Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054658.t1 | XP_003614041.2 | 74.9 | 211 | 13 | 2 | 1 | 202 | 187 | 366 | 4.80E-75 | 290.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054658.t1 | Q99MB4 | 27.8 | 205 | 101 | 6 | 1 | 192 | 197 | 367 | 3.5e-13 | 76.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054658.t1 | G7JWS4 | 74.9 | 211 | 13 | 2 | 1 | 202 | 187 | 366 | 3.5e-75 | 290.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene054658 | 0.817555 | 3.10E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene054658 | 0.821918 | 3.13E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene054658 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene054658 | 0.80947 | 1.86E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene054658 | -0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene050815 | MS.gene054658 | 0.805311 | 1.42E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene054658 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene054658 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene054658 | 0.828402 | 9.17E-55 | -1.69E-46 |
| MS.gene052426 | MS.gene054658 | 0.802538 | 5.35E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene054658 | 0.811927 | 5.48E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene054658 | 0.82414 | 9.48E-54 | -1.69E-46 |
| MS.gene054657 | MS.gene054658 | 0.862637 | 4.40E-64 | -1.69E-46 |
| MS.gene054658 | MS.gene05510 | 0.826251 | 3.01E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene05517 | 0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene055623 | 0.803901 | 2.79E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene055701 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene055818 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene056506 | 0.818958 | 1.49E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene056552 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene057693 | 0.817822 | 2.70E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene058146 | 0.810918 | 9.08E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene058595 | 0.828991 | 6.61E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene058979 | 0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene059249 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene059382 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene059830 | 0.821591 | 3.72E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene059842 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene060572 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene060586 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene060683 | 0.812099 | 5.03E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene060685 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene060802 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene060803 | 0.837001 | 6.72E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene062564 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene062672 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene063025 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene06303 | 0.818616 | 1.79E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene064070 | 0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene064353 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene064937 | 0.839743 | 1.32E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene065825 | 0.810723 | 1.00E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene066194 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene066264 | 0.822704 | 2.05E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene066319 | 0.820521 | 6.57E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene066320 | 0.840577 | 7.99E-58 | -1.69E-46 |
| MS.gene054658 | MS.gene066321 | 0.827614 | 1.42E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene066745 | 0.812164 | 4.87E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene066836 | 0.812057 | 5.13E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene067173 | 0.816223 | 6.18E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene067982 | 0.821836 | 3.27E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene068526 | 0.821296 | 4.35E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene068529 | 0.81997 | 8.78E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene068777 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene069206 | 0.822636 | 2.13E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene070553 | 0.812204 | 4.77E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene07084 | 0.818317 | 2.09E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene071480 | 0.825798 | 3.85E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene071481 | 0.804338 | 2.27E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene072023 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene072098 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene072677 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene073008 | 0.820887 | 5.41E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene073064 | 0.807587 | 4.70E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene07344 | 0.845134 | 4.91E-59 | -1.69E-46 |
| MS.gene054658 | MS.gene073460 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene073853 | 0.818417 | 1.98E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene073954 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene074026 | 0.805654 | 1.20E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene07733 | 0.805482 | 1.31E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene07798 | 0.806324 | 8.69E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene07882 | 0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene08782 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene08853 | 0.80478 | 1.83E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene09952 | 0.830096 | 3.56E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene20184 | 0.828676 | 7.88E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene20635 | 0.803276 | 3.77E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene21149 | 0.82224 | 2.63E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene21200 | 0.811073 | 8.40E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene21700 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene21881 | 0.806878 | 6.64E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene21886 | 0.801321 | 9.51E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene21911 | 0.828163 | 1.05E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene21926 | 0.806275 | 8.90E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene21927 | 0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene21928 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene22091 | 0.8266 | 2.48E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene22270 | 0.817002 | 4.13E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene22271 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene22820 | -0.812713 | 3.69E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene23528 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene23546 | 0.800168 | 1.64E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene24067 | 0.823638 | 1.24E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene24608 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene26288 | 0.814455 | 1.53E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene28498 | 0.816373 | 5.72E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene28514 | 0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene28606 | 0.806579 | 7.68E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene28658 | 0.810221 | 1.28E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene28709 | 0.801119 | 1.05E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene28944 | 0.810688 | 1.02E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene29000 | 0.821164 | 4.67E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene29773 | 0.837216 | 5.92E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene30356 | 0.801821 | 7.51E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene31876 | 0.80049 | 1.41E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene32556 | 0.807934 | 3.97E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene33468 | 0.812773 | 3.58E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene35121 | 0.801303 | 9.59E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene35408 | 0.810317 | 1.22E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene37725 | 0.802994 | 4.31E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene39572 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene39846 | 0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene40342 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene40860 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene41121 | 0.810598 | 1.06E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene41434 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene41679 | 0.806559 | 7.76E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene41838 | 0.803911 | 2.78E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene42125 | 0.825964 | 3.52E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene44986 | 0.803276 | 3.77E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene45405 | 0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene45567 | 0.825778 | 3.89E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene45933 | 0.808227 | 3.44E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene46128 | 0.803322 | 3.68E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene47283 | 0.803674 | 3.11E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene47338 | 0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene47339 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene47340 | 0.805626 | 1.22E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene47531 | 0.82597 | 3.51E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene48988 | 0.803685 | 3.10E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene49486 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene49839 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene49940 | 0.838559 | 2.68E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene50708 | 0.808118 | 3.62E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene52448 | 0.816497 | 5.36E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene53182 | 0.808866 | 2.51E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene53579 | 0.840154 | 1.03E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene54544 | 0.801796 | 7.60E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene55396 | 0.863615 | 2.19E-64 | -1.69E-46 |
| MS.gene054658 | MS.gene55397 | 0.828765 | 7.50E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene55539 | 0.809132 | 2.20E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene55625 | 0.81137 | 7.24E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene56227 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene56537 | 0.811206 | 7.86E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene57469 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene58503 | 0.8145 | 1.49E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene59948 | 0.824943 | 6.14E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene59949 | 0.842543 | 2.43E-58 | -1.69E-46 |
| MS.gene054658 | MS.gene60631 | 0.812253 | 4.65E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene60903 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene61435 | 0.812987 | 3.22E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene62214 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene62393 | 0.836719 | 7.94E-57 | -1.69E-46 |
| MS.gene054658 | MS.gene62558 | 0.804069 | 2.58E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene63058 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene64243 | 0.835072 | 2.08E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene64417 | 0.832351 | 9.94E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene64981 | 0.809871 | 1.53E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene65221 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene65650 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene65895 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene66676 | 0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene67346 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene67662 | 0.816354 | 5.77E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene68873 | 0.800654 | 1.30E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene69477 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene69600 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene69867 | 0.813538 | 2.43E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene70895 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene054658 | MS.gene71871 | 0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene72203 | 0.805363 | 1.38E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene73640 | 0.813513 | 2.46E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene73820 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene74444 | 0.817123 | 3.88E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene74971 | 0.824956 | 6.09E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene75605 | 0.818484 | 1.91E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene78234 | 0.818991 | 1.47E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene78247 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene78478 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene78492 | 0.832612 | 8.56E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene78682 | 0.859124 | 5.14E-63 | -1.69E-46 |
| MS.gene054658 | MS.gene78951 | 0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene80919 | 0.805733 | 1.16E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene81653 | 0.822234 | 2.64E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene81998 | 0.82346 | 1.37E-53 | -1.69E-46 |
| MS.gene054658 | MS.gene82805 | 0.810033 | 1.41E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene82879 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene82956 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene83407 | 0.811363 | 7.27E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene84388 | 0.817445 | 3.29E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene85277 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene85663 | 0.811766 | 5.94E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene86844 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene88243 | 0.802286 | 6.03E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene90525 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene91907 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene92188 | 0.816157 | 6.39E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene92590 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene93041 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene054658 | MS.gene95625 | 0.808818 | 2.57E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene96791 | 0.808459 | 3.07E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene98543 | 0.830381 | 3.03E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054658.t1 | MTR_5g044050 | 74.882 | 211 | 13 | 2 | 1 | 202 | 187 | 366 | 1.53e-100 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054658.t1 | AT1G26520 | 51.456 | 206 | 57 | 4 | 1 | 197 | 199 | 370 | 7.78e-60 | 191 |
Find 38 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACGAGTGTGTTAATGTTA+TGG | 0.302882 | 5.3:-31895154 | None:intergenic |
| AGTTCAAAGAGTCTATTTAT+AGG | 0.307618 | 5.3:+31896560 | MS.gene054658:CDS |
| TGATGAATTGCATACTTTGC+AGG | 0.313404 | 5.3:+31895812 | MS.gene054658:CDS |
| TATGGCTAGAGGAGATTCTT+TGG | 0.317773 | 5.3:+31895730 | MS.gene054658:CDS |
| ATGAATAAGATAGTATTTAT+AGG | 0.327529 | 5.3:+31898413 | MS.gene054658:CDS |
| AATTCTTAACAAGGTTGATT+TGG | 0.330079 | 5.3:+31895085 | MS.gene054658:CDS |
| TTGGGAGAAGAAATATGATA+TGG | 0.330619 | 5.3:+31895749 | MS.gene054658:CDS |
| GAGCTTTCAAGCCATTGATT+AGG | 0.361287 | 5.3:-31898539 | None:intergenic |
| AAACAAATACACAGCCTAAC+AGG | 0.375928 | 5.3:-31898568 | None:intergenic |
| AATCATGGCAGACTCGTATA+TGG | 0.391984 | 5.3:+31895712 | MS.gene054658:intron |
| CTGGCACCTGCCAGTCATCT+AGG | 0.423280 | 5.3:-31896630 | None:intergenic |
| TTGGTATCTGCAGAAGGCTC+TGG | 0.429405 | 5.3:+31895104 | MS.gene054658:CDS |
| ATGGCTAGAGGAGATTCTTT+GGG | 0.440901 | 5.3:+31895731 | MS.gene054658:CDS |
| TCCTGTCTCGGAGATGCATA+TGG | 0.443042 | 5.3:-31895416 | None:intergenic |
| AGTGGAAGAAAGAAGAAAAC+AGG | 0.446364 | 5.3:+31898390 | MS.gene054658:CDS |
| AGGAATAAGCTAACTGCCTC+TGG | 0.459959 | 5.3:+31896580 | MS.gene054658:CDS |
| GAAAGCTCTTGCAACCTGTT+AGG | 0.464002 | 5.3:+31898554 | MS.gene054658:CDS |
| AAAGAAGATGTCCTAATCAA+TGG | 0.473604 | 5.3:+31898528 | MS.gene054658:CDS |
| TCTTTCTTCCACTTCCGAGC+AGG | 0.475644 | 5.3:-31898380 | None:intergenic |
| AGATCGTTCCTGCTCGGAAG+TGG | 0.476913 | 5.3:+31898372 | MS.gene054658:CDS |
| ACCATATGCATCTCCGAGAC+AGG | 0.504951 | 5.3:+31895415 | MS.gene054658:CDS |
| AAGATCAACTGTTCCTGTCT+CGG | 0.509787 | 5.3:-31895428 | None:intergenic |
| ATAAGCTAACTGCCTCTGGC+TGG | 0.532986 | 5.3:+31896584 | MS.gene054658:CDS |
| AGGAACAGTTGATCTTGATA+AGG | 0.543424 | 5.3:+31895435 | MS.gene054658:CDS |
| GTCAGCAACTCCTAGATGAC+TGG | 0.548785 | 5.3:+31896620 | MS.gene054658:CDS |
| GCAACTCCTAGATGACTGGC+AGG | 0.579480 | 5.3:+31896624 | MS.gene054658:CDS |
| AGAAGGCTCTGGAGCTCTAG+AGG | 0.581340 | 5.3:+31895115 | MS.gene054658:CDS |
| GTTGATTTGGTATCTGCAGA+AGG | 0.585096 | 5.3:+31895098 | MS.gene054658:CDS |
| GGACATTGTAATTCTTAACA+AGG | 0.607377 | 5.3:+31895076 | None:intergenic |
| TATATGAGATCGTTCCTGCT+CGG | 0.607859 | 5.3:+31898366 | MS.gene054658:CDS |
| ATGGATGTATACCGTTGCAA+AGG | 0.617207 | 5.3:+31895768 | MS.gene054658:CDS |
| CTGCAGTATCGTAAGCGTGG+CGG | 0.624449 | 5.3:-31895226 | None:intergenic |
| GACACGTGTCAGCCAGCCAG+AGG | 0.628597 | 5.3:-31896596 | None:intergenic |
| CATTCAAGACTCCTTTGCAA+CGG | 0.633864 | 5.3:-31895779 | None:intergenic |
| GCAGACTCGTATATGGCTAG+AGG | 0.641181 | 5.3:+31895719 | MS.gene054658:intron |
| AGCTCTAGAGGAACTCGAGG+AGG | 0.659807 | 5.3:+31895127 | MS.gene054658:CDS |
| TTACTGCAGTATCGTAAGCG+TGG | 0.673945 | 5.3:-31895229 | None:intergenic |
| TGGAGCTCTAGAGGAACTCG+AGG | 0.681621 | 5.3:+31895124 | MS.gene054658:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATTAAAGTAAAATG+TGG | - | chr5.3:31896104-31896123 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAACAGAATTTTA+AGG | - | chr5.3:31897445-31897464 | None:intergenic | 10.0% |
| !!! | TATATATGTTGATTTTAATT+AGG | + | chr5.3:31896741-31896760 | MS.gene054658:intron | 10.0% |
| !!! | TTAACTTATATATTTTGAAA+AGG | + | chr5.3:31897950-31897969 | MS.gene054658:intron | 10.0% |
| !!! | TTACTTTAATTTATAATGAT+GGG | + | chr5.3:31896108-31896127 | MS.gene054658:intron | 10.0% |
| !!! | TTTACTTTAATTTATAATGA+TGG | + | chr5.3:31896107-31896126 | MS.gene054658:intron | 10.0% |
| !! | ATCAAAACTCAAATATTATA+TGG | - | chr5.3:31898301-31898320 | None:intergenic | 15.0% |
| !! | ATGAATAAGATAGTATTTAT+AGG | + | chr5.3:31898413-31898432 | MS.gene054658:CDS | 15.0% |
| !! | ATGAGATGTTTATAAAATAT+TGG | + | chr5.3:31897216-31897235 | MS.gene054658:intron | 15.0% |
| !! | TAAATACTATCTTAGAATTT+GGG | - | chr5.3:31897488-31897507 | None:intergenic | 15.0% |
| !! | TAAATCATTTGATTGATATT+TGG | + | chr5.3:31898025-31898044 | MS.gene054658:intron | 15.0% |
| !! | TTAGATAAATTAGACATTAT+GGG | + | chr5.3:31897884-31897903 | MS.gene054658:intron | 15.0% |
| !! | TTTAGATAAATTAGACATTA+TGG | + | chr5.3:31897883-31897902 | MS.gene054658:intron | 15.0% |
| !!! | AATTAATTCATTTGTTGTTT+GGG | + | chr5.3:31896433-31896452 | MS.gene054658:intron | 15.0% |
| !!! | ATGTTTATTTTTTGATTAAC+AGG | + | chr5.3:31898495-31898514 | MS.gene054658:intron | 15.0% |
| !! | AAAAGTAATTAATAGTGCAT+TGG | - | chr5.3:31896034-31896053 | None:intergenic | 20.0% |
| !! | AAAATAACCTTGTTAACTAT+TGG | - | chr5.3:31896141-31896160 | None:intergenic | 20.0% |
| !! | AAACTCAAATATTATATGGA+AGG | - | chr5.3:31898297-31898316 | None:intergenic | 20.0% |
| !! | AAATACTATCTTAGAATTTG+GGG | - | chr5.3:31897487-31897506 | None:intergenic | 20.0% |
| !! | AACTCAAATATTATATGGAA+GGG | - | chr5.3:31898296-31898315 | None:intergenic | 20.0% |
| !! | ATGTTTATAAAATATTGGCA+TGG | + | chr5.3:31897221-31897240 | MS.gene054658:intron | 20.0% |
| !! | ATTTAATCTTGTGGTTTATT+TGG | + | chr5.3:31897908-31897927 | MS.gene054658:intron | 20.0% |
| !! | ATTTATTTCACTATTATCGT+CGG | - | chr5.3:31898083-31898102 | None:intergenic | 20.0% |
| !! | CCTGAAAAACATTTATAAAT+CGG | + | chr5.3:31897407-31897426 | MS.gene054658:intron | 20.0% |
| !! | CTAAATACTATCTTAGAATT+TGG | - | chr5.3:31897489-31897508 | None:intergenic | 20.0% |
| !! | TTTACATCATGTTTAAATCA+TGG | + | chr5.3:31895697-31895716 | MS.gene054658:intron | 20.0% |
| !!! | AAGATTCTAAAGTTACTAAA+TGG | - | chr5.3:31897831-31897850 | None:intergenic | 20.0% |
| !!! | CAATTAATTCATTTGTTGTT+TGG | + | chr5.3:31896432-31896451 | MS.gene054658:intron | 20.0% |
| !!! | TAATAATTAAGGGTACTATT+GGG | - | chr5.3:31896058-31896077 | None:intergenic | 20.0% |
| !!! | TGTCTAATTTATCTAAAACT+TGG | - | chr5.3:31897880-31897899 | None:intergenic | 20.0% |
| !!! | TTAATTAGGTATTGTATAAG+AGG | + | chr5.3:31896755-31896774 | MS.gene054658:intron | 20.0% |
| !!! | TTTGTTTTGAGAGTTTATAT+TGG | + | chr5.3:31897371-31897390 | MS.gene054658:intron | 20.0% |
| ! | ACTATCTATTCTTACACATA+TGG | - | chr5.3:31897342-31897361 | None:intergenic | 25.0% |
| ! | ACTCAAATATTATATGGAAG+GGG | - | chr5.3:31898295-31898314 | None:intergenic | 25.0% |
| ! | AGTATTTAGACCTTAGTTAT+AGG | + | chr5.3:31897500-31897519 | MS.gene054658:intron | 25.0% |
| ! | AGTATTTATAGGTAACATGA+CGG | + | chr5.3:31898424-31898443 | MS.gene054658:intron | 25.0% |
| ! | AGTCTTCATTAGATGTAATA+TGG | + | chr5.3:31897579-31897598 | MS.gene054658:intron | 25.0% |
| ! | AGTGTGCATAGTAATAATTA+AGG | - | chr5.3:31896069-31896088 | None:intergenic | 25.0% |
| ! | AGTTCAAAGAGTCTATTTAT+AGG | + | chr5.3:31896560-31896579 | MS.gene054658:CDS | 25.0% |
| ! | ATGCTTCAAATGTAAAATCT+TGG | + | chr5.3:31897535-31897554 | MS.gene054658:intron | 25.0% |
| ! | ATTATGGGTATTTAATCTTG+TGG | + | chr5.3:31897899-31897918 | MS.gene054658:intron | 25.0% |
| ! | GAAAAACATTTATAAATCGG+AGG | + | chr5.3:31897410-31897429 | MS.gene054658:intron | 25.0% |
| ! | GTATTTAGACCTTAGTTATA+GGG | + | chr5.3:31897501-31897520 | MS.gene054658:intron | 25.0% |
| ! | GTGTGCATAGTAATAATTAA+GGG | - | chr5.3:31896068-31896087 | None:intergenic | 25.0% |
| ! | TAAAGTAAAATGTGGTACTT+TGG | - | chr5.3:31896096-31896115 | None:intergenic | 25.0% |
| ! | TCTTTAATTAGAGATGAATC+TGG | - | chr5.3:31896838-31896857 | None:intergenic | 25.0% |
| ! | TGCTTCAAATGTAAAATCTT+GGG | + | chr5.3:31897536-31897555 | MS.gene054658:intron | 25.0% |
| ! | TTTATAAAATATTGGCATGG+TGG | + | chr5.3:31897224-31897243 | MS.gene054658:intron | 25.0% |
| !! | AATTCTTAACAAGGTTGATT+TGG | + | chr5.3:31895085-31895104 | MS.gene054658:CDS | 25.0% |
| !! | AGTTAGATGAAGTATCAATT+AGG | + | chr5.3:31897999-31898018 | MS.gene054658:intron | 25.0% |
| !! | CCGATTTATAAATGTTTTTC+AGG | - | chr5.3:31897410-31897429 | None:intergenic | 25.0% |
| !! | CTAGTAACACTTTAAAAATC+TGG | + | chr5.3:31897695-31897714 | MS.gene054658:intron | 25.0% |
| !! | GAGAAACAAGGTAATTTTTA+TGG | + | chr5.3:31896879-31896898 | MS.gene054658:intron | 25.0% |
| !! | TAACACTTTAAAAATCTGGT+TGG | + | chr5.3:31897699-31897718 | MS.gene054658:intron | 25.0% |
| !!! | AAAAACAGAATTTTAAGGCA+AGG | - | chr5.3:31897440-31897459 | None:intergenic | 25.0% |
| !!! | AAAACAGAATTTTAAGGCAA+GGG | - | chr5.3:31897439-31897458 | None:intergenic | 25.0% |
| !!! | GTAATAATTAAGGGTACTAT+TGG | - | chr5.3:31896059-31896078 | None:intergenic | 25.0% |
| !!! | TCTTTTTAAAACAGTAACAG+TGG | - | chr5.3:31896283-31896302 | None:intergenic | 25.0% |
| AAAGAAGATGTCCTAATCAA+TGG | + | chr5.3:31898528-31898547 | MS.gene054658:CDS | 30.0% | |
| AAATGCACCAATAGTTAACA+AGG | + | chr5.3:31896131-31896150 | MS.gene054658:intron | 30.0% | |
| AAATGTAAAATCTTGGGTGT+GGG | + | chr5.3:31897542-31897561 | MS.gene054658:intron | 30.0% | |
| AAATTACAAACCCTTATACG+AGG | - | chr5.3:31897125-31897144 | None:intergenic | 30.0% | |
| AACAAATATATCAGACGAAG+AGG | - | chr5.3:31897782-31897801 | None:intergenic | 30.0% | |
| AATTAAGTTTGCATTCGCAT+TGG | + | chr5.3:31896255-31896274 | MS.gene054658:intron | 30.0% | |
| ACAAATATATCAGACGAAGA+GGG | - | chr5.3:31897781-31897800 | None:intergenic | 30.0% | |
| AGTAGAGTAACAATTGAGTT+TGG | + | chr5.3:31897651-31897670 | MS.gene054658:intron | 30.0% | |
| AGTATGCTAAAAGAGAAACA+AGG | + | chr5.3:31896867-31896886 | MS.gene054658:intron | 30.0% | |
| AGTTATAACAGAGAAGCTAA+AGG | - | chr5.3:31896496-31896515 | None:intergenic | 30.0% | |
| ATCAAACCTAAAACCGAAAT+TGG | - | chr5.3:31898157-31898176 | None:intergenic | 30.0% | |
| ATTTAGTCAAAAAGATCCCT+TGG | + | chr5.3:31896906-31896925 | MS.gene054658:intron | 30.0% | |
| CTAAAAAGCTTCAATGATAG+TGG | + | chr5.3:31895385-31895404 | MS.gene054658:CDS | 30.0% | |
| CTCAAATATTATATGGAAGG+GGG | - | chr5.3:31898294-31898313 | None:intergenic | 30.0% | |
| GCTTAAAAGAGAAACAAAAC+AGG | - | chr5.3:31895317-31895336 | None:intergenic | 30.0% | |
| GTATGGATGTAATGTCTTAT+AGG | - | chr5.3:31896320-31896339 | None:intergenic | 30.0% | |
| GTATTTATAGGTAACATGAC+GGG | + | chr5.3:31898425-31898444 | MS.gene054658:intron | 30.0% | |
| GTTGTAGAATCTACAATCTA+GGG | - | chr5.3:31896413-31896432 | None:intergenic | 30.0% | |
| TCAACTCTATTGCTAATTTC+TGG | + | chr5.3:31896782-31896801 | MS.gene054658:intron | 30.0% | |
| TGTTGTAGAATCTACAATCT+AGG | - | chr5.3:31896414-31896433 | None:intergenic | 30.0% | |
| TTCGAAGTTTCAGTAAATGT+AGG | + | chr5.3:31897159-31897178 | MS.gene054658:intron | 30.0% | |
| TTGGGAGAAGAAATATGATA+TGG | + | chr5.3:31895749-31895768 | MS.gene054658:CDS | 30.0% | |
| TTTAAAAATCTGGTTGGACA+TGG | + | chr5.3:31897705-31897724 | MS.gene054658:intron | 30.0% | |
| TTTGGCAAAACAAAATCTTG+TGG | + | chr5.3:31897926-31897945 | MS.gene054658:intron | 30.0% | |
| ! | AATTTTACATGCATAACCAC+TGG | - | chr5.3:31895926-31895945 | None:intergenic | 30.0% |
| ! | TTACTAGCTCTTGGAATTTA+GGG | - | chr5.3:31897682-31897701 | None:intergenic | 30.0% |
| ! | TTTAAAGTGTTACTAGCTCT+TGG | - | chr5.3:31897691-31897710 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr5.3:31896223-31896242 | MS.gene054658:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr5.3:31896242-31896223 | None:intergenic | 30.0% |
| !! | TAGTAAAAGTGTCATGTCTA+TGG | + | chr5.3:31896160-31896179 | MS.gene054658:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr5.3:31895988-31895969 | None:intergenic | 30.0% |
| AAGTACACAGAACCATAACT+TGG | - | chr5.3:31896385-31896404 | None:intergenic | 35.0% | |
| AATTGCCATGTACCAAGTTA+TGG | + | chr5.3:31896370-31896389 | MS.gene054658:intron | 35.0% | |
| AGGAACAGTTGATCTTGATA+AGG | + | chr5.3:31895435-31895454 | MS.gene054658:CDS | 35.0% | |
| AGTGGAAGAAAGAAGAAAAC+AGG | + | chr5.3:31898390-31898409 | MS.gene054658:CDS | 35.0% | |
| ATGTTCTTCTGTATCCAAGA+AGG | + | chr5.3:31895883-31895902 | MS.gene054658:intron | 35.0% | |
| CAAATATATCAGACGAAGAG+GGG | - | chr5.3:31897780-31897799 | None:intergenic | 35.0% | |
| CAAATGTAAAATCTTGGGTG+TGG | + | chr5.3:31897541-31897560 | MS.gene054658:intron | 35.0% | |
| CTACGAGTGTGTTAATGTTA+TGG | - | chr5.3:31895157-31895176 | None:intergenic | 35.0% | |
| GGAGAATGCTAATACATAGA+TGG | - | chr5.3:31897759-31897778 | None:intergenic | 35.0% | |
| GTGTGCAATAAATCTGTAAC+AGG | + | chr5.3:31897023-31897042 | MS.gene054658:intron | 35.0% | |
| TCATGCGCTATCAATTAACT+GGG | - | chr5.3:31897200-31897219 | None:intergenic | 35.0% | |
| TGATGAATTGCATACTTTGC+AGG | + | chr5.3:31895812-31895831 | MS.gene054658:CDS | 35.0% | |
| TTGTCAAGATCACTGAAGTA+TGG | - | chr5.3:31896337-31896356 | None:intergenic | 35.0% | |
| ! | CAATTTTGAACGTCTTCACA+TGG | - | chr5.3:31897314-31897333 | None:intergenic | 35.0% |
| ! | GTTACTAGCTCTTGGAATTT+AGG | - | chr5.3:31897683-31897702 | None:intergenic | 35.0% |
| !!! | GTTTTAGGTTTGATTCTACC+CGG | + | chr5.3:31898163-31898182 | MS.gene054658:intron | 35.0% |
| AACATCCTCTTGCAAATGCA+AGG | + | chr5.3:31896993-31897012 | MS.gene054658:intron | 40.0% | |
| AACCGTCAAACTGTGTTATC+TGG | - | chr5.3:31896652-31896671 | None:intergenic | 40.0% | |
| AAGATCAACTGTTCCTGTCT+CGG | - | chr5.3:31895431-31895450 | None:intergenic | 40.0% | |
| AATCATGGCAGACTCGTATA+TGG | + | chr5.3:31895712-31895731 | MS.gene054658:intron | 40.0% | |
| ACCATTCATTGCTGAAATCC+TGG | + | chr5.3:31898327-31898346 | MS.gene054658:intron | 40.0% | |
| ACTCTACTTATAACCAGCCA+AGG | - | chr5.3:31897639-31897658 | None:intergenic | 40.0% | |
| AGACGGATCTTATACCTTCT+TGG | - | chr5.3:31895900-31895919 | None:intergenic | 40.0% | |
| ATGGATGTATACCGTTGCAA+AGG | + | chr5.3:31895768-31895787 | MS.gene054658:CDS | 40.0% | |
| ATGGCTAGAGGAGATTCTTT+GGG | + | chr5.3:31895731-31895750 | MS.gene054658:CDS | 40.0% | |
| CAGAACCATAACTTGGTACA+TGG | - | chr5.3:31896378-31896397 | None:intergenic | 40.0% | |
| CATTCAAGACTCCTTTGCAA+CGG | - | chr5.3:31895782-31895801 | None:intergenic | 40.0% | |
| CTCATGCGCTATCAATTAAC+TGG | - | chr5.3:31897201-31897220 | None:intergenic | 40.0% | |
| CTTAGTTATAGGGTCACTCA+AGG | + | chr5.3:31897511-31897530 | MS.gene054658:intron | 40.0% | |
| CTTGAGTGACCCTATAACTA+AGG | - | chr5.3:31897513-31897532 | None:intergenic | 40.0% | |
| GAAATAAATGCAGCCCACTT+GGG | + | chr5.3:31898094-31898113 | MS.gene054658:intron | 40.0% | |
| GACTACAACAGTTATGCCAA+GGG | - | chr5.3:31896925-31896944 | None:intergenic | 40.0% | |
| GATGAGAGTTTGATAGAGCA+AGG | + | chr5.3:31897068-31897087 | MS.gene054658:intron | 40.0% | |
| TAAACTGCAGTCATGAAGGT+GGG | - | chr5.3:31895294-31895313 | None:intergenic | 40.0% | |
| TAAGCATGCTGCACATTTAG+AGG | + | chr5.3:31895332-31895351 | MS.gene054658:intron | 40.0% | |
| TAGTCACACACCTCGTATAA+GGG | + | chr5.3:31897112-31897131 | MS.gene054658:intron | 40.0% | |
| TATATGAGATCGTTCCTGCT+CGG | + | chr5.3:31898366-31898385 | MS.gene054658:CDS | 40.0% | |
| TATGGCTAGAGGAGATTCTT+TGG | + | chr5.3:31895730-31895749 | MS.gene054658:CDS | 40.0% | |
| TGAAATAAATGCAGCCCACT+TGG | + | chr5.3:31898093-31898112 | MS.gene054658:intron | 40.0% | |
| TGACTACAACAGTTATGCCA+AGG | - | chr5.3:31896926-31896945 | None:intergenic | 40.0% | |
| TGCCAGATAACACAGTTTGA+CGG | + | chr5.3:31896647-31896666 | MS.gene054658:intron | 40.0% | |
| TGTGATCAGAACGATCACAA+AGG | - | chr5.3:31896704-31896723 | None:intergenic | 40.0% | |
| ! | AGAACAAAGCATTCTCTGCT+AGG | - | chr5.3:31895613-31895632 | None:intergenic | 40.0% |
| ! | AGCTCTTGGAATTTAGGGTT+TGG | - | chr5.3:31897677-31897696 | None:intergenic | 40.0% |
| ! | AGTGTGCCAATTTCGGTTTT+AGG | + | chr5.3:31898148-31898167 | MS.gene054658:intron | 40.0% |
| ! | GAGCTTTCAAGCCATTGATT+AGG | - | chr5.3:31898542-31898561 | None:intergenic | 40.0% |
| !! | GTTGATTTGGTATCTGCAGA+AGG | + | chr5.3:31895098-31895117 | MS.gene054658:CDS | 40.0% |
| !!! | ACAGAATTTTAAGGCAAGGG+AGG | - | chr5.3:31897436-31897455 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5.3:31896227-31896246 | MS.gene054658:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr5.3:31896246-31896227 | None:intergenic | 40.0% |
| AAATATTGGCATGGTGGCAG+TGG | + | chr5.3:31897230-31897249 | MS.gene054658:intron | 45.0% | |
| ACACAGTTTGACGGTTACAC+AGG | + | chr5.3:31896656-31896675 | MS.gene054658:intron | 45.0% | |
| ACCTTGGAGTGTGCCAATTT+CGG | + | chr5.3:31898141-31898160 | MS.gene054658:intron | 45.0% | |
| ACTTATAACCAGCCAAGGCA+AGG | - | chr5.3:31897634-31897653 | None:intergenic | 45.0% | |
| AGGAATAAGCTAACTGCCTC+TGG | + | chr5.3:31896580-31896599 | MS.gene054658:CDS | 45.0% | |
| AGTACACTATTTATGCCCCG+TGG | - | chr5.3:31895529-31895548 | None:intergenic | 45.0% | |
| ATAAGATCCGTCTTCACCAG+TGG | + | chr5.3:31895907-31895926 | MS.gene054658:intron | 45.0% | |
| ATCAACGATTCCTGCTACCA+CGG | + | chr5.3:31895509-31895528 | MS.gene054658:intron | 45.0% | |
| CACAGTTTGACGGTTACACA+GGG | + | chr5.3:31896657-31896676 | MS.gene054658:intron | 45.0% | |
| CAGGTAAACTGCAGTCATGA+AGG | - | chr5.3:31895298-31895317 | None:intergenic | 45.0% | |
| CCAAAATAGCCCACCGAAAT+TGG | - | chr5.3:31898191-31898210 | None:intergenic | 45.0% | |
| CCTCTTGCAAATGCAAGGTA+AGG | + | chr5.3:31896998-31897017 | MS.gene054658:intron | 45.0% | |
| CCTTACCTTGCATTTGCAAG+AGG | - | chr5.3:31897001-31897020 | None:intergenic | 45.0% | |
| CTAGTCACACACCTCGTATA+AGG | + | chr5.3:31897111-31897130 | MS.gene054658:intron | 45.0% | |
| CTTATAACCAGCCAAGGCAA+GGG | - | chr5.3:31897633-31897652 | None:intergenic | 45.0% | |
| GAAAGCTCTTGCAACCTGTT+AGG | + | chr5.3:31898554-31898573 | MS.gene054658:CDS | 45.0% | |
| GCATTCTCTGCTAGGCATTA+TGG | - | chr5.3:31895605-31895624 | None:intergenic | 45.0% | |
| GCCAGGATTTCAGCAATGAA+TGG | - | chr5.3:31898331-31898350 | None:intergenic | 45.0% | |
| GTAAACTGCAGTCATGAAGG+TGG | - | chr5.3:31895295-31895314 | None:intergenic | 45.0% | |
| TGCATAACCACTGGTGAAGA+CGG | - | chr5.3:31895917-31895936 | None:intergenic | 45.0% | |
| TGTAAAATCTTGGGTGTGGG+AGG | + | chr5.3:31897545-31897564 | MS.gene054658:intron | 45.0% | |
| TTACTGCAGTATCGTAAGCG+TGG | - | chr5.3:31895232-31895251 | None:intergenic | 45.0% | |
| TTCATTGCTGAAATCCTGGC+AGG | + | chr5.3:31898331-31898350 | MS.gene054658:intron | 45.0% | |
| ! | ATTCTACCCGGTGCCAATTT+CGG | + | chr5.3:31898175-31898194 | MS.gene054658:intron | 45.0% |
| !! | GGCAGTGGTGTTACTTTGTT+AGG | + | chr5.3:31897245-31897264 | MS.gene054658:intron | 45.0% |
| !!! | CCAATTTCGGTGGGCTATTT+TGG | + | chr5.3:31898188-31898207 | MS.gene054658:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr5.3:31896226-31896245 | MS.gene054658:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr5.3:31896245-31896226 | None:intergenic | 45.0% |
| AAGTGAAGACTCCCTTGCCT+TGG | + | chr5.3:31897619-31897638 | MS.gene054658:intron | 50.0% | |
| ACCATATGCATCTCCGAGAC+AGG | + | chr5.3:31895415-31895434 | MS.gene054658:CDS | 50.0% | |
| ACCGAAATTGGCACACTCCA+AGG | - | chr5.3:31898145-31898164 | None:intergenic | 50.0% | |
| AGGTGTGTGACTAGACTGTG+TGG | - | chr5.3:31897105-31897124 | None:intergenic | 50.0% | |
| ATAAGCTAACTGCCTCTGGC+TGG | + | chr5.3:31896584-31896603 | MS.gene054658:CDS | 50.0% | |
| GCAGACTCGTATATGGCTAG+AGG | + | chr5.3:31895719-31895738 | MS.gene054658:intron | 50.0% | |
| GGCATTGTCTTGTGCATGCA+CGG | + | chr5.3:31898446-31898465 | MS.gene054658:intron | 50.0% | |
| GTCAGCAACTCCTAGATGAC+TGG | + | chr5.3:31896620-31896639 | MS.gene054658:CDS | 50.0% | |
| TAAATGCAGCCCACTTGGGT+TGG | + | chr5.3:31898098-31898117 | MS.gene054658:intron | 50.0% | |
| TATTTATGCCCCGTGGTAGC+AGG | - | chr5.3:31895522-31895541 | None:intergenic | 50.0% | |
| TCAACGATTCCTGCTACCAC+GGG | + | chr5.3:31895510-31895529 | MS.gene054658:intron | 50.0% | |
| TCCTGTCTCGGAGATGCATA+TGG | - | chr5.3:31895419-31895438 | None:intergenic | 50.0% | |
| TCTTTCTTCCACTTCCGAGC+AGG | - | chr5.3:31898383-31898402 | None:intergenic | 50.0% | |
| TTGGTATCTGCAGAAGGCTC+TGG | + | chr5.3:31895104-31895123 | MS.gene054658:CDS | 50.0% | |
| ! | CATCAAGTGAGAGTGTGAGC+TGG | + | chr5.3:31897270-31897289 | MS.gene054658:intron | 50.0% |
| AGATCGTTCCTGCTCGGAAG+TGG | + | chr5.3:31898372-31898391 | MS.gene054658:CDS | 55.0% | |
| CAACGATTCCTGCTACCACG+GGG | + | chr5.3:31895511-31895530 | MS.gene054658:intron | 55.0% | |
| CTGCAGTATCGTAAGCGTGG+CGG | - | chr5.3:31895229-31895248 | None:intergenic | 55.0% | |
| GCAACTCCTAGATGACTGGC+AGG | + | chr5.3:31896624-31896643 | MS.gene054658:CDS | 55.0% | |
| TAGCCCACCGAAATTGGCAC+CGG | - | chr5.3:31898185-31898204 | None:intergenic | 55.0% | |
| TAGTTCTCTCACTGCCTGCC+AGG | - | chr5.3:31898348-31898367 | None:intergenic | 55.0% | |
| ! | TACCCGGTGCCAATTTCGGT+GGG | + | chr5.3:31898179-31898198 | MS.gene054658:intron | 55.0% |
| !! | AGAAGGCTCTGGAGCTCTAG+AGG | + | chr5.3:31895115-31895134 | MS.gene054658:CDS | 55.0% |
| !! | AGCTCTAGAGGAACTCGAGG+AGG | + | chr5.3:31895127-31895146 | MS.gene054658:CDS | 55.0% |
| !! | TGGAGCTCTAGAGGAACTCG+AGG | + | chr5.3:31895124-31895143 | MS.gene054658:CDS | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr5.3:31898110-31898129 | None:intergenic | 60.0% | |
| AGCCCACCGAAATTGGCACC+GGG | - | chr5.3:31898184-31898203 | None:intergenic | 60.0% | |
| CTGGCACCTGCCAGTCATCT+AGG | - | chr5.3:31896633-31896652 | None:intergenic | 60.0% | |
| GAAGACTCCCTTGCCTTGGC+TGG | + | chr5.3:31897623-31897642 | MS.gene054658:intron | 60.0% | |
| ! | CTACCCGGTGCCAATTTCGG+TGG | + | chr5.3:31898178-31898197 | MS.gene054658:intron | 60.0% |
| !! | GTGGTGTTGGCTTGGGACCT+TGG | + | chr5.3:31898125-31898144 | MS.gene054658:intron | 60.0% |
| !! | TGGCCTGGTGGTGTTGGCTT+GGG | + | chr5.3:31898118-31898137 | MS.gene054658:intron | 60.0% |
| !! | TTGGCCTGGTGGTGTTGGCT+TGG | + | chr5.3:31898117-31898136 | MS.gene054658:intron | 60.0% |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | + | chr5.3:31898112-31898131 | MS.gene054658:intron | 60.0% |
| CACCACCAGGCCAACCCAAG+TGG | - | chr5.3:31898111-31898130 | None:intergenic | 65.0% | |
| GACACGTGTCAGCCAGCCAG+AGG | - | chr5.3:31896599-31896618 | None:intergenic | 65.0% | |
| GGTCCCAAGCCAACACCACC+AGG | - | chr5.3:31898124-31898143 | None:intergenic | 65.0% | |
| !! | GCAGCCCACTTGGGTTGGCC+TGG | + | chr5.3:31898103-31898122 | MS.gene054658:intron | 70.0% |
| !! | GCCCACTTGGGTTGGCCTGG+TGG | + | chr5.3:31898106-31898125 | MS.gene054658:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 31895077 | 31898575 | 31895077 | ID=MS.gene054658 |
| chr5.3 | mRNA | 31895077 | 31898575 | 31895077 | ID=MS.gene054658.t1;Parent=MS.gene054658 |
| chr5.3 | exon | 31895077 | 31895247 | 31895077 | ID=MS.gene054658.t1.exon1;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31895077 | 31895247 | 31895077 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| chr5.3 | exon | 31895364 | 31895456 | 31895364 | ID=MS.gene054658.t1.exon2;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31895364 | 31895456 | 31895364 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| chr5.3 | exon | 31895723 | 31895833 | 31895723 | ID=MS.gene054658.t1.exon3;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31895723 | 31895833 | 31895723 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| chr5.3 | exon | 31896553 | 31896645 | 31896553 | ID=MS.gene054658.t1.exon4;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31896553 | 31896645 | 31896553 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| chr5.3 | exon | 31898353 | 31898434 | 31898353 | ID=MS.gene054658.t1.exon5;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31898353 | 31898434 | 31898353 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| chr5.3 | exon | 31898517 | 31898575 | 31898517 | ID=MS.gene054658.t1.exon6;Parent=MS.gene054658.t1 |
| chr5.3 | CDS | 31898517 | 31898575 | 31898517 | ID=cds.MS.gene054658.t1;Parent=MS.gene054658.t1 |
| Gene Sequence |
| Protein sequence |
