AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034372

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034372.t1 MTR_2g087660 99.520 417 2 0 1 417 1 417 0.0 858
MS.gene034372.t1 MTR_4g050420 91.169 419 32 3 1 417 1 416 0.0 686
MS.gene034372.t1 MTR_2g087660 98.726 314 4 0 1 314 1 314 0.0 639
MS.gene034372.t1 MTR_8g006430 70.991 424 115 5 1 417 1 423 0.0 582
MS.gene034372.t1 MTR_7g109340 37.322 351 180 9 14 358 27 343 2.80e-58 194
MS.gene034372.t1 MTR_4g078850 33.333 360 204 10 14 358 5 343 9.01e-51 174
MS.gene034372.t1 MTR_2g104030 32.143 364 221 11 11 357 68 422 3.68e-49 174
MS.gene034372.t1 MTR_4g023470 34.463 354 186 11 14 347 87 414 1.60e-48 171
MS.gene034372.t1 MTR_3g087030 33.144 353 217 9 14 357 83 425 3.15e-48 170
MS.gene034372.t1 MTR_2g090705 32.234 394 154 9 14 358 5 334 3.02e-47 165
MS.gene034372.t1 MTR_2g014470 33.333 360 199 11 14 358 5 338 4.81e-47 164
MS.gene034372.t1 MTR_3g108020 32.213 357 194 7 14 358 5 325 5.63e-46 161
MS.gene034372.t1 MTR_2g014480 34.018 341 199 8 14 343 5 330 2.07e-45 160
MS.gene034372.t1 MTR_4g015840 30.151 398 161 9 14 358 5 338 1.01e-39 145
MS.gene034372.t1 MTR_3g027580 30.645 372 212 15 1 355 80 422 5.67e-39 145
MS.gene034372.t1 MTR_6g471050 30.792 341 210 11 41 365 9 339 1.10e-37 142
MS.gene034372.t1 MTR_5g065160 27.660 376 225 11 1 355 70 419 6.33e-32 126
MS.gene034372.t1 MTR_5g065160 27.957 372 221 11 5 355 75 420 2.28e-31 124
MS.gene034372.t1 MTR_5g065160 27.957 372 221 11 5 355 68 413 3.72e-31 124
MS.gene034372.t1 MTR_4g023490 31.781 365 209 14 14 358 17 361 5.04e-31 122
MS.gene034372.t1 MTR_5g065160 27.957 372 221 11 5 355 75 420 5.36e-31 124
MS.gene034372.t1 MTR_5g037880 36.552 145 90 1 214 358 132 274 7.79e-28 111
MS.gene034372.t1 MTR_5g037880 32.215 149 63 5 11 146 3 126 7.92e-11 62.8
MS.gene034372.t1 MTR_4g015840 36.232 138 86 1 221 358 126 261 1.08e-24 102
MS.gene034372.t1 MTR_3g437840 34.752 141 90 1 218 358 23 161 4.21e-23 95.5
MS.gene034372.t1 MTR_3g088140 34.483 145 92 2 215 358 211 353 8.31e-19 87.4
MS.gene034372.t1 MTR_2g006890 32.639 144 96 1 215 358 233 375 8.77e-18 84.7
MS.gene034372.t1 MTR_3g437850 30.723 166 78 5 14 147 3 163 2.60e-16 76.6
MS.gene034372.t1 MTR_8g037810 46.392 97 43 3 12 104 5 96 3.18e-15 76.6
MS.gene034372.t1 MTR_1g029460 43.878 98 44 4 12 104 5 96 3.39e-14 74.3
MS.gene034372.t1 MTR_5g012530 43.750 80 38 1 10 82 9 88 4.81e-14 74.3
MS.gene034372.t1 MTR_7g101070 52.564 78 31 2 4 76 349 425 5.06e-14 73.9
MS.gene034372.t1 MTR_1g110310 52.941 68 28 1 15 78 18 85 1.07e-13 72.8
MS.gene034372.t1 MTR_1g029470 43.878 98 44 4 12 104 5 96 2.80e-13 71.2
MS.gene034372.t1 MTR_5g004570 40.206 97 49 3 12 104 5 96 1.26e-12 67.8
MS.gene034372.t1 MTR_3g437360 30.534 131 88 3 210 339 206 334 2.89e-12 67.8
MS.gene034372.t1 MTR_5g035770 37.255 102 50 3 15 105 27 125 1.49e-11 66.2
MS.gene034372.t1 MTR_7g112360 40.000 75 37 1 14 80 17 91 4.74e-11 61.6
MS.gene034372.t1 MTR_7g112360 40.000 75 37 1 14 80 17 91 6.38e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034372.t1 AT5G22060 83.055 419 69 2 1 417 1 419 0.0 684
MS.gene034372.t1 AT3G44110 85.036 421 58 3 1 417 1 420 0.0 655
MS.gene034372.t1 AT3G44110 87.651 332 39 2 1 331 1 331 0.0 530
MS.gene034372.t1 AT3G62600 35.775 355 182 11 14 358 27 345 7.55e-56 188
MS.gene034372.t1 AT1G80030 32.964 361 216 10 14 357 76 427 5.33e-53 184
MS.gene034372.t1 AT1G80030 32.964 361 216 10 14 357 76 427 5.33e-53 184
MS.gene034372.t1 AT1G80030 32.964 361 216 10 14 357 76 427 5.33e-53 184
MS.gene034372.t1 AT1G80030 32.964 361 216 10 14 357 76 427 6.73e-53 184
MS.gene034372.t1 AT2G20560 33.711 353 205 8 14 358 5 336 8.01e-50 172
MS.gene034372.t1 AT5G25530 32.597 362 198 9 14 358 5 337 9.08e-48 166
MS.gene034372.t1 AT5G48030 34.167 360 201 13 14 355 95 436 1.02e-47 169
MS.gene034372.t1 AT2G22360 32.075 371 229 10 14 378 87 440 5.65e-47 167
MS.gene034372.t1 AT4G39960 31.198 359 228 9 11 357 83 434 5.94e-45 162
MS.gene034372.t1 AT4G39960 31.198 359 228 9 11 357 83 434 5.94e-45 162
MS.gene034372.t1 AT5G25530 31.892 370 198 10 14 358 5 345 6.69e-45 159
MS.gene034372.t1 AT4G28480 31.198 359 217 8 14 358 5 347 1.25e-44 158
MS.gene034372.t1 AT3G08910 30.789 380 164 9 14 358 5 320 9.36e-40 145
MS.gene034372.t1 AT3G17830 30.303 363 225 10 12 355 62 415 5.31e-38 144
MS.gene034372.t1 AT5G01390 29.517 393 165 11 14 358 5 333 9.13e-38 140
MS.gene034372.t1 AT1G28210 27.895 380 229 11 7 368 42 394 1.06e-33 130
MS.gene034372.t1 AT1G28210 27.895 380 229 11 7 368 42 394 1.48e-33 130
MS.gene034372.t1 AT1G28210 27.895 380 229 11 7 368 42 394 1.81e-33 130
MS.gene034372.t1 AT2G20550 37.241 145 89 1 214 358 141 283 1.05e-26 108
MS.gene034372.t1 AT2G20550 37.241 145 89 1 214 358 141 283 1.05e-26 108
MS.gene034372.t1 AT3G47940 36.552 145 90 1 214 358 204 346 1.79e-26 109
MS.gene034372.t1 AT3G47940 34.021 194 67 4 14 146 5 198 1.11e-20 93.2
MS.gene034372.t1 AT5G01390 35.507 138 87 1 221 358 140 275 1.09e-23 100
MS.gene034372.t1 AT5G01390 40.741 108 43 3 14 100 5 112 1.77e-16 79.7
MS.gene034372.t1 AT4G28480 34.694 147 92 2 212 358 147 289 1.66e-23 100
MS.gene034372.t1 AT4G28480 43.750 112 50 2 14 120 5 108 5.99e-18 84.3
MS.gene034372.t1 AT1G59725 36.957 138 85 1 221 358 193 328 7.36e-23 99.0
MS.gene034372.t1 AT1G59725 32.955 176 75 4 14 146 5 180 4.28e-19 88.2
MS.gene034372.t1 AT1G10350 36.552 145 87 3 214 358 207 346 7.85e-23 99.4
MS.gene034372.t1 AT1G10350 32.308 195 70 6 14 146 5 199 3.66e-19 88.6
MS.gene034372.t1 AT5G01390 35.870 184 70 6 14 149 5 188 7.41e-22 94.0
MS.gene034372.t1 AT1G11040 37.500 136 83 1 215 350 291 424 3.99e-20 92.4
MS.gene034372.t1 AT1G44160 32.593 135 89 1 224 358 221 353 1.69e-17 84.0
MS.gene034372.t1 AT5G01390 40.741 108 43 3 14 100 5 112 9.65e-17 79.7
MS.gene034372.t1 AT2G21510 44.330 97 45 3 12 104 5 96 1.78e-15 77.4
MS.gene034372.t1 AT2G21510 44.330 97 45 3 12 104 5 96 2.48e-15 77.4
MS.gene034372.t1 AT2G21510 44.330 97 45 3 12 104 5 96 2.48e-15 77.4
MS.gene034372.t1 AT2G21510 44.330 97 45 3 12 104 5 96 2.55e-15 77.4
MS.gene034372.t1 AT2G21510 44.330 97 45 3 12 104 5 96 2.55e-15 77.4
MS.gene034372.t1 AT5G05750 41.748 103 46 3 14 102 115 217 4.24e-14 72.8
MS.gene034372.t1 AT4G39150 42.268 97 47 3 12 104 5 96 9.40e-14 72.4
MS.gene034372.t1 AT4G39150 42.268 97 47 3 12 104 5 96 9.40e-14 72.4
MS.gene034372.t1 AT4G39150 42.268 97 47 3 12 104 5 96 9.40e-14 72.4
MS.gene034372.t1 AT1G59980 47.059 68 32 1 15 78 25 92 4.21e-13 70.5
MS.gene034372.t1 AT1G59980 47.059 68 32 1 15 78 25 92 6.33e-13 70.5
MS.gene034372.t1 AT5G03160 50.000 94 40 4 4 92 361 452 1.17e-12 69.7
MS.gene034372.t1 AT1G68370 51.471 68 29 1 15 78 19 86 1.24e-12 69.7
MS.gene034372.t1 AT3G57340 42.424 99 42 3 14 97 114 212 1.44e-12 68.9
MS.gene034372.t1 AT3G57340 42.424 99 42 3 14 97 114 212 1.44e-12 68.9
MS.gene034372.t1 AT3G08970 47.297 74 36 1 15 85 29 102 1.72e-12 69.7
MS.gene034372.t1 AT3G08970 47.297 74 36 1 15 85 29 102 1.72e-12 69.7
MS.gene034372.t1 AT1G24120 37.255 102 50 4 15 105 22 120 3.92e-12 68.2
MS.gene034372.t1 AT3G12170 46.479 71 34 1 8 74 42 112 1.25e-11 65.5
MS.gene034372.t1 AT3G12170 31.707 164 84 6 8 166 6 146 1.25e-11 65.1
MS.gene034372.t1 AT1G21080 39.175 97 49 3 12 104 5 95 2.06e-11 65.9
MS.gene034372.t1 AT1G21080 39.175 97 49 3 12 104 5 95 2.18e-11 65.5
MS.gene034372.t1 AT2G35720 38.824 85 45 1 5 82 7 91 2.74e-11 65.9
MS.gene034372.t1 AT1G74250 44.928 69 29 2 14 73 12 80 3.77e-11 65.5
MS.gene034372.t1 AT5G49060 46.269 67 33 1 11 74 97 163 3.98e-11 64.7
MS.gene034372.t1 AT5G49060 46.269 67 33 1 11 74 97 163 3.98e-11 64.7
MS.gene034372.t1 AT1G76700 39.394 99 51 3 12 106 5 98 6.16e-11 64.3
MS.gene034372.t1 AT4G10130 43.939 66 30 1 14 72 12 77 6.19e-11 61.6
MS.gene034372.t1 AT4G10130 43.939 66 30 1 14 72 12 77 6.19e-11 61.6
MS.gene034372.t1 AT4G10130 43.939 66 30 1 14 72 12 77 6.19e-11 61.6
MS.gene034372.t1 AT4G10130 43.939 66 30 1 14 72 12 77 6.19e-11 61.6
MS.gene034372.t1 AT4G10130 43.939 66 30 1 14 72 12 77 6.19e-11 61.6
MS.gene034372.t1 AT1G56300 41.176 68 32 1 12 71 12 79 7.82e-11 60.8
MS.gene034372.t1 AT5G06910 45.714 70 34 1 9 74 25 94 9.17e-11 62.8

Find 119 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGGTGGAGGTGGATTTCC+TGG 0.267655 2.1:-14269479 MS.gene034372:intron
TCACCCCTTGAAGGTCTCTT+TGG 0.287702 2.1:-14269307 MS.gene034372:CDS
CCAATTTGCGCTGACTCATT+TGG 0.293928 2.1:-14268638 MS.gene034372:CDS
GGAATGGGTGGTGGCGGTGG+TGG 0.294243 2.1:-14269533 MS.gene034372:CDS
TCAGGATCACCACCCTTATC+AGG 0.295880 2.1:+14270280 None:intergenic
CCAAATGAGTCAGCGCAAAT+TGG 0.320936 2.1:+14268638 None:intergenic
TTCACCCTTTCGTTTGAACT+TGG 0.337178 2.1:+14268711 None:intergenic
GAAGATATCTATGAGGCATT+TGG 0.338997 2.1:-14269069 MS.gene034372:CDS
GAAGGAATGGGTGGTGGCGG+TGG 0.340853 2.1:-14269536 MS.gene034372:CDS
ACTAAATACTATGAGATTCT+TGG 0.343941 2.1:-14270370 MS.gene034372:CDS
AACTGAGATACAGGCCTTGC+TGG 0.344090 2.1:+14268318 None:intergenic
CCCCTTGAAGGTCTCTTTGG+AGG 0.348117 2.1:-14269304 MS.gene034372:CDS
TTGCAGCCGGACACAGTTAC+TGG 0.350028 2.1:-14268769 MS.gene034372:intron
CACCACCCATTCCTTCCTTA+AGG 0.353366 2.1:+14269543 None:intergenic
TTAGTGTTATCACTCTTCTT+AGG 0.362823 2.1:+14270388 None:intergenic
TGTGCTGGTTGTCAAGGTTC+TGG 0.368082 2.1:-14269095 MS.gene034372:CDS
TCTTGATCAGGTCAAGGCTT+TGG 0.379949 2.1:-14268352 MS.gene034372:CDS
TTGCATTTGCTGAATCATAT+TGG 0.385235 2.1:+14269043 None:intergenic
ACCACCCATTCCTTCCTTAA+GGG 0.391516 2.1:+14269544 None:intergenic
TACGCTTTCTTCAAATCATC+GGG 0.394989 2.1:+14270328 None:intergenic
CACCCTTTCGTTTGAACTTG+GGG 0.398325 2.1:+14268713 None:intergenic
TCACCCTTTCGTTTGAACTT+GGG 0.404206 2.1:+14268712 None:intergenic
AAGATATCTATGAGGCATTT+GGG 0.411623 2.1:-14269068 MS.gene034372:CDS
ATGAAAGGCCTCTGGTACAT+TGG 0.411721 2.1:+14268426 None:intergenic
TGAGTCTCTGTCTCTTGATC+AGG 0.415051 2.1:-14268364 MS.gene034372:CDS
ACATCCTTGCAATGAATGTA+AGG 0.418761 2.1:-14269021 MS.gene034372:CDS
TTGTGAAATTTGAAGATGTT+TGG 0.419281 2.1:-14270418 None:intergenic
CTTTGGAGGATCTTTACCTT+GGG 0.422824 2.1:-14269290 MS.gene034372:CDS
AGAGCTTGCACAAGCTTATG+AGG 0.426543 2.1:-14269618 MS.gene034372:CDS
ATGTCTGTCAACTGAGATAC+AGG 0.432545 2.1:+14268309 None:intergenic
AAAGATGAAAAGATGTCAAA+TGG 0.433471 2.1:+14269503 None:intergenic
CCTTCTCTCCCTTGCACTGT+GGG 0.438316 2.1:+14268964 None:intergenic
TCATATACCTCACGCTTCTC+AGG 0.445588 2.1:+14269584 None:intergenic
TCCCTCACTGAGGCTTTATG+TGG 0.451630 2.1:-14268664 MS.gene034372:CDS
TGCAATGAATGTAAGGGTAC+TGG 0.456888 2.1:-14269014 MS.gene034372:CDS
TCATCTTTCTTCGGTGGAGG+TGG 0.461355 2.1:-14269488 MS.gene034372:CDS
GTATGGTGAAGATGCCCTTA+AGG 0.462316 2.1:-14269558 MS.gene034372:CDS
GGTTTGATTTAATCAATAGT+TGG 0.465413 2.1:+14268608 None:intergenic
ATACGCTTTCTTCAAATCAT+CGG 0.468985 2.1:+14270327 None:intergenic
CGTGAGGTATATGATCAGTA+TGG 0.471347 2.1:-14269575 MS.gene034372:CDS
TCTTTGGAGGATCTTTACCT+TGG 0.472410 2.1:-14269291 MS.gene034372:CDS
GATTAAGAATCATCCTGATA+AGG 0.476346 2.1:-14270293 MS.gene034372:CDS
GGATGTCGTTCACCCCTTGA+AGG 0.478745 2.1:-14269316 MS.gene034372:CDS
AGATCGATGCCCACAGTGCA+AGG 0.481792 2.1:-14268973 MS.gene034372:CDS
ATTAAGAATCATCCTGATAA+GGG 0.485570 2.1:-14270292 MS.gene034372:CDS
TACAGGAAAGGATCAAAGTC+TGG 0.495336 2.1:-14269131 MS.gene034372:intron
TGCCCTTCATGAAAGGCCTC+TGG 0.498481 2.1:+14268418 None:intergenic
CCAGGCTTGACAACTTCTCC+AGG 0.499453 2.1:+14268586 None:intergenic
ATATCTCCAGTAACTGTGTC+CGG 0.501009 2.1:+14268763 None:intergenic
GGTGCTTCGATGACCTGTGC+TGG 0.505989 2.1:-14269110 MS.gene034372:CDS
CTTGAAGTTCATGTTGAGAA+GGG 0.510818 2.1:-14268921 MS.gene034372:CDS
GCATCGATCTTTGTCACTGA+TGG 0.515086 2.1:+14268986 None:intergenic
ATCCTCCAAAGAGACCTTCA+AGG 0.518323 2.1:+14269302 None:intergenic
AAGGAAGGAATGGGTGGTGG+CGG 0.520461 2.1:-14269539 MS.gene034372:CDS
TACAAGGCAATCAATGATGA+AGG 0.521364 2.1:-14268453 MS.gene034372:CDS
CACCCCAAGTTCAAACGAAA+GGG 0.528668 2.1:-14268715 MS.gene034372:CDS
AGATGCCCTTAAGGAAGGAA+TGG 0.532671 2.1:-14269549 MS.gene034372:CDS
TGATCAAGAGACAGAGACTC+AGG 0.533617 2.1:+14268366 None:intergenic
CCTGGAGAAGTTGTCAAGCC+TGG 0.534032 2.1:-14268586 MS.gene034372:intron
GGTCAGAAGATTACCTTCCC+TGG 0.534089 2.1:-14268888 MS.gene034372:CDS
TTCATCAGCTTCACCAGGGA+AGG 0.534704 2.1:+14268875 None:intergenic
TAACACATACCCCTTGCACT+TGG 0.540192 2.1:+14269227 None:intergenic
ACTTGAAGTTCATGTTGAGA+AGG 0.543623 2.1:-14268922 MS.gene034372:CDS
CTTAAGGAAGGAATGGGTGG+TGG 0.547958 2.1:-14269542 MS.gene034372:CDS
TGTCTTGTGCTCCAAGTGCA+AGG 0.549478 2.1:-14269238 MS.gene034372:CDS
TACCAGAGGCCTTTCATGAA+GGG 0.550239 2.1:-14268420 MS.gene034372:CDS
TCTGTCTCTTGATCAGGTCA+AGG 0.553837 2.1:-14268358 MS.gene034372:CDS
GATGCCCTTAAGGAAGGAAT+GGG 0.556456 2.1:-14269548 MS.gene034372:CDS
CCCACAGTGCAAGGGAGAGA+AGG 0.557002 2.1:-14268964 MS.gene034372:CDS
CGTCTTTGTACTTCAACAGA+AGG 0.558455 2.1:-14268740 MS.gene034372:CDS
TTGAAGAAGAGACAAGAAGA+AGG 0.558667 2.1:-14268242 MS.gene034372:CDS
TAAAGCTTGCCCTTCATGAA+AGG 0.559348 2.1:+14268411 None:intergenic
GTCTTGTGCTCCAAGTGCAA+GGG 0.560067 2.1:-14269237 MS.gene034372:CDS
ACCGCTTCATCAGCTTCACC+AGG 0.560539 2.1:+14268870 None:intergenic
ATGACCTGTGCTGGTTGTCA+AGG 0.561075 2.1:-14269101 MS.gene034372:CDS
GTTGAGAAGGGGATGCAGAA+TGG 0.563375 2.1:-14268909 MS.gene034372:CDS
TGGTTACGCAGATTCATACA+AGG 0.564992 2.1:-14268469 MS.gene034372:intron
GTACCAGAGGCCTTTCATGA+AGG 0.566111 2.1:-14268421 MS.gene034372:CDS
ACTGAGATACAGGCCTTGCT+GGG 0.567469 2.1:+14268319 None:intergenic
GGTGAAGATGCCCTTAAGGA+AGG 0.569050 2.1:-14269554 MS.gene034372:CDS
TCAGTTGACAGACATGGAGC+TGG 0.570239 2.1:-14268301 MS.gene034372:CDS
GTGGTAGTAGCAGAGGAAGA+AGG 0.572018 2.1:-14269353 MS.gene034372:CDS
ACAGGTGGTGGTAGTAGCAG+AGG 0.575959 2.1:-14269360 MS.gene034372:intron
CCCTGGTGAAGCTGATGAAG+CGG 0.582550 2.1:-14268871 MS.gene034372:intron
AGAACCTTGACAACCAGCAC+AGG 0.585983 2.1:+14269097 None:intergenic
TGGAGACAATTCTCCCAGCA+AGG 0.587524 2.1:-14268332 MS.gene034372:CDS
ACACCCCAAGTTCAAACGAA+AGG 0.592574 2.1:-14268716 MS.gene034372:CDS
TGTACTCTTTGAGCACCACC+AGG 0.594168 2.1:+14268177 None:intergenic
TCCTCCAAAGAGACCTTCAA+GGG 0.596017 2.1:+14269303 None:intergenic
TTGAAGTTCATGTTGAGAAG+GGG 0.603095 2.1:-14268920 MS.gene034372:CDS
GTACCCTTACATTCATTGCA+AGG 0.605875 2.1:+14269017 None:intergenic
CAGGCTTGACAACTTCTCCA+GGG 0.612975 2.1:+14268587 None:intergenic
TAAGGGTGGTGATCCTGAAA+AGG 0.613088 2.1:-14270275 MS.gene034372:intron
TGTATCTCAGTTGACAGACA+TGG 0.616220 2.1:-14268307 MS.gene034372:CDS
GCCCTTAAGGAAGGAATGGG+TGG 0.620209 2.1:-14269545 MS.gene034372:CDS
GATGAGGATGATGAAATGCC+TGG 0.624859 2.1:-14268195 MS.gene034372:CDS
AAGGCAGCAAGCTCAGCAAG+AGG 0.624868 2.1:-14268223 MS.gene034372:CDS
ACCTTCTCTCCCTTGCACTG+TGG 0.630501 2.1:+14268963 None:intergenic
GATCGATGCCCACAGTGCAA+GGG 0.633588 2.1:-14268972 MS.gene034372:CDS
AAAGCTTCTTAGATGTCCCA+AGG 0.634241 2.1:+14269274 None:intergenic
TCTTGTGCTCCAAGTGCAAG+GGG 0.635966 2.1:-14269236 MS.gene034372:intron
CTATTGATTAAATCAAACCC+TGG 0.637960 2.1:-14268604 MS.gene034372:CDS
AGAGGAAGAAGGCAGAGACG+TGG 0.638556 2.1:-14269342 MS.gene034372:CDS
CATCCTTGCAATGAATGTAA+GGG 0.643345 2.1:-14269020 MS.gene034372:CDS
AAGAAGGCAGAGACGTGGTG+AGG 0.643979 2.1:-14269337 MS.gene034372:CDS
TCAGCAAGAGGCATATGATG+AGG 0.654664 2.1:-14268211 MS.gene034372:CDS
ACCACATAAAGCCTCAGTGA+GGG 0.659830 2.1:+14268663 None:intergenic
CATGGAGCTGGATGAGTGTG+AGG 0.667513 2.1:-14268289 MS.gene034372:CDS
GATCAAGAGACAGAGACTCA+GGG 0.667543 2.1:+14268367 None:intergenic
AAGGAATGCCAATGTACCAG+AGG 0.667557 2.1:-14268434 MS.gene034372:CDS
CTGGTATGAAGATATCTATG+AGG 0.673684 2.1:-14269076 MS.gene034372:CDS
GAGTGATCCTGAGAAGCGTG+AGG 0.676105 2.1:-14269591 MS.gene034372:CDS
AAGAATCATCCTGATAAGGG+TGG 0.677133 2.1:-14270289 MS.gene034372:CDS
CCGCTTCATCAGCTTCACCA+GGG 0.690995 2.1:+14268871 None:intergenic
GCTTTACATTCACTTCACAG+TGG 0.719754 2.1:-14268394 MS.gene034372:CDS
CCTCCAAAGAGACCTTCAAG+GGG 0.727234 2.1:+14269304 None:intergenic
AACCACATAAAGCCTCAGTG+AGG 0.740190 2.1:+14268662 None:intergenic
GCACACATTGTCCCTCACTG+AGG 0.763892 2.1:-14268674 MS.gene034372:CDS
GAGGATGATGAAATGCCTGG+TGG 0.804018 2.1:-14268192 MS.gene034372:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGAGATTTTTAAATTA+AGG - chr2.1:14268511-14268530 MS.gene034372:intron 10.0%
!!! ATTTGAGATTTTTAAATTAA+GGG - chr2.1:14268512-14268531 MS.gene034372:intron 10.0%
!! ATTAGTTAATTGATGAAATT+AGG - chr2.1:14268886-14268905 MS.gene034372:CDS 15.0%
!! ATTGAATTATATAATTGTTG+TGG - chr2.1:14268713-14268732 MS.gene034372:CDS 15.0%
!! TTAGTTAATTGATGAAATTA+GGG - chr2.1:14268887-14268906 MS.gene034372:CDS 15.0%
!! TTATCTTTGAATTTGATTAT+TGG - chr2.1:14268322-14268341 MS.gene034372:CDS 15.0%
!!! AAAAGTGATTTTTTTACTAT+AGG - chr2.1:14268553-14268572 MS.gene034372:intron 15.0%
!!! CTTGTTTGTTATTTTAATTT+AGG - chr2.1:14269116-14269135 MS.gene034372:CDS 15.0%
!!! TATTTTAATTTAGGAGATTA+GGG - chr2.1:14269125-14269144 MS.gene034372:CDS 15.0%
!!! TTATTTTAATTTAGGAGATT+AGG - chr2.1:14269124-14269143 MS.gene034372:CDS 15.0%
!!! TTTGAGATTTTTAAATTAAG+GGG - chr2.1:14268513-14268532 MS.gene034372:intron 15.0%
!!! AATAGTGATTAGTTGAATTT+AGG - chr2.1:14268413-14268432 MS.gene034372:CDS 20.0%
!!! AATTGTGATTAGTTAGTTTT+AGG - chr2.1:14268806-14268825 MS.gene034372:intron 20.0%
!!! ATAGTGATTAGTTGAATTTA+GGG - chr2.1:14268414-14268433 MS.gene034372:CDS 20.0%
!!! ATTGAATTTGATAATTGTTG+TGG - chr2.1:14268386-14268405 MS.gene034372:CDS 20.0%
!!! ATTGTGATTAGTTAGTTTTA+GGG - chr2.1:14268807-14268826 MS.gene034372:intron 20.0%
!!! ATTGTTAGTTGTATTGATAT+TGG - chr2.1:14268761-14268780 MS.gene034372:CDS 20.0%
!!! TAAAAAAAAACAACCTTTTC+AGG + chr2.1:14268305-14268324 None:intergenic 20.0%
!!! TTGTTAGTTGTATTGATATT+GGG - chr2.1:14268762-14268781 MS.gene034372:CDS 20.0%
! AAAGATGAAAAGATGTCAAA+TGG + chr2.1:14269064-14269083 None:intergenic 25.0%
! ACTAAATACTATGAGATTCT+TGG - chr2.1:14268194-14268213 MS.gene034372:CDS 25.0%
! ATCATATTGTATTTGTGAAC+AGG - chr2.1:14269186-14269205 MS.gene034372:intron 25.0%
! ATTAAGAATCATCCTGATAA+GGG - chr2.1:14268272-14268291 MS.gene034372:CDS 25.0%
! ATTGATTATGCAATTAGGAT+TGG - chr2.1:14268640-14268659 MS.gene034372:CDS 25.0%
! ATTGGGTTATATAATTGTTG+TGG - chr2.1:14268779-14268798 MS.gene034372:intron 25.0%
! GATTATTGGATTATCTGATT+TGG - chr2.1:14268336-14268355 MS.gene034372:CDS 25.0%
! TTGGTAGAATGATATTTGTT+AGG - chr2.1:14268467-14268486 MS.gene034372:intron 25.0%
!! GGTTTGATTTAATCAATAGT+TGG + chr2.1:14269959-14269978 None:intergenic 25.0%
!! TGCTGAAATTTTCAATCTTT+TGG - chr2.1:14270075-14270094 MS.gene034372:intron 25.0%
!! TGGTAGAATGATATTTGTTA+GGG - chr2.1:14268468-14268487 MS.gene034372:intron 25.0%
!!! GTTTGTTGGTATTTTTCTAA+TGG - chr2.1:14269378-14269397 MS.gene034372:intron 25.0%
!!! TTGGTATTGATTATGCAATT+AGG - chr2.1:14268635-14268654 MS.gene034372:CDS 25.0%
AAAATCAAACTACCATAACC+CGG + chr2.1:14268853-14268872 None:intergenic 30.0%
AATATCAATCCCATTAGCTA+CGG + chr2.1:14268583-14268602 None:intergenic 30.0%
ACACCTAACAACAATCAATT+GGG + chr2.1:14268614-14268633 None:intergenic 30.0%
ATACGCTTTCTTCAAATCAT+CGG + chr2.1:14268240-14268259 None:intergenic 30.0%
ATATTGTATTTGTGAACAGG+TGG - chr2.1:14269189-14269208 MS.gene034372:intron 30.0%
ATGTGAATAATCTACATACC+AGG + chr2.1:14269999-14270018 None:intergenic 30.0%
GATTAAGAATCATCCTGATA+AGG - chr2.1:14268271-14268290 MS.gene034372:CDS 30.0%
GTATGTAGATTATTCACATC+TGG - chr2.1:14270000-14270019 MS.gene034372:intron 30.0%
TACACCTAACAACAATCAAT+TGG + chr2.1:14268615-14268634 None:intergenic 30.0%
TTAGTGTTATCACTCTTCTT+AGG + chr2.1:14268179-14268198 None:intergenic 30.0%
TTGTTAGGGTTTATTTGTCA+TGG - chr2.1:14268482-14268501 MS.gene034372:intron 30.0%
TTTGATTGAATTAGGGTTGT+GGG - chr2.1:14268441-14268460 MS.gene034372:CDS 30.0%
! AAGATATCTATGAGGCATTT+GGG - chr2.1:14269496-14269515 MS.gene034372:CDS 30.0%
! CTATTGATTAAATCAAACCC+TGG - chr2.1:14269960-14269979 MS.gene034372:intron 30.0%
! GACATCTTTTCATCTTTCTT+CGG - chr2.1:14269067-14269086 MS.gene034372:CDS 30.0%
! TTACCCAATTGATTGTTGTT+AGG - chr2.1:14268608-14268627 MS.gene034372:CDS 30.0%
! TTGATTGTTGTTAGGTGTAT+TGG - chr2.1:14268616-14268635 MS.gene034372:CDS 30.0%
! TTGCATTTGCTGAATCATAT+TGG + chr2.1:14269524-14269543 None:intergenic 30.0%
! TTGGTATTTTTCTAATGGCT+CGG - chr2.1:14269383-14269402 MS.gene034372:intron 30.0%
!! AGGGTTAGTTTGATTGAATT+AGG - chr2.1:14268433-14268452 MS.gene034372:CDS 30.0%
!! GGGTTAGTTTGATTGAATTA+GGG - chr2.1:14268434-14268453 MS.gene034372:CDS 30.0%
!! TTGTTGATTGGTTTGATTAC+AGG - chr2.1:14269416-14269435 MS.gene034372:intron 30.0%
AAATCAAACTACCATAACCC+GGG + chr2.1:14268852-14268871 None:intergenic 35.0%
AACAAACAAGAAACCATACC+AGG + chr2.1:14269106-14269125 None:intergenic 35.0%
ACATCCTTGCAATGAATGTA+AGG - chr2.1:14269543-14269562 MS.gene034372:CDS 35.0%
ACTTGAAGTTCATGTTGAGA+AGG - chr2.1:14269642-14269661 MS.gene034372:intron 35.0%
AGGGTAGTGTGATTGAATTA+AGG - chr2.1:14268826-14268845 MS.gene034372:intron 35.0%
ATATCAATCCCATTAGCTAC+GGG + chr2.1:14268582-14268601 None:intergenic 35.0%
CATCCTTGCAATGAATGTAA+GGG - chr2.1:14269544-14269563 MS.gene034372:CDS 35.0%
CTGGTATGAAGATATCTATG+AGG - chr2.1:14269488-14269507 MS.gene034372:CDS 35.0%
CTTGAAGTTCATGTTGAGAA+GGG - chr2.1:14269643-14269662 MS.gene034372:intron 35.0%
GGAGTTCTTACATTGTTGAT+TGG - chr2.1:14269404-14269423 MS.gene034372:intron 35.0%
GTTTGATTGAATTAGGGTTG+TGG - chr2.1:14268440-14268459 MS.gene034372:CDS 35.0%
TACAAGGCAATCAATGATGA+AGG - chr2.1:14270111-14270130 MS.gene034372:intron 35.0%
TACGCTTTCTTCAAATCATC+GGG + chr2.1:14268239-14268258 None:intergenic 35.0%
TTGAAGAAGAGACAAGAAGA+AGG - chr2.1:14270322-14270341 MS.gene034372:CDS 35.0%
TTGAAGTTCATGTTGAGAAG+GGG - chr2.1:14269644-14269663 MS.gene034372:intron 35.0%
! ATCTTTTCATCTTTCTTCGG+TGG - chr2.1:14269070-14269089 MS.gene034372:CDS 35.0%
! GAAGATATCTATGAGGCATT+TGG - chr2.1:14269495-14269514 MS.gene034372:CDS 35.0%
! GACTGAATTTTGTTCGTCTT+TGG - chr2.1:14270052-14270071 MS.gene034372:intron 35.0%
!! GATTGGTTTGATTACAGGAA+AGG - chr2.1:14269421-14269440 MS.gene034372:intron 35.0%
!! GGGTTATGGTAGTTTGATTT+TGG - chr2.1:14268852-14268871 MS.gene034372:intron 35.0%
AAAGCTTCTTAGATGTCCCA+AGG + chr2.1:14269293-14269312 None:intergenic 40.0%
AAGAATCATCCTGATAAGGG+TGG - chr2.1:14268275-14268294 MS.gene034372:CDS 40.0%
AGGTCTATCTGCATGTTTGT+TGG - chr2.1:14269364-14269383 MS.gene034372:intron 40.0%
AGTGTGATTGAATTAAGGCC+CGG - chr2.1:14268831-14268850 MS.gene034372:intron 40.0%
ATATCTCCAGTAACTGTGTC+CGG + chr2.1:14269804-14269823 None:intergenic 40.0%
ATGTCTGTCAACTGAGATAC+AGG + chr2.1:14270258-14270277 None:intergenic 40.0%
CAACAATCCAGCTCAAACTA+AGG + chr2.1:14269740-14269759 None:intergenic 40.0%
CGTCTTTGTACTTCAACAGA+AGG - chr2.1:14269824-14269843 MS.gene034372:intron 40.0%
CGTGAGGTATATGATCAGTA+TGG - chr2.1:14268989-14269008 MS.gene034372:CDS 40.0%
CTTATTGTTTGTCTTGCAGC+CGG - chr2.1:14269782-14269801 MS.gene034372:intron 40.0%
GCTTTACATTCACTTCACAG+TGG - chr2.1:14270170-14270189 MS.gene034372:intron 40.0%
GTACCCTTACATTCATTGCA+AGG + chr2.1:14269550-14269569 None:intergenic 40.0%
TAAAGCTTGCCCTTCATGAA+AGG + chr2.1:14270156-14270175 None:intergenic 40.0%
TACAGGAAAGGATCAAAGTC+TGG - chr2.1:14269433-14269452 MS.gene034372:intron 40.0%
TATCAATCCCATTAGCTACG+GGG + chr2.1:14268581-14268600 None:intergenic 40.0%
TCACCCTTTCGTTTGAACTT+GGG + chr2.1:14269855-14269874 None:intergenic 40.0%
TGGTTACGCAGATTCATACA+AGG - chr2.1:14270095-14270114 MS.gene034372:intron 40.0%
TGTATCTCAGTTGACAGACA+TGG - chr2.1:14270257-14270276 MS.gene034372:intron 40.0%
TTCACCCTTTCGTTTGAACT+TGG + chr2.1:14269856-14269875 None:intergenic 40.0%
TTGTATTTGTGAACAGGTGG+TGG - chr2.1:14269192-14269211 MS.gene034372:intron 40.0%
! CTTTGGAGGATCTTTACCTT+GGG - chr2.1:14269274-14269293 MS.gene034372:CDS 40.0%
! TACAGTTCCTTAGTTTGAGC+TGG - chr2.1:14269730-14269749 MS.gene034372:intron 40.0%
! TCTTTGGAGGATCTTTACCT+TGG - chr2.1:14269273-14269292 MS.gene034372:CDS 40.0%
! TGCAATGAATGTAAGGGTAC+TGG - chr2.1:14269550-14269569 MS.gene034372:CDS 40.0%
! TTTTCATCTTTCTTCGGTGG+AGG - chr2.1:14269073-14269092 MS.gene034372:CDS 40.0%
AACCACATAAAGCCTCAGTG+AGG + chr2.1:14269905-14269924 None:intergenic 45.0%
AAGGAATGCCAATGTACCAG+AGG - chr2.1:14270130-14270149 MS.gene034372:intron 45.0%
ACACCCCAAGTTCAAACGAA+AGG - chr2.1:14269848-14269867 MS.gene034372:intron 45.0%
ACCACATAAAGCCTCAGTGA+GGG + chr2.1:14269904-14269923 None:intergenic 45.0%
ACCACCCATTCCTTCCTTAA+GGG + chr2.1:14269023-14269042 None:intergenic 45.0%
AGAGCTTGCACAAGCTTATG+AGG - chr2.1:14268946-14268965 MS.gene034372:CDS 45.0%
AGATGCCCTTAAGGAAGGAA+TGG - chr2.1:14269015-14269034 MS.gene034372:CDS 45.0%
ATAGGATCCCCGTAGCTAAT+GGG - chr2.1:14268571-14268590 MS.gene034372:intron 45.0%
ATCCTCCAAAGAGACCTTCA+AGG + chr2.1:14269265-14269284 None:intergenic 45.0%
ATGAAAGGCCTCTGGTACAT+TGG + chr2.1:14270141-14270160 None:intergenic 45.0%
CACCCCAAGTTCAAACGAAA+GGG - chr2.1:14269849-14269868 MS.gene034372:intron 45.0%
CACCCTTTCGTTTGAACTTG+GGG + chr2.1:14269854-14269873 None:intergenic 45.0%
CCAAATGAGTCAGCGCAAAT+TGG + chr2.1:14269929-14269948 None:intergenic 45.0%
GATCAAGAGACAGAGACTCA+GGG + chr2.1:14270200-14270219 None:intergenic 45.0%
GATGAGGATGATGAAATGCC+TGG - chr2.1:14270369-14270388 MS.gene034372:CDS 45.0%
GATGCCCTTAAGGAAGGAAT+GGG - chr2.1:14269016-14269035 MS.gene034372:CDS 45.0%
GTATGGTGAAGATGCCCTTA+AGG - chr2.1:14269006-14269025 MS.gene034372:CDS 45.0%
GTGTGATTGAATTAAGGCCC+GGG - chr2.1:14268832-14268851 MS.gene034372:intron 45.0%
TAACACATACCCCTTGCACT+TGG + chr2.1:14269340-14269359 None:intergenic 45.0%
TAAGGGTGGTGATCCTGAAA+AGG - chr2.1:14268289-14268308 MS.gene034372:CDS 45.0%
TACCAGAGGCCTTTCATGAA+GGG - chr2.1:14270144-14270163 MS.gene034372:intron 45.0%
TATAGGATCCCCGTAGCTAA+TGG - chr2.1:14268570-14268589 MS.gene034372:intron 45.0%
TCATATACCTCACGCTTCTC+AGG + chr2.1:14268983-14269002 None:intergenic 45.0%
TCCTCCAAAGAGACCTTCAA+GGG + chr2.1:14269264-14269283 None:intergenic 45.0%
TCTGTCTCTTGATCAGGTCA+AGG - chr2.1:14270206-14270225 MS.gene034372:intron 45.0%
TCTTGATCAGGTCAAGGCTT+TGG - chr2.1:14270212-14270231 MS.gene034372:intron 45.0%
TGAGTCTCTGTCTCTTGATC+AGG - chr2.1:14270200-14270219 MS.gene034372:intron 45.0%
TGATCAAGAGACAGAGACTC+AGG + chr2.1:14270201-14270220 None:intergenic 45.0%
TTGAATTAAGGCCCGGGTTA+TGG - chr2.1:14268838-14268857 MS.gene034372:intron 45.0%
! AGTGCAAGGGGTATGTGTTA+TGG - chr2.1:14269340-14269359 MS.gene034372:CDS 45.0%
! CAAGGGGTATGTGTTATGGA+AGG - chr2.1:14269344-14269363 MS.gene034372:CDS 45.0%
! GAATTAGGGTTGTGGGTTGT+TGG - chr2.1:14268448-14268467 MS.gene034372:CDS 45.0%
! GCATCGATCTTTGTCACTGA+TGG + chr2.1:14269581-14269600 None:intergenic 45.0%
! TCAGCAAGAGGCATATGATG+AGG - chr2.1:14270353-14270372 MS.gene034372:CDS 45.0%
!! CCAATTTGCGCTGACTCATT+TGG - chr2.1:14269926-14269945 MS.gene034372:intron 45.0%
AACTGAGATACAGGCCTTGC+TGG + chr2.1:14270249-14270268 None:intergenic 50.0%
ACTGAGATACAGGCCTTGCT+GGG + chr2.1:14270248-14270267 None:intergenic 50.0%
AGAACCTTGACAACCAGCAC+AGG + chr2.1:14269470-14269489 None:intergenic 50.0%
CACCACCCATTCCTTCCTTA+AGG + chr2.1:14269024-14269043 None:intergenic 50.0%
CAGGCTTGACAACTTCTCCA+GGG + chr2.1:14269980-14269999 None:intergenic 50.0%
CCTCCAAAGAGACCTTCAAG+GGG + chr2.1:14269263-14269282 None:intergenic 50.0%
CTTAAGGAAGGAATGGGTGG+TGG - chr2.1:14269022-14269041 MS.gene034372:CDS 50.0%
GAGGATGATGAAATGCCTGG+TGG - chr2.1:14270372-14270391 MS.gene034372:CDS 50.0%
GGTCAGAAGATTACCTTCCC+TGG - chr2.1:14269676-14269695 MS.gene034372:intron 50.0%
GGTGAAGATGCCCTTAAGGA+AGG - chr2.1:14269010-14269029 MS.gene034372:CDS 50.0%
GTACCAGAGGCCTTTCATGA+AGG - chr2.1:14270143-14270162 MS.gene034372:intron 50.0%
GTCTTGTGCTCCAAGTGCAA+GGG - chr2.1:14269327-14269346 MS.gene034372:CDS 50.0%
GTGGTAGTAGCAGAGGAAGA+AGG - chr2.1:14269211-14269230 MS.gene034372:intron 50.0%
GTTGAGAAGGGGATGCAGAA+TGG - chr2.1:14269655-14269674 MS.gene034372:intron 50.0%
TCACCCCTTGAAGGTCTCTT+TGG - chr2.1:14269257-14269276 MS.gene034372:CDS 50.0%
TCAGGATCACCACCCTTATC+AGG + chr2.1:14268287-14268306 None:intergenic 50.0%
TCAGTTGACAGACATGGAGC+TGG - chr2.1:14270263-14270282 MS.gene034372:intron 50.0%
TCATCTTTCTTCGGTGGAGG+TGG - chr2.1:14269076-14269095 MS.gene034372:CDS 50.0%
TCTTGTGCTCCAAGTGCAAG+GGG - chr2.1:14269328-14269347 MS.gene034372:CDS 50.0%
TGGAGACAATTCTCCCAGCA+AGG - chr2.1:14270232-14270251 MS.gene034372:intron 50.0%
TGTACTCTTTGAGCACCACC+AGG + chr2.1:14270390-14270409 None:intergenic 50.0%
TGTCTTGTGCTCCAAGTGCA+AGG - chr2.1:14269326-14269345 MS.gene034372:CDS 50.0%
TTCATCAGCTTCACCAGGGA+AGG + chr2.1:14269692-14269711 None:intergenic 50.0%
! TCCCTCACTGAGGCTTTATG+TGG - chr2.1:14269900-14269919 MS.gene034372:intron 50.0%
! TGGAGGTGGATTTCCTGGTA+TGG - chr2.1:14269090-14269109 MS.gene034372:CDS 50.0%
!! ATGACCTGTGCTGGTTGTCA+AGG - chr2.1:14269463-14269482 MS.gene034372:intron 50.0%
!! TGTGCTGGTTGTCAAGGTTC+TGG - chr2.1:14269469-14269488 MS.gene034372:intron 50.0%
!!! GCTGATGAAGCGGTTGGTTT+TGG - chr2.1:14269703-14269722 MS.gene034372:intron 50.0%
AAGAAGGCAGAGACGTGGTG+AGG - chr2.1:14269227-14269246 MS.gene034372:intron 55.0%
AAGGCAGCAAGCTCAGCAAG+AGG - chr2.1:14270341-14270360 MS.gene034372:CDS 55.0%
ACCGCTTCATCAGCTTCACC+AGG + chr2.1:14269697-14269716 None:intergenic 55.0%
ACCTTCTCTCCCTTGCACTG+TGG + chr2.1:14269604-14269623 None:intergenic 55.0%
AGAGGAAGAAGGCAGAGACG+TGG - chr2.1:14269222-14269241 MS.gene034372:intron 55.0%
AGATCGATGCCCACAGTGCA+AGG - chr2.1:14269591-14269610 MS.gene034372:CDS 55.0%
CATGGAGCTGGATGAGTGTG+AGG - chr2.1:14270275-14270294 MS.gene034372:intron 55.0%
CCAGGCTTGACAACTTCTCC+AGG + chr2.1:14269981-14270000 None:intergenic 55.0%
CCCCTTGAAGGTCTCTTTGG+AGG - chr2.1:14269260-14269279 MS.gene034372:CDS 55.0%
CCCTGGTGAAGCTGATGAAG+CGG - chr2.1:14269693-14269712 MS.gene034372:intron 55.0%
CCGCTTCATCAGCTTCACCA+GGG + chr2.1:14269696-14269715 None:intergenic 55.0%
CCTGGAGAAGTTGTCAAGCC+TGG - chr2.1:14269978-14269997 MS.gene034372:intron 55.0%
CCTTCTCTCCCTTGCACTGT+GGG + chr2.1:14269603-14269622 None:intergenic 55.0%
GATCGATGCCCACAGTGCAA+GGG - chr2.1:14269592-14269611 MS.gene034372:CDS 55.0%
GCACACATTGTCCCTCACTG+AGG - chr2.1:14269890-14269909 MS.gene034372:intron 55.0%
GCCCTTAAGGAAGGAATGGG+TGG - chr2.1:14269019-14269038 MS.gene034372:CDS 55.0%
GGATGTCGTTCACCCCTTGA+AGG - chr2.1:14269248-14269267 MS.gene034372:CDS 55.0%
GGTGAAGCTGATGAAGCGGT+TGG - chr2.1:14269697-14269716 MS.gene034372:intron 55.0%
TGCCCTTCATGAAAGGCCTC+TGG + chr2.1:14270149-14270168 None:intergenic 55.0%
TTGCAGCCGGACACAGTTAC+TGG - chr2.1:14269795-14269814 MS.gene034372:intron 55.0%
! AAGGAAGGAATGGGTGGTGG+CGG - chr2.1:14269025-14269044 MS.gene034372:CDS 55.0%
! ACAGGTGGTGGTAGTAGCAG+AGG - chr2.1:14269204-14269223 MS.gene034372:intron 55.0%
! GAGTGATCCTGAGAAGCGTG+AGG - chr2.1:14268973-14268992 MS.gene034372:CDS 55.0%
! TTCGGTGGAGGTGGATTTCC+TGG - chr2.1:14269085-14269104 MS.gene034372:CDS 55.0%
CCCACAGTGCAAGGGAGAGA+AGG - chr2.1:14269600-14269619 MS.gene034372:CDS 60.0%
GGTGCTTCGATGACCTGTGC+TGG - chr2.1:14269454-14269473 MS.gene034372:intron 60.0%
!! GAAGGAATGGGTGGTGGCGG+TGG - chr2.1:14269028-14269047 MS.gene034372:CDS 65.0%
!! GGAATGGGTGGTGGCGGTGG+TGG - chr2.1:14269031-14269050 MS.gene034372:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 14268161 14270425 14268161 ID=MS.gene034372
chr2.1 mRNA 14268161 14270425 14268161 ID=MS.gene034372.t1;Parent=MS.gene034372
chr2.1 exon 14270276 14270425 14270276 ID=MS.gene034372.t1.exon1;Parent=MS.gene034372.t1
chr2.1 CDS 14270276 14270425 14270276 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
chr2.1 exon 14269480 14269645 14269480 ID=MS.gene034372.t1.exon2;Parent=MS.gene034372.t1
chr2.1 CDS 14269480 14269645 14269480 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
chr2.1 exon 14269237 14269378 14269237 ID=MS.gene034372.t1.exon3;Parent=MS.gene034372.t1
chr2.1 CDS 14269237 14269378 14269237 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
chr2.1 exon 14268872 14269148 14268872 ID=MS.gene034372.t1.exon4;Parent=MS.gene034372.t1
chr2.1 CDS 14268872 14269148 14268872 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
chr2.1 exon 14268587 14268785 14268587 ID=MS.gene034372.t1.exon5;Parent=MS.gene034372.t1
chr2.1 CDS 14268587 14268785 14268587 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
chr2.1 exon 14268161 14268480 14268161 ID=MS.gene034372.t1.exon6;Parent=MS.gene034372.t1
chr2.1 CDS 14268161 14268480 14268161 ID=cds.MS.gene034372.t1;Parent=MS.gene034372.t1
Gene Sequence

>MS.gene034372

ATGTTTGGAAGAGCGCCTAAGAAGAGTGATAACACTAAATACTATGAGATTCTTGGTGTTTCGAAGAATGCTTCTCCCGATGATTTGAAGAAAGCGTATAAAAAAGCTGCGATTAAGAATCATCCTGATAAGGGTGGTGATCCTGAAAAGGTTGTTTTTTTTTATCTTTGAATTTGATTATTGGATTATCTGATTTGGTTTTTGATTGATCAATATATGTTGATGATTGAATTTGATAATTGTTGTGGTTTGAATAGTGATTAGTTGAATTTAGGGTTAGTTTGATTGAATTAGGGTTGTGGGTTGTTGGTAGAATGATATTTGTTAGGGTTTATTTGTCATGGATTATAAATTTGAGATTTTTAAATTAAGGGGAAGCTATTTTACTTTAAAAAAGTGATTTTTTTACTATAGGATCCCCGTAGCTAATGGGATTGATATTGATGATTACCCAATTGATTGTTGTTAGGTGTATTGGTATTGATTATGCAATTAGGATTGGCGTTAATGCTAAAGATTGATAATTGATTGTTAGTTGTAATGATATTGATGATTGAATTATATAATTGTTGTGGTTTGAATTGTGATTAGATAGTTTTGATTGTTAGTTGTATTGATATTGGGTTATATAATTGTTGTGGTTTGAATTGTGATTAGTTAGTTTTAGGGTAGTGTGATTGAATTAAGGCCCGGGTTATGGTAGTTTGATTTTGGTTTTTGTTTTGATTAGTTAATTGATGAAATTAGGGATTAATTTGTGTTTGTTTGTTTTTGATGTAGTTCAAAGAGCTTGCACAAGCTTATGAGGTTTTGAGTGATCCTGAGAAGCGTGAGGTATATGATCAGTATGGTGAAGATGCCCTTAAGGAAGGAATGGGTGGTGGCGGTGGTGGTCACGATCCATTTGACATCTTTTCATCTTTCTTCGGTGGAGGTGGATTTCCTGGTATGGTTTCTTGTTTGTTATTTTAATTTAGGAGATTAGGGATTATTCAATCGATAACTGTTTGTATGATTGTGTCTTAATCATATTGTATTTGTGAACAGGTGGTGGTAGTAGCAGAGGAAGAAGGCAGAGACGTGGTGAGGATGTCGTTCACCCCTTGAAGGTCTCTTTGGAGGATCTTTACCTTGGGACATCTAAGAAGCTTTCTCTTTCACGAAATGTCTTGTGCTCCAAGTGCAAGGGGTATGTGTTATGGAAGGTCTATCTGCATGTTTGTTGGTATTTTTCTAATGGCTCGGAGTTCTTACATTGTTGATTGGTTTGATTACAGGAAAGGATCAAAGTCTGGTGCTTCGATGACCTGTGCTGGTTGTCAAGGTTCTGGTATGAAGATATCTATGAGGCATTTGGGTGCCAATATGATTCAGCAAATGCAACATCCTTGCAATGAATGTAAGGGTACTGGAGAGACCATCAGTGACAAAGATCGATGCCCACAGTGCAAGGGAGAGAAGGTTGTTCAACAGAAGAAAGTACTTGAAGTTCATGTTGAGAAGGGGATGCAGAATGGTCAGAAGATTACCTTCCCTGGTGAAGCTGATGAAGCGGTTGGTTTTGGATCATACAGTTCCTTAGTTTGAGCTGGATTGTTGAAATTCTAGATACTGATTTTAACTTATTGTTTGTCTTGCAGCCGGACACAGTTACTGGAGATATCGTCTTTGTACTTCAACAGAAGGAACACCCCAAGTTCAAACGAAAGGGTGAAGATCTTTTTGTAGAGCACACATTGTCCCTCACTGAGGCTTTATGTGGTTTCCAATTTGCGCTGACTCATTTGGATTCTCGCCAACTATTGATTAAATCAAACCCTGGAGAAGTTGTCAAGCCTGGTATGTAGATTATTCACATCTGGTTTACTGCATTGTGAAAACATTGTTGAGTGACTGAATTTTGTTCGTCTTTGGTGCTGAAATTTTCAATCTTTTGGTTACGCAGATTCATACAAGGCAATCAATGATGAAGGAATGCCAATGTACCAGAGGCCTTTCATGAAGGGCAAGCTTTACATTCACTTCACAGTGGAGTTCCCTGAGTCTCTGTCTCTTGATCAGGTCAAGGCTTTGGAGACAATTCTCCCAGCAAGGCCTGTATCTCAGTTGACAGACATGGAGCTGGATGAGTGTGAGGAGACAACACTTCATGATGTCAACATTGAAGAAGAGACAAGAAGAAGGCAGCAAGCTCAGCAAGAGGCATATGATGAGGATGATGAAATGCCTGGTGGTGCTCAAAGAGTACAATGTGCTCAGCAGTAA
Protein sequence

>MS.gene034372.t1

MFGRAPKKSDNTKYYEILGVSKNASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGGFPGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCKGKGSKSGASMTCAGCQGSGMKISMRHLGANMIQQMQHPCNECKGTGETISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFALTHLDSRQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVEFPESLSLDQVKALETILPARPVSQLTDMELDECEETTLHDVNIEEETRRRQQAQQEAYDEDDEMPGGAQRVQCAQQ