Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40342.t1 | KEH35970.1 | 90.8 | 415 | 33 | 2 | 16 | 430 | 170 | 579 | 2.10E-200 | 708.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40342.t1 | Q9LYE3 | 36.3 | 212 | 125 | 5 | 225 | 430 | 352 | 559 | 6.2e-28 | 126.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40342.t1 | A0A072V2S5 | 90.8 | 415 | 33 | 2 | 16 | 430 | 73 | 482 | 1.5e-200 | 708.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene40342 | 0.822226 | 2.65E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene40342 | 0.808261 | 3.38E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene40342 | 0.812679 | 3.75E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene40342 | 0.810281 | 1.25E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene40342 | -0.812021 | 5.23E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene40342 | 0.813946 | 1.98E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene40342 | 0.800396 | 1.47E-48 | -1.69E-46 |
| MS.gene051210 | MS.gene40342 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene40342 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene40342 | 0.802174 | 6.36E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene40342 | 0.820352 | 7.18E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene40342 | 0.808101 | 3.65E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene40342 | 0.809281 | 2.04E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene40342 | 0.812177 | 4.83E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene40342 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene40342 | 0.804539 | 2.06E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene40342 | 0.863008 | 3.38E-64 | -1.69E-46 |
| MS.gene057360 | MS.gene40342 | 0.833509 | 5.12E-56 | -1.69E-46 |
| MS.gene057869 | MS.gene40342 | 0.812629 | 3.85E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene40342 | 0.82836 | 9.39E-55 | -1.69E-46 |
| MS.gene059331 | MS.gene40342 | 0.817402 | 3.36E-52 | -1.69E-46 |
| MS.gene059335 | MS.gene40342 | 0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene40342 | 0.840165 | 1.02E-57 | -1.69E-46 |
| MS.gene05978 | MS.gene40342 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene40342 | 0.8382 | 3.31E-57 | -1.69E-46 |
| MS.gene060803 | MS.gene40342 | 0.805694 | 1.18E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene40342 | 0.812712 | 3.69E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40342.t1 | MTR_3g109470 | 90.843 | 415 | 33 | 2 | 16 | 430 | 73 | 482 | 0.0 | 729 |
| MS.gene40342.t1 | MTR_3g109470 | 90.843 | 415 | 33 | 2 | 16 | 430 | 170 | 579 | 0.0 | 727 |
| MS.gene40342.t1 | MTR_3g109470 | 90.843 | 415 | 33 | 2 | 16 | 430 | 170 | 579 | 0.0 | 726 |
| MS.gene40342.t1 | MTR_2g062470 | 46.226 | 106 | 57 | 0 | 325 | 430 | 353 | 458 | 1.00e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40342.t1 | AT5G11470 | 49.107 | 112 | 57 | 0 | 319 | 430 | 448 | 559 | 1.32e-35 | 139 |
| MS.gene40342.t1 | AT5G11470 | 49.107 | 112 | 57 | 0 | 319 | 430 | 448 | 559 | 2.81e-35 | 139 |
| MS.gene40342.t1 | AT3G15605 | 41.667 | 96 | 56 | 0 | 333 | 428 | 207 | 302 | 3.67e-16 | 80.5 |
| MS.gene40342.t1 | AT3G15605 | 41.667 | 96 | 56 | 0 | 333 | 428 | 207 | 302 | 3.67e-16 | 80.5 |
| MS.gene40342.t1 | AT3G15605 | 41.667 | 96 | 56 | 0 | 333 | 428 | 291 | 386 | 9.88e-16 | 79.3 |
| MS.gene40342.t1 | AT3G15605 | 40.816 | 98 | 56 | 1 | 333 | 428 | 207 | 304 | 1.92e-14 | 75.1 |
Find 90 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGCTGCTTGAAAATT+TGG | 0.078848 | 3.3:+89852466 | MS.gene40342:CDS |
| TAAATCACAGGATATTATTT+TGG | 0.169466 | 3.3:+89852936 | MS.gene40342:intron |
| TACCTCTAGCCTTGGTTTAA+AGG | 0.202833 | 3.3:+89846943 | MS.gene40342:CDS |
| TGGGGTTAATAAGGCTTCTT+TGG | 0.244605 | 3.3:+89847042 | MS.gene40342:CDS |
| GAAAGAGAATGGGGTTAATA+AGG | 0.256850 | 3.3:+89847033 | MS.gene40342:CDS |
| AACCCCATTCTCTTTCTCTT+TGG | 0.280643 | 3.3:-89847026 | None:intergenic |
| GACTAGAATATGCGGTCTTC+TGG | 0.293058 | 3.3:-89852993 | None:intergenic |
| CTTGGCGGTCTTTCAAAACT+TGG | 0.312191 | 3.3:+89846770 | MS.gene40342:CDS |
| AGAATCTGTCATTAGAAAAT+TGG | 0.317702 | 3.3:+89853175 | MS.gene40342:CDS |
| GGCTGTTTCTTGATGTCAAA+TGG | 0.319595 | 3.3:+89853203 | MS.gene40342:CDS |
| TCTTGCTTGTGCCCCAAGTT+TGG | 0.333509 | 3.3:-89847625 | None:intergenic |
| CGACAAATCAACAGGCGATT+GGG | 0.339266 | 3.3:+89847226 | MS.gene40342:CDS |
| TCCAAGATTGATTCAGAAAT+AGG | 0.344057 | 3.3:+89847175 | MS.gene40342:CDS |
| GCATATTCTAGTCCTCATTC+TGG | 0.349043 | 3.3:+89853003 | MS.gene40342:CDS |
| GCCTATTTCTGAATCAATCT+TGG | 0.351496 | 3.3:-89847176 | None:intergenic |
| TTCTCTTTCTCTTTGGATAG+AGG | 0.359673 | 3.3:-89847019 | None:intergenic |
| GCTAGAGGAATGTGATAGTT+TGG | 0.367058 | 3.3:-89847083 | None:intergenic |
| GTCTACAACCTCTCCAAACT+TGG | 0.369836 | 3.3:+89847612 | MS.gene40342:CDS |
| ATGGTAGGAATATCTAAAAT+TGG | 0.371517 | 3.3:+89847118 | MS.gene40342:CDS |
| TGTTGATTCTAAGCCATCAT+TGG | 0.385061 | 3.3:+89846910 | MS.gene40342:CDS |
| ACATTCCTCTAGCGATGGTT+TGG | 0.401515 | 3.3:+89847093 | MS.gene40342:CDS |
| CTCTAGCGATGGTTTGGAAA+TGG | 0.406079 | 3.3:+89847099 | MS.gene40342:CDS |
| TAGGCGGACGTGATATTGTT+GGG | 0.412094 | 3.3:+89847194 | MS.gene40342:CDS |
| CAAGCGATTGGAGGAGAGAA+AGG | 0.433552 | 3.3:+89847429 | MS.gene40342:CDS |
| TTTAACTTCATCAGAAGTAC+AGG | 0.454276 | 3.3:+89852496 | MS.gene40342:CDS |
| TCTTTCATTCTTTCCTCCCA+AGG | 0.462766 | 3.3:-89852425 | None:intergenic |
| CTTCAAAACGGTCTTATCAA+TGG | 0.467089 | 3.3:-89847152 | None:intergenic |
| GTTGATTCTAAGCCATCATT+GGG | 0.482854 | 3.3:+89846911 | MS.gene40342:CDS |
| ATCAATCTTGGACTTCAAAA+CGG | 0.483446 | 3.3:-89847164 | None:intergenic |
| TCTCCGATCGACAAATCAAC+AGG | 0.493738 | 3.3:+89847218 | MS.gene40342:CDS |
| TCGACAAATCAACAGGCGAT+TGG | 0.493993 | 3.3:+89847225 | MS.gene40342:CDS |
| CTGGTGACAAGTTGGCCGAC+AGG | 0.500385 | 3.3:+89847398 | MS.gene40342:CDS |
| TATCCAAAGAGAAAGAGAAT+GGG | 0.506655 | 3.3:+89847023 | MS.gene40342:CDS |
| CTTCCTTCACATCATCATCA+TGG | 0.511593 | 3.3:-89847519 | None:intergenic |
| TTTCTCTTTGGATAGAGGCA+AGG | 0.511946 | 3.3:-89847014 | None:intergenic |
| CTATCCAAAGAGAAAGAGAA+TGG | 0.515510 | 3.3:+89847022 | MS.gene40342:CDS |
| ACAACGTCAGTTAAACTCTC+TGG | 0.516055 | 3.3:+89847379 | MS.gene40342:CDS |
| AAGGACACTAGTAAATCAAA+TGG | 0.518195 | 3.3:+89846962 | MS.gene40342:CDS |
| GCTGTTTCTTGATGTCAAAT+GGG | 0.525144 | 3.3:+89853204 | MS.gene40342:CDS |
| AAGCAAATGGTTTAAGCCAA+TGG | 0.526651 | 3.3:+89852229 | MS.gene40342:CDS |
| ATGAAAGATGCTTATGAGCA+AGG | 0.529715 | 3.3:+89852440 | MS.gene40342:CDS |
| ACAATGCAAACTAAACTCTC+TGG | 0.529970 | 3.3:+89847568 | MS.gene40342:CDS |
| TCTACAACCTCTCCAAACTT+GGG | 0.530962 | 3.3:+89847613 | MS.gene40342:CDS |
| ATAGGCGGACGTGATATTGT+TGG | 0.531731 | 3.3:+89847193 | MS.gene40342:CDS |
| TCGCTTGTTAATTTGCCTGT+CGG | 0.534542 | 3.3:-89847413 | None:intergenic |
| AATTTATATAGTCAAAAGCT+TGG | 0.539385 | 3.3:+89846752 | MS.gene40342:CDS |
| GCAAATTAACAAGCGATTGG+AGG | 0.543377 | 3.3:+89847420 | MS.gene40342:CDS |
| ATCTGTCATTAGAAAATTGG+AGG | 0.543865 | 3.3:+89853178 | MS.gene40342:CDS |
| GACAAATCAACAGGCGATTG+GGG | 0.544914 | 3.3:+89847227 | MS.gene40342:CDS |
| GGTTTAGATGAGAAACAAGT+TGG | 0.544944 | 3.3:+89846791 | MS.gene40342:CDS |
| TTATATAGTCAAAAGCTTGG+CGG | 0.546878 | 3.3:+89846755 | MS.gene40342:CDS |
| AATGGAAGGGACGTCGATGA+TGG | 0.549163 | 3.3:+89847316 | MS.gene40342:CDS |
| CAGGCAAATTAACAAGCGAT+TGG | 0.550451 | 3.3:+89847417 | MS.gene40342:CDS |
| TCGCCTGTTGATTTGTCGAT+CGG | 0.551582 | 3.3:-89847221 | None:intergenic |
| ACTTCTGATGAAGTTAAAGA+AGG | 0.553964 | 3.3:-89852491 | None:intergenic |
| CAAGTTGGCGTGAAAGTCAC+GGG | 0.555003 | 3.3:+89846806 | MS.gene40342:CDS |
| GGAGGGCAACACCTCTGAGA+AGG | 0.556921 | 3.3:+89847249 | MS.gene40342:CDS |
| TGAAAGATGCTTATGAGCAA+GGG | 0.557385 | 3.3:+89852441 | MS.gene40342:CDS |
| GATGACAGGATAGAAGCAAA+TGG | 0.557406 | 3.3:+89852216 | MS.gene40342:intron |
| CTATCACATTCCTCTAGCGA+TGG | 0.561904 | 3.3:+89847088 | MS.gene40342:CDS |
| ACAAGTTGGCGTGAAAGTCA+CGG | 0.571553 | 3.3:+89846805 | MS.gene40342:CDS |
| TGTCATTAGAAAATTGGAGG+AGG | 0.572214 | 3.3:+89853181 | MS.gene40342:CDS |
| TACTAGTGTCCTTTAAACCA+AGG | 0.577865 | 3.3:-89846952 | None:intergenic |
| CAAATCATATGCAAAATCAA+AGG | 0.578598 | 3.3:+89847494 | MS.gene40342:CDS |
| TAGAGGCAAGGTCTTGTCAC+GGG | 0.584725 | 3.3:-89847002 | None:intergenic |
| CTTGTGCCCCAAGTTTGGAG+AGG | 0.588451 | 3.3:-89847620 | None:intergenic |
| TAAACTCTCTGGTGACAAGT+TGG | 0.593425 | 3.3:+89847390 | MS.gene40342:CDS |
| TGCAGTGTCTAACCAGAATG+AGG | 0.598170 | 3.3:-89853015 | None:intergenic |
| GTCATTAGAAAATTGGAGGA+GGG | 0.609832 | 3.3:+89853182 | MS.gene40342:CDS |
| GTAGGAATATCTAAAATTGG+AGG | 0.612381 | 3.3:+89847121 | MS.gene40342:CDS |
| GAACCATGATGATGATGTGA+AGG | 0.612554 | 3.3:+89847516 | MS.gene40342:CDS |
| GTCCTTTAAACCAAGGCTAG+AGG | 0.612770 | 3.3:-89846945 | None:intergenic |
| CTACAACCTCTCCAAACTTG+GGG | 0.621243 | 3.3:+89847614 | MS.gene40342:CDS |
| CACGGGAAGTAATGAAGCGG+TGG | 0.622523 | 3.3:+89846823 | MS.gene40342:CDS |
| CATTTCCAAACCATCGCTAG+AGG | 0.622890 | 3.3:-89847098 | None:intergenic |
| CGTCGATGATGGTGACGTGA+AGG | 0.626542 | 3.3:+89847327 | MS.gene40342:CDS |
| ACCTCTGAGAAGGATAAGTA+CGG | 0.627205 | 3.3:+89847259 | MS.gene40342:CDS |
| ATGCAAACTAAACTCTCTGG+TGG | 0.635003 | 3.3:+89847571 | MS.gene40342:CDS |
| GACACTAGTAAATCAAATGG+TGG | 0.642365 | 3.3:+89846965 | MS.gene40342:CDS |
| CAAGCAAGATTACAGTGTAA+CGG | 0.642416 | 3.3:+89847639 | MS.gene40342:CDS |
| GTTTCTTGATGTCAAATGGG+CGG | 0.643178 | 3.3:+89853207 | MS.gene40342:CDS |
| ATCCAAAGAGAAAGAGAATG+GGG | 0.645638 | 3.3:+89847024 | MS.gene40342:CDS |
| ATAGAGGCAAGGTCTTGTCA+CGG | 0.649576 | 3.3:-89847003 | None:intergenic |
| AGGCGGACGTGATATTGTTG+GGG | 0.650648 | 3.3:+89847195 | MS.gene40342:CDS |
| ACAAATCAACAGGCGATTGG+GGG | 0.666789 | 3.3:+89847228 | MS.gene40342:CDS |
| ACCGTACTTATCCTTCTCAG+AGG | 0.677863 | 3.3:-89847260 | None:intergenic |
| AGCGATGGTTTGGAAATGGT+AGG | 0.687208 | 3.3:+89847103 | MS.gene40342:CDS |
| AAGATTGATTCAGAAATAGG+CGG | 0.695694 | 3.3:+89847178 | MS.gene40342:CDS |
| AGAATGAGGACTAGAATATG+CGG | 0.713953 | 3.3:-89853001 | None:intergenic |
| AGTCACGGGAAGTAATGAAG+CGG | 0.714780 | 3.3:+89846820 | MS.gene40342:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGCTATATTATTTTATT+AGG | + | chr3.3:89848029-89848048 | MS.gene40342:intron | 10.0% |
| !!! | TAGAATGAATATTTTTTAAA+AGG | - | chr3.3:89848248-89848267 | None:intergenic | 10.0% |
| !!! | TTTTAGTTTGTTTTATAAAT+AGG | - | chr3.3:89851945-89851964 | None:intergenic | 10.0% |
| !! | AAAACTAAAGTAAAAACATA+AGG | - | chr3.3:89850826-89850845 | None:intergenic | 15.0% |
| !! | AAACTAAAGTAAAAACATAA+GGG | - | chr3.3:89850825-89850844 | None:intergenic | 15.0% |
| !! | AAATAATGTTAAAAATGGAA+GGG | + | chr3.3:89847303-89847322 | MS.gene40342:CDS | 15.0% |
| !! | TATTTAGAAGATAGTAAAAT+AGG | - | chr3.3:89849118-89849137 | None:intergenic | 15.0% |
| !! | TGAAAAATAAATTGATTGAA+TGG | - | chr3.3:89851684-89851703 | None:intergenic | 15.0% |
| !! | TTACTATCTTCTAAATATAA+AGG | + | chr3.3:89849121-89849140 | MS.gene40342:intron | 15.0% |
| !!! | CAATATTTTATTTATGATAC+AGG | + | chr3.3:89853116-89853135 | MS.gene40342:intron | 15.0% |
| !!! | TAACTTTTTCAAAATGAATT+TGG | + | chr3.3:89849201-89849220 | MS.gene40342:intron | 15.0% |
| !!! | TTATGTTTTTACTTTAGTTT+TGG | + | chr3.3:89850825-89850844 | MS.gene40342:intron | 15.0% |
| !!! | TTTAGATTCTATCTATTTTT+GGG | - | chr3.3:89851806-89851825 | None:intergenic | 15.0% |
| !!! | TTTTGCTATATTTAAAAGAA+AGG | + | chr3.3:89853145-89853164 | MS.gene40342:CDS | 15.0% |
| !! | AAATGTATAAGAATGTAAAG+TGG | - | chr3.3:89852032-89852051 | None:intergenic | 20.0% |
| !! | AATTTATATAGTCAAAAGCT+TGG | + | chr3.3:89846752-89846771 | MS.gene40342:CDS | 20.0% |
| !! | ACGACAAATAATGTTAAAAA+TGG | + | chr3.3:89847298-89847317 | MS.gene40342:CDS | 20.0% |
| !! | AGCTATTAGGAATATTAATT+AGG | + | chr3.3:89850706-89850725 | MS.gene40342:intron | 20.0% |
| !! | ATCATACATTTAGTATAGTT+AGG | - | chr3.3:89851918-89851937 | None:intergenic | 20.0% |
| !! | ATGAACATAAATTTGAATTG+TGG | + | chr3.3:89850029-89850048 | MS.gene40342:intron | 20.0% |
| !! | ATTCCTAATAGCTAAAATAT+AGG | - | chr3.3:89850699-89850718 | None:intergenic | 20.0% |
| !! | CAAAAATAGATAGAATCTAA+AGG | + | chr3.3:89851805-89851824 | MS.gene40342:intron | 20.0% |
| !! | CAAATAATGTTAAAAATGGA+AGG | + | chr3.3:89847302-89847321 | MS.gene40342:CDS | 20.0% |
| !! | GATAAGAGAATAAATAAATG+AGG | - | chr3.3:89851093-89851112 | None:intergenic | 20.0% |
| !! | GCTATTAGGAATATTAATTA+GGG | + | chr3.3:89850707-89850726 | MS.gene40342:intron | 20.0% |
| !! | GTTTATAATATGCAAAAATG+TGG | + | chr3.3:89850103-89850122 | MS.gene40342:intron | 20.0% |
| !! | TAACACTATGAAAAATCTAA+TGG | - | chr3.3:89848317-89848336 | None:intergenic | 20.0% |
| !! | TTAAAAAGAAAACTTACCAT+TGG | - | chr3.3:89852248-89852267 | None:intergenic | 20.0% |
| !! | TTAATTGTTCAATTTGAAAG+TGG | - | chr3.3:89851453-89851472 | None:intergenic | 20.0% |
| !!! | ATTTGTACCATTTATTTTTG+GGG | + | chr3.3:89852742-89852761 | MS.gene40342:intron | 20.0% |
| !!! | CATAATTTTGTTGAAAAGTT+TGG | - | chr3.3:89850367-89850386 | None:intergenic | 20.0% |
| !!! | CATTTGTACCATTTATTTTT+GGG | + | chr3.3:89852741-89852760 | MS.gene40342:intron | 20.0% |
| !!! | CTAAAATGGTAAAAGTATAA+GGG | - | chr3.3:89848209-89848228 | None:intergenic | 20.0% |
| !!! | CTTTAGATTCTATCTATTTT+TGG | - | chr3.3:89851807-89851826 | None:intergenic | 20.0% |
| !!! | GCTTCTTTTAAAGAAAAATA+TGG | + | chr3.3:89847451-89847470 | MS.gene40342:CDS | 20.0% |
| !!! | TAAATCACAGGATATTATTT+TGG | + | chr3.3:89852936-89852955 | MS.gene40342:intron | 20.0% |
| !!! | TATAAAGAAAAGAAAGCATA+TGG | + | chr3.3:89849984-89850003 | MS.gene40342:intron | 20.0% |
| !!! | TGCTATATTATTTTATTAGG+TGG | + | chr3.3:89848032-89848051 | MS.gene40342:intron | 20.0% |
| !!! | TTAGATTCTATCTATTTTTG+GGG | - | chr3.3:89851805-89851824 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTTTGCAATTCAA+TGG | + | chr3.3:89851498-89851517 | MS.gene40342:intron | 20.0% |
| !!! | TTTAGTTTTGGATTTACTTA+CGG | + | chr3.3:89850837-89850856 | MS.gene40342:intron | 20.0% |
| ! | AAAAAATCCTTAAACTTGAG+TGG | - | chr3.3:89848474-89848493 | None:intergenic | 25.0% |
| ! | AAAACCCTTTCCTTTAATTA+GGG | - | chr3.3:89851261-89851280 | None:intergenic | 25.0% |
| ! | AACTCAAATCATGAAGTTAT+TGG | + | chr3.3:89850441-89850460 | MS.gene40342:intron | 25.0% |
| ! | ACAACATAAACAATTTCACA+AGG | - | chr3.3:89851198-89851217 | None:intergenic | 25.0% |
| ! | AGAATCTGTCATTAGAAAAT+TGG | + | chr3.3:89853175-89853194 | MS.gene40342:CDS | 25.0% |
| ! | ATTGAAAAAGATCACATGTT+GGG | + | chr3.3:89850280-89850299 | MS.gene40342:intron | 25.0% |
| ! | ATTGCAAAAACTTAAAGAAC+AGG | - | chr3.3:89851494-89851513 | None:intergenic | 25.0% |
| ! | ATTTGAATTGTGGTGAAATT+TGG | + | chr3.3:89850039-89850058 | MS.gene40342:intron | 25.0% |
| ! | CAAATCATATGCAAAATCAA+AGG | + | chr3.3:89847494-89847513 | MS.gene40342:CDS | 25.0% |
| ! | CAAATCCATATTTCAATTTG+AGG | - | chr3.3:89851576-89851595 | None:intergenic | 25.0% |
| ! | CATTTGATTGAAAAACTAGA+TGG | + | chr3.3:89846872-89846891 | MS.gene40342:CDS | 25.0% |
| ! | GAGTAAATCTCTATATGATT+AGG | - | chr3.3:89849362-89849381 | None:intergenic | 25.0% |
| ! | TACATATATAAGATATCCTC+AGG | + | chr3.3:89849515-89849534 | MS.gene40342:intron | 25.0% |
| ! | TAGTTATGTGAAATGTTTGT+GGG | + | chr3.3:89849802-89849821 | MS.gene40342:intron | 25.0% |
| ! | TATTGCTATGGGAAAATTAT+TGG | - | chr3.3:89850775-89850794 | None:intergenic | 25.0% |
| ! | TGCAACAATTTGTAAAGTTA+GGG | + | chr3.3:89848001-89848020 | MS.gene40342:intron | 25.0% |
| ! | TGTTAAACTAGTAAGGTATA+AGG | - | chr3.3:89847744-89847763 | None:intergenic | 25.0% |
| ! | TTAATCACCCCAAAAATAAA+TGG | - | chr3.3:89852752-89852771 | None:intergenic | 25.0% |
| ! | TTAGTAAGATAACAACAAAG+TGG | - | chr3.3:89852882-89852901 | None:intergenic | 25.0% |
| ! | TTAGTTATGTGAAATGTTTG+TGG | + | chr3.3:89849801-89849820 | MS.gene40342:intron | 25.0% |
| ! | TTATTAGATCTATGTTTCTC+TGG | - | chr3.3:89852056-89852075 | None:intergenic | 25.0% |
| ! | TTGCAACAATTTGTAAAGTT+AGG | + | chr3.3:89848000-89848019 | MS.gene40342:intron | 25.0% |
| ! | TTGGACTTAAAAATTATCAC+AGG | - | chr3.3:89848120-89848139 | None:intergenic | 25.0% |
| ! | TTGTGAAATTGTTTATGTTG+TGG | + | chr3.3:89851197-89851216 | MS.gene40342:intron | 25.0% |
| ! | TTTATTTGATAGACTCTTGT+AGG | + | chr3.3:89852288-89852307 | MS.gene40342:intron | 25.0% |
| !! | AATAATTTTCCCATAGCAAT+AGG | + | chr3.3:89850774-89850793 | MS.gene40342:intron | 25.0% |
| !! | ATAAAGATTCGAAGTTGTTT+TGG | - | chr3.3:89851303-89851322 | None:intergenic | 25.0% |
| !! | ATGGTAGGAATATCTAAAAT+TGG | + | chr3.3:89847118-89847137 | MS.gene40342:CDS | 25.0% |
| !! | CCTAAAATGGTAAAAGTATA+AGG | - | chr3.3:89848210-89848229 | None:intergenic | 25.0% |
| !! | CCTTATACTTTTACCATTTT+AGG | + | chr3.3:89848207-89848226 | MS.gene40342:intron | 25.0% |
| !! | GCAACTTTTGAATTGTTAAA+GGG | + | chr3.3:89848063-89848082 | MS.gene40342:intron | 25.0% |
| !!! | AATCTCAGTTTTATGTATCT+CGG | + | chr3.3:89850080-89850099 | MS.gene40342:intron | 25.0% |
| !!! | ATCCTTGTTATTTATAACCA+AGG | + | chr3.3:89849292-89849311 | MS.gene40342:intron | 25.0% |
| !!! | CAATCTTTAGCTTTTTTGAA+GGG | - | chr3.3:89847357-89847376 | None:intergenic | 25.0% |
| !!! | CGCTTAATTTATTTTCATGT+TGG | - | chr3.3:89848715-89848734 | None:intergenic | 25.0% |
| !!! | CTTTGTAGTTGTGTTTTATT+TGG | + | chr3.3:89852698-89852717 | MS.gene40342:intron | 25.0% |
| !!! | GCATTTGTACCATTTATTTT+TGG | + | chr3.3:89852740-89852759 | MS.gene40342:intron | 25.0% |
| !!! | GTACTATTTTAAGACATGTT+GGG | + | chr3.3:89850241-89850260 | MS.gene40342:intron | 25.0% |
| !!! | TCAATCTTTAGCTTTTTTGA+AGG | - | chr3.3:89847358-89847377 | None:intergenic | 25.0% |
| !!! | TCCTTGTTATTTATAACCAA+GGG | + | chr3.3:89849293-89849312 | MS.gene40342:intron | 25.0% |
| !!! | TGTACTATTTTAAGACATGT+TGG | + | chr3.3:89850240-89850259 | MS.gene40342:intron | 25.0% |
| !!! | TGTTTTATTTGGAATAGAAG+AGG | + | chr3.3:89852709-89852728 | MS.gene40342:intron | 25.0% |
| !!! | TTGCCTATATTTTAGCTATT+AGG | + | chr3.3:89850693-89850712 | MS.gene40342:intron | 25.0% |
| !!! | TTTTTTATCTTTCCGGAAAT+CGG | + | chr3.3:89852331-89852350 | MS.gene40342:intron | 25.0% |
| AAAGAAGATCCTAATAGACT+TGG | - | chr3.3:89851656-89851675 | None:intergenic | 30.0% | |
| AAAGATGATTCAGTACTTCT+TGG | - | chr3.3:89851119-89851138 | None:intergenic | 30.0% | |
| AAGGACACTAGTAAATCAAA+TGG | + | chr3.3:89846962-89846981 | MS.gene40342:CDS | 30.0% | |
| AAGTAAAAACATAAGGGCTT+AGG | - | chr3.3:89850819-89850838 | None:intergenic | 30.0% | |
| AATCAGTTTGACAAAGACAT+GGG | + | chr3.3:89849005-89849024 | MS.gene40342:intron | 30.0% | |
| AATGAATTTGGTCGTGTTAA+TGG | + | chr3.3:89849213-89849232 | MS.gene40342:intron | 30.0% | |
| ACTTCTGATGAAGTTAAAGA+AGG | - | chr3.3:89852494-89852513 | None:intergenic | 30.0% | |
| AGATAGCTGTTATAGTGTAA+TGG | + | chr3.3:89847915-89847934 | MS.gene40342:intron | 30.0% | |
| AGCAAGTATGAAGAAGATAA+TGG | - | chr3.3:89851612-89851631 | None:intergenic | 30.0% | |
| AGTAAAAACATAAGGGCTTA+GGG | - | chr3.3:89850818-89850837 | None:intergenic | 30.0% | |
| AGTCAAATCCCTTGATTATA+GGG | + | chr3.3:89849321-89849340 | MS.gene40342:intron | 30.0% | |
| AGTGGATGAAATTGTCATTA+AGG | - | chr3.3:89852864-89852883 | None:intergenic | 30.0% | |
| AGTTATGTGAAATGTTTGTG+GGG | + | chr3.3:89849803-89849822 | MS.gene40342:intron | 30.0% | |
| AGTTCTTATCCCTATAATCA+AGG | - | chr3.3:89849333-89849352 | None:intergenic | 30.0% | |
| AGTTGAAGGAGGAATTAAAT+GGG | + | chr3.3:89850922-89850941 | MS.gene40342:intron | 30.0% | |
| ATAATATCATTCGAGCTCAA+AGG | + | chr3.3:89850210-89850229 | MS.gene40342:intron | 30.0% | |
| ATAGAATCTAAAGGAGAGAA+TGG | + | chr3.3:89851814-89851833 | MS.gene40342:intron | 30.0% | |
| ATCAATCTTGGACTTCAAAA+CGG | - | chr3.3:89847167-89847186 | None:intergenic | 30.0% | |
| ATCACAGGACAAACAATTAA+AGG | - | chr3.3:89848105-89848124 | None:intergenic | 30.0% | |
| ATCTGTCATTAGAAAATTGG+AGG | + | chr3.3:89853178-89853197 | MS.gene40342:CDS | 30.0% | |
| ATGAATTTGGTCGTGTTAAT+GGG | + | chr3.3:89849214-89849233 | MS.gene40342:intron | 30.0% | |
| ATGCAAAAATGTGGAAATAG+AGG | + | chr3.3:89850112-89850131 | MS.gene40342:intron | 30.0% | |
| ATTATTGCCTATACGAATCT+TGG | - | chr3.3:89848164-89848183 | None:intergenic | 30.0% | |
| ATTGAAACACAGATAAGAAG+AGG | - | chr3.3:89853100-89853119 | None:intergenic | 30.0% | |
| CAAAACCCTTTCCTTTAATT+AGG | - | chr3.3:89851262-89851281 | None:intergenic | 30.0% | |
| CAACAATTTGTAAAGTTAGG+GGG | + | chr3.3:89848003-89848022 | MS.gene40342:intron | 30.0% | |
| CAACACCTCAAATTGAAATA+TGG | + | chr3.3:89851568-89851587 | MS.gene40342:intron | 30.0% | |
| CACAACTACAAAGAAAAACA+AGG | - | chr3.3:89852691-89852710 | None:intergenic | 30.0% | |
| CACTCGATCAAAACTAATAA+GGG | - | chr3.3:89848350-89848369 | None:intergenic | 30.0% | |
| CATTGAAAAAGATCACATGT+TGG | + | chr3.3:89850279-89850298 | MS.gene40342:intron | 30.0% | |
| CTAATCATATCTTCTATGAG+CGG | - | chr3.3:89849660-89849679 | None:intergenic | 30.0% | |
| CTATATGATTCTCTTCTCTT+CGG | - | chr3.3:89851854-89851873 | None:intergenic | 30.0% | |
| CTCATCACATAAAACATTTG+AGG | - | chr3.3:89848597-89848616 | None:intergenic | 30.0% | |
| GAAACTAAACTTAAGTGGTT+TGG | + | chr3.3:89848844-89848863 | MS.gene40342:intron | 30.0% | |
| GAAGAGAATCATATAGATAG+TGG | + | chr3.3:89851858-89851877 | MS.gene40342:intron | 30.0% | |
| GAATGTATGCATTAATGTGT+TGG | + | chr3.3:89851141-89851160 | MS.gene40342:intron | 30.0% | |
| GACAATCATTGTATTCAAGT+AGG | + | chr3.3:89850140-89850159 | MS.gene40342:intron | 30.0% | |
| GCAACAATTTGTAAAGTTAG+GGG | + | chr3.3:89848002-89848021 | MS.gene40342:intron | 30.0% | |
| GCAAGTATGAAGAAGATAAT+GGG | - | chr3.3:89851611-89851630 | None:intergenic | 30.0% | |
| GGAACATTGTTAAACTAGTA+AGG | - | chr3.3:89847751-89847770 | None:intergenic | 30.0% | |
| GGTAATAATCATTCCAAAAC+CGG | + | chr3.3:89852517-89852536 | MS.gene40342:intron | 30.0% | |
| GTGGATGAAATTGTCATTAA+GGG | - | chr3.3:89852863-89852882 | None:intergenic | 30.0% | |
| GTTCTTATCCCTATAATCAA+GGG | - | chr3.3:89849332-89849351 | None:intergenic | 30.0% | |
| GTTTAACAATGTTCCAATGA+AGG | + | chr3.3:89847756-89847775 | MS.gene40342:intron | 30.0% | |
| TAAACCATAGAATTCAACCT+GGG | + | chr3.3:89848552-89848571 | MS.gene40342:intron | 30.0% | |
| TATCCAAAGAGAAAGAGAAT+GGG | + | chr3.3:89847023-89847042 | MS.gene40342:CDS | 30.0% | |
| TATCTATACCAAATTGCTAG+AGG | - | chr3.3:89849541-89849560 | None:intergenic | 30.0% | |
| TCCCTTGGTTATAAATAACA+AGG | - | chr3.3:89849297-89849316 | None:intergenic | 30.0% | |
| TCGAATCTTTATGACATTGA+TGG | + | chr3.3:89851311-89851330 | MS.gene40342:intron | 30.0% | |
| TCGCAAGCATAAAATCAAAT+TGG | - | chr3.3:89850516-89850535 | None:intergenic | 30.0% | |
| TGCAAAAATGTGGAAATAGA+GGG | + | chr3.3:89850113-89850132 | MS.gene40342:intron | 30.0% | |
| TGGTAGAAACTAAACTTAAG+TGG | + | chr3.3:89848839-89848858 | MS.gene40342:intron | 30.0% | |
| TTATATAGTCAAAAGCTTGG+CGG | + | chr3.3:89846755-89846774 | MS.gene40342:CDS | 30.0% | |
| TTATGAGATCAAAGCAAATG+CGG | + | chr3.3:89850382-89850401 | MS.gene40342:intron | 30.0% | |
| TTCAGATTCTTGTAGGTTAT+GGG | + | chr3.3:89852544-89852563 | MS.gene40342:intron | 30.0% | |
| TTTCAGATTCTTGTAGGTTA+TGG | + | chr3.3:89852543-89852562 | MS.gene40342:intron | 30.0% | |
| ! | AACAGAAAACGAGACAATTT+TGG | - | chr3.3:89848139-89848158 | None:intergenic | 30.0% |
| ! | AAGATTGATTCAGAAATAGG+CGG | + | chr3.3:89847178-89847197 | MS.gene40342:CDS | 30.0% |
| ! | CGCAACTTTTGAATTGTTAA+AGG | + | chr3.3:89848062-89848081 | MS.gene40342:intron | 30.0% |
| ! | GTAGGAATATCTAAAATTGG+AGG | + | chr3.3:89847121-89847140 | MS.gene40342:CDS | 30.0% |
| ! | TCATCATTGGTTGAATTCTA+TGG | - | chr3.3:89848658-89848677 | None:intergenic | 30.0% |
| ! | TCATGATTTGAGTTACAGAT+TGG | - | chr3.3:89850435-89850454 | None:intergenic | 30.0% |
| ! | TCCAAGATTGATTCAGAAAT+AGG | + | chr3.3:89847175-89847194 | MS.gene40342:CDS | 30.0% |
| ! | TCTACCATCTTTTCTACTAT+AGG | - | chr3.3:89848826-89848845 | None:intergenic | 30.0% |
| ! | TTAAAGGCTCAAGTGTATTT+TGG | - | chr3.3:89848089-89848108 | None:intergenic | 30.0% |
| ! | TTTAACTTCATCAGAAGTAC+AGG | + | chr3.3:89852496-89852515 | MS.gene40342:CDS | 30.0% |
| ! | TTTTGTTGCTAATTGAGACA+AGG | + | chr3.3:89851757-89851776 | MS.gene40342:intron | 30.0% |
| !! | AATTTGATTTTATGCTTGCG+AGG | + | chr3.3:89850515-89850534 | MS.gene40342:intron | 30.0% |
| !! | ATCTCAGTTTTATGTATCTC+GGG | + | chr3.3:89850081-89850100 | MS.gene40342:intron | 30.0% |
| !! | CAAGCTTTAAAGACACAATT+GGG | - | chr3.3:89847823-89847842 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr3.3:89850606-89850625 | MS.gene40342:intron | 30.0% |
| !! | TGCAGTTTTATCTTTGAACT+TGG | + | chr3.3:89849155-89849174 | MS.gene40342:intron | 30.0% |
| !! | TTTGGGGTGATTAACTTTTA+AGG | + | chr3.3:89852758-89852777 | MS.gene40342:intron | 30.0% |
| !!! | AATCTTTAGCTTTTTCGAAG+GGG | - | chr3.3:89847545-89847564 | None:intergenic | 30.0% |
| !!! | AGACAAGTTTTAAAAGCGTA+TGG | - | chr3.3:89851058-89851077 | None:intergenic | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr3.3:89850612-89850631 | MS.gene40342:intron | 30.0% |
| !!! | CAATCTTTAGCTTTTTCGAA+GGG | - | chr3.3:89847546-89847565 | None:intergenic | 30.0% |
| !!! | GTTGCTCTTTTTTATCTTTC+CGG | + | chr3.3:89852324-89852343 | MS.gene40342:intron | 30.0% |
| !!! | GTTTCTCTCGTAGTTTTATT+AGG | - | chr3.3:89848963-89848982 | None:intergenic | 30.0% |
| !!! | TCAATCTTTAGCTTTTTCGA+AGG | - | chr3.3:89847547-89847566 | None:intergenic | 30.0% |
| !!! | TCACAGGATATTATTTTGGA+TGG | + | chr3.3:89852940-89852959 | MS.gene40342:intron | 30.0% |
| !!! | TTAAAGGAAAGGGTTTTGTT+AGG | + | chr3.3:89851264-89851283 | MS.gene40342:intron | 30.0% |
| !!! | TTTTTTACGTTTTCAGCCTT+GGG | + | chr3.3:89852409-89852428 | MS.gene40342:intron | 30.0% |
| AAGCAAATGGTTTAAGCCAA+TGG | + | chr3.3:89852229-89852248 | MS.gene40342:CDS | 35.0% | |
| AATCTGATAGGTAATCTCGT+AGG | - | chr3.3:89851526-89851545 | None:intergenic | 35.0% | |
| AATCTTTATCCCACTAAGTG+GGG | - | chr3.3:89849069-89849088 | None:intergenic | 35.0% | |
| AATGACCACATTAGAGAGTT+AGG | + | chr3.3:89848794-89848813 | MS.gene40342:intron | 35.0% | |
| AATGTCGTGAAATACTAGCA+TGG | - | chr3.3:89847863-89847882 | None:intergenic | 35.0% | |
| AATTAAGCGTAGTAGAGATG+AGG | + | chr3.3:89848726-89848745 | MS.gene40342:intron | 35.0% | |
| ACAACAAACCTATTGAAGTG+TGG | + | chr3.3:89850307-89850326 | MS.gene40342:intron | 35.0% | |
| ACAATCCATCTTTATGTGCT+TGG | + | chr3.3:89849633-89849652 | MS.gene40342:intron | 35.0% | |
| ACAATGCAAACTAAACTCTC+TGG | + | chr3.3:89847568-89847587 | MS.gene40342:CDS | 35.0% | |
| ACACAGATAAGAAGAGGAAT+AGG | - | chr3.3:89853094-89853113 | None:intergenic | 35.0% | |
| ACCCAGTGTATTCTATAGTA+AGG | + | chr3.3:89848882-89848901 | MS.gene40342:intron | 35.0% | |
| ACCTCTATTGAGACCTAAAA+TGG | - | chr3.3:89848223-89848242 | None:intergenic | 35.0% | |
| ACGTCAAAGATATTAGAGAC+AGG | - | chr3.3:89852909-89852928 | None:intergenic | 35.0% | |
| AGAATGAGGACTAGAATATG+CGG | - | chr3.3:89853004-89853023 | None:intergenic | 35.0% | |
| AGACTATTCTAACTAGCAAC+AGG | + | chr3.3:89851991-89852010 | MS.gene40342:intron | 35.0% | |
| AGAGATGTCCTATGTTTGTT+GGG | + | chr3.3:89851373-89851392 | MS.gene40342:intron | 35.0% | |
| AGTTCTACTTGAAGAGTTGA+AGG | + | chr3.3:89850908-89850927 | MS.gene40342:intron | 35.0% | |
| ATCCAAAGAGAAAGAGAATG+GGG | + | chr3.3:89847024-89847043 | MS.gene40342:CDS | 35.0% | |
| ATGAAAGATGCTTATGAGCA+AGG | + | chr3.3:89852440-89852459 | MS.gene40342:CDS | 35.0% | |
| ATGAAGGACGTTGTCAAAAT+AGG | + | chr3.3:89847772-89847791 | MS.gene40342:intron | 35.0% | |
| ATGACCACATTAGAGAGTTA+GGG | + | chr3.3:89848795-89848814 | MS.gene40342:intron | 35.0% | |
| ATTGAAGTGTGGAAAAACCT+AGG | + | chr3.3:89850318-89850337 | MS.gene40342:intron | 35.0% | |
| CAAAGATATTAGAGACAGGA+AGG | - | chr3.3:89852905-89852924 | None:intergenic | 35.0% | |
| CAAGCAAATAGTTACATCCT+TGG | - | chr3.3:89849589-89849608 | None:intergenic | 35.0% | |
| CAAGCAAGATTACAGTGTAA+CGG | + | chr3.3:89847639-89847658 | MS.gene40342:CDS | 35.0% | |
| CAAGCCCTAATTAAAGGAAA+GGG | + | chr3.3:89851254-89851273 | MS.gene40342:intron | 35.0% | |
| CAAGGATGTAACTATTTGCT+TGG | + | chr3.3:89849587-89849606 | MS.gene40342:intron | 35.0% | |
| CAATCAGTTTGACAAAGACA+TGG | + | chr3.3:89849004-89849023 | MS.gene40342:intron | 35.0% | |
| CAATCTTTATCCCACTAAGT+GGG | - | chr3.3:89849070-89849089 | None:intergenic | 35.0% | |
| CAGTCAAATCCCTTGATTAT+AGG | + | chr3.3:89849320-89849339 | MS.gene40342:intron | 35.0% | |
| CCAAAAACAATTGCGTATTG+AGG | - | chr3.3:89847964-89847983 | None:intergenic | 35.0% | |
| CCACTCGATCAAAACTAATA+AGG | - | chr3.3:89848351-89848370 | None:intergenic | 35.0% | |
| CTACAAGAATCTGAAAATGC+CGG | - | chr3.3:89852539-89852558 | None:intergenic | 35.0% | |
| CTAGTTCATCGATAGTGTAT+AGG | - | chr3.3:89848288-89848307 | None:intergenic | 35.0% | |
| CTATCCAAAGAGAAAGAGAA+TGG | + | chr3.3:89847022-89847041 | MS.gene40342:CDS | 35.0% | |
| CTCTTGATACCAAGTCTATT+AGG | + | chr3.3:89851644-89851663 | MS.gene40342:intron | 35.0% | |
| CTGTCATCAAGTGAAAGAAA+AGG | - | chr3.3:89852204-89852223 | None:intergenic | 35.0% | |
| GAAAGAGAATGGGGTTAATA+AGG | + | chr3.3:89847033-89847052 | MS.gene40342:CDS | 35.0% | |
| GACACTAGTAAATCAAATGG+TGG | + | chr3.3:89846965-89846984 | MS.gene40342:CDS | 35.0% | |
| GAGTTGAAGGAGGAATTAAA+TGG | + | chr3.3:89850921-89850940 | MS.gene40342:intron | 35.0% | |
| GCAAAAATGTGGAAATAGAG+GGG | + | chr3.3:89850114-89850133 | MS.gene40342:intron | 35.0% | |
| GCCTTACTATAGAATACACT+GGG | - | chr3.3:89848886-89848905 | None:intergenic | 35.0% | |
| GGTTTAGATGAGAAACAAGT+TGG | + | chr3.3:89846791-89846810 | MS.gene40342:CDS | 35.0% | |
| GTAAACCATAGAATTCAACC+TGG | + | chr3.3:89848551-89848570 | MS.gene40342:intron | 35.0% | |
| GTATTCTATAGTAAGGCGTA+AGG | + | chr3.3:89848889-89848908 | MS.gene40342:intron | 35.0% | |
| GTCATTAGAAAATTGGAGGA+GGG | + | chr3.3:89853182-89853201 | MS.gene40342:CDS | 35.0% | |
| GTTGCTAGTTAGAATAGTCT+AGG | - | chr3.3:89851991-89852010 | None:intergenic | 35.0% | |
| TAAAGACACAATTGGGATGA+AGG | - | chr3.3:89847816-89847835 | None:intergenic | 35.0% | |
| TACGAGAGAAACTATCAAGA+AGG | + | chr3.3:89848971-89848990 | MS.gene40342:intron | 35.0% | |
| TACTAGTGTCCTTTAAACCA+AGG | - | chr3.3:89846955-89846974 | None:intergenic | 35.0% | |
| TATGAGATCAAAGCAAATGC+GGG | + | chr3.3:89850383-89850402 | MS.gene40342:intron | 35.0% | |
| TCAAGCCCTAATTAAAGGAA+AGG | + | chr3.3:89851253-89851272 | MS.gene40342:intron | 35.0% | |
| TCACTGCTTGTGAACTTATT+TGG | - | chr3.3:89849771-89849790 | None:intergenic | 35.0% | |
| TCAGATTCTTGTAGGTTATG+GGG | + | chr3.3:89852545-89852564 | MS.gene40342:intron | 35.0% | |
| TGAAAGATGCTTATGAGCAA+GGG | + | chr3.3:89852441-89852460 | MS.gene40342:CDS | 35.0% | |
| TGAAGGACGTTGTCAAAATA+GGG | + | chr3.3:89847773-89847792 | MS.gene40342:intron | 35.0% | |
| TGCACCTATAGTAGAAAAGA+TGG | + | chr3.3:89848819-89848838 | MS.gene40342:intron | 35.0% | |
| TGTCATTAGAAAATTGGAGG+AGG | + | chr3.3:89853181-89853200 | MS.gene40342:CDS | 35.0% | |
| TTCAATTTGAAAGTGGTGAG+AGG | - | chr3.3:89851446-89851465 | None:intergenic | 35.0% | |
| TTCTAACTCCTCAAAAGAGA+AGG | + | chr3.3:89849887-89849906 | MS.gene40342:intron | 35.0% | |
| TTCTCTTTCTCTTTGGATAG+AGG | - | chr3.3:89847022-89847041 | None:intergenic | 35.0% | |
| TTGAGGAGTTAGAAGTTGTT+TGG | - | chr3.3:89849881-89849900 | None:intergenic | 35.0% | |
| TTTGCAAAAACCATGCATCT+CGG | - | chr3.3:89850882-89850901 | None:intergenic | 35.0% | |
| ! | AATGCAAACCTTCTCTTTTG+AGG | - | chr3.3:89849898-89849917 | None:intergenic | 35.0% |
| ! | AATGTAGGTTGGAGAGATAA+GGG | - | chr3.3:89849845-89849864 | None:intergenic | 35.0% |
| ! | AGGTTTTTCCACACTTCAAT+AGG | - | chr3.3:89850318-89850337 | None:intergenic | 35.0% |
| ! | CCTCAATACGCAATTGTTTT+TGG | + | chr3.3:89847961-89847980 | MS.gene40342:intron | 35.0% |
| ! | CTGTTTTCCAAGATTCGTAT+AGG | + | chr3.3:89848154-89848173 | MS.gene40342:intron | 35.0% |
| ! | CTTCAAAACGGTCTTATCAA+TGG | - | chr3.3:89847155-89847174 | None:intergenic | 35.0% |
| ! | GACGTACTTTTCTAAATCAC+AGG | + | chr3.3:89852924-89852943 | MS.gene40342:intron | 35.0% |
| ! | GTTGATTCTAAGCCATCATT+GGG | + | chr3.3:89846911-89846930 | MS.gene40342:CDS | 35.0% |
| ! | GTTGTATGAGTTGAAAGCAT+AGG | - | chr3.3:89851552-89851571 | None:intergenic | 35.0% |
| ! | TAGAGATGAGGATTTTGTGT+TGG | + | chr3.3:89848738-89848757 | MS.gene40342:intron | 35.0% |
| ! | TTGGAGAGATAAGGGTTTTT+GGG | - | chr3.3:89849837-89849856 | None:intergenic | 35.0% |
| ! | TTTTGTTCCCCAACAAACAT+AGG | - | chr3.3:89851384-89851403 | None:intergenic | 35.0% |
| !! | ACCATTTTAGGTCTCAATAG+AGG | + | chr3.3:89848219-89848238 | MS.gene40342:intron | 35.0% |
| !! | ACTCTAGAGTGGTTAATTTG+TGG | + | chr3.3:89852639-89852658 | MS.gene40342:intron | 35.0% |
| !! | ACTTCAATAGGTTTGTTGTC+TGG | - | chr3.3:89850306-89850325 | None:intergenic | 35.0% |
| !! | ACTTGTGCTGCTTGAAAATT+TGG | + | chr3.3:89852466-89852485 | MS.gene40342:CDS | 35.0% |
| !! | ATTTTGACAACGTCCTTCAT+TGG | - | chr3.3:89847772-89847791 | None:intergenic | 35.0% |
| !! | CCAAGCTTTAAAGACACAAT+TGG | - | chr3.3:89847824-89847843 | None:intergenic | 35.0% |
| !! | CCAATTGTGTCTTTAAAGCT+TGG | + | chr3.3:89847821-89847840 | MS.gene40342:intron | 35.0% |
| !! | CTCTAGAGTGGTTAATTTGT+GGG | + | chr3.3:89852640-89852659 | MS.gene40342:intron | 35.0% |
| !! | CTTTTCTTTCACTTGATGAC+AGG | + | chr3.3:89852202-89852221 | MS.gene40342:intron | 35.0% |
| !! | GAAAGTACCACTCAAGTTTA+AGG | + | chr3.3:89848464-89848483 | MS.gene40342:intron | 35.0% |
| !! | GCCTATTTCTGAATCAATCT+TGG | - | chr3.3:89847179-89847198 | None:intergenic | 35.0% |
| !! | GCTGTTTCTTGATGTCAAAT+GGG | + | chr3.3:89853204-89853223 | MS.gene40342:CDS | 35.0% |
| !! | GGGAGTGTTAAGATATGTAT+AGG | - | chr3.3:89849410-89849429 | None:intergenic | 35.0% |
| !! | TCTAGAGTGGTTAATTTGTG+GGG | + | chr3.3:89852641-89852660 | MS.gene40342:intron | 35.0% |
| !! | TGTTGATTCTAAGCCATCAT+TGG | + | chr3.3:89846910-89846929 | MS.gene40342:CDS | 35.0% |
| !!! | CCTTATTAGTTTTGATCGAG+TGG | + | chr3.3:89848348-89848367 | MS.gene40342:intron | 35.0% |
| !!! | CTTTTTTACGTTTTCAGCCT+TGG | + | chr3.3:89852408-89852427 | MS.gene40342:intron | 35.0% |
| !!! | GCAACTTGCATCTCTTTTTT+TGG | - | chr3.3:89850487-89850506 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGGTTTGTTGTTG+AGG | - | chr3.3:89851290-89851309 | None:intergenic | 35.0% |
| AACCCCATTCTCTTTCTCTT+TGG | - | chr3.3:89847029-89847048 | None:intergenic | 40.0% | |
| AAGCATAGGAGGAATCTGAT+AGG | - | chr3.3:89851538-89851557 | None:intergenic | 40.0% | |
| ACAACGTCAGTTAAACTCTC+TGG | + | chr3.3:89847379-89847398 | MS.gene40342:CDS | 40.0% | |
| ACATATATGCACCACCATGA+CGG | - | chr3.3:89849432-89849451 | None:intergenic | 40.0% | |
| ACCATAGAATTCAACCTGAG+TGG | + | chr3.3:89848403-89848422 | MS.gene40342:intron | 40.0% | |
| AGATGAGCCTTAGAAACGTA+TGG | + | chr3.3:89850952-89850971 | MS.gene40342:intron | 40.0% | |
| ATGCAAACTAAACTCTCTGG+TGG | + | chr3.3:89847571-89847590 | MS.gene40342:CDS | 40.0% | |
| CAATTGCATTGTCCGATTTC+CGG | - | chr3.3:89852346-89852365 | None:intergenic | 40.0% | |
| CAGGCAAATTAACAAGCGAT+TGG | + | chr3.3:89847417-89847436 | MS.gene40342:CDS | 40.0% | |
| CAGTCTCAAGCCCTAATTAA+AGG | + | chr3.3:89851248-89851267 | MS.gene40342:intron | 40.0% | |
| CATCAAGTTCCAATCTGTTC+AGG | - | chr3.3:89851169-89851188 | None:intergenic | 40.0% | |
| CCAATCTTTATCCCACTAAG+TGG | - | chr3.3:89849071-89849090 | None:intergenic | 40.0% | |
| CCACTTAGTGGGATAAAGAT+TGG | + | chr3.3:89849068-89849087 | MS.gene40342:intron | 40.0% | |
| CGACATTTGTGCTTTGTCAT+AGG | + | chr3.3:89847876-89847895 | MS.gene40342:intron | 40.0% | |
| CGCCTTACTATAGAATACAC+TGG | - | chr3.3:89848887-89848906 | None:intergenic | 40.0% | |
| CTACATAGGATTCAACATGC+TGG | - | chr3.3:89852619-89852638 | None:intergenic | 40.0% | |
| CTGATCATTAGAGATCACCA+AGG | + | chr3.3:89849569-89849588 | MS.gene40342:intron | 40.0% | |
| CTTCCTTCACATCATCATCA+TGG | - | chr3.3:89847522-89847541 | None:intergenic | 40.0% | |
| CTTTAATTAGGGCTTGAGAC+TGG | - | chr3.3:89851250-89851269 | None:intergenic | 40.0% | |
| GAGAGATGTCCTATGTTTGT+TGG | + | chr3.3:89851372-89851391 | MS.gene40342:intron | 40.0% | |
| GATGACAGGATAGAAGCAAA+TGG | + | chr3.3:89852216-89852235 | MS.gene40342:intron | 40.0% | |
| GCAAATTAACAAGCGATTGG+AGG | + | chr3.3:89847420-89847439 | MS.gene40342:CDS | 40.0% | |
| GCATATTCTAGTCCTCATTC+TGG | + | chr3.3:89853003-89853022 | MS.gene40342:CDS | 40.0% | |
| GCTAGAGGAATGTGATAGTT+TGG | - | chr3.3:89847086-89847105 | None:intergenic | 40.0% | |
| GGTGATCTCTAATGATCAGT+TGG | - | chr3.3:89849568-89849587 | None:intergenic | 40.0% | |
| GGTTGAAACAACTGCTTGAT+GGG | - | chr3.3:89849750-89849769 | None:intergenic | 40.0% | |
| GTCTCGTAGATCATCATCAT+TGG | - | chr3.3:89848671-89848690 | None:intergenic | 40.0% | |
| GTGAGAGGACATAACAGAAA+AGG | - | chr3.3:89851431-89851450 | None:intergenic | 40.0% | |
| TAAACTCTCTGGTGACAAGT+TGG | + | chr3.3:89847390-89847409 | MS.gene40342:CDS | 40.0% | |
| TAGAAGTTGTTTGGCGAGTT+GGG | - | chr3.3:89849872-89849891 | None:intergenic | 40.0% | |
| TATATGTGTGTGTGTGTGTG+CGG | + | chr3.3:89849445-89849464 | MS.gene40342:intron | 40.0% | |
| TCTAAAGGAGAGAATGGTGA+TGG | + | chr3.3:89851820-89851839 | MS.gene40342:intron | 40.0% | |
| TCTACAACCTCTCCAAACTT+GGG | + | chr3.3:89847613-89847632 | MS.gene40342:CDS | 40.0% | |
| TCTACTTGAAGAGTTGAAGG+AGG | + | chr3.3:89850911-89850930 | MS.gene40342:intron | 40.0% | |
| TCTTTCATTCTTTCCTCCCA+AGG | - | chr3.3:89852428-89852447 | None:intergenic | 40.0% | |
| TGAAACAAGGGAGCAATAGA+AGG | + | chr3.3:89848372-89848391 | MS.gene40342:intron | 40.0% | |
| TGAAGGAGGAATTAAATGGG+AGG | + | chr3.3:89850925-89850944 | MS.gene40342:intron | 40.0% | |
| TGATCGAGTGGTTGAAACAA+GGG | + | chr3.3:89848360-89848379 | MS.gene40342:intron | 40.0% | |
| TGATCTACGAGACAAAGTGT+TGG | + | chr3.3:89848678-89848697 | MS.gene40342:intron | 40.0% | |
| TGGAAAAACCTAGGAGATAG+AGG | + | chr3.3:89850327-89850346 | MS.gene40342:intron | 40.0% | |
| TGGGCTAATCCTATTGCTAT+GGG | - | chr3.3:89850786-89850805 | None:intergenic | 40.0% | |
| TGGGGTTAATAAGGCTTCTT+TGG | + | chr3.3:89847042-89847061 | MS.gene40342:CDS | 40.0% | |
| TGGTAAGTAGATTGCTTCCA+TGG | - | chr3.3:89850545-89850564 | None:intergenic | 40.0% | |
| TGGTTGAAACAACTGCTTGA+TGG | - | chr3.3:89849751-89849770 | None:intergenic | 40.0% | |
| TGTTCTACGTGACAAAGTGT+TGG | + | chr3.3:89848523-89848542 | MS.gene40342:intron | 40.0% | |
| TTAGAAGTTGTTTGGCGAGT+TGG | - | chr3.3:89849873-89849892 | None:intergenic | 40.0% | |
| TTCAACCTGAGTGGTTGAAA+TGG | + | chr3.3:89848412-89848431 | MS.gene40342:intron | 40.0% | |
| TTGATCGAGTGGTTGAAACA+AGG | + | chr3.3:89848359-89848378 | MS.gene40342:intron | 40.0% | |
| TTGGGCTAATCCTATTGCTA+TGG | - | chr3.3:89850787-89850806 | None:intergenic | 40.0% | |
| TTTCTCTTTGGATAGAGGCA+AGG | - | chr3.3:89847017-89847036 | None:intergenic | 40.0% | |
| TTTGTCACGTAGAACATCGT+CGG | - | chr3.3:89848519-89848538 | None:intergenic | 40.0% | |
| ! | ACAACTGCTTGATGGGTAAA+AGG | - | chr3.3:89849743-89849762 | None:intergenic | 40.0% |
| ! | ACATCGTCGGTTGAATTCTA+TGG | - | chr3.3:89848506-89848525 | None:intergenic | 40.0% |
| ! | ACCTCTGAGAAGGATAAGTA+CGG | + | chr3.3:89847259-89847278 | MS.gene40342:CDS | 40.0% |
| ! | AGGATTTTGTGTTGGATGTG+TGG | + | chr3.3:89848746-89848765 | MS.gene40342:intron | 40.0% |
| ! | ATCCTATGTAGACTCTAGAG+TGG | + | chr3.3:89852628-89852647 | MS.gene40342:intron | 40.0% |
| ! | ATTAGGTTTTCCTCTACCTC+TGG | - | chr3.3:89848946-89848965 | None:intergenic | 40.0% |
| ! | CAATGTAGGTTGGAGAGATA+AGG | - | chr3.3:89849846-89849865 | None:intergenic | 40.0% |
| ! | CGGCATTTTCAGATTCTTGT+AGG | + | chr3.3:89852537-89852556 | MS.gene40342:intron | 40.0% |
| ! | CGTAACGCTTTTCTTCTCTA+GGG | - | chr3.3:89850672-89850691 | None:intergenic | 40.0% |
| ! | GAACCATGATGATGATGTGA+AGG | + | chr3.3:89847516-89847535 | MS.gene40342:CDS | 40.0% |
| ! | GAGATGTCCTATGTTTGTTG+GGG | + | chr3.3:89851374-89851393 | MS.gene40342:intron | 40.0% |
| ! | GAGTGGCTCGAAATATTTTG+TGG | + | chr3.3:89850642-89850661 | MS.gene40342:intron | 40.0% |
| ! | GATCTACGAGACAAAGTGTT+GGG | + | chr3.3:89848679-89848698 | MS.gene40342:intron | 40.0% |
| ! | GGGATCTTTGTATGTCACTT+CGG | - | chr3.3:89851785-89851804 | None:intergenic | 40.0% |
| ! | GGTGTTGAGTCACTTGAAAA+TGG | + | chr3.3:89849240-89849259 | MS.gene40342:intron | 40.0% |
| ! | GGTTGTTGTTGTTGATTGAG+TGG | + | chr3.3:89849089-89849108 | MS.gene40342:intron | 40.0% |
| ! | GTACGTTTTTCTCCCAATGA+TGG | - | chr3.3:89846926-89846945 | None:intergenic | 40.0% |
| ! | GTATGAGTTGAAAGCATAGG+AGG | - | chr3.3:89851549-89851568 | None:intergenic | 40.0% |
| ! | GTTCTACGTGACAAAGTGTT+GGG | + | chr3.3:89848524-89848543 | MS.gene40342:intron | 40.0% |
| ! | GTTGGAGAGATAAGGGTTTT+TGG | - | chr3.3:89849838-89849857 | None:intergenic | 40.0% |
| ! | GTTTTGCAACTTACAACGTC+AGG | - | chr3.3:89847679-89847698 | None:intergenic | 40.0% |
| ! | TCGTAACGCTTTTCTTCTCT+AGG | - | chr3.3:89850673-89850692 | None:intergenic | 40.0% |
| ! | TTTGGTCGTGTTAATGGGTA+AGG | + | chr3.3:89849219-89849238 | MS.gene40342:intron | 40.0% |
| !! | AACCACTCTAGAGTCTACAT+AGG | - | chr3.3:89852633-89852652 | None:intergenic | 40.0% |
| !! | ACAAGGAGTACTGATAAACG+AGG | - | chr3.3:89852674-89852693 | None:intergenic | 40.0% |
| !! | ACCACTCAGGTTGAATTCTA+TGG | - | chr3.3:89848407-89848426 | None:intergenic | 40.0% |
| !! | AGGTGAGTCATTTTGATGGA+TGG | + | chr3.3:89848909-89848928 | MS.gene40342:intron | 40.0% |
| !! | ATAGCAATAGGATTAGCCCA+AGG | + | chr3.3:89850786-89850805 | MS.gene40342:intron | 40.0% |
| !! | ATCTACGAGACAAAGTGTTG+GGG | + | chr3.3:89848680-89848699 | MS.gene40342:intron | 40.0% |
| !! | CGTAAGGTGAGTCATTTTGA+TGG | + | chr3.3:89848905-89848924 | MS.gene40342:intron | 40.0% |
| !! | GAAAGTAGCACTCAAGTTGA+AGG | + | chr3.3:89848616-89848635 | MS.gene40342:intron | 40.0% |
| !! | GGCTGTTTCTTGATGTCAAA+TGG | + | chr3.3:89853203-89853222 | MS.gene40342:CDS | 40.0% |
| !! | GGTGAGTCATTTTGATGGAT+GGG | + | chr3.3:89848910-89848929 | MS.gene40342:intron | 40.0% |
| !! | TACCTCTAGCCTTGGTTTAA+AGG | + | chr3.3:89846943-89846962 | MS.gene40342:CDS | 40.0% |
| !! | TCGCTTGTTAATTTGCCTGT+CGG | - | chr3.3:89847416-89847435 | None:intergenic | 40.0% |
| !!! | GAATCTGAAAATGCCGGTTT+TGG | - | chr3.3:89852533-89852552 | None:intergenic | 40.0% |
| !!! | TTTTAAGACATGTTGGGCAG+AGG | + | chr3.3:89850247-89850266 | MS.gene40342:intron | 40.0% |
| AACCTGAGTGGTTGAAATGG+AGG | + | chr3.3:89848415-89848434 | MS.gene40342:intron | 45.0% | |
| AAGGGAGCAATAGAAGGAGA+TGG | + | chr3.3:89848378-89848397 | MS.gene40342:intron | 45.0% | |
| ACAAATCAACAGGCGATTGG+GGG | + | chr3.3:89847228-89847247 | MS.gene40342:CDS | 45.0% | |
| ACATTCCTCTAGCGATGGTT+TGG | + | chr3.3:89847093-89847112 | MS.gene40342:CDS | 45.0% | |
| ACCATAGAATTCAACCTGGG+TGG | + | chr3.3:89848555-89848574 | MS.gene40342:intron | 45.0% | |
| ACCGTACTTATCCTTCTCAG+AGG | - | chr3.3:89847263-89847282 | None:intergenic | 45.0% | |
| ACGCGATATGTAAAGCTGCT+TGG | + | chr3.3:89849680-89849699 | MS.gene40342:intron | 45.0% | |
| AGAAGTTGTTTGGCGAGTTG+GGG | - | chr3.3:89849871-89849890 | None:intergenic | 45.0% | |
| AGTCAAATCACCAGAGGTAG+AGG | + | chr3.3:89848933-89848952 | MS.gene40342:intron | 45.0% | |
| AGTCACGGGAAGTAATGAAG+CGG | + | chr3.3:89846820-89846839 | MS.gene40342:CDS | 45.0% | |
| ATAGGCGGACGTGATATTGT+TGG | + | chr3.3:89847193-89847212 | MS.gene40342:CDS | 45.0% | |
| ATATATGCACCACCATGACG+GGG | - | chr3.3:89849430-89849449 | None:intergenic | 45.0% | |
| ATATGTGTGTGTGTGTGTGC+GGG | + | chr3.3:89849446-89849465 | MS.gene40342:intron | 45.0% | |
| CATATATGCACCACCATGAC+GGG | - | chr3.3:89849431-89849450 | None:intergenic | 45.0% | |
| CATTTCCAAACCATCGCTAG+AGG | - | chr3.3:89847101-89847120 | None:intergenic | 45.0% | |
| CGACAAATCAACAGGCGATT+GGG | + | chr3.3:89847226-89847245 | MS.gene40342:CDS | 45.0% | |
| CTACAACCTCTCCAAACTTG+GGG | + | chr3.3:89847614-89847633 | MS.gene40342:CDS | 45.0% | |
| CTACTTACCACAACACGTGA+TGG | + | chr3.3:89850555-89850574 | MS.gene40342:intron | 45.0% | |
| CTATCACATTCCTCTAGCGA+TGG | + | chr3.3:89847088-89847107 | MS.gene40342:CDS | 45.0% | |
| CTTGGCGGTCTTTCAAAACT+TGG | + | chr3.3:89846770-89846789 | MS.gene40342:CDS | 45.0% | |
| CTTTGTCATAGGATTGCGCA+GGG | + | chr3.3:89847887-89847906 | MS.gene40342:intron | 45.0% | |
| GAAAAACGTACCTCTAGCCT+TGG | + | chr3.3:89846935-89846954 | MS.gene40342:CDS | 45.0% | |
| GACAAATCAACAGGCGATTG+GGG | + | chr3.3:89847227-89847246 | MS.gene40342:CDS | 45.0% | |
| GACTAGAATATGCGGTCTTC+TGG | - | chr3.3:89852996-89853015 | None:intergenic | 45.0% | |
| GCAACCCTAACTCTCTAATG+TGG | - | chr3.3:89848802-89848821 | None:intergenic | 45.0% | |
| GGAGGAATTAAATGGGAGGT+TGG | + | chr3.3:89850929-89850948 | MS.gene40342:intron | 45.0% | |
| GGCATAGACAGTAGACTTTC+TGG | - | chr3.3:89851970-89851989 | None:intergenic | 45.0% | |
| GGGATTTGACTGTAATCCCT+TGG | - | chr3.3:89849312-89849331 | None:intergenic | 45.0% | |
| GTCCTTTAAACCAAGGCTAG+AGG | - | chr3.3:89846948-89846967 | None:intergenic | 45.0% | |
| GTCTACAACCTCTCCAAACT+TGG | + | chr3.3:89847612-89847631 | MS.gene40342:CDS | 45.0% | |
| TAGGCGGACGTGATATTGTT+GGG | + | chr3.3:89847194-89847213 | MS.gene40342:CDS | 45.0% | |
| TATCTTAACACTCCCCGTCA+TGG | + | chr3.3:89849415-89849434 | MS.gene40342:intron | 45.0% | |
| TCGACAAATCAACAGGCGAT+TGG | + | chr3.3:89847225-89847244 | MS.gene40342:CDS | 45.0% | |
| TCTCCGATCGACAAATCAAC+AGG | + | chr3.3:89847218-89847237 | MS.gene40342:CDS | 45.0% | |
| TGCAGTGTCTAACCAGAATG+AGG | - | chr3.3:89853018-89853037 | None:intergenic | 45.0% | |
| TTCAACCTGGGTGGTTGAAA+TGG | + | chr3.3:89848564-89848583 | MS.gene40342:intron | 45.0% | |
| TTGCAATGCCTCTATCTCCT+AGG | - | chr3.3:89850338-89850357 | None:intergenic | 45.0% | |
| ! | ACAAGTTGGCGTGAAAGTCA+CGG | + | chr3.3:89846805-89846824 | MS.gene40342:CDS | 45.0% |
| ! | ACCACCCAGGTTGAATTCTA+TGG | - | chr3.3:89848559-89848578 | None:intergenic | 45.0% |
| ! | AGCGATGGTTTGGAAATGGT+AGG | + | chr3.3:89847103-89847122 | MS.gene40342:CDS | 45.0% |
| ! | ATAGAGGCAAGGTCTTGTCA+CGG | - | chr3.3:89847006-89847025 | None:intergenic | 45.0% |
| ! | CTCTAGCGATGGTTTGGAAA+TGG | + | chr3.3:89847099-89847118 | MS.gene40342:CDS | 45.0% |
| ! | TATGAATAGCACGCATCGAC+AGG | - | chr3.3:89851226-89851245 | None:intergenic | 45.0% |
| ! | TTGGAGAAGGCATATGAGAG+TGG | + | chr3.3:89850625-89850644 | MS.gene40342:intron | 45.0% |
| ! | TTTACGTTTTCAGCCTTGGG+AGG | + | chr3.3:89852412-89852431 | MS.gene40342:intron | 45.0% |
| !! | AAGGAGAGAATGGTGATGGT+TGG | + | chr3.3:89851824-89851843 | MS.gene40342:intron | 45.0% |
| !! | GTGTTGGTTCCTGAACAGAT+TGG | + | chr3.3:89851157-89851176 | MS.gene40342:intron | 45.0% |
| !! | TCGCCTGTTGATTTGTCGAT+CGG | - | chr3.3:89847224-89847243 | None:intergenic | 45.0% |
| !! | TCTACGAGACAAAGTGTTGG+GGG | + | chr3.3:89848681-89848700 | MS.gene40342:intron | 45.0% |
| AACCTGGGTGGTTGAAATGG+AGG | + | chr3.3:89848567-89848586 | MS.gene40342:intron | 50.0% | |
| AATGGAAGGGACGTCGATGA+TGG | + | chr3.3:89847316-89847335 | MS.gene40342:CDS | 50.0% | |
| ACCAAATTGCTAGAGGCCTG+AGG | - | chr3.3:89849534-89849553 | None:intergenic | 50.0% | |
| AGGCGGACGTGATATTGTTG+GGG | + | chr3.3:89847195-89847214 | MS.gene40342:CDS | 50.0% | |
| AGGGAGTCTCAACTTGTGTG+AGG | + | chr3.3:89850726-89850745 | MS.gene40342:intron | 50.0% | |
| AGGGCTTAGGGTTTGAACCT+TGG | - | chr3.3:89850806-89850825 | None:intergenic | 50.0% | |
| AGTGCTATCACCGAGATGCA+TGG | + | chr3.3:89850869-89850888 | MS.gene40342:intron | 50.0% | |
| AGTTGGGGAGCAATGTAGGT+TGG | - | chr3.3:89849856-89849875 | None:intergenic | 50.0% | |
| ATGTAGTCGACCCCACTTAG+TGG | + | chr3.3:89849056-89849075 | MS.gene40342:intron | 50.0% | |
| CAAAGCAAATGCGGGATGAG+TGG | + | chr3.3:89850391-89850410 | MS.gene40342:intron | 50.0% | |
| CAAGCGATTGGAGGAGAGAA+AGG | + | chr3.3:89847429-89847448 | MS.gene40342:CDS | 50.0% | |
| CTCAACTTGTGTGAGGAGTG+AGG | + | chr3.3:89850733-89850752 | MS.gene40342:intron | 50.0% | |
| CTCCTCCATTTCAACCACTC+AGG | - | chr3.3:89848420-89848439 | None:intergenic | 50.0% | |
| GATGGGAGTCAAATCACCAG+AGG | + | chr3.3:89848927-89848946 | MS.gene40342:intron | 50.0% | |
| GCGAAGGCCATACGTTTCTA+AGG | - | chr3.3:89850962-89850981 | None:intergenic | 50.0% | |
| GCGGACCAAGCACATAAAGA+TGG | - | chr3.3:89849641-89849660 | None:intergenic | 50.0% | |
| GCTTTGTCATAGGATTGCGC+AGG | + | chr3.3:89847886-89847905 | MS.gene40342:intron | 50.0% | |
| GGGCTTAGGGTTTGAACCTT+GGG | - | chr3.3:89850805-89850824 | None:intergenic | 50.0% | |
| TCCTCAGGCCTCTAGCAATT+TGG | + | chr3.3:89849530-89849549 | MS.gene40342:intron | 50.0% | |
| TCTTGCTTGTGCCCCAAGTT+TGG | - | chr3.3:89847628-89847647 | None:intergenic | 50.0% | |
| TGAGGAGTGAGGACACATGA+TGG | + | chr3.3:89850744-89850763 | MS.gene40342:intron | 50.0% | |
| TGCATCTCGGTGATAGCACT+TGG | - | chr3.3:89850869-89850888 | None:intergenic | 50.0% | |
| TGTAGTCGACCCCACTTAGT+GGG | + | chr3.3:89849057-89849076 | MS.gene40342:intron | 50.0% | |
| ! | CAAGTTGGCGTGAAAGTCAC+GGG | + | chr3.3:89846806-89846825 | MS.gene40342:CDS | 50.0% |
| ! | CGTGATGGAGCGGTATAAGA+TGG | + | chr3.3:89850570-89850589 | MS.gene40342:intron | 50.0% |
| ! | TACCACAACACGTGATGGAG+CGG | + | chr3.3:89850560-89850579 | MS.gene40342:intron | 50.0% |
| ! | TAGAGGCAAGGTCTTGTCAC+GGG | - | chr3.3:89847005-89847024 | None:intergenic | 50.0% |
| !! | CTACGAGACAAAGTGTTGGG+GGG | + | chr3.3:89848682-89848701 | MS.gene40342:intron | 50.0% |
| !! | CTACGTGACAAAGTGTTGGG+TGG | + | chr3.3:89848527-89848546 | MS.gene40342:intron | 50.0% |
| AATCAACAGGCGATTGGGGG+AGG | + | chr3.3:89847231-89847250 | MS.gene40342:CDS | 55.0% | |
| AGCAAATGCGGGATGAGTGG+AGG | + | chr3.3:89850394-89850413 | MS.gene40342:intron | 55.0% | |
| ATCAACAGGCGATTGGGGGA+GGG | + | chr3.3:89847232-89847251 | MS.gene40342:CDS | 55.0% | |
| CACGGGAAGTAATGAAGCGG+TGG | + | chr3.3:89846823-89846842 | MS.gene40342:CDS | 55.0% | |
| CTCCTCCATTTCAACCACCC+AGG | - | chr3.3:89848572-89848591 | None:intergenic | 55.0% | |
| CTTAACACTCCCCGTCATGG+TGG | + | chr3.3:89849418-89849437 | MS.gene40342:intron | 55.0% | |
| CTTGTGCCCCAAGTTTGGAG+AGG | - | chr3.3:89847623-89847642 | None:intergenic | 55.0% | |
| TACCGCTCCATCACGTGTTG+TGG | - | chr3.3:89850565-89850584 | None:intergenic | 55.0% | |
| TATGCTTGCGAGGTCGACCA+TGG | + | chr3.3:89850525-89850544 | MS.gene40342:intron | 55.0% | |
| ! | CGTCGATGATGGTGACGTGA+AGG | + | chr3.3:89847327-89847346 | MS.gene40342:CDS | 55.0% |
| ! | CTGGTGACAAGTTGGCCGAC+AGG | + | chr3.3:89847398-89847417 | MS.gene40342:CDS | 60.0% |
| ! | GGAGGGCAACACCTCTGAGA+AGG | + | chr3.3:89847249-89847268 | MS.gene40342:CDS | 60.0% |
| ! | GGCGAGTTGGGGAGCAATGT+AGG | - | chr3.3:89849860-89849879 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89846683 | 89853228 | 89846683 | ID=MS.gene40342 |
| chr3.3 | mRNA | 89846683 | 89853228 | 89846683 | ID=MS.gene40342.t1;Parent=MS.gene40342 |
| chr3.3 | exon | 89846683 | 89847684 | 89846683 | ID=MS.gene40342.t1.exon1;Parent=MS.gene40342.t1 |
| chr3.3 | CDS | 89846683 | 89847684 | 89846683 | ID=cds.MS.gene40342.t1;Parent=MS.gene40342.t1 |
| chr3.3 | exon | 89852224 | 89852250 | 89852224 | ID=MS.gene40342.t1.exon2;Parent=MS.gene40342.t1 |
| chr3.3 | CDS | 89852224 | 89852250 | 89852224 | ID=cds.MS.gene40342.t1;Parent=MS.gene40342.t1 |
| chr3.3 | exon | 89852425 | 89852517 | 89852425 | ID=MS.gene40342.t1.exon3;Parent=MS.gene40342.t1 |
| chr3.3 | CDS | 89852425 | 89852517 | 89852425 | ID=cds.MS.gene40342.t1;Parent=MS.gene40342.t1 |
| chr3.3 | exon | 89852946 | 89853024 | 89852946 | ID=MS.gene40342.t1.exon4;Parent=MS.gene40342.t1 |
| chr3.3 | CDS | 89852946 | 89853024 | 89852946 | ID=cds.MS.gene40342.t1;Parent=MS.gene40342.t1 |
| chr3.3 | exon | 89853138 | 89853228 | 89853138 | ID=MS.gene40342.t1.exon5;Parent=MS.gene40342.t1 |
| chr3.3 | CDS | 89853138 | 89853228 | 89853138 | ID=cds.MS.gene40342.t1;Parent=MS.gene40342.t1 |
| Gene Sequence |
| Protein sequence |
