 0.533055 4.4:+21604125 MS.gene053617:CDS
GACTCGTGTACCTAAAGTGC+AGG 0.535807 4.4:+21602837 MS.gene053617:CDS
TTGTAGGAATTGTTGTGTTG+CGG 0.536039 4.4:-21603047 None:intergenic
CCTGATGAGGCTGTTGCAAT+GGG 0.536816 4.4:+21602907 MS.gene053617:CDS
TATGGGATGAACAGCAAAGA+GGG 0.537258 4.4:+21602270 MS.gene053617:CDS
TGGGTATCAAGGTGCTCCAA+GGG 0.538510 4.4:+21603721 MS.gene053617:CDS
GATGTCACTCCTCTATCCCT+GGG 0.540459 4.4:+21602985 MS.gene053617:CDS
GGCAAACCTCTTGGGGCAGG+AGG 0.540636 4.4:-21603801 None:intergenic
AAAGTTATTGAGAATTCTGA+AGG 0.542496 4.4:+21601808 MS.gene053617:CDS
CTGGGTATTGAGACTTTGGG+TGG 0.543172 4.4:+21603003 MS.gene053617:CDS
AATTCTCAGCACTTCAAGAC+CGG 0.543184 4.4:-21602217 None:intergenic
GTTGGTTACAGCCTGACGCT+TGG 0.547556 4.4:-21601896 None:intergenic
GGCACCCAATGGAGATGCAT+GGG 0.549734 4.4:+21602020 MS.gene053617:CDS
GATGGAGGTTCTCCAGGTGG+TGG 0.550859 4.4:+21604248 MS.gene053617:CDS
TTGAGAATTCTGAAGGAGCT+CGG 0.556650 4.4:+21601815 MS.gene053617:CDS
GGAGCCTGTTCACCACCACC+TGG 0.557888 4.4:-21604260 None:intergenic
GTTGATGAGGTTCTTCTCGT+CGG 0.558124 4.4:+21602808 MS.gene053617:CDS
ATCATATGCAGCTCAAAAGT+GGG 0.564862 4.4:+21601506 MS.gene053617:CDS
CATATGTCAGGTGGGTCAAG+TGG 0.568288 4.4:+21604215 MS.gene053617:CDS
TCTTTCAAGCAGCTCTTACA+GGG 0.569460 4.4:-21602763 None:intergenic
TCTGCCAAAGACAAATCCAC+TGG 0.570529 4.4:+21603873 MS.gene053617:CDS
GTGGGTATCAAGGTGCTCCA+AGG 0.570815 4.4:+21603720 MS.gene053617:CDS
GATGAGGTTCTTCTCGTCGG+AGG 0.572161 4.4:+21602811 MS.gene053617:CDS
GATATTCAAATGCTTTGCAC+CGG 0.572709 4.4:-21602680 None:intergenic
GGCATTCCTCCTGCCCCAAG+AGG 0.573254 4.4:+21603795 MS.gene053617:CDS
AATCTGAGGCAAACCTCTTG+GGG 0.574961 4.4:-21603808 None:intergenic
ATATGAAAGTGCAGCTGCAG+TGG 0.575044 4.4:-21602250 None:intergenic
AGGCACCCAATGGAGATGCA+TGG 0.577576 4.4:+21602019 MS.gene053617:CDS
AGGATAAGCTTGCGTTGCAG+AGG 0.578244 4.4:+21602569 MS.gene053617:CDS
GGCAAAACAAAGCACCTGAA+AGG 0.578986 4.4:-21601543 None:intergenic
AGGCAGGCAACAAAAGATGC+TGG 0.579182 4.4:+21602186 MS.gene053617:CDS
TCCCAAGAAAGTGTCACCAT+TGG 0.580142 4.4:-21602470 None:intergenic
GATTCCTAGTGAGGTTGCGA+AGG 0.581066 4.4:+21604082 MS.gene053617:CDS
AATCGAGTAGATTGATGTGT+CGG 0.581607 4.4:-21604030 None:intergenic
TGGTGGTGAACAGGCTCCAG+AGG 0.582066 4.4:+21604265 MS.gene053617:CDS
TGGTTGAAGGCAACCACTGA+TGG 0.582430 4.4:-21601844 None:intergenic
AATGGTGACACTTTCTTGGG+AGG 0.584699 4.4:+21602472 MS.gene053617:CDS
CATCAGCAGTGATGAAAGGA+AGG 0.584878 4.4:-21602654 None:intergenic
ACAAAAGCACCAATTTGGCT+GGG 0.595143 4.4:-21602069 None:intergenic
ATCTATCAAGGATGTTGATG+AGG 0.595284 4.4:+21602795 MS.gene053617:CDS
TGTACCTAAAGTGCAGGAGG+TGG 0.596493 4.4:+21602843 MS.gene053617:CDS
GTGGTTGCCTTCAACCAGAA+AGG 0.597350 4.4:+21601850 MS.gene053617:CDS
GATGCATCAGCAGTGATGAA+AGG 0.598218 4.4:-21602658 None:intergenic
CGATCGAAAGGCAGAGACAG+AGG 0.598907 4.4:-21600881 None:intergenic
AGCTCGGACAACACCATCAG+TGG 0.601686 4.4:+21601831 MS.gene053617:CDS
TATGAAAGTGCAGCTGCAGT+GGG 0.601744 4.4:-21602249 None:intergenic
AAGATTGTCAAGGCACCCAA+TGG 0.601896 4.4:+21602009 MS.gene053617:CDS
CACCCAAAGTCTCAATACCC+AGG 0.604506 4.4:-21603002 None:intergenic
ACCTGGAGAACCTCCATCAG+AGG 0.605516 4.4:-21604243 None:intergenic
CCAATAACATCACTACCAGC+AGG 0.608458 4.4:-21601646 None:intergenic
GGGCAGGAGGAATGCCAACA+AGG 0.608917 4.4:-21603788 None:intergenic
TGCGAAGGAAATTGAAGATG+CGG 0.608991 4.4:+21604097 MS.gene053617:CDS
ATTGGTCAGCATATGTCAGG+TGG 0.609221 4.4:+21604206 MS.gene053617:CDS
AGAGACAGTAACAATCCCAT+TGG 0.610713 4.4:-21603853 None:intergenic
ATAGAGATTTACCGATCGAA+AGG 0.613056 4.4:-21600893 None:intergenic
GAGTCCTCCTGATGAGCGGA+TGG 0.614772 4.4:-21603913 None:intergenic
TTTCAGGTGAAAGCTACCAA+TGG 0.616098 4.4:+21602454 MS.gene053617:intron
AGTGGAGGTTCCTCTGATGG+AGG 0.616462 4.4:+21604233 MS.gene053617:CDS
AGCTGACAATCAGACTCAAG+TGG 0.624033 4.4:+21603701 MS.gene053617:CDS
ATGTCAGGTGGGTCAAGTGG+AGG 0.625917 4.4:+21604218 MS.gene053617:CDS
ATGCTGACCAATCTTTGACA+CGG 0.628232 4.4:-21604195 None:intergenic
ACCCAAAGTCTCAATACCCA+GGG 0.628381 4.4:-21603001 None:intergenic
CTGAGAGTCCTCCTGATGAG+CGG 0.628649 4.4:-21603917 None:intergenic
TAGGGAAAAGATTCCTAGTG+AGG 0.630551 4.4:+21604073 MS.gene053617:CDS
ATTACCATCCGCTCATCAGG+AGG 0.634993 4.4:+21603909 MS.gene053617:CDS
CAGAGGAAGAAGCAAGATCG+CGG 0.635260 4.4:-21600864 None:intergenic
TGATAGTATTGATCTTGCAA+AGG 0.635285 4.4:+21602549 MS.gene053617:CDS
TCTGATGGAGGTTCTCCAGG+TGG 0.636312 4.4:+21604245 MS.gene053617:CDS
TCCAGAGGCAGAGTATGAAG+AGG 0.637119 4.4:+21604280 MS.gene053617:CDS
TTGGTCAGCATATGTCAGGT+GGG 0.640684 4.4:+21604207 MS.gene053617:CDS
GCTGACAATCAGACTCAAGT+GGG 0.641874 4.4:+21603702 MS.gene053617:CDS
TAAGATGAAGGAAACTGCTG+AGG 0.643269 4.4:+21602098 MS.gene053617:CDS
TCAAAAGTGACTTCAATCTG+AGG 0.643584 4.4:-21603822 None:intergenic
ATGTTATTGGAATTGATTTG+GGG 0.649149 4.4:+21601659 MS.gene053617:CDS
ATGCTCAGAGAGATCAGGAA+AGG 0.649172 4.4:+21603979 MS.gene053617:CDS
CAAAGGAGTAAATCCTGATG+AGG 0.650174 4.4:+21602894 MS.gene053617:CDS
TGCGGTCTCAGATTTGAGAA+CGG 0.650827 4.4:+21604115 MS.gene053617:CDS
TTTGGAAAGAGTCCTAGCAA+AGG 0.662243 4.4:+21602877 MS.gene053617:CDS
TAACCTGATTGAAAGGACAA+AGG 0.662910 4.4:+21602738 MS.gene053617:CDS
GGTACCCTATAAGATTGTCA+AGG 0.671230 4.4:+21601999 MS.gene053617:CDS
TCGTGTACCTAAAGTGCAGG+AGG 0.674141 4.4:+21602840 MS.gene053617:CDS
ATATGGGATGAACAGCAAAG+AGG 0.685497 4.4:+21602269 MS.gene053617:CDS
CTTCAGGGTGGTATTCTCCG+TGG 0.686079 4.4:+21602937 MS.gene053617:CDS
ATGGGATGAACAGCAAAGAG+GGG 0.688004 4.4:+21602271 MS.gene053617:CDS
AGGAAGAAGCAAGATCGCGG+CGG 0.707753 4.4:-21600861 None:intergenic
GGGTATCAAGGTGCTCCAAG+GGG 0.712553 4.4:+21603722 MS.gene053617:CDS
CTTACTTCAATGATGCTCAG+AGG 0.714640 4.4:+21602166 MS.gene053617:CDS
ATGGGAGCAGCTCTTCAGGG+TGG 0.716807 4.4:+21602925 MS.gene053617:CDS
GCAGCTCTTTAACATCACCA+CGG 0.761484 4.4:-21602954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATGAAAAATTAGAC+TGG - chr4.4:21601321-21601340 None:intergenic 15.0%
!! AGATGATGAAATTAATAATA+TGG + chr4.4:21603938-21603957 MS.gene053617:CDS 15.0%
!! ATTTAAAAATAAAATCTGCT+TGG + chr4.4:21603346-21603365 MS.gene053617:intron 15.0%
!! TACATTAAATAAATCTGAAT+AGG - chr4.4:21603631-21603650 None:intergenic 15.0%
!!! TTCTGTTTTATTCAATAAAA+AGG + chr4.4:21603451-21603470 MS.gene053617:intron 15.0%
!!! TTTTTCTTAAAAACAGTTTT+TGG - chr4.4:21603326-21603345 None:intergenic 15.0%
!! AATAATAACTGTTGATATCA+TGG + chr4.4:21601365-21601384 MS.gene053617:intron 20.0%
!! ACATAATTATTCCTAATGAT+AGG - chr4.4:21602412-21602431 None:intergenic 20.0%
!! ATTAGGAATAATTATGTAAG+TGG + chr4.4:21602415-21602434 MS.gene053617:intron 20.0%
!! TCAGATTTATTTAATGTAAC+AGG + chr4.4:21603633-21603652 MS.gene053617:intron 20.0%
!!! AATTTTGAAATCATTGTTTC+AGG + chr4.4:21603665-21603684 MS.gene053617:intron 20.0%
!!! TCCATTTTAGAAATTTCAAA+CGG + chr4.4:21602336-21602355 MS.gene053617:CDS 20.0%
! AAACCAAAATAAAACCAAAC+AGG - chr4.4:21603274-21603293 None:intergenic 25.0%
! AAAGTTATTGAGAATTCTGA+AGG + chr4.4:21601808-21601827 MS.gene053617:CDS 25.0%
! ATCTTTCTTAACCTATCATT+AGG + chr4.4:21602398-21602417 MS.gene053617:intron 25.0%
! CAATAAAAAGGAAATCAAAC+AGG + chr4.4:21603463-21603482 MS.gene053617:intron 25.0%
! CAATTCATGTGTTTCTTTAA+TGG + chr4.4:21601687-21601706 MS.gene053617:CDS 25.0%
! CATTAAAGAAACACATGAAT+TGG - chr4.4:21601689-21601708 None:intergenic 25.0%
! GAAAACAAAAGAGAAATCTA+GGG - chr4.4:21603489-21603508 None:intergenic 25.0%
! GAATAGTGAATCAATAAAAC+AGG - chr4.4:21603513-21603532 None:intergenic 25.0%
! TAATGATAGGTTAAGAAAGA+TGG - chr4.4:21602399-21602418 None:intergenic 25.0%
! TCAGAATTCTCAATAACTTT+AGG - chr4.4:21601808-21601827 None:intergenic 25.0%
! TGATGTTATTGGAATTGATT+TGG + chr4.4:21601657-21601676 MS.gene053617:CDS 25.0%
!! ACCGTTTGAAATTTCTAAAA+TGG - chr4.4:21602340-21602359 None:intergenic 25.0%
!! GATGTTATTGGAATTGATTT+GGG + chr4.4:21601658-21601677 MS.gene053617:CDS 25.0%
!! TCACTGATAACATATTTTTC+AGG + chr4.4:21602438-21602457 MS.gene053617:intron 25.0%
!! TCTTCAATGTTTTATGAGTT+AGG + chr4.4:21600961-21600980 MS.gene053617:intron 25.0%
!! TTTTGTTCTTACTAAGATGA+AGG + chr4.4:21602086-21602105 MS.gene053617:CDS 25.0%
!!! AGAATTGTTTTCTATTTCTG+AGG + chr4.4:21603126-21603145 MS.gene053617:intron 25.0%
!!! AGATTTTGATAATGCTTTGT+TGG + chr4.4:21602498-21602517 MS.gene053617:CDS 25.0%
!!! AGTAAGATACTTTTTTTGGA+GGG - chr4.4:21603206-21603225 None:intergenic 25.0%
!!! ATAACTTTAGGATTCTGAAA+AGG - chr4.4:21601796-21601815 None:intergenic 25.0%
!!! ATGTTATTGGAATTGATTTG+GGG + chr4.4:21601659-21601678 MS.gene053617:CDS 25.0%
!!! CTTTAGAAATTGTTTTTCCA+AGG - chr4.4:21602128-21602147 None:intergenic 25.0%
!!! GTAACATGTAGATTTTGAAA+AGG + chr4.4:21603547-21603566 MS.gene053617:intron 25.0%
!!! TAACTTTAGGATTCTGAAAA+GGG - chr4.4:21601795-21601814 None:intergenic 25.0%
!!! TGTCAGTAAGATACTTTTTT+TGG - chr4.4:21603210-21603229 None:intergenic 25.0%
!!! TTTTGAAAAGGAAATCAAAC+AGG + chr4.4:21603559-21603578 MS.gene053617:intron 25.0%
AACACAAAAGGAGATGAAAA+TGG + chr4.4:21601978-21601997 MS.gene053617:CDS 30.0%
AACATCCTTGATAGATATGT+TGG - chr4.4:21602791-21602810 None:intergenic 30.0%
AATATACATGACCCAATGAT+CGG - chr4.4:21601227-21601246 None:intergenic 30.0%
AATTTCAAACGGTGTATTTG+AGG + chr4.4:21602347-21602366 MS.gene053617:CDS 30.0%
ATAAAACAGAAACACCTTCT+AGG - chr4.4:21603442-21603461 None:intergenic 30.0%
ATTGGGTCATGTATATTTGT+TGG + chr4.4:21601230-21601249 MS.gene053617:intron 30.0%
CGAAAACAAAAGAGAAATCT+AGG - chr4.4:21603490-21603509 None:intergenic 30.0%
CTGCAAAACAATCAAAAGAA+AGG - chr4.4:21601466-21601485 None:intergenic 30.0%
GAACCATTGTAAATAACTGA+AGG + chr4.4:21603248-21603267 MS.gene053617:intron 30.0%
GTTCACATAGAATCAGAAAA+AGG + chr4.4:21603410-21603429 MS.gene053617:intron 30.0%
TCATGTGTTTCTTTAATGGA+GGG + chr4.4:21601691-21601710 MS.gene053617:CDS 30.0%
TGATATCATGGTATCATTCA+TGG + chr4.4:21601377-21601396 MS.gene053617:intron 30.0%
TGGTAAATAACCTGATTGAA+AGG + chr4.4:21602731-21602750 MS.gene053617:CDS 30.0%
TTCATGTGTTTCTTTAATGG+AGG + chr4.4:21601690-21601709 MS.gene053617:CDS 30.0%
! AACCCAACAAATACTCTTTT+TGG + chr4.4:21601916-21601935 MS.gene053617:CDS 30.0%
! ATTACCTTTGGACATGTTTT+TGG + chr4.4:21601738-21601757 MS.gene053617:intron 30.0%
! CTATTTCTCTTGATTACCTT+TGG + chr4.4:21601726-21601745 MS.gene053617:intron 30.0%
! TTTTTGTGTTACCGATCATT+GGG + chr4.4:21601213-21601232 MS.gene053617:intron 30.0%
!! AAAAAGAGTATTTGTTGGGT+TGG - chr4.4:21601917-21601936 None:intergenic 30.0%
!! TAAGAACAAAAGCACCAATT+TGG - chr4.4:21602077-21602096 None:intergenic 30.0%
!! TCTACTTTTCACATAATCTG+TGG + chr4.4:21601135-21601154 MS.gene053617:intron 30.0%
!! TGATAGTATTGATCTTGCAA+AGG + chr4.4:21602549-21602568 MS.gene053617:CDS 30.0%
!! TGCCAAAAAGAGTATTTGTT+GGG - chr4.4:21601921-21601940 None:intergenic 30.0%
!!! CAGTAAGATACTTTTTTTGG+AGG - chr4.4:21603207-21603226 None:intergenic 30.0%
!!! GTAAGATACTTTTTTTGGAG+GGG - chr4.4:21603205-21603224 None:intergenic 30.0%
!!! TTTTTTGTGTTACCGATCAT+TGG + chr4.4:21601212-21601231 MS.gene053617:intron 30.0%
AAAAGAGTTTGAGCGAGTAT+AGG + chr4.4:21604054-21604073 MS.gene053617:CDS 35.0%
AAAGAGTTTGAGCGAGTATA+GGG + chr4.4:21604055-21604074 MS.gene053617:CDS 35.0%
AATCGAGTAGATTGATGTGT+CGG - chr4.4:21604033-21604052 None:intergenic 35.0%
AATTCCTACAAAGAAGAGTC+AGG + chr4.4:21603059-21603078 MS.gene053617:CDS 35.0%
AGACCCAAATGATAGTATCA+CGG - chr4.4:21601163-21601182 None:intergenic 35.0%
AGATGCCAACATATCTATCA+AGG + chr4.4:21602783-21602802 MS.gene053617:CDS 35.0%
AGGCCTTCAGTTATTTACAA+TGG - chr4.4:21603254-21603273 None:intergenic 35.0%
AGTATCTTACTGACATTCCA+AGG + chr4.4:21603215-21603234 MS.gene053617:intron 35.0%
ATAGAGATTTACCGATCGAA+AGG - chr4.4:21600896-21600915 None:intergenic 35.0%
ATCATATGCAGCTCAAAAGT+GGG + chr4.4:21601506-21601525 MS.gene053617:CDS 35.0%
ATCTATCAAGGATGTTGATG+AGG + chr4.4:21602795-21602814 MS.gene053617:CDS 35.0%
ATTACCTGACTCTTCTTTGT+AGG - chr4.4:21603066-21603085 None:intergenic 35.0%
GAAAAAGGATAACACCTAGA+AGG + chr4.4:21603425-21603444 MS.gene053617:intron 35.0%
GATATTCAAATGCTTTGCAC+CGG - chr4.4:21602683-21602702 None:intergenic 35.0%
GTATCTTACTGACATTCCAA+GGG + chr4.4:21603216-21603235 MS.gene053617:intron 35.0%
GTTCCGTGATACTATCATTT+GGG + chr4.4:21601157-21601176 MS.gene053617:intron 35.0%
TAAATAACTGAAGGCCTGTT+TGG + chr4.4:21603257-21603276 MS.gene053617:intron 35.0%
TAACAACCTGTCATTGAACA+TGG - chr4.4:21601284-21601303 None:intergenic 35.0%
TAACCTGATTGAAAGGACAA+AGG + chr4.4:21602738-21602757 MS.gene053617:CDS 35.0%
TCAAAAGTGACTTCAATCTG+AGG - chr4.4:21603825-21603844 None:intergenic 35.0%
TGAGCAAAAATAGTGAAGTG+AGG - chr4.4:21600921-21600940 None:intergenic 35.0%
TGTGTGTTAGGGATGATAAA+AGG + chr4.4:21601186-21601205 MS.gene053617:intron 35.0%
TGTTTCTTTAATGGAGGGAA+AGG + chr4.4:21601696-21601715 MS.gene053617:CDS 35.0%
TTGTAGGAATTGTTGTGTTG+CGG - chr4.4:21603050-21603069 None:intergenic 35.0%
! AATCTGTTGTTCTTTTCCAG+TGG - chr4.4:21603892-21603911 None:intergenic 35.0%
! ACTTTTGACATAGATGCCAA+TGG + chr4.4:21603837-21603856 MS.gene053617:CDS 35.0%
! CTTTTGACATAGATGCCAAT+GGG + chr4.4:21603838-21603857 MS.gene053617:CDS 35.0%
! TGCTTTTGTACTACAGTTCT+AGG + chr4.4:21601623-21601642 MS.gene053617:intron 35.0%
! TTCATCTCCTTTTGTGTTTG+CGG - chr4.4:21601976-21601995 None:intergenic 35.0%
!! GTGCCAAAAAGAGTATTTGT+TGG - chr4.4:21601922-21601941 None:intergenic 35.0%
!! TTGATTGTTTTGCAGTTGAC+AGG + chr4.4:21601471-21601490 MS.gene053617:intron 35.0%
!! TTTTCCAGTGGATTTGTCTT+TGG - chr4.4:21603880-21603899 None:intergenic 35.0%
!!! AGGCCTGTTTGGTTTTATTT+TGG + chr4.4:21603268-21603287 MS.gene053617:intron 35.0%
!!! ATACTTTTTTTGGAGGGGTT+GGG - chr4.4:21603200-21603219 None:intergenic 35.0%
!!! CTCATTGCTGTTTTTGATCT+CGG + chr4.4:21602294-21602313 MS.gene053617:CDS 35.0%
AAAGATGCTGGTAGAATTGC+CGG + chr4.4:21602198-21602217 MS.gene053617:CDS 40.0%
AACAAAGCCGTGTCAAAGAT+TGG + chr4.4:21604188-21604207 MS.gene053617:CDS 40.0%
AATTCTCAGCACTTCAAGAC+CGG - chr4.4:21602220-21602239 None:intergenic 40.0%
ACCAATGGTGACACTTTCTT+GGG + chr4.4:21602469-21602488 MS.gene053617:CDS 40.0%
AGAGACAGTAACAATCCCAT+TGG - chr4.4:21603856-21603875 None:intergenic 40.0%
ATATGGGATGAACAGCAAAG+AGG + chr4.4:21602269-21602288 MS.gene053617:CDS 40.0%
ATCTTTCAAGCAGCTCTTAC+AGG - chr4.4:21602767-21602786 None:intergenic 40.0%
ATGCTGACCAATCTTTGACA+CGG - chr4.4:21604198-21604217 None:intergenic 40.0%
ATGGTTCTCTTCTTTACCCT+TGG - chr4.4:21603235-21603254 None:intergenic 40.0%
CAAAGGAGTAAATCCTGATG+AGG + chr4.4:21602894-21602913 MS.gene053617:CDS 40.0%
CATCATATGCAGCTCAAAAG+TGG + chr4.4:21601505-21601524 MS.gene053617:CDS 40.0%
CTGTTACCATGTTCAATGAC+AGG + chr4.4:21601275-21601294 MS.gene053617:intron 40.0%
CTTACTTCAATGATGCTCAG+AGG + chr4.4:21602166-21602185 MS.gene053617:CDS 40.0%
CTTGGAGAATTTGACCTTGT+TGG + chr4.4:21603774-21603793 MS.gene053617:CDS 40.0%
CTTTAATGGAGGGAAAGGTA+AGG + chr4.4:21601701-21601720 MS.gene053617:intron 40.0%
GGTACCCTATAAGATTGTCA+AGG + chr4.4:21601999-21602018 MS.gene053617:CDS 40.0%
GGTGCCTTGACAATCTTATA+GGG - chr4.4:21602006-21602025 None:intergenic 40.0%
GGTTCCGTGATACTATCATT+TGG + chr4.4:21601156-21601175 MS.gene053617:intron 40.0%
GTTGACTAGATCGAAGTTTG+AGG + chr4.4:21602705-21602724 MS.gene053617:CDS 40.0%
TAAGATGAAGGAAACTGCTG+AGG + chr4.4:21602098-21602117 MS.gene053617:CDS 40.0%
TACCAATGGTGACACTTTCT+TGG + chr4.4:21602468-21602487 MS.gene053617:CDS 40.0%
TAGGGAAAAGATTCCTAGTG+AGG + chr4.4:21604073-21604092 MS.gene053617:CDS 40.0%
TATGGGATGAACAGCAAAGA+GGG + chr4.4:21602270-21602289 MS.gene053617:CDS 40.0%
TCAGGATTTACTCCTTTGCT+AGG - chr4.4:21602892-21602911 None:intergenic 40.0%
TCGCGAAAACGAGAAACTTA+GGG - chr4.4:21603585-21603604 None:intergenic 40.0%
TCTTTCAAGCAGCTCTTACA+GGG - chr4.4:21602766-21602785 None:intergenic 40.0%
TGAGCATCATTGAAGTAAGC+TGG - chr4.4:21602165-21602184 None:intergenic 40.0%
TGATGATCCGCAAACACAAA+AGG + chr4.4:21601966-21601985 MS.gene053617:CDS 40.0%
TGCACCAAAAACATGTCCAA+AGG - chr4.4:21601745-21601764 None:intergenic 40.0%
TGCATAGCGTATCAATCTGT+GGG + chr4.4:21600989-21601008 MS.gene053617:intron 40.0%
TGCCATACAGTACAGAACAA+AGG - chr4.4:21601567-21601586 None:intergenic 40.0%
TGCCTTTGTTCTGTACTGTA+TGG + chr4.4:21601562-21601581 MS.gene053617:intron 40.0%
TGCGAAGGAAATTGAAGATG+CGG + chr4.4:21604097-21604116 MS.gene053617:CDS 40.0%
TGGTATCATTCATGGAACAG+CGG + chr4.4:21601385-21601404 MS.gene053617:intron 40.0%
TGTAGGAATTGTTGTGTTGC+GGG - chr4.4:21603049-21603068 None:intergenic 40.0%
TTGCATAGCGTATCAATCTG+TGG + chr4.4:21600988-21601007 MS.gene053617:intron 40.0%
TTTGGAAAGAGTCCTAGCAA+AGG + chr4.4:21602877-21602896 MS.gene053617:CDS 40.0%
TTTGGCACCAAACGTTTGAT+TGG + chr4.4:21601934-21601953 MS.gene053617:CDS 40.0%
! AAGATTGGTCAGCATATGTC+AGG + chr4.4:21604203-21604222 MS.gene053617:CDS 40.0%
! AAGGGTATAAGCATTAGTCC+AGG - chr4.4:21601777-21601796 None:intergenic 40.0%
! CACTTTTGAGCTGCATATGA+TGG - chr4.4:21601507-21601526 None:intergenic 40.0%
! TAGATCGAAGTTTGAGGCTT+TGG + chr4.4:21602711-21602730 MS.gene053617:CDS 40.0%
! TTGAGAATTCTGAAGGAGCT+CGG + chr4.4:21601815-21601834 MS.gene053617:CDS 40.0%
! TTTCAGGTGAAAGCTACCAA+TGG + chr4.4:21602454-21602473 MS.gene053617:intron 40.0%
!! AACAAAAGCACCAATTTGGC+TGG - chr4.4:21602073-21602092 None:intergenic 40.0%
!! ACAAAAGCACCAATTTGGCT+GGG - chr4.4:21602072-21602091 None:intergenic 40.0%
!!! ATTGCTGTTTTTGATCTCGG+AGG + chr4.4:21602297-21602316 MS.gene053617:CDS 40.0%
!!! GATACTTTTTTTGGAGGGGT+TGG - chr4.4:21603201-21603220 None:intergenic 40.0%
!!! TACTTTTTTTGGAGGGGTTG+GGG - chr4.4:21603199-21603218 None:intergenic 40.0%
!!! TTGGACATGTTTTTGGTGCA+TGG + chr4.4:21601745-21601764 MS.gene053617:intron 40.0%
AACAGTATAGCCAGTCGCAA+AGG - chr4.4:21601260-21601279 None:intergenic 45.0%
AATGGTGACACTTTCTTGGG+AGG + chr4.4:21602472-21602491 MS.gene053617:CDS 45.0%
ACCCAAAGTCTCAATACCCA+GGG - chr4.4:21603004-21603023 None:intergenic 45.0%
ACTGCAGCTGCACTTTCATA+TGG + chr4.4:21602252-21602271 MS.gene053617:CDS 45.0%
AGCTCAAAAGTGGGCAAGTT+TGG + chr4.4:21601515-21601534 MS.gene053617:CDS 45.0%
AGCTGACAATCAGACTCAAG+TGG + chr4.4:21603701-21603720 MS.gene053617:CDS 45.0%
ATGCTCAGAGAGATCAGGAA+AGG + chr4.4:21603979-21603998 MS.gene053617:CDS 45.0%
ATGGGATGAACAGCAAAGAG+GGG + chr4.4:21602271-21602290 MS.gene053617:CDS 45.0%
ATTGGTCAGCATATGTCAGG+TGG + chr4.4:21604206-21604225 MS.gene053617:CDS 45.0%
ATTTCCTTCGCAACCTCACT+AGG - chr4.4:21604089-21604108 None:intergenic 45.0%
CAGTATTCTCCCAGCCAAAT+TGG + chr4.4:21602060-21602079 MS.gene053617:CDS 45.0%
CATCAGCAGTGATGAAAGGA+AGG - chr4.4:21602657-21602676 None:intergenic 45.0%
CCAATAACATCACTACCAGC+AGG - chr4.4:21601649-21601668 None:intergenic 45.0%
CTCGCGAAAACGAGAAACTT+AGG - chr4.4:21603586-21603605 None:intergenic 45.0%
CTGCAGCTGCACTTTCATAT+GGG + chr4.4:21602253-21602272 MS.gene053617:CDS 45.0%
GAGGTGGTTTCAGAGATCTT+TGG + chr4.4:21602859-21602878 MS.gene053617:CDS 45.0%
GATGCATCAGCAGTGATGAA+AGG - chr4.4:21602661-21602680 None:intergenic 45.0%
GATTTGAGAACGGCTATAGC+AGG + chr4.4:21604125-21604144 MS.gene053617:CDS 45.0%
GCACCAAACGTTTGATTGGT+AGG + chr4.4:21601938-21601957 MS.gene053617:CDS 45.0%
GCAGCTCTTTAACATCACCA+CGG - chr4.4:21602957-21602976 None:intergenic 45.0%
GCTGACAATCAGACTCAAGT+GGG + chr4.4:21603702-21603721 MS.gene053617:CDS 45.0%
GGGTGCCTTGACAATCTTAT+AGG - chr4.4:21602007-21602026 None:intergenic 45.0%
GGTTAAGAAAGATGGCAGCA+TGG - chr4.4:21602391-21602410 None:intergenic 45.0%
GGTTGGGGGAGATTTGATTA+AGG - chr4.4:21603184-21603203 None:intergenic 45.0%
GTGCCTTTGTCCTTTCAATC+AGG - chr4.4:21602744-21602763 None:intergenic 45.0%
TCAACCCATGCATCTCCATT+GGG - chr4.4:21602027-21602046 None:intergenic 45.0%
TCAGACTCAAGTGGGTATCA+AGG + chr4.4:21603710-21603729 MS.gene053617:CDS 45.0%
TCTGCCAAAGACAAATCCAC+TGG + chr4.4:21603873-21603892 MS.gene053617:CDS 45.0%
TGCGGTCTCAGATTTGAGAA+CGG + chr4.4:21604115-21604134 MS.gene053617:CDS 45.0%
TGTTGGATTACCTTTGCGAC+TGG + chr4.4:21601247-21601266 MS.gene053617:intron 45.0%
TTCAACCCATGCATCTCCAT+TGG - chr4.4:21602028-21602047 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+CGG + chr4.4:21602661-21602680 MS.gene053617:CDS 45.0%
TTGGGTCTCTGTGTGTGTTA+GGG + chr4.4:21601175-21601194 MS.gene053617:intron 45.0%
TTGGTCAGCATATGTCAGGT+GGG + chr4.4:21604207-21604226 MS.gene053617:CDS 45.0%
TTTGGGTCTCTGTGTGTGTT+AGG + chr4.4:21601174-21601193 MS.gene053617:intron 45.0%
! AAGATTGTCAAGGCACCCAA+TGG + chr4.4:21602009-21602028 MS.gene053617:CDS 45.0%
! AATCTGAGGCAAACCTCTTG+GGG - chr4.4:21603811-21603830 None:intergenic 45.0%
! AGATCTGTGAATCTGAGACG+TGG + chr4.4:21601070-21601089 MS.gene053617:intron 45.0%
! ATATGAAAGTGCAGCTGCAG+TGG - chr4.4:21602253-21602272 None:intergenic 45.0%
! CAATCTGAGGCAAACCTCTT+GGG - chr4.4:21603812-21603831 None:intergenic 45.0%
! CCTGCTGGTAGTGATGTTAT+TGG + chr4.4:21601646-21601665 MS.gene053617:CDS 45.0%
! GGCAAAACAAAGCACCTGAA+AGG - chr4.4:21601546-21601565 None:intergenic 45.0%
! GTTGATGAGGTTCTTCTCGT+CGG + chr4.4:21602808-21602827 MS.gene053617:CDS 45.0%
! TATGAAAGTGCAGCTGCAGT+GGG - chr4.4:21602252-21602271 None:intergenic 45.0%
! TCAATCTGAGGCAAACCTCT+TGG - chr4.4:21603813-21603832 None:intergenic 45.0%
!! ATCCCTGGGTATTGAGACTT+TGG + chr4.4:21602999-21603018 MS.gene053617:CDS 45.0%
!! TCCCAAGAAAGTGTCACCAT+TGG - chr4.4:21602473-21602492 None:intergenic 45.0%
!! TCCCTGGGTATTGAGACTTT+GGG + chr4.4:21603000-21603019 MS.gene053617:CDS 45.0%
!! TTTGGTGCATGGTTTTTGCC+TGG + chr4.4:21601756-21601775 MS.gene053617:intron 45.0%
!!! ACTTTTTTTGGAGGGGTTGG+GGG - chr4.4:21603198-21603217 None:intergenic 45.0%
ACCTCTTCATACTCTGCCTC+TGG - chr4.4:21604284-21604303 None:intergenic 50.0%
AGATGTCACTCCTCTATCCC+TGG + chr4.4:21602984-21603003 MS.gene053617:CDS 50.0%
AGGATAAGCTTGCGTTGCAG+AGG + chr4.4:21602569-21602588 MS.gene053617:CDS 50.0%
AGGCAGGCAACAAAAGATGC+TGG + chr4.4:21602186-21602205 MS.gene053617:CDS 50.0%
ATGAGGTTCTTCTCGTCGGA+GGG + chr4.4:21602812-21602831 MS.gene053617:CDS 50.0%
ATTACCATCCGCTCATCAGG+AGG + chr4.4:21603909-21603928 MS.gene053617:CDS 50.0%
CAACAAGCAGCTCTCCTTTC+TGG - chr4.4:21601867-21601886 None:intergenic 50.0%
CACCCAAAGTCTCAATACCC+AGG - chr4.4:21603005-21603024 None:intergenic 50.0%
CAGAAAGGAGAGCTGCTTGT+TGG + chr4.4:21601865-21601884 MS.gene053617:CDS 50.0%
CAGAGGAAGAAGCAAGATCG+CGG - chr4.4:21600867-21600886 None:intergenic 50.0%
CAGATTACCATCCGCTCATC+AGG + chr4.4:21603906-21603925 MS.gene053617:CDS 50.0%
CATATGTCAGGTGGGTCAAG+TGG + chr4.4:21604215-21604234 MS.gene053617:CDS 50.0%
CCTGATGAGGCTGTTGCAAT+GGG + chr4.4:21602907-21602926 MS.gene053617:CDS 50.0%
CTCTGTCTCTGCCTTTCGAT+CGG + chr4.4:21600882-21600901 MS.gene053617:CDS 50.0%
CTTCAATGATGCTCAGAGGC+AGG + chr4.4:21602170-21602189 MS.gene053617:CDS 50.0%
GAAACCACCTCCTGCACTTT+AGG - chr4.4:21602850-21602869 None:intergenic 50.0%
GAAACTGCTGAGGCATACCT+TGG + chr4.4:21602108-21602127 MS.gene053617:CDS 50.0%
GACTCGTGTACCTAAAGTGC+AGG + chr4.4:21602837-21602856 MS.gene053617:CDS 50.0%
GATGTCACTCCTCTATCCCT+GGG + chr4.4:21602985-21603004 MS.gene053617:CDS 50.0%
GATTCCTAGTGAGGTTGCGA+AGG + chr4.4:21604082-21604101 MS.gene053617:CDS 50.0%
GCGCCTACCAATCAAACGTT+TGG - chr4.4:21601944-21601963 None:intergenic 50.0%
GCTGCAGACAACAAGAGTCT+TGG + chr4.4:21603756-21603775 MS.gene053617:CDS 50.0%
GGGATAGAGGAGTGACATCT+AGG - chr4.4:21602984-21603003 None:intergenic 50.0%
GTCTCAATACCCAGGGATAG+AGG - chr4.4:21602997-21603016 None:intergenic 50.0%
GTGGTTGCCTTCAACCAGAA+AGG + chr4.4:21601850-21601869 MS.gene053617:CDS 50.0%
GTTGCATGCTCAGAGAGATC+AGG + chr4.4:21603974-21603993 MS.gene053617:CDS 50.0%
TCAAGTGGAGGTTCCTCTGA+TGG + chr4.4:21604230-21604249 MS.gene053617:CDS 50.0%
TCCAGAGGCAGAGTATGAAG+AGG + chr4.4:21604280-21604299 MS.gene053617:CDS 50.0%
TCCTGATGAGGCTGTTGCAA+TGG + chr4.4:21602906-21602925 MS.gene053617:CDS 50.0%
TCGTGTACCTAAAGTGCAGG+AGG + chr4.4:21602840-21602859 MS.gene053617:CDS 50.0%
TGGTTGAAGGCAACCACTGA+TGG - chr4.4:21601847-21601866 None:intergenic 50.0%
TGTACCTAAAGTGCAGGAGG+TGG + chr4.4:21602843-21602862 MS.gene053617:CDS 50.0%
! CAAGTTTGGCTCGACCTTTC+AGG + chr4.4:21601529-21601548 MS.gene053617:CDS 50.0%
! TGGGTATCAAGGTGCTCCAA+GGG + chr4.4:21603721-21603740 MS.gene053617:CDS 50.0%
!! CAGCTCTCCTTTCTGGTTGA+AGG - chr4.4:21601860-21601879 None:intergenic 50.0%
!! CTGGGTATTGAGACTTTGGG+TGG + chr4.4:21603003-21603022 MS.gene053617:CDS 50.0%
!! TACTACAGTTCTAGGCCTGC+TGG + chr4.4:21601631-21601650 MS.gene053617:intron 50.0%
!!! GCTGTTTTTGATCTCGGAGG+TGG + chr4.4:21602300-21602319 MS.gene053617:CDS 50.0%
ACCTGGAGAACCTCCATCAG+AGG - chr4.4:21604246-21604265 None:intergenic 55.0%
AGCTCGGACAACACCATCAG+TGG + chr4.4:21601831-21601850 MS.gene053617:CDS 55.0%
AGGAAGAAGCAAGATCGCGG+CGG - chr4.4:21600864-21600883 None:intergenic 55.0%
AGGCACCCAATGGAGATGCA+TGG + chr4.4:21602019-21602038 MS.gene053617:CDS 55.0%
AGTGGAGGTTCCTCTGATGG+AGG + chr4.4:21604233-21604252 MS.gene053617:CDS 55.0%
ATGTCAGGTGGGTCAAGTGG+AGG + chr4.4:21604218-21604237 MS.gene053617:CDS 55.0%
CCCATTGCAACAGCCTCATC+AGG - chr4.4:21602910-21602929 None:intergenic 55.0%
CGATCGAAAGGCAGAGACAG+AGG - chr4.4:21600884-21600903 None:intergenic 55.0%
CTGAGAGTCCTCCTGATGAG+CGG - chr4.4:21603920-21603939 None:intergenic 55.0%
CTTCAGGGTGGTATTCTCCG+TGG + chr4.4:21602937-21602956 MS.gene053617:CDS 55.0%
GATGAGGTTCTTCTCGTCGG+AGG + chr4.4:21602811-21602830 MS.gene053617:CDS 55.0%
GCAATGGGAGCAGCTCTTCA+GGG + chr4.4:21602922-21602941 MS.gene053617:CDS 55.0%
GGCACCCAATGGAGATGCAT+GGG + chr4.4:21602020-21602039 MS.gene053617:CDS 55.0%
GTTGGTTACAGCCTGACGCT+TGG - chr4.4:21601899-21601918 None:intergenic 55.0%
TCCTCTGATGGAGGTTCTCC+AGG + chr4.4:21604242-21604261 MS.gene053617:CDS 55.0%
TCTGATGGAGGTTCTCCAGG+TGG + chr4.4:21604245-21604264 MS.gene053617:CDS 55.0%
TGCAATGGGAGCAGCTCTTC+AGG + chr4.4:21602921-21602940 MS.gene053617:CDS 55.0%
! GGGTATCAAGGTGCTCCAAG+GGG + chr4.4:21603722-21603741 MS.gene053617:CDS 55.0%
! GTGGGTATCAAGGTGCTCCA+AGG + chr4.4:21603720-21603739 MS.gene053617:CDS 55.0%
! TTCTCCAGGTGGTGGTGAAC+AGG + chr4.4:21604256-21604275 MS.gene053617:CDS 55.0%
ATGGGAGCAGCTCTTCAGGG+TGG + chr4.4:21602925-21602944 MS.gene053617:CDS 60.0%
CAGCCATTTCACGCTCCCCT+TGG - chr4.4:21603740-21603759 None:intergenic 60.0%
GAGTCCTCCTGATGAGCGGA+TGG - chr4.4:21603916-21603935 None:intergenic 60.0%
GATGGAGGTTCTCCAGGTGG+TGG + chr4.4:21604248-21604267 MS.gene053617:CDS 60.0%
GGGCAGGAGGAATGCCAACA+AGG - chr4.4:21603791-21603810 None:intergenic 60.0%
GTTACAGCCTGACGCTTGGC+AGG - chr4.4:21601895-21601914 None:intergenic 60.0%
TGAGGCAAACCTCTTGGGGC+AGG - chr4.4:21603807-21603826 None:intergenic 60.0%
TGGTACACCTGCCAAGCGTC+AGG + chr4.4:21601885-21601904 MS.gene053617:CDS 60.0%
! GCTCCAAGGGGAGCGTGAAA+TGG + chr4.4:21603734-21603753 MS.gene053617:CDS 60.0%
! TGGTGGTGAACAGGCTCCAG+AGG + chr4.4:21604265-21604284 MS.gene053617:CDS 60.0%
CAAGATCGCGGCGGAGAGCA+CGG - chr4.4:21600855-21600874 None:intergenic 65.0%
GGAGCCTGTTCACCACCACC+TGG - chr4.4:21604263-21604282 None:intergenic 65.0%
GGCAAACCTCTTGGGGCAGG+AGG - chr4.4:21603804-21603823 None:intergenic 65.0%
GGCATTCCTCCTGCCCCAAG+AGG + chr4.4:21603795-21603814 MS.gene053617:CDS 65.0%
! GAGAGCACGGCGCAAGACGG+CGG - chr4.4:21600842-21600861 None:intergenic 70.0%
! GCGGAGAGCACGGCGCAAGA+CGG - chr4.4:21600845-21600864 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 21600835 21604313 21600835 ID=MS.gene053617
chr4.4 mRNA 21600835 21604313 21600835 ID=MS.gene053617.t1;Parent=MS.gene053617
chr4.4 exon 21600835 21600903 21600835 ID=MS.gene053617.t1.exon1;Parent=MS.gene053617.t1
chr4.4 CDS 21600835 21600903 21600835 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
chr4.4 exon 21601486 21601550 21601486 ID=MS.gene053617.t1.exon2;Parent=MS.gene053617.t1
chr4.4 CDS 21601486 21601550 21601486 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
chr4.4 exon 21601639 21601717 21601639 ID=MS.gene053617.t1.exon3;Parent=MS.gene053617.t1
chr4.4 CDS 21601639 21601717 21601639 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
chr4.4 exon 21601802 21602368 21601802 ID=MS.gene053617.t1.exon4;Parent=MS.gene053617.t1
chr4.4 CDS 21601802 21602368 21601802 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
chr4.4 exon 21602460 21603080 21602460 ID=MS.gene053617.t1.exon5;Parent=MS.gene053617.t1
chr4.4 CDS 21602460 21603080 21602460 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
chr4.4 exon 21603687 21604313 21603687 ID=MS.gene053617.t1.exon6;Parent=MS.gene053617.t1
chr4.4 CDS 21603687 21604313 21603687 ID=cds.MS.gene053617.t1;Parent=MS.gene053617.t1
Gene Sequence

>MS.gene053617

ATGGCCGCCGTCTTGCGCCGTGCTCTCCGCCGCGATCTTGCTTCTTCCTCTGTCTCTGCCTTTCGATCGGTAAATCTCTATTGCCTCACTTCACTATTTTTGCTCATTTATTGTGTTATAGATTTATCTTCAATGTTTTATGAGTTAGGTTATTTGCATAGCGTATCAATCTGTGGGTTTTGCTTAAATTGTTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCGATTTTAAGATCTGTGAATCTGAGACGTGGTTCTGTGAATCTGAGACGTGAATCTGAAAAAAGTTTATTTTTTCTACTTTTCACATAATCTGTGGTTCCGTGATACTATCATTTGGGTCTCTGTGTGTGTTAGGGATGATAAAAGGTAATTTTTTGTGTTACCGATCATTGGGTCATGTATATTTGTTGGATTACCTTTGCGACTGGCTATACTGTTACCATGTTCAATGACAGGTTGTTACTGCTTTGTTGCATCCAGTCTAATTTTTCATAATTTTATAATTGATTCTTGTATTGTGACTAATAATAACTGTTGATATCATGGTATCATTCATGGAACAGCGGTTGTTAGATTTGTTTTAGTCTTGTATGTAATGAGCATTGTTCAGAAGATAATTTTCCTTTCTTTTGATTGTTTTGCAGTTGACAGGCAGCACGAAGCCATCATATGCAGCTCAAAAGTGGGCAAGTTTGGCTCGACCTTTCAGGTGCTTTGTTTTGCCTTTGTTCTGTACTGTATGGCAGTTTCAATTTTTCATCAAATTTGCTTATTGTAAAATTGCTTTTGTACTACAGTTCTAGGCCTGCTGGTAGTGATGTTATTGGAATTGATTTGGGGACTACCAATTCATGTGTTTCTTTAATGGAGGGAAAGGTAAGGCTCTATTTCTCTTGATTACCTTTGGACATGTTTTTGGTGCATGGTTTTTGCCTGGACTAATGCTTATACCCTTTTCAGAATCCTAAAGTTATTGAGAATTCTGAAGGAGCTCGGACAACACCATCAGTGGTTGCCTTCAACCAGAAAGGAGAGCTGCTTGTTGGTACACCTGCCAAGCGTCAGGCTGTAACCAACCCAACAAATACTCTTTTTGGCACCAAACGTTTGATTGGTAGGCGCTTTGATGATCCGCAAACACAAAAGGAGATGAAAATGGTACCCTATAAGATTGTCAAGGCACCCAATGGAGATGCATGGGTTGAAATCAATAAGCAGCAGTATTCTCCCAGCCAAATTGGTGCTTTTGTTCTTACTAAGATGAAGGAAACTGCTGAGGCATACCTTGGAAAAACAATTTCTAAAGCTGTAGTTACTGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCCGGTCTTGAAGTGCTGAGAATTATCAATGAGCCCACTGCAGCTGCACTTTCATATGGGATGAACAGCAAAGAGGGGCTCATTGCTGTTTTTGATCTCGGAGGTGGAACATTTGATGTGTCCATTTTAGAAATTTCAAACGGTGTATTTGAGGTATGAACACTTATTTCTTCCATGCTGCCATCTTTCTTAACCTATCATTAGGAATAATTATGTAAGTGGTCACTGATAACATATTTTTCAGGTGAAAGCTACCAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGATAATGCTTTGTTGGACTTTCTAGTAAGTGAATTCAAGAGAACTGATAGTATTGATCTTGCAAAGGATAAGCTTGCGTTGCAGAGGCTTCGAGAAGCTGCTGAGAAAGCAAAAATAGAACTCTCTTCAACTTCACAAACTGAAATAAACCTTCCTTTCATCACTGCTGATGCATCCGGTGCAAAGCATTTGAATATCACGTTGACTAGATCGAAGTTTGAGGCTTTGGTAAATAACCTGATTGAAAGGACAAAGGCACCCTGTAAGAGCTGCTTGAAAGATGCCAACATATCTATCAAGGATGTTGATGAGGTTCTTCTCGTCGGAGGGATGACTCGTGTACCTAAAGTGCAGGAGGTGGTTTCAGAGATCTTTGGAAAGAGTCCTAGCAAAGGAGTAAATCCTGATGAGGCTGTTGCAATGGGAGCAGCTCTTCAGGGTGGTATTCTCCGTGGTGATGTTAAAGAGCTGCTACTCCTAGATGTCACTCCTCTATCCCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCTCCCGCAACACAACAATTCCTACAAAGAAGAGTCAGGTAATTTTAATTACTCAAGACAACTTTTTTATAAACATTTACTTAAGAATTGTTTTCTATTTCTGAGGAAGTAATGTAGCATTGAATCACACAATTATTTCCTTAATCAAATCTCCCCCAACCCCTCCAAAAAAAGTATCTTACTGACATTCCAAGGGTAAAGAAGAGAACCATTGTAAATAACTGAAGGCCTGTTTGGTTTTATTTTGGTTTATAGTTTTTAAATGCTCTTTTGCAAAATTCCAAAAACTGTTTTTAAGAAAAAATTTAAAAATAAAATCTGCTTGGTAATTTGAAACAGCAATACGATTACGATTTTAATGTAGTTTGTTCACATAGAATCAGAAAAAGGATAACACCTAGAAGGTGTTTCTGTTTTATTCAATAAAAAGGAAATCAAACAGGCCCTAGATTTCTCTTTTGTTTTCGCCTGTTTTATTGATTCACTATTCAGATTTTTTTTAATGTAACATGTAGATTTTGAAAAGGAAATCAAACAGGCCCTAAGTTTCTCGTTTTCGCGAGTTTTATCATTTCAGATGTTTATCCTATTCAGATTTATTTAATGTAACAGGTATATTCTTAATTTTGAAATCATTGTTTCAGGTGTTTTCGACAGCAGCTGACAATCAGACTCAAGTGGGTATCAAGGTGCTCCAAGGGGAGCGTGAAATGGCTGCAGACAACAAGAGTCTTGGAGAATTTGACCTTGTTGGCATTCCTCCTGCCCCAAGAGGTTTGCCTCAGATTGAAGTCACTTTTGACATAGATGCCAATGGGATTGTTACTGTCTCTGCCAAAGACAAATCCACTGGAAAAGAACAACAGATTACCATCCGCTCATCAGGAGGACTCTCAGATGATGAAATTAATAATATGGTCAAAGAAGCTGAGTTGCATGCTCAGAGAGATCAGGAAAGGAAAGCACTTATTGATATCAAGAATAGTGCCGACACATCAATCTACTCGATTGAAAAGAGTTTGAGCGAGTATAGGGAAAAGATTCCTAGTGAGGTTGCGAAGGAAATTGAAGATGCGGTCTCAGATTTGAGAACGGCTATAGCAGGAGAAAGTGTTGATGAAATTAAGACAAAACTTGACGCTGCAAACAAAGCCGTGTCAAAGATTGGTCAGCATATGTCAGGTGGGTCAAGTGGAGGTTCCTCTGATGGAGGTTCTCCAGGTGGTGGTGAACAGGCTCCAGAGGCAGAGTATGAAGAGGTCAAGAAGTGA
Protein sequence

>MS.gene053617.t1

MAAVLRRALRRDLASSSVSAFRSLTGSTKPSYAAQKWASLARPFSSRPAGSDVIGIDLGTTNSCVSLMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPYKIVKAPNGDAWVEINKQQYSPSQIGAFVLTKMKETAEAYLGKTISKAVVTVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMNSKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTDSIDLAKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKSLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEINNMVKEAELHAQRDQERKALIDIKNSADTSIYSIEKSLSEYREKIPSEVAKEIEDAVSDLRTAIAGESVDEIKTKLDAANKAVSKIGQHMSGGSSGGSSDGGSPGGGEQAPEAEYEEVKK