Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40806.t1 | XP_003591197.1 | 99.8 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 4.30E-256 | 893.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40806.t1 | O22478 | 73.5 | 533 | 134 | 4 | 1 | 532 | 1 | 527 | 4.0e-170 | 599.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40806.t1 | G7I9F7 | 99.8 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 3.1e-256 | 893.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049193 | MS.gene40806 | 0.825503 | 4.52E-54 | -1.69E-46 |
MS.gene050084 | MS.gene40806 | 0.818731 | 1.68E-52 | -1.69E-46 |
MS.gene050085 | MS.gene40806 | 0.821274 | 4.40E-53 | -1.69E-46 |
MS.gene050359 | MS.gene40806 | 0.8634 | 2.56E-64 | -1.69E-46 |
MS.gene050361 | MS.gene40806 | 0.816647 | 4.96E-52 | -1.69E-46 |
MS.gene050414 | MS.gene40806 | 0.810569 | 1.08E-50 | -1.69E-46 |
MS.gene050551 | MS.gene40806 | 0.827612 | 1.42E-54 | -1.69E-46 |
MS.gene050646 | MS.gene40806 | 0.844878 | 5.76E-59 | -1.69E-46 |
MS.gene050654 | MS.gene40806 | 0.818225 | 2.19E-52 | -1.69E-46 |
MS.gene051102 | MS.gene40806 | 0.802515 | 5.41E-49 | -1.69E-46 |
MS.gene051209 | MS.gene40806 | 0.803439 | 3.48E-49 | -1.69E-46 |
MS.gene051381 | MS.gene40806 | 0.807722 | 4.40E-50 | -1.69E-46 |
MS.gene052242 | MS.gene40806 | -0.808102 | 3.65E-50 | -1.69E-46 |
MS.gene052307 | MS.gene40806 | 0.804566 | 2.03E-49 | -1.69E-46 |
MS.gene052514 | MS.gene40806 | 0.816947 | 4.25E-52 | -1.69E-46 |
MS.gene052609 | MS.gene40806 | 0.840847 | 6.79E-58 | -1.69E-46 |
MS.gene052776 | MS.gene40806 | 0.805231 | 1.47E-49 | -1.69E-46 |
MS.gene053143 | MS.gene40806 | 0.829036 | 6.44E-55 | -1.69E-46 |
MS.gene05315 | MS.gene40806 | 0.805476 | 1.31E-49 | -1.69E-46 |
MS.gene053620 | MS.gene40806 | 0.805545 | 1.27E-49 | -1.69E-46 |
MS.gene053726 | MS.gene40806 | 0.800416 | 1.46E-48 | -1.69E-46 |
MS.gene056097 | MS.gene40806 | 0.84606 | 2.75E-59 | -1.69E-46 |
MS.gene056507 | MS.gene40806 | 0.816583 | 5.13E-52 | -1.69E-46 |
MS.gene057174 | MS.gene40806 | 0.812461 | 4.19E-51 | -1.69E-46 |
MS.gene058292 | MS.gene40806 | 0.800744 | 1.25E-48 | -1.69E-46 |
MS.gene059007 | MS.gene40806 | 0.889225 | 2.93E-73 | -1.69E-46 |
MS.gene060933 | MS.gene40806 | 0.808128 | 3.61E-50 | -1.69E-46 |
MS.gene061006 | MS.gene40806 | 0.808539 | 2.95E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40806.t1 | MTR_1g083810 | 99.812 | 533 | 1 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1098 |
MS.gene40806.t1 | MTR_7g112350 | 88.722 | 532 | 60 | 0 | 1 | 532 | 1 | 532 | 0.0 | 987 |
MS.gene40806.t1 | MTR_2g034900 | 86.278 | 532 | 69 | 3 | 1 | 531 | 1 | 529 | 0.0 | 943 |
MS.gene40806.t1 | MTR_4g121435 | 73.655 | 539 | 123 | 6 | 1 | 531 | 1 | 528 | 0.0 | 791 |
MS.gene40806.t1 | MTR_4g131510 | 80.751 | 426 | 82 | 0 | 79 | 504 | 1 | 426 | 0.0 | 732 |
MS.gene40806.t1 | MTR_4g133040 | 73.363 | 443 | 114 | 3 | 70 | 511 | 3 | 442 | 0.0 | 669 |
MS.gene40806.t1 | MTR_4g133030 | 75.587 | 426 | 103 | 1 | 83 | 507 | 2 | 427 | 0.0 | 651 |
MS.gene40806.t1 | MTR_8g027585 | 73.086 | 431 | 113 | 2 | 105 | 533 | 18 | 447 | 0.0 | 641 |
MS.gene40806.t1 | MTR_4g131000 | 69.481 | 462 | 103 | 3 | 79 | 504 | 1 | 460 | 0.0 | 629 |
MS.gene40806.t1 | MTR_4g132980 | 70.794 | 428 | 96 | 2 | 79 | 506 | 1 | 399 | 0.0 | 602 |
MS.gene40806.t1 | MTR_4g127570 | 61.395 | 430 | 95 | 4 | 83 | 511 | 2 | 361 | 1.26e-170 | 489 |
MS.gene40806.t1 | MTR_1g053470 | 71.733 | 329 | 77 | 4 | 208 | 533 | 1 | 316 | 7.15e-161 | 460 |
MS.gene40806.t1 | MTR_1g053470 | 26.047 | 215 | 145 | 6 | 108 | 314 | 30 | 238 | 9.83e-11 | 63.5 |
MS.gene40806.t1 | MTR_1g053470 | 71.517 | 323 | 76 | 4 | 208 | 527 | 1 | 310 | 2.53e-155 | 448 |
MS.gene40806.t1 | MTR_1g053470 | 75.000 | 300 | 72 | 3 | 208 | 504 | 1 | 300 | 3.75e-155 | 445 |
MS.gene40806.t1 | MTR_7g112150 | 47.885 | 520 | 246 | 12 | 1 | 499 | 1 | 516 | 4.66e-147 | 432 |
MS.gene40806.t1 | MTR_4g132980 | 71.875 | 288 | 64 | 1 | 219 | 506 | 1 | 271 | 6.04e-143 | 415 |
MS.gene40806.t1 | MTR_4g013265 | 50.708 | 424 | 96 | 7 | 110 | 532 | 11 | 322 | 8.54e-127 | 374 |
MS.gene40806.t1 | MTR_7g112160 | 43.874 | 506 | 242 | 13 | 14 | 499 | 15 | 498 | 2.27e-113 | 346 |
MS.gene40806.t1 | MTR_7g113400 | 46.489 | 413 | 200 | 9 | 14 | 408 | 15 | 424 | 3.41e-103 | 317 |
MS.gene40806.t1 | MTR_4g132960 | 65.789 | 190 | 48 | 1 | 318 | 507 | 3 | 175 | 1.15e-76 | 241 |
MS.gene40806.t1 | MTR_4g132967 | 59.474 | 190 | 43 | 1 | 318 | 507 | 7 | 162 | 8.31e-64 | 207 |
MS.gene40806.t1 | MTR_1g066760 | 29.231 | 520 | 319 | 14 | 14 | 499 | 10 | 514 | 5.02e-52 | 185 |
MS.gene40806.t1 | MTR_4g124270 | 43.220 | 118 | 42 | 2 | 264 | 381 | 30 | 122 | 6.98e-20 | 87.4 |
MS.gene40806.t1 | MTR_4g124270 | 32.105 | 190 | 63 | 3 | 121 | 310 | 13 | 136 | 2.39e-18 | 82.8 |
MS.gene40806.t1 | MTR_7g113402 | 46.154 | 91 | 34 | 3 | 420 | 508 | 22 | 99 | 1.28e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40806.t1 | AT3G06720 | 82.836 | 536 | 84 | 6 | 1 | 532 | 1 | 532 | 0.0 | 897 |
MS.gene40806.t1 | AT3G06720 | 82.836 | 536 | 84 | 6 | 1 | 532 | 1 | 532 | 0.0 | 897 |
MS.gene40806.t1 | AT4G16143 | 82.463 | 536 | 87 | 2 | 1 | 531 | 1 | 534 | 0.0 | 894 |
MS.gene40806.t1 | AT4G16143 | 82.463 | 536 | 87 | 2 | 1 | 531 | 1 | 534 | 0.0 | 894 |
MS.gene40806.t1 | AT1G09270 | 74.677 | 541 | 123 | 5 | 1 | 531 | 1 | 537 | 0.0 | 797 |
MS.gene40806.t1 | AT1G09270 | 74.677 | 541 | 123 | 5 | 1 | 531 | 1 | 537 | 0.0 | 797 |
MS.gene40806.t1 | AT1G02690 | 70.718 | 543 | 141 | 5 | 1 | 531 | 1 | 537 | 0.0 | 785 |
MS.gene40806.t1 | AT1G02690 | 70.588 | 544 | 141 | 6 | 1 | 531 | 1 | 538 | 0.0 | 781 |
MS.gene40806.t1 | AT4G02150 | 70.795 | 541 | 137 | 5 | 1 | 531 | 1 | 530 | 0.0 | 773 |
MS.gene40806.t1 | AT1G09270 | 78.947 | 456 | 91 | 3 | 79 | 531 | 2 | 455 | 0.0 | 716 |
MS.gene40806.t1 | AT5G49310 | 65.868 | 501 | 164 | 3 | 1 | 501 | 1 | 494 | 0.0 | 655 |
MS.gene40806.t1 | AT3G05720 | 64.300 | 493 | 157 | 4 | 13 | 497 | 9 | 490 | 0.0 | 620 |
MS.gene40806.t1 | AT3G05720 | 64.300 | 493 | 157 | 4 | 13 | 497 | 9 | 490 | 0.0 | 620 |
MS.gene40806.t1 | AT4G02150 | 71.463 | 417 | 102 | 3 | 1 | 408 | 1 | 409 | 0.0 | 610 |
MS.gene40806.t1 | AT5G52000 | 54.762 | 420 | 177 | 6 | 79 | 497 | 14 | 421 | 1.35e-145 | 426 |
MS.gene40806.t1 | AT5G49305 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.14e-86 | 271 |
MS.gene40806.t1 | AT5G49305 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.14e-86 | 271 |
MS.gene40806.t1 | AT5G49305 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.14e-86 | 271 |
MS.gene40806.t1 | AT5G49305 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.14e-86 | 271 |
MS.gene40806.t1 | AT5G49305 | 40.183 | 438 | 197 | 11 | 78 | 506 | 2 | 383 | 7.14e-86 | 271 |
MS.gene40806.t1 | AT1G32880 | 61.224 | 147 | 52 | 3 | 363 | 507 | 40 | 183 | 9.78e-55 | 182 |
MS.gene40806.t1 | AT5G03070 | 28.298 | 523 | 320 | 14 | 14 | 499 | 10 | 514 | 2.46e-47 | 172 |
Find 135 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGGGCTTTGGTTCCTCTTT+TGG | 0.163040 | 1.2:+59665888 | MS.gene40806:CDS |
GTGATCGAGGCCAATATATT+TGG | 0.282098 | 1.2:+59667975 | MS.gene40806:CDS |
CCCAGCTGTAATGTTTGATA+TGG | 0.317154 | 1.2:-59667828 | None:intergenic |
CCTGCACTTCCTGCTCTTGC+TGG | 0.324162 | 1.2:+59666541 | MS.gene40806:CDS |
TGTTCTCGGTCACGGGGCTT+TGG | 0.338208 | 1.2:+59665876 | MS.gene40806:CDS |
TGTTGCAGTTTGAGGCAGCC+TGG | 0.340818 | 1.2:+59665493 | MS.gene40806:intron |
TTGCAGGCTGTGTGGGCATT+AGG | 0.348382 | 1.2:+59665817 | MS.gene40806:intron |
GAGAACAAGATCACGACATC+TGG | 0.355494 | 1.2:-59665860 | None:intergenic |
TGAGGTTCCTTCTGTGCCTT+CGG | 0.360279 | 1.2:+59668536 | MS.gene40806:CDS |
GGACACTTTCAAACTTCTGC+AGG | 0.363703 | 1.2:+59665959 | MS.gene40806:CDS |
CCTCAGCATCATCAATCATC+TGG | 0.369585 | 1.2:-59668362 | None:intergenic |
GTTGCGACGGACCTCGGTCC+TGG | 0.372521 | 1.2:-59664212 | None:intergenic |
CCAGGCGATGCTTCTCAATC+AGG | 0.373845 | 1.2:+59668495 | MS.gene40806:CDS |
GAGGTTCCTTCTGTGCCTTC+GGG | 0.378694 | 1.2:+59668537 | MS.gene40806:CDS |
TAATACACCCTTGACTTACT+AGG | 0.382527 | 1.2:-59668206 | None:intergenic |
TCGGTCCTGGAGTTTGCGTT+TGG | 0.385924 | 1.2:-59664199 | None:intergenic |
GCATCAAGAAGGAAGCTTGC+TGG | 0.387204 | 1.2:+59667804 | MS.gene40806:CDS |
TGGGAATAAACAGCAGATTC+AGG | 0.391086 | 1.2:+59667847 | MS.gene40806:CDS |
GTGATCTTGTTCTCGGTCAC+GGG | 0.391108 | 1.2:+59665869 | MS.gene40806:CDS |
ACGGCGACGGCGGCCTTCTT+CGG | 0.399895 | 1.2:-59664257 | None:intergenic |
GTTGGAACATTTGCCAACTA+TGG | 0.400235 | 1.2:+59664605 | MS.gene40806:intron |
TAGGATTGTGACAGTTTGTC+TGG | 0.404102 | 1.2:+59668263 | MS.gene40806:CDS |
GGAAGACTTTCCGCAGTTGC+AGG | 0.411485 | 1.2:+59664873 | MS.gene40806:CDS |
AGATGTCGTGATCTTGTTCT+CGG | 0.411575 | 1.2:+59665862 | MS.gene40806:CDS |
CTCTAACGTCGTTGAGAAGA+AGG | 0.413914 | 1.2:+59664381 | MS.gene40806:CDS |
CACCAGAGGACCAAATATAT+TGG | 0.421774 | 1.2:-59667985 | None:intergenic |
GGCCAATATATTTGGTCCTC+TGG | 0.429004 | 1.2:+59667983 | MS.gene40806:CDS |
TTTCGAAAGCTGCTATCAAT+TGG | 0.433330 | 1.2:+59664681 | MS.gene40806:CDS |
TGAAGATTCTTGAGACATAC+TGG | 0.434618 | 1.2:+59668445 | MS.gene40806:CDS |
CAATAGAAGCTCAACAAGTC+GGG | 0.443446 | 1.2:-59666677 | None:intergenic |
TATCAAGAAAGAGGCTGCTT+GGG | 0.447132 | 1.2:+59668034 | MS.gene40806:CDS |
CGTGATCTTGTTCTCGGTCA+CGG | 0.451391 | 1.2:+59665868 | MS.gene40806:CDS |
AAGTCTTGACTGATGCCTGC+TGG | 0.451595 | 1.2:+59666587 | MS.gene40806:CDS |
TCTCTTCACGACGATTCTTA+CGG | 0.453848 | 1.2:-59664300 | None:intergenic |
ATTCCTGCTCTTCGTACTGT+TGG | 0.456615 | 1.2:+59666834 | MS.gene40806:CDS |
CCAGCAAGAGCAGGAAGTGC+AGG | 0.456751 | 1.2:-59666541 | None:intergenic |
TAGTGACGATGTCCGTGAAC+AGG | 0.458807 | 1.2:+59665611 | MS.gene40806:CDS |
GTTGCAGTTTGAGGCAGCCT+GGG | 0.460182 | 1.2:+59665494 | MS.gene40806:intron |
CATTTGCCAACTATGGTTGC+TGG | 0.462444 | 1.2:+59664612 | MS.gene40806:CDS |
GCTTTGACAAACATAGCTTC+TGG | 0.467363 | 1.2:+59665516 | MS.gene40806:CDS |
CAACACAGAGATTTATGAAA+AGG | 0.468157 | 1.2:+59668419 | MS.gene40806:CDS |
ATATCAAGAAAGAGGCTGCT+TGG | 0.477404 | 1.2:+59668033 | MS.gene40806:CDS |
GATTGATGATGCTGAGGGGT+TGG | 0.479588 | 1.2:+59668368 | MS.gene40806:CDS |
TTCTTATCTGTCCCGATCCT+AGG | 0.480160 | 1.2:+59668244 | MS.gene40806:CDS |
AGACAAACTGTCACAATCCT+AGG | 0.480993 | 1.2:-59668261 | None:intergenic |
CCTGATTGAGAAGCATCGCC+TGG | 0.486344 | 1.2:-59668495 | None:intergenic |
GTCTGTATAACCTCCTCAAT+CGG | 0.488244 | 1.2:-59664814 | None:intergenic |
GTATCGGTTGCGACGGACCT+CGG | 0.489943 | 1.2:-59664218 | None:intergenic |
ACCATATCAAACATTACAGC+TGG | 0.491638 | 1.2:+59667827 | MS.gene40806:CDS |
GCTATCTCAAATGCTACATC+TGG | 0.492465 | 1.2:+59668056 | MS.gene40806:CDS |
ATCGTCCAAACGCAAACTCC+AGG | 0.492966 | 1.2:+59664194 | MS.gene40806:CDS |
ACCTGATCAAAAGGAGGCTG+TGG | 0.496155 | 1.2:-59665988 | None:intergenic |
ATTTCTCAGCATAGAAAGCT+TGG | 0.497993 | 1.2:-59665929 | None:intergenic |
CTATGCTGAGAAATGCTACC+TGG | 0.506227 | 1.2:+59665938 | MS.gene40806:CDS |
CACACACCAGCAACCATAGT+TGG | 0.509375 | 1.2:-59664618 | None:intergenic |
GTTCCTTCTGTGCCTTCGGG+TGG | 0.510496 | 1.2:+59668540 | MS.gene40806:CDS |
ACAATAGAAGCTCAACAAGT+CGG | 0.519609 | 1.2:-59666678 | None:intergenic |
CTTGAAAACATCTTGAAGGT+TGG | 0.523089 | 1.2:+59668291 | MS.gene40806:CDS |
GCGGCCTTCTTCGGCATCGA+CGG | 0.523227 | 1.2:-59664248 | None:intergenic |
AACTGTCACAATCCTAGGAT+CGG | 0.523984 | 1.2:-59668256 | None:intergenic |
GGAATTAGCACTGAAGGAGA+TGG | 0.524492 | 1.2:-59666816 | None:intergenic |
TCTCAACCATGGTGTCTTCA+CGG | 0.525122 | 1.2:-59664276 | None:intergenic |
AAGATATGATAGTGCCCAGC+AGG | 0.525630 | 1.2:-59666602 | None:intergenic |
AGAACGTACTCCACCGATTG+AGG | 0.529104 | 1.2:+59664801 | MS.gene40806:intron |
TCATTCAATTGTGCCAAAAG+AGG | 0.531241 | 1.2:-59665901 | None:intergenic |
ATCTCAAATGCTACATCTGG+TGG | 0.531801 | 1.2:+59668059 | MS.gene40806:CDS |
ATTCAAGCTGTAATTGAAGC+TGG | 0.533221 | 1.2:+59666646 | MS.gene40806:CDS |
GTTGCCGTCGATGCCGAAGA+AGG | 0.533610 | 1.2:+59664244 | MS.gene40806:CDS |
AGCTATGTTTGTCAAAGCCC+AGG | 0.533920 | 1.2:-59665511 | None:intergenic |
AGGCCTTGAAAACATCTTGA+AGG | 0.539236 | 1.2:+59668287 | MS.gene40806:CDS |
TGGGCATTAGGAAATGTTGC+TGG | 0.539661 | 1.2:+59665829 | MS.gene40806:CDS |
AGTCTTGACTGATGCCTGCT+GGG | 0.542032 | 1.2:+59666588 | MS.gene40806:CDS |
ACTGTCACAATCCTAGGATC+GGG | 0.542887 | 1.2:-59668255 | None:intergenic |
GACACTTTCAAACTTCTGCA+GGG | 0.542937 | 1.2:+59665960 | MS.gene40806:CDS |
TGAGTTTGATATCAAGAAAG+AGG | 0.543652 | 1.2:+59668025 | MS.gene40806:CDS |
GATTCTTGAGACATACTGGT+TGG | 0.544779 | 1.2:+59668449 | MS.gene40806:CDS |
TGAATAAGACCAGCAAGAGC+AGG | 0.545161 | 1.2:-59666550 | None:intergenic |
TCTCTGTGTTGTCATGACTC+TGG | 0.550839 | 1.2:-59668407 | None:intergenic |
GGTCCGTCGCAACCGATACA+AGG | 0.550926 | 1.2:+59664222 | MS.gene40806:CDS |
TCTTGAGACATACTGGTTGG+AGG | 0.551326 | 1.2:+59668452 | MS.gene40806:CDS |
ACTGTTGGAAACATTGTCAC+TGG | 0.554408 | 1.2:+59666849 | MS.gene40806:CDS |
CATCTTGAAGGTTGGAGAAG+CGG | 0.554732 | 1.2:+59668299 | MS.gene40806:CDS |
AAGTCAAATATACCTGTTCA+CGG | 0.556545 | 1.2:-59665623 | None:intergenic |
TTTCCAACAGTACGAAGAGC+AGG | 0.559463 | 1.2:-59666837 | None:intergenic |
CATCGACGGCAACCTTGTAT+CGG | 0.559979 | 1.2:-59664234 | None:intergenic |
CTCAGCATCATCAATCATCT+GGG | 0.560931 | 1.2:-59668361 | None:intergenic |
ATTGTGACAGTTTGTCTGGA+AGG | 0.563823 | 1.2:+59668267 | MS.gene40806:CDS |
GACAGGTACCTAGTAAGTCA+AGG | 0.569304 | 1.2:+59668198 | MS.gene40806:intron |
CTAAGGTGGTAATTGACCAT+GGG | 0.574999 | 1.2:+59665553 | MS.gene40806:CDS |
GCAGAAGTTTGAAAGTGTCC+AGG | 0.579750 | 1.2:-59665956 | None:intergenic |
TGGAACATCTGAAAACACTA+AGG | 0.579810 | 1.2:+59665536 | MS.gene40806:CDS |
AGAGCAGGAATTAGCACTGA+AGG | 0.580502 | 1.2:-59666822 | None:intergenic |
AGAACAAGATCACGACATCT+GGG | 0.580552 | 1.2:-59665859 | None:intergenic |
TGGAGATGATTTGCAAACTC+AGG | 0.581537 | 1.2:+59666869 | MS.gene40806:CDS |
AAAGAACAAACCTGCAACTG+CGG | 0.583325 | 1.2:-59664883 | None:intergenic |
CCATGGTGTCTTCACGGCGA+CGG | 0.585962 | 1.2:-59664270 | None:intergenic |
GAATTAGCACTGAAGGAGAT+GGG | 0.587950 | 1.2:-59666815 | None:intergenic |
ATTGAGGAGGTTATACAGAC+TGG | 0.591254 | 1.2:+59664817 | MS.gene40806:CDS |
AATCCACCCGAAGGCACAGA+AGG | 0.592098 | 1.2:-59668543 | None:intergenic |
GCACTATCATATCTTTCTGA+TGG | 0.593235 | 1.2:+59666610 | MS.gene40806:CDS |
TCTCAATCAGGATTCAACTT+CGG | 0.600258 | 1.2:+59668507 | MS.gene40806:CDS |
GAAGACGAGACTATGCCTCC+AGG | 0.602017 | 1.2:+59668477 | MS.gene40806:CDS |
ACGTTAGAGTGAAGAGCGGA+AGG | 0.610168 | 1.2:-59664367 | None:intergenic |
CAACTATGGTTGCTGGTGTG+TGG | 0.615148 | 1.2:+59664619 | MS.gene40806:CDS |
ATTCAACTTCGGTAGTGCTG+AGG | 0.616870 | 1.2:+59668518 | MS.gene40806:CDS |
CTGTGTTGTCATGACTCTGG+AGG | 0.617202 | 1.2:-59668404 | None:intergenic |
ACTAAGGTGGTAATTGACCA+TGG | 0.617924 | 1.2:+59665552 | MS.gene40806:CDS |
TGATCTTGTTCTCGGTCACG+GGG | 0.618284 | 1.2:+59665870 | MS.gene40806:CDS |
TTATAAGAAAAGCATCAAGA+AGG | 0.621627 | 1.2:+59667793 | MS.gene40806:CDS |
CAACCTTGTATCGGTTGCGA+CGG | 0.622441 | 1.2:-59664225 | None:intergenic |
TATTTAACAGGCTGTGATCG+AGG | 0.629779 | 1.2:+59667962 | MS.gene40806:intron |
CCATATCAAACATTACAGCT+GGG | 0.630827 | 1.2:+59667828 | MS.gene40806:CDS |
ACACTTTCAAACTTCTGCAG+GGG | 0.631402 | 1.2:+59665961 | MS.gene40806:CDS |
TGGTGTCTTCACGGCGACGG+CGG | 0.632012 | 1.2:-59664267 | None:intergenic |
TGTATAACCTCCTCAATCGG+TGG | 0.634105 | 1.2:-59664811 | None:intergenic |
ATAGGTTATCATCAATCATG+AGG | 0.634624 | 1.2:+59667736 | MS.gene40806:intron |
CATCGTCACTAGAAGAAGCA+AGG | 0.638488 | 1.2:-59665599 | None:intergenic |
ACAGGTACCTAGTAAGTCAA+GGG | 0.638546 | 1.2:+59668199 | MS.gene40806:intron |
CCAGATGATTGATGATGCTG+AGG | 0.638583 | 1.2:+59668362 | MS.gene40806:CDS |
AACATCTGAAAACACTAAGG+TGG | 0.654726 | 1.2:+59665539 | MS.gene40806:CDS |
CAGATGATTGATGATGCTGA+GGG | 0.661033 | 1.2:+59668363 | MS.gene40806:CDS |
GTCAACAGATTATATAGACA+AGG | 0.667483 | 1.2:-59667764 | None:intergenic |
CCGTCGCCGTGAAGACACCA+TGG | 0.674855 | 1.2:+59664270 | MS.gene40806:CDS |
AATAGAAGCTCAACAAGTCG+GGG | 0.676710 | 1.2:-59666676 | None:intergenic |
ACGTACTCCACCGATTGAGG+AGG | 0.680395 | 1.2:+59664804 | MS.gene40806:CDS |
ACAGATAAGAAGATCACACA+AGG | 0.680401 | 1.2:-59668232 | None:intergenic |
AGAGCGGAAGGAATCTGCTG+AGG | 0.690264 | 1.2:-59664355 | None:intergenic |
GATTGAGAAGCATCGCCTGG+AGG | 0.697893 | 1.2:-59668492 | None:intergenic |
ATTCTTACGGATCTCAACCA+TGG | 0.707053 | 1.2:-59664287 | None:intergenic |
TAAGGTGGTAATTGACCATG+GGG | 0.708388 | 1.2:+59665554 | MS.gene40806:CDS |
AAACGCAAACTCCAGGACCG+AGG | 0.710372 | 1.2:+59664201 | MS.gene40806:CDS |
TTGAAGTTAAATCCACCCGA+AGG | 0.711716 | 1.2:-59668552 | None:intergenic |
AACGACGTTAGAGTGAAGAG+CGG | 0.743526 | 1.2:-59664371 | None:intergenic |
AGATGATTGATGATGCTGAG+GGG | 0.754975 | 1.2:+59668364 | MS.gene40806:CDS |
CAGATAAGAAGATCACACAA+GGG | 0.772619 | 1.2:-59668231 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAATAAAAAAAAAA+AGG | - | chr1.2:59666756-59666775 | None:intergenic | 0.0% |
!! | ATTAATGAAGTAATTAATTT+AGG | + | chr1.2:59664747-59664766 | MS.gene40806:intron | 10.0% |
!! | CTTCTTAAAAAAAAAAAAAA+AGG | + | chr1.2:59667301-59667320 | MS.gene40806:intron | 10.0% |
!!! | AAGTTTAAAATTCAAAAAAT+AGG | - | chr1.2:59665194-59665213 | None:intergenic | 10.0% |
!!! | ATTTTTTATTTATTATCTGT+TGG | + | chr1.2:59666393-59666412 | MS.gene40806:intron | 10.0% |
!! | TAAAATTCAAAAAATAGGTT+TGG | - | chr1.2:59665189-59665208 | None:intergenic | 15.0% |
!! | TAAATAAAAAATTGTACTAG+TGG | - | chr1.2:59666385-59666404 | None:intergenic | 15.0% |
!!! | AACAAAAAGTTTTTTTTCAA+CGG | - | chr1.2:59667416-59667435 | None:intergenic | 15.0% |
!!! | TACATTCTACTATTTTTTAT+AGG | + | chr1.2:59666513-59666532 | MS.gene40806:intron | 15.0% |
!!! | TTTTTAGATTTGTTTGAATT+AGG | + | chr1.2:59664530-59664549 | MS.gene40806:intron | 15.0% |
!! | AAAGTGATTTAGGAATAATA+AGG | - | chr1.2:59664434-59664453 | None:intergenic | 20.0% |
!! | AATTTCTATTGTTTGTTTGT+TGG | + | chr1.2:59667691-59667710 | MS.gene40806:intron | 20.0% |
!! | ATAAAAGAAATACTGTTAAC+AGG | + | chr1.2:59667027-59667046 | MS.gene40806:intron | 20.0% |
!! | ATGTAATACTCTAATCTATA+GGG | - | chr1.2:59666249-59666268 | None:intergenic | 20.0% |
!! | CTAATTTCCTAATATTTAAC+AGG | + | chr1.2:59667950-59667969 | MS.gene40806:intron | 20.0% |
!! | CTGTTAAATATTAGGAAATT+AGG | - | chr1.2:59667952-59667971 | None:intergenic | 20.0% |
!! | GATAAAAATATAGGCAATAA+TGG | + | chr1.2:59668321-59668340 | MS.gene40806:CDS | 20.0% |
!! | TAAAAGAAATACTGTTAACA+GGG | + | chr1.2:59667028-59667047 | MS.gene40806:intron | 20.0% |
!! | TATGTAATACTCTAATCTAT+AGG | - | chr1.2:59666250-59666269 | None:intergenic | 20.0% |
!! | TTTATCCACAAAAAAAAGAA+AGG | - | chr1.2:59667012-59667031 | None:intergenic | 20.0% |
!!! | GATGCTTTTCTTATAATTAT+TGG | - | chr1.2:59667789-59667808 | None:intergenic | 20.0% |
!!! | TACAGGAATTTTACAAAATT+CGG | - | chr1.2:59665401-59665420 | None:intergenic | 20.0% |
!!! | TATTTTTATACCTGATCAAA+AGG | - | chr1.2:59666000-59666019 | None:intergenic | 20.0% |
!!! | TTTTCAAGAAAAGATATCAT+GGG | - | chr1.2:59665770-59665789 | None:intergenic | 20.0% |
! | AAAAGAAATACTGTTAACAG+GGG | + | chr1.2:59667029-59667048 | MS.gene40806:intron | 25.0% |
! | ATAACCATAAATTTCACTTG+CGG | - | chr1.2:59665123-59665142 | None:intergenic | 25.0% |
! | ATAATATTATTAACCCTCCA+GGG | - | chr1.2:59668129-59668148 | None:intergenic | 25.0% |
! | ATCTTATGGATAACATTGTT+TGG | + | chr1.2:59666293-59666312 | MS.gene40806:intron | 25.0% |
! | CAAAAAATATTCAGAAGATC+TGG | - | chr1.2:59667582-59667601 | None:intergenic | 25.0% |
! | GATCCAAAAATACAACATAA+TGG | - | chr1.2:59666492-59666511 | None:intergenic | 25.0% |
! | TAAATCAAATATTGAGCAGA+TGG | - | chr1.2:59666448-59666467 | None:intergenic | 25.0% |
! | TGTCAAACCTTTCTTTAAAT+TGG | + | chr1.2:59667513-59667532 | MS.gene40806:intron | 25.0% |
! | TTAAAGAAAGGTTTGACATA+TGG | - | chr1.2:59667511-59667530 | None:intergenic | 25.0% |
!! | ACAGGAATTTTACAAAATTC+GGG | - | chr1.2:59665400-59665419 | None:intergenic | 25.0% |
!! | AGATTTGTTTGAATTAGGTT+AGG | + | chr1.2:59664535-59664554 | MS.gene40806:intron | 25.0% |
!! | GATTTGTTTGAATTAGGTTA+GGG | + | chr1.2:59664536-59664555 | MS.gene40806:intron | 25.0% |
!!! | CAGATCTTCTGAATATTTTT+TGG | + | chr1.2:59667580-59667599 | MS.gene40806:intron | 25.0% |
!!! | CTTTAAAATGCAGAAACTTT+GGG | + | chr1.2:59665668-59665687 | MS.gene40806:intron | 25.0% |
!!! | GTTTTCAAGAAAAGATATCA+TGG | - | chr1.2:59665771-59665790 | None:intergenic | 25.0% |
!!! | TTATAAGAAAAGCATCAAGA+AGG | + | chr1.2:59667793-59667812 | MS.gene40806:CDS | 25.0% |
AAAAAAAGGCTTAGAGTGAT+AGG | + | chr1.2:59667315-59667334 | MS.gene40806:intron | 30.0% | |
AAAAAAGGCTTAGAGTGATA+GGG | + | chr1.2:59667316-59667335 | MS.gene40806:intron | 30.0% | |
AAGTCAAATATACCTGTTCA+CGG | - | chr1.2:59665626-59665645 | None:intergenic | 30.0% | |
AATCAAATAACTTAGTCCTG+TGG | + | chr1.2:59666040-59666059 | MS.gene40806:intron | 30.0% | |
ACAGAATACTTCTGATCTTA+TGG | + | chr1.2:59666279-59666298 | MS.gene40806:intron | 30.0% | |
ATAGGTTATCATCAATCATG+AGG | + | chr1.2:59667736-59667755 | MS.gene40806:intron | 30.0% | |
ATCACAGCCTGTTAAATATT+AGG | - | chr1.2:59667960-59667979 | None:intergenic | 30.0% | |
ATTTCATACACACACAAAAG+AGG | - | chr1.2:59665737-59665756 | None:intergenic | 30.0% | |
CAACACAGAGATTTATGAAA+AGG | + | chr1.2:59668419-59668438 | MS.gene40806:CDS | 30.0% | |
CAATAATGCAAAGAAAGGTT+TGG | - | chr1.2:59667482-59667501 | None:intergenic | 30.0% | |
CACAAAAAAAAGAAAGGCAA+AGG | - | chr1.2:59667006-59667025 | None:intergenic | 30.0% | |
CATAATATTATTAACCCTCC+AGG | - | chr1.2:59668130-59668149 | None:intergenic | 30.0% | |
CCTCAATCCAATTTAAAGAA+AGG | - | chr1.2:59667523-59667542 | None:intergenic | 30.0% | |
CCTTTCTTTAAATTGGATTG+AGG | + | chr1.2:59667520-59667539 | MS.gene40806:intron | 30.0% | |
CTGGAGGGTTAATAATATTA+TGG | + | chr1.2:59668128-59668147 | MS.gene40806:intron | 30.0% | |
CTTATCGAGTCAAAAGAATA+TGG | + | chr1.2:59666216-59666235 | MS.gene40806:intron | 30.0% | |
GAAATTGCAAAGTATGCAAT+TGG | + | chr1.2:59666354-59666373 | MS.gene40806:intron | 30.0% | |
GCACATTAACTACTAACATA+AGG | + | chr1.2:59667162-59667181 | MS.gene40806:intron | 30.0% | |
GTCAACAGATTATATAGACA+AGG | - | chr1.2:59667767-59667786 | None:intergenic | 30.0% | |
TACGTAACACTATCTAGTAT+GGG | - | chr1.2:59665008-59665027 | None:intergenic | 30.0% | |
TCAAGCAATAATGCAAAGAA+AGG | - | chr1.2:59667487-59667506 | None:intergenic | 30.0% | |
TCAAGCAATGACATTGAAAT+AGG | - | chr1.2:59667451-59667470 | None:intergenic | 30.0% | |
TGAGTTTGATATCAAGAAAG+AGG | + | chr1.2:59668025-59668044 | MS.gene40806:CDS | 30.0% | |
TTCGTAACAAATAAAACCAC+AGG | - | chr1.2:59666974-59666993 | None:intergenic | 30.0% | |
! | AATTTTACAAAATTCGGGGT+GGG | - | chr1.2:59665395-59665414 | None:intergenic | 30.0% |
! | AGCTTTGATCAAAGTGATTT+AGG | - | chr1.2:59664444-59664463 | None:intergenic | 30.0% |
! | ATGATTGATGATAACCTATG+GGG | - | chr1.2:59667735-59667754 | None:intergenic | 30.0% |
! | ATGCATTTTCAATATTTCCC+TGG | + | chr1.2:59668109-59668128 | MS.gene40806:intron | 30.0% |
! | ATTTTCAATATTTCCCTGGA+GGG | + | chr1.2:59668113-59668132 | MS.gene40806:intron | 30.0% |
! | CAGGAATTTTACAAAATTCG+GGG | - | chr1.2:59665399-59665418 | None:intergenic | 30.0% |
! | CATGATTGATGATAACCTAT+GGG | - | chr1.2:59667736-59667755 | None:intergenic | 30.0% |
! | CCAAAGTTTCTGCATTTTAA+AGG | - | chr1.2:59665670-59665689 | None:intergenic | 30.0% |
! | CTGCCATTATGTTGTATTTT+TGG | + | chr1.2:59666486-59666505 | MS.gene40806:intron | 30.0% |
! | GATTGACTTTGATATTTGTG+TGG | + | chr1.2:59664777-59664796 | MS.gene40806:intron | 30.0% |
! | GTAATATTTTACCTTGTCAG+AGG | - | chr1.2:59666106-59666125 | None:intergenic | 30.0% |
! | TCATGATTGATGATAACCTA+TGG | - | chr1.2:59667737-59667756 | None:intergenic | 30.0% |
! | TTTTATACCTGATCAAAAGG+AGG | - | chr1.2:59665997-59666016 | None:intergenic | 30.0% |
! | TTTTGTTGAGTTTCTGATGA+GGG | + | chr1.2:59664852-59664871 | MS.gene40806:CDS | 30.0% |
!! | CCTTTAAAATGCAGAAACTT+TGG | + | chr1.2:59665667-59665686 | MS.gene40806:intron | 30.0% |
!!! | CTTTGCCTTTCTTTTTTTTG+TGG | + | chr1.2:59667004-59667023 | MS.gene40806:intron | 30.0% |
!!! | TATTCAAATACCGATTTTCC+TGG | + | chr1.2:59667544-59667563 | MS.gene40806:intron | 30.0% |
!!! | TTAACTGTTACTTTTCTGTC+TGG | + | chr1.2:59666071-59666090 | MS.gene40806:intron | 30.0% |
!!! | TTCTGTGATTTTTGTTTTGC+AGG | + | chr1.2:59665801-59665820 | MS.gene40806:intron | 30.0% |
AAAGCTGCTATCAATTGGTT+AGG | + | chr1.2:59664686-59664705 | MS.gene40806:intron | 35.0% | |
AACAGCTAGATGAAATCGAA+GGG | + | chr1.2:59666161-59666180 | MS.gene40806:intron | 35.0% | |
AACATCTGAAAACACTAAGG+TGG | + | chr1.2:59665539-59665558 | MS.gene40806:CDS | 35.0% | |
ACAATAGAAGCTCAACAAGT+CGG | - | chr1.2:59666681-59666700 | None:intergenic | 35.0% | |
ACAGATAAGAAGATCACACA+AGG | - | chr1.2:59668235-59668254 | None:intergenic | 35.0% | |
ACAGTTAAGAAAAATGCCAC+AGG | - | chr1.2:59666059-59666078 | None:intergenic | 35.0% | |
ACATAAGGCTTAGAGTGATA+TGG | + | chr1.2:59667086-59667105 | MS.gene40806:intron | 35.0% | |
ACCATATCAAACATTACAGC+TGG | + | chr1.2:59667827-59667846 | MS.gene40806:CDS | 35.0% | |
AGTACCTCACATCTCAAATT+TGG | + | chr1.2:59666702-59666721 | MS.gene40806:intron | 35.0% | |
AGTTAATGTGCTCTGTTAGT+GGG | - | chr1.2:59667153-59667172 | None:intergenic | 35.0% | |
ATCTCACAATCCAGGAAAAT+CGG | - | chr1.2:59667557-59667576 | None:intergenic | 35.0% | |
ATTCAAGCTGTAATTGAAGC+TGG | + | chr1.2:59666646-59666665 | MS.gene40806:CDS | 35.0% | |
ATTTCTCAGCATAGAAAGCT+TGG | - | chr1.2:59665932-59665951 | None:intergenic | 35.0% | |
CAAGGAGCTTCACAAAAATT+GGG | - | chr1.2:59665584-59665603 | None:intergenic | 35.0% | |
CAGATAAGAAGATCACACAA+GGG | - | chr1.2:59668234-59668253 | None:intergenic | 35.0% | |
CCATATCAAACATTACAGCT+GGG | + | chr1.2:59667828-59667847 | MS.gene40806:CDS | 35.0% | |
CTTGAAAACATCTTGAAGGT+TGG | + | chr1.2:59668291-59668310 | MS.gene40806:CDS | 35.0% | |
GAAACCATAAATTTCACTCG+CGG | - | chr1.2:59665089-59665108 | None:intergenic | 35.0% | |
GCACTATCATATCTTTCTGA+TGG | + | chr1.2:59666610-59666629 | MS.gene40806:CDS | 35.0% | |
GGAGAAGCGGATAAAAATAT+AGG | + | chr1.2:59668312-59668331 | MS.gene40806:CDS | 35.0% | |
GTACGTAACACTATCTAGTA+TGG | - | chr1.2:59665009-59665028 | None:intergenic | 35.0% | |
TAACAGCTAGATGAAATCGA+AGG | + | chr1.2:59666160-59666179 | MS.gene40806:intron | 35.0% | |
TAATACACCCTTGACTTACT+AGG | - | chr1.2:59668209-59668228 | None:intergenic | 35.0% | |
TACTGTTAACAGGGGTTATA+AGG | + | chr1.2:59667037-59667056 | MS.gene40806:intron | 35.0% | |
TAGAGTGATATGGAGGTAAT+GGG | + | chr1.2:59667096-59667115 | MS.gene40806:intron | 35.0% | |
TAGTTAATGTGCTCTGTTAG+TGG | - | chr1.2:59667154-59667173 | None:intergenic | 35.0% | |
TCATTCAATTGTGCCAAAAG+AGG | - | chr1.2:59665904-59665923 | None:intergenic | 35.0% | |
TCTCAATCAGGATTCAACTT+CGG | + | chr1.2:59668507-59668526 | MS.gene40806:CDS | 35.0% | |
TGAAGATTCTTGAGACATAC+TGG | + | chr1.2:59668445-59668464 | MS.gene40806:CDS | 35.0% | |
TGAATGTTCTACTCTTGTTC+AGG | + | chr1.2:59666790-59666809 | MS.gene40806:intron | 35.0% | |
TGGAACATCTGAAAACACTA+AGG | + | chr1.2:59665536-59665555 | MS.gene40806:CDS | 35.0% | |
TGTATCAGCAACATCAAACA+TGG | - | chr1.2:59665450-59665469 | None:intergenic | 35.0% | |
TTAGAGTGATATGGAGGTAA+TGG | + | chr1.2:59667095-59667114 | MS.gene40806:intron | 35.0% | |
TTTACACGTATGATGCTTGT+CGG | + | chr1.2:59665038-59665057 | MS.gene40806:intron | 35.0% | |
TTTCGAAAGCTGCTATCAAT+TGG | + | chr1.2:59664681-59664700 | MS.gene40806:CDS | 35.0% | |
! | CAACCTTCAAGATGTTTTCA+AGG | - | chr1.2:59668293-59668312 | None:intergenic | 35.0% |
! | CATTTTCAATATTTCCCTGG+AGG | + | chr1.2:59668112-59668131 | MS.gene40806:intron | 35.0% |
! | GAATTTTACAAAATTCGGGG+TGG | - | chr1.2:59665396-59665415 | None:intergenic | 35.0% |
! | GTTGAGTGTGATTTGTAAGT+GGG | - | chr1.2:59667129-59667148 | None:intergenic | 35.0% |
! | TTCTATGTTGTTGTTGCAGT+TGG | + | chr1.2:59664587-59664606 | MS.gene40806:intron | 35.0% |
! | TTTTCAACGGCAAATGTTAG+TGG | - | chr1.2:59667403-59667422 | None:intergenic | 35.0% |
!! | AAGGTGTATGAGTTGGTTTA+GGG | + | chr1.2:59667056-59667075 | MS.gene40806:intron | 35.0% |
!! | ATCTCAGTAGAAACTTGTTG+AGG | - | chr1.2:59667616-59667635 | None:intergenic | 35.0% |
!! | GTTTTGTTGAGTTTCTGATG+AGG | + | chr1.2:59664851-59664870 | MS.gene40806:CDS | 35.0% |
!! | TAAGGTGTATGAGTTGGTTT+AGG | + | chr1.2:59667055-59667074 | MS.gene40806:intron | 35.0% |
!! | TGCATTTTAAAGGCAGATGA+AGG | - | chr1.2:59665660-59665679 | None:intergenic | 35.0% |
!! | TTTGTTTGTTGGTTTGAACC+TGG | + | chr1.2:59667702-59667721 | MS.gene40806:intron | 35.0% |
AAAGAACAAACCTGCAACTG+CGG | - | chr1.2:59664886-59664905 | None:intergenic | 40.0% | |
AACTGTCACAATCCTAGGAT+CGG | - | chr1.2:59668259-59668278 | None:intergenic | 40.0% | |
AATAGAAGCTCAACAAGTCG+GGG | - | chr1.2:59666679-59666698 | None:intergenic | 40.0% | |
ACAACAACATGAGATACTCC+TGG | - | chr1.2:59666904-59666923 | None:intergenic | 40.0% | |
ACACTTTCAAACTTCTGCAG+GGG | + | chr1.2:59665961-59665980 | MS.gene40806:CDS | 40.0% | |
ACAGCTAGATGAAATCGAAG+GGG | + | chr1.2:59666162-59666181 | MS.gene40806:intron | 40.0% | |
ACAGGTACCTAGTAAGTCAA+GGG | + | chr1.2:59668199-59668218 | MS.gene40806:intron | 40.0% | |
ACATGGATGCATACTTGCAT+AGG | - | chr1.2:59665433-59665452 | None:intergenic | 40.0% | |
ACTAAGGTGGTAATTGACCA+TGG | + | chr1.2:59665552-59665571 | MS.gene40806:CDS | 40.0% | |
ACTGTTGGAAACATTGTCAC+TGG | + | chr1.2:59666849-59666868 | MS.gene40806:CDS | 40.0% | |
AGAACAAGATCACGACATCT+GGG | - | chr1.2:59665862-59665881 | None:intergenic | 40.0% | |
AGACAAACTGTCACAATCCT+AGG | - | chr1.2:59668264-59668283 | None:intergenic | 40.0% | |
AGATGTCGTGATCTTGTTCT+CGG | + | chr1.2:59665862-59665881 | MS.gene40806:CDS | 40.0% | |
AGGCCTTGAAAACATCTTGA+AGG | + | chr1.2:59668287-59668306 | MS.gene40806:CDS | 40.0% | |
ATATCAAGAAAGAGGCTGCT+TGG | + | chr1.2:59668033-59668052 | MS.gene40806:CDS | 40.0% | |
ATCTCAAATGCTACATCTGG+TGG | + | chr1.2:59668059-59668078 | MS.gene40806:CDS | 40.0% | |
ATTCTTACGGATCTCAACCA+TGG | - | chr1.2:59664290-59664309 | None:intergenic | 40.0% | |
ATTGAGGAGGTTATACAGAC+TGG | + | chr1.2:59664817-59664836 | MS.gene40806:CDS | 40.0% | |
ATTGTGACAGTTTGTCTGGA+AGG | + | chr1.2:59668267-59668286 | MS.gene40806:CDS | 40.0% | |
CAATAGAAGCTCAACAAGTC+GGG | - | chr1.2:59666680-59666699 | None:intergenic | 40.0% | |
CACCAGAGGACCAAATATAT+TGG | - | chr1.2:59667988-59668007 | None:intergenic | 40.0% | |
CCCAGCTGTAATGTTTGATA+TGG | - | chr1.2:59667831-59667850 | None:intergenic | 40.0% | |
CTAAGGTGGTAATTGACCAT+GGG | + | chr1.2:59665553-59665572 | MS.gene40806:CDS | 40.0% | |
CTAGATAGTGTTACGTACCA+TGG | + | chr1.2:59665011-59665030 | MS.gene40806:intron | 40.0% | |
CTCAGCATCATCAATCATCT+GGG | - | chr1.2:59668364-59668383 | None:intergenic | 40.0% | |
GAATCGAACTTGAAACCTTG+AGG | - | chr1.2:59667250-59667269 | None:intergenic | 40.0% | |
GACAAGCATCATACGTGTAA+AGG | - | chr1.2:59665039-59665058 | None:intergenic | 40.0% | |
GACACTTTCAAACTTCTGCA+GGG | + | chr1.2:59665960-59665979 | MS.gene40806:CDS | 40.0% | |
GATGCATACTTGCATAGGTA+TGG | - | chr1.2:59665428-59665447 | None:intergenic | 40.0% | |
GATTCTTGAGACATACTGGT+TGG | + | chr1.2:59668449-59668468 | MS.gene40806:CDS | 40.0% | |
GCAAGGAGCTTCACAAAAAT+TGG | - | chr1.2:59665585-59665604 | None:intergenic | 40.0% | |
GCTATCTCAAATGCTACATC+TGG | + | chr1.2:59668056-59668075 | MS.gene40806:CDS | 40.0% | |
GCTTTGACAAACATAGCTTC+TGG | + | chr1.2:59665516-59665535 | MS.gene40806:CDS | 40.0% | |
GGAAAATCACTGAGATCGAA+AGG | - | chr1.2:59666953-59666972 | None:intergenic | 40.0% | |
GGGTTATAAGGTGTATGAGT+TGG | + | chr1.2:59667049-59667068 | MS.gene40806:intron | 40.0% | |
GTCTGTATAACCTCCTCAAT+CGG | - | chr1.2:59664817-59664836 | None:intergenic | 40.0% | |
GTGATCGAGGCCAATATATT+TGG | + | chr1.2:59667975-59667994 | MS.gene40806:CDS | 40.0% | |
GTTAATGTGCTCTGTTAGTG+GGG | - | chr1.2:59667152-59667171 | None:intergenic | 40.0% | |
GTTGGAACATTTGCCAACTA+TGG | + | chr1.2:59664605-59664624 | MS.gene40806:intron | 40.0% | |
GTTGTGTATGTGAACCTGAA+GGG | + | chr1.2:59666415-59666434 | MS.gene40806:intron | 40.0% | |
TAAGGCTTAGAGTGATATGG+AGG | + | chr1.2:59667089-59667108 | MS.gene40806:intron | 40.0% | |
TAAGGTGGTAATTGACCATG+GGG | + | chr1.2:59665554-59665573 | MS.gene40806:CDS | 40.0% | |
TACTAGGTACCTGTCAAACA+TGG | - | chr1.2:59668193-59668212 | None:intergenic | 40.0% | |
TAGGATTGTGACAGTTTGTC+TGG | + | chr1.2:59668263-59668282 | MS.gene40806:CDS | 40.0% | |
TATCAAGAAAGAGGCTGCTT+GGG | + | chr1.2:59668034-59668053 | MS.gene40806:CDS | 40.0% | |
TATTTAACAGGCTGTGATCG+AGG | + | chr1.2:59667962-59667981 | MS.gene40806:intron | 40.0% | |
TCTCTTCACGACGATTCTTA+CGG | - | chr1.2:59664303-59664322 | None:intergenic | 40.0% | |
TCTGCCGCAAGTGAAATTTA+TGG | + | chr1.2:59665116-59665135 | MS.gene40806:intron | 40.0% | |
TGGGAATAAACAGCAGATTC+AGG | + | chr1.2:59667847-59667866 | MS.gene40806:CDS | 40.0% | |
TTAATGTGCTCTGTTAGTGG+GGG | - | chr1.2:59667151-59667170 | None:intergenic | 40.0% | |
TTGAAGTTAAATCCACCCGA+AGG | - | chr1.2:59668555-59668574 | None:intergenic | 40.0% | |
TTTCATCTAGCTGTTACAGC+AGG | - | chr1.2:59666156-59666175 | None:intergenic | 40.0% | |
! | ACAGCCAAATTTGAGATGTG+AGG | - | chr1.2:59666709-59666728 | None:intergenic | 40.0% |
! | GAATTAGCACTGAAGGAGAT+GGG | - | chr1.2:59666818-59666837 | None:intergenic | 40.0% |
! | GCAGAAACTTTGGGAAACTA+AGG | + | chr1.2:59665677-59665696 | MS.gene40806:intron | 40.0% |
! | GGTTGAGTGTGATTTGTAAG+TGG | - | chr1.2:59667130-59667149 | None:intergenic | 40.0% |
! | TGGAGATGATTTGCAAACTC+AGG | + | chr1.2:59666869-59666888 | MS.gene40806:CDS | 40.0% |
!! | AGATGATTGATGATGCTGAG+GGG | + | chr1.2:59668364-59668383 | MS.gene40806:CDS | 40.0% |
!! | AGGTGTATGAGTTGGTTTAG+GGG | + | chr1.2:59667057-59667076 | MS.gene40806:intron | 40.0% |
!! | CAGATGATTGATGATGCTGA+GGG | + | chr1.2:59668363-59668382 | MS.gene40806:CDS | 40.0% |
!! | TCATACGTGTAAAGGTACCA+TGG | - | chr1.2:59665031-59665050 | None:intergenic | 40.0% |
!!! | TTTTGTTTTGCAGGCTGTGT+GGG | + | chr1.2:59665810-59665829 | MS.gene40806:intron | 40.0% |
!!! | TTTTTGTTTTGCAGGCTGTG+TGG | + | chr1.2:59665809-59665828 | MS.gene40806:intron | 40.0% |
AAAGGCTTAGAGTGATAGGG+AGG | + | chr1.2:59667319-59667338 | MS.gene40806:intron | 45.0% | |
AACGACGTTAGAGTGAAGAG+CGG | - | chr1.2:59664374-59664393 | None:intergenic | 45.0% | |
AAGGCTTAGAGTAACCCTCT+TGG | + | chr1.2:59667181-59667200 | MS.gene40806:intron | 45.0% | |
ACAACATGAGATACTCCTGG+TGG | - | chr1.2:59666901-59666920 | None:intergenic | 45.0% | |
ACTGTCACAATCCTAGGATC+GGG | - | chr1.2:59668258-59668277 | None:intergenic | 45.0% | |
AGCTATGTTTGTCAAAGCCC+AGG | - | chr1.2:59665514-59665533 | None:intergenic | 45.0% | |
AGGCTTAGAGTAACCCTCTT+GGG | + | chr1.2:59667182-59667201 | MS.gene40806:intron | 45.0% | |
ATCTGGTCATCTCACAATCC+AGG | - | chr1.2:59667565-59667584 | None:intergenic | 45.0% | |
ATTCAACTTCGGTAGTGCTG+AGG | + | chr1.2:59668518-59668537 | MS.gene40806:CDS | 45.0% | |
ATTCCTGCTCTTCGTACTGT+TGG | + | chr1.2:59666834-59666853 | MS.gene40806:CDS | 45.0% | |
CAGCTAGATGAAATCGAAGG+GGG | + | chr1.2:59666163-59666182 | MS.gene40806:intron | 45.0% | |
CATACTTGCATAGGTATGGC+GGG | - | chr1.2:59665424-59665443 | None:intergenic | 45.0% | |
CATCGTCACTAGAAGAAGCA+AGG | - | chr1.2:59665602-59665621 | None:intergenic | 45.0% | |
CATCTTGAAGGTTGGAGAAG+CGG | + | chr1.2:59668299-59668318 | MS.gene40806:CDS | 45.0% | |
CATTTGCCAACTATGGTTGC+TGG | + | chr1.2:59664612-59664631 | MS.gene40806:CDS | 45.0% | |
CCTCAGCATCATCAATCATC+TGG | - | chr1.2:59668365-59668384 | None:intergenic | 45.0% | |
CTAACTTAGCCCACCCAAAT+TGG | - | chr1.2:59667281-59667300 | None:intergenic | 45.0% | |
CTATGCTGAGAAATGCTACC+TGG | + | chr1.2:59665938-59665957 | MS.gene40806:CDS | 45.0% | |
CTCTAACGTCGTTGAGAAGA+AGG | + | chr1.2:59664381-59664400 | MS.gene40806:CDS | 45.0% | |
GACAGGTACCTAGTAAGTCA+AGG | + | chr1.2:59668198-59668217 | MS.gene40806:intron | 45.0% | |
GAGAACAAGATCACGACATC+TGG | - | chr1.2:59665863-59665882 | None:intergenic | 45.0% | |
GCATACTTGCATAGGTATGG+CGG | - | chr1.2:59665425-59665444 | None:intergenic | 45.0% | |
GGACACTTTCAAACTTCTGC+AGG | + | chr1.2:59665959-59665978 | MS.gene40806:CDS | 45.0% | |
GGCCAATATATTTGGTCCTC+TGG | + | chr1.2:59667983-59668002 | MS.gene40806:CDS | 45.0% | |
GGTTAGTGTGCTCTGTTAGT+GGG | - | chr1.2:59667382-59667401 | None:intergenic | 45.0% | |
GGTTGTGTATGTGAACCTGA+AGG | + | chr1.2:59666414-59666433 | MS.gene40806:intron | 45.0% | |
GTACTGTGTGTTGCAGTTTG+AGG | + | chr1.2:59665485-59665504 | MS.gene40806:intron | 45.0% | |
GTTAGTGTGCTCTGTTAGTG+GGG | - | chr1.2:59667381-59667400 | None:intergenic | 45.0% | |
GTTTAGGGGGGAGAAACATA+AGG | + | chr1.2:59667071-59667090 | MS.gene40806:intron | 45.0% | |
TCGAACTTGAAACCTTGAGG+AGG | - | chr1.2:59667247-59667266 | None:intergenic | 45.0% | |
TCTCAACCATGGTGTCTTCA+CGG | - | chr1.2:59664279-59664298 | None:intergenic | 45.0% | |
TCTCTGTGTTGTCATGACTC+TGG | - | chr1.2:59668410-59668429 | None:intergenic | 45.0% | |
TCTGCCGCGAGTGAAATTTA+TGG | + | chr1.2:59665082-59665101 | MS.gene40806:intron | 45.0% | |
TGAATAAGACCAGCAAGAGC+AGG | - | chr1.2:59666553-59666572 | None:intergenic | 45.0% | |
TGATGATAACCTATGGGGCA+AGG | - | chr1.2:59667730-59667749 | None:intergenic | 45.0% | |
TGGGCATTAGGAAATGTTGC+TGG | + | chr1.2:59665829-59665848 | MS.gene40806:CDS | 45.0% | |
TGGTTAGTGTGCTCTGTTAG+TGG | - | chr1.2:59667383-59667402 | None:intergenic | 45.0% | |
TGTATAACCTCCTCAATCGG+TGG | - | chr1.2:59664814-59664833 | None:intergenic | 45.0% | |
TTAGAGTAACCCTCTTGGGT+TGG | + | chr1.2:59667186-59667205 | MS.gene40806:intron | 45.0% | |
TTAGAGTGATAGGGAGGTCA+TGG | + | chr1.2:59667325-59667344 | MS.gene40806:intron | 45.0% | |
TTCTTATCTGTCCCGATCCT+AGG | + | chr1.2:59668244-59668263 | MS.gene40806:CDS | 45.0% | |
TTGCTCAAAAAGAGACGCGA+AGG | + | chr1.2:59664325-59664344 | MS.gene40806:CDS | 45.0% | |
TTTCCAACAGTACGAAGAGC+AGG | - | chr1.2:59666840-59666859 | None:intergenic | 45.0% | |
! | AAGATATGATAGTGCCCAGC+AGG | - | chr1.2:59666605-59666624 | None:intergenic | 45.0% |
! | AGAGCAGGAATTAGCACTGA+AGG | - | chr1.2:59666825-59666844 | None:intergenic | 45.0% |
! | CGATCTCAGTGATTTTCCTG+TGG | + | chr1.2:59666955-59666974 | MS.gene40806:intron | 45.0% |
! | GGAATTAGCACTGAAGGAGA+TGG | - | chr1.2:59666819-59666838 | None:intergenic | 45.0% |
! | TCTTGAGACATACTGGTTGG+AGG | + | chr1.2:59668452-59668471 | MS.gene40806:CDS | 45.0% |
!! | AAACTCAGGTATTGACCACC+AGG | + | chr1.2:59666883-59666902 | MS.gene40806:intron | 45.0% |
!! | ATGGTATTGGCTTGGGATCT+GGG | + | chr1.2:59667213-59667232 | MS.gene40806:intron | 45.0% |
!! | CCAGATGATTGATGATGCTG+AGG | + | chr1.2:59668362-59668381 | MS.gene40806:CDS | 45.0% |
!! | GCAGAAGTTTGAAAGTGTCC+AGG | - | chr1.2:59665959-59665978 | None:intergenic | 45.0% |
!! | GGTGTATGAGTTGGTTTAGG+GGG | + | chr1.2:59667058-59667077 | MS.gene40806:intron | 45.0% |
!! | GTGTATGAGTTGGTTTAGGG+GGG | + | chr1.2:59667059-59667078 | MS.gene40806:intron | 45.0% |
!!! | TTTTGAAGCAGACTCACCAG+AGG | - | chr1.2:59668002-59668021 | None:intergenic | 45.0% |
!!! | ATTATTATTTTCTAAATATT+GGG | + | chr1.2:59665705-59665724 | MS.gene40806:intron | 5.0% |
!!! | TATTATTATTTTCTAAATAT+TGG | + | chr1.2:59665704-59665723 | MS.gene40806:intron | 5.0% |
AAGTCTTGACTGATGCCTGC+TGG | + | chr1.2:59666587-59666606 | MS.gene40806:CDS | 50.0% | |
ACCTGATCAAAAGGAGGCTG+TGG | - | chr1.2:59665991-59666010 | None:intergenic | 50.0% | |
ACGTTAGAGTGAAGAGCGGA+AGG | - | chr1.2:59664370-59664389 | None:intergenic | 50.0% | |
AGTCTTGACTGATGCCTGCT+GGG | + | chr1.2:59666588-59666607 | MS.gene40806:CDS | 50.0% | |
ATCGTCCAAACGCAAACTCC+AGG | + | chr1.2:59664194-59664213 | MS.gene40806:CDS | 50.0% | |
CAAAAATTGGGACAGCCCCA+TGG | - | chr1.2:59665572-59665591 | None:intergenic | 50.0% | |
CAACTATGGTTGCTGGTGTG+TGG | + | chr1.2:59664619-59664638 | MS.gene40806:CDS | 50.0% | |
CACACACCAGCAACCATAGT+TGG | - | chr1.2:59664621-59664640 | None:intergenic | 50.0% | |
CAGATGGATAACCACCCTTC+AGG | - | chr1.2:59666432-59666451 | None:intergenic | 50.0% | |
CATCGACGGCAACCTTGTAT+CGG | - | chr1.2:59664237-59664256 | None:intergenic | 50.0% | |
CGTGATCTTGTTCTCGGTCA+CGG | + | chr1.2:59665868-59665887 | MS.gene40806:CDS | 50.0% | |
CTGTGTTGTCATGACTCTGG+AGG | - | chr1.2:59668407-59668426 | None:intergenic | 50.0% | |
GATCCCAAGCCAATACCATC+AGG | - | chr1.2:59667212-59667231 | None:intergenic | 50.0% | |
GATTCCCCCAGTGCCAATTT+GGG | + | chr1.2:59667265-59667284 | MS.gene40806:intron | 50.0% | |
GCATCAAGAAGGAAGCTTGC+TGG | + | chr1.2:59667804-59667823 | MS.gene40806:CDS | 50.0% | |
GGTAATGCACTCCTCTGACA+AGG | + | chr1.2:59666092-59666111 | MS.gene40806:intron | 50.0% | |
GTGATCTTGTTCTCGGTCAC+GGG | + | chr1.2:59665869-59665888 | MS.gene40806:CDS | 50.0% | |
GTGTATGTGAACCTGAAGGG+TGG | + | chr1.2:59666418-59666437 | MS.gene40806:intron | 50.0% | |
TAGTGACGATGTCCGTGAAC+AGG | + | chr1.2:59665611-59665630 | MS.gene40806:CDS | 50.0% | |
TGAGGTTCCTTCTGTGCCTT+CGG | + | chr1.2:59668536-59668555 | MS.gene40806:CDS | 50.0% | |
TGATCTTGTTCTCGGTCACG+GGG | + | chr1.2:59665870-59665889 | MS.gene40806:CDS | 50.0% | |
! | AGAACGTACTCCACCGATTG+AGG | + | chr1.2:59664801-59664820 | MS.gene40806:intron | 50.0% |
!! | CAACCTTGTATCGGTTGCGA+CGG | - | chr1.2:59664228-59664247 | None:intergenic | 50.0% |
!! | GATGGTATTGGCTTGGGATC+TGG | + | chr1.2:59667212-59667231 | MS.gene40806:intron | 50.0% |
!! | GATTGATGATGCTGAGGGGT+TGG | + | chr1.2:59668368-59668387 | MS.gene40806:CDS | 50.0% |
!! | TGGCCTGATGGTATTGGCTT+GGG | + | chr1.2:59667206-59667225 | MS.gene40806:intron | 50.0% |
!! | TGGTATTGGCTTGGGATCTG+GGG | + | chr1.2:59667214-59667233 | MS.gene40806:intron | 50.0% |
!! | TTGGCCTGATGGTATTGGCT+TGG | + | chr1.2:59667205-59667224 | MS.gene40806:intron | 50.0% |
!! | TTGGGTTGGCCTGATGGTAT+TGG | + | chr1.2:59667200-59667219 | MS.gene40806:intron | 50.0% |
AAACGCAAACTCCAGGACCG+AGG | + | chr1.2:59664201-59664220 | MS.gene40806:CDS | 55.0% | |
ACCATCAGGCCAACCCAAGA+GGG | - | chr1.2:59667198-59667217 | None:intergenic | 55.0% | |
AGAGCGGAAGGAATCTGCTG+AGG | - | chr1.2:59664358-59664377 | None:intergenic | 55.0% | |
AGCCCACCCAAATTGGCACT+GGG | - | chr1.2:59667274-59667293 | None:intergenic | 55.0% | |
CCAGGCGATGCTTCTCAATC+AGG | + | chr1.2:59668495-59668514 | MS.gene40806:CDS | 55.0% | |
CGATTCCCCCAGTGCCAATT+TGG | + | chr1.2:59667264-59667283 | MS.gene40806:intron | 55.0% | |
GAAGACGAGACTATGCCTCC+AGG | + | chr1.2:59668477-59668496 | MS.gene40806:CDS | 55.0% | |
GAGGTTCCTTCTGTGCCTTC+GGG | + | chr1.2:59668537-59668556 | MS.gene40806:CDS | 55.0% | |
GGAAGACTTTCCGCAGTTGC+AGG | + | chr1.2:59664873-59664892 | MS.gene40806:CDS | 55.0% | |
TACCATCAGGCCAACCCAAG+AGG | - | chr1.2:59667199-59667218 | None:intergenic | 55.0% | |
TAGCCCACCCAAATTGGCAC+TGG | - | chr1.2:59667275-59667294 | None:intergenic | 55.0% | |
TCGGTCCTGGAGTTTGCGTT+TGG | - | chr1.2:59664202-59664221 | None:intergenic | 55.0% | |
TTGCAGGCTGTGTGGGCATT+AGG | + | chr1.2:59665817-59665836 | MS.gene40806:intron | 55.0% | |
! | AATCCACCCGAAGGCACAGA+AGG | - | chr1.2:59668546-59668565 | None:intergenic | 55.0% |
! | ACGTACTCCACCGATTGAGG+AGG | + | chr1.2:59664804-59664823 | MS.gene40806:CDS | 55.0% |
! | GCCACAGCCTCCTTTTGATC+AGG | + | chr1.2:59665987-59666006 | MS.gene40806:CDS | 55.0% |
! | GTTGCAGTTTGAGGCAGCCT+GGG | + | chr1.2:59665494-59665513 | MS.gene40806:intron | 55.0% |
! | TGTTGCAGTTTGAGGCAGCC+TGG | + | chr1.2:59665493-59665512 | MS.gene40806:intron | 55.0% |
!! | CCTGATTGAGAAGCATCGCC+TGG | - | chr1.2:59668498-59668517 | None:intergenic | 55.0% |
!! | CGGGGCTTTGGTTCCTCTTT+TGG | + | chr1.2:59665888-59665907 | MS.gene40806:CDS | 55.0% |
!! | GATTGAGAAGCATCGCCTGG+AGG | - | chr1.2:59668495-59668514 | None:intergenic | 55.0% |
!! | GGTATTGGCTTGGGATCTGG+GGG | + | chr1.2:59667215-59667234 | MS.gene40806:intron | 55.0% |
!! | TGCATAGGTATGGCGGGTAC+AGG | - | chr1.2:59665418-59665437 | None:intergenic | 55.0% |
AACCTGGTGCCTTGCCCCAT+AGG | + | chr1.2:59667718-59667737 | MS.gene40806:intron | 60.0% | |
CCATGGTGTCTTCACGGCGA+CGG | - | chr1.2:59664273-59664292 | None:intergenic | 60.0% | |
CCCCCAGTGCCAATTTGGGT+GGG | + | chr1.2:59667269-59667288 | MS.gene40806:intron | 60.0% | |
CCTGCACTTCCTGCTCTTGC+TGG | + | chr1.2:59666541-59666560 | MS.gene40806:CDS | 60.0% | |
GCCCACCCAAATTGGCACTG+GGG | - | chr1.2:59667273-59667292 | None:intergenic | 60.0% | |
GGTCCGTCGCAACCGATACA+AGG | + | chr1.2:59664222-59664241 | MS.gene40806:CDS | 60.0% | |
GTTCCTTCTGTGCCTTCGGG+TGG | + | chr1.2:59668540-59668559 | MS.gene40806:CDS | 60.0% | |
GTTGCCGTCGATGCCGAAGA+AGG | + | chr1.2:59664244-59664263 | MS.gene40806:CDS | 60.0% | |
TCCCCCAGTGCCAATTTGGG+TGG | + | chr1.2:59667268-59667287 | MS.gene40806:intron | 60.0% | |
TGTTCTCGGTCACGGGGCTT+TGG | + | chr1.2:59665876-59665895 | MS.gene40806:CDS | 60.0% | |
! | AACCTATGGGGCAAGGCACC+AGG | - | chr1.2:59667723-59667742 | None:intergenic | 60.0% |
! | CCAGCAAGAGCAGGAAGTGC+AGG | - | chr1.2:59666544-59666563 | None:intergenic | 60.0% |
! | CCCACCCAAATTGGCACTGG+GGG | - | chr1.2:59667272-59667291 | None:intergenic | 60.0% |
! | TGGGGGTATGCTCCTCCTCA+AGG | + | chr1.2:59667232-59667251 | MS.gene40806:intron | 60.0% |
!! | ACCCTCTTGGGTTGGCCTGA+TGG | + | chr1.2:59667194-59667213 | MS.gene40806:intron | 60.0% |
!! | GTATCGGTTGCGACGGACCT+CGG | - | chr1.2:59664221-59664240 | None:intergenic | 60.0% |
CCGTCGCCGTGAAGACACCA+TGG | + | chr1.2:59664270-59664289 | MS.gene40806:CDS | 65.0% | |
TGGTGTCTTCACGGCGACGG+CGG | - | chr1.2:59664270-59664289 | None:intergenic | 65.0% | |
! | GCGGCCTTCTTCGGCATCGA+CGG | - | chr1.2:59664251-59664270 | None:intergenic | 65.0% |
ACGGCGACGGCGGCCTTCTT+CGG | - | chr1.2:59664260-59664279 | None:intergenic | 70.0% | |
GTTGCGACGGACCTCGGTCC+TGG | - | chr1.2:59664215-59664234 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 59664187 | 59668581 | 59664187 | ID=MS.gene40806 |
chr1.2 | mRNA | 59664187 | 59668581 | 59664187 | ID=MS.gene40806.t1;Parent=MS.gene40806 |
chr1.2 | exon | 59664187 | 59664402 | 59664187 | ID=MS.gene40806.t1.exon1;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59664187 | 59664402 | 59664187 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59664606 | 59664702 | 59664606 | ID=MS.gene40806.t1.exon2;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59664606 | 59664702 | 59664606 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59664803 | 59664894 | 59664803 | ID=MS.gene40806.t1.exon3;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59664803 | 59664894 | 59664803 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59665501 | 59665632 | 59665501 | ID=MS.gene40806.t1.exon4;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59665501 | 59665632 | 59665501 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59665823 | 59666008 | 59665823 | ID=MS.gene40806.t1.exon5;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59665823 | 59666008 | 59665823 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59666535 | 59666698 | 59666535 | ID=MS.gene40806.t1.exon6;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59666535 | 59666698 | 59666535 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59666812 | 59666890 | 59666812 | ID=MS.gene40806.t1.exon7;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59666812 | 59666890 | 59666812 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59667740 | 59667868 | 59667740 | ID=MS.gene40806.t1.exon8;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59667740 | 59667868 | 59667740 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59667972 | 59668099 | 59667972 | ID=MS.gene40806.t1.exon9;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59667972 | 59668099 | 59667972 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
chr1.2 | exon | 59668203 | 59668581 | 59668203 | ID=MS.gene40806.t1.exon10;Parent=MS.gene40806.t1 |
chr1.2 | CDS | 59668203 | 59668581 | 59668203 | ID=cds.MS.gene40806.t1;Parent=MS.gene40806.t1 |
Gene Sequence |
Protein sequence |