Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41198.t1 | XP_003606657.1 | 97.8 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 1.00E-200 | 709.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41198.t1 | G7JUS4 | 97.8 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 7.3e-201 | 709.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene41198 | -0.821584 | 3.74E-53 | -1.69E-46 |
| MS.gene050284 | MS.gene41198 | 0.801233 | 9.92E-49 | -1.69E-46 |
| MS.gene050287 | MS.gene41198 | 0.827876 | 1.23E-54 | -1.69E-46 |
| MS.gene051190 | MS.gene41198 | -0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene41198 | -0.808366 | 3.21E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene41198 | -0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene41198 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene41198 | -0.825053 | 5.78E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene41198 | -0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene41198 | -0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene41198 | -0.809505 | 1.83E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene41198 | -0.8022 | 6.28E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene41198 | -0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene41198 | -0.811419 | 7.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41198.t1 | MTR_4g063570 | 97.765 | 358 | 8 | 0 | 1 | 358 | 1 | 358 | 0.0 | 724 |
| MS.gene41198.t1 | MTR_4g063570 | 96.241 | 266 | 5 | 1 | 1 | 266 | 1 | 261 | 0.0 | 517 |
| MS.gene41198.t1 | MTR_4g063570 | 96.241 | 266 | 5 | 1 | 1 | 266 | 1 | 261 | 0.0 | 516 |
| MS.gene41198.t1 | MTR_4g063570 | 95.735 | 211 | 4 | 1 | 56 | 266 | 3 | 208 | 6.57e-145 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41198.t1 | AT5G59960 | 77.059 | 340 | 78 | 0 | 12 | 351 | 16 | 355 | 0.0 | 556 |
| MS.gene41198.t1 | AT5G59960 | 76.712 | 292 | 68 | 0 | 12 | 303 | 16 | 307 | 7.05e-168 | 471 |
| MS.gene41198.t1 | AT5G59960 | 81.275 | 251 | 47 | 0 | 101 | 351 | 1 | 251 | 2.84e-154 | 434 |
Find 75 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTATCTTTCAGAAATTA+AGG | 0.220788 | 4.1:+37026004 | MS.gene41198:CDS |
| TTCAGAAATTAAGGTCCTTC+AGG | 0.292111 | 4.1:+37026013 | MS.gene41198:CDS |
| GAATACCGAAGGAGCACTTC+TGG | 0.300314 | 4.1:-37024763 | None:intergenic |
| GGTATTGGCCATCCTCTTGC+TGG | 0.327491 | 4.1:+37026770 | MS.gene41198:CDS |
| TTCCAAACTGCTTTCTTAGT+TGG | 0.343184 | 4.1:+37025805 | MS.gene41198:CDS |
| AAGAAAGCAGTTTGGAAAAC+AGG | 0.345106 | 4.1:-37025799 | None:intergenic |
| ATCTCATTAGTTTGTTCTTC+AGG | 0.350126 | 4.1:+37026734 | MS.gene41198:CDS |
| TACATACCCATTTGTGAAAC+AGG | 0.360149 | 4.1:-37023956 | None:intergenic |
| AATTCGCCGCCGAGAAATTC+CGG | 0.371340 | 4.1:+37022681 | MS.gene41198:CDS |
| CCATCCATGGTGTAAATTAC+AGG | 0.372572 | 4.1:-37023810 | None:intergenic |
| GGTTGCTTTATCCATGGTAT+TGG | 0.378782 | 4.1:+37026755 | MS.gene41198:CDS |
| CATTTGTGGCACCTTGAACT+AGG | 0.386213 | 4.1:-37024792 | None:intergenic |
| CCCTCAAATTCAGTACCTCT+TGG | 0.387643 | 4.1:+37025433 | MS.gene41198:intron |
| GCAGAGGCGTAATTTGTTGC+AGG | 0.395535 | 4.1:+37022864 | MS.gene41198:CDS |
| TTAGCCTCCTGTTTCACAAA+TGG | 0.406813 | 4.1:+37023949 | MS.gene41198:CDS |
| GAGCTGTTCGTCATGCTGCC+TGG | 0.412460 | 4.1:+37026217 | MS.gene41198:CDS |
| TAGCCTCCTGTTTCACAAAT+GGG | 0.426157 | 4.1:+37023950 | MS.gene41198:CDS |
| AGAGAGAGCATCGAGATAAC+CGG | 0.433517 | 4.1:-37022700 | None:intergenic |
| ATTTGTGGCACCTTGAACTA+GGG | 0.437158 | 4.1:-37024791 | None:intergenic |
| AAGAAAATCCAGTGCTTCCC+AGG | 0.438344 | 4.1:-37026235 | None:intergenic |
| TCAGAAATTAAGGTCCTTCA+GGG | 0.439567 | 4.1:+37026014 | MS.gene41198:CDS |
| TATTCATCTGCCCTAGTTCA+AGG | 0.439663 | 4.1:+37024781 | MS.gene41198:CDS |
| ACTTTGTGATTTCCTGCATT+CGG | 0.440801 | 4.1:+37026794 | MS.gene41198:CDS |
| TCGAGATAACCGGAATTTCT+CGG | 0.441952 | 4.1:-37022690 | None:intergenic |
| TTACCAGCTTCAAAAGCTAA+AGG | 0.450026 | 4.1:+37025965 | MS.gene41198:intron |
| TGTGAATGAACTTACTGATC+AGG | 0.450938 | 4.1:+37025846 | MS.gene41198:CDS |
| AGCTGTTCGTCATGCTGCCT+GGG | 0.455494 | 4.1:+37026218 | MS.gene41198:CDS |
| AGAAAATATCAACCCGAGTA+AGG | 0.461893 | 4.1:-37026830 | None:intergenic |
| CAAACTGCTTTCTTAGTTGG+CGG | 0.463190 | 4.1:+37025808 | MS.gene41198:CDS |
| TCATGCTGCCTGGGAAGCAC+TGG | 0.468375 | 4.1:+37026227 | MS.gene41198:CDS |
| CGCCAACTAAGAAAGCAGTT+TGG | 0.468480 | 4.1:-37025807 | None:intergenic |
| ATAATCCAGAAGTGCTCCTT+CGG | 0.475177 | 4.1:+37024758 | MS.gene41198:CDS |
| ATTGAATAAGATTCCTCTCC+AGG | 0.480234 | 4.1:+37025481 | MS.gene41198:CDS |
| TCTTCAGGTTGCTTTATCCA+TGG | 0.482081 | 4.1:+37026749 | MS.gene41198:CDS |
| TTTGTACAAGTGCCTGAAAG+TGG | 0.498510 | 4.1:+37023867 | MS.gene41198:CDS |
| GAAAGATAATGCAGCAGCAC+AGG | 0.500851 | 4.1:-37025993 | None:intergenic |
| TTGACATGATTGTCCAACTC+TGG | 0.511635 | 4.1:+37023901 | MS.gene41198:CDS |
| TACAGGTTGGGCAGTACCCT+CGG | 0.514602 | 4.1:+37026710 | MS.gene41198:intron |
| TTCATACCAGAAAACATTTG+TGG | 0.519635 | 4.1:-37024806 | None:intergenic |
| CATGACGAACAGCTCTAGTC+GGG | 0.524027 | 4.1:-37026209 | None:intergenic |
| TTGGACAATCATGTCAAGGA+TGG | 0.533101 | 4.1:-37023895 | None:intergenic |
| CCTGTAATTTACACCATGGA+TGG | 0.535613 | 4.1:+37023810 | MS.gene41198:CDS |
| GATTCATAAGAAGCTTCAAC+GGG | 0.542429 | 4.1:+37022728 | MS.gene41198:CDS |
| GTAAAAGATTGTCCGAATGC+AGG | 0.543724 | 4.1:-37026806 | None:intergenic |
| TCATTCACAAATATATCTGC+AGG | 0.545748 | 4.1:-37025832 | None:intergenic |
| CAAATGACTGACTCCAGAGT+TGG | 0.548174 | 4.1:-37023914 | None:intergenic |
| TTCTTACACGAAATATAGAC+TGG | 0.556069 | 4.1:-37025309 | None:intergenic |
| ACAGCTCTAGTCGGGTACAT+TGG | 0.557826 | 4.1:-37026201 | None:intergenic |
| GAAACACAACGGACCATCCA+TGG | 0.558578 | 4.1:-37023823 | None:intergenic |
| AACAAACTAATGAGATGCCG+AGG | 0.563733 | 4.1:-37026727 | None:intergenic |
| TGGACAATCATGTCAAGGAT+GGG | 0.572002 | 4.1:-37023894 | None:intergenic |
| GTCGGGTACATTGGACCACC+AGG | 0.572378 | 4.1:-37026192 | None:intergenic |
| TTCTCCTGTAATTTACACCA+TGG | 0.575886 | 4.1:+37023806 | MS.gene41198:CDS |
| GCATGACGAACAGCTCTAGT+CGG | 0.576852 | 4.1:-37026210 | None:intergenic |
| ACAAAGTTCCAGCAAGAGGA+TGG | 0.582995 | 4.1:-37026778 | None:intergenic |
| CGATTCATAAGAAGCTTCAA+CGG | 0.588835 | 4.1:+37022727 | MS.gene41198:CDS |
| GAGGTTGATGATCGAGCCAA+AGG | 0.590258 | 4.1:+37022910 | MS.gene41198:CDS |
| CTGATAGGGTATACCTGGAG+AGG | 0.599368 | 4.1:-37025494 | None:intergenic |
| CCAGCTTCAAAAGCTAAAGG+TGG | 0.599881 | 4.1:+37025968 | MS.gene41198:intron |
| CAAGAGGATGGCCAATACCA+TGG | 0.605415 | 4.1:-37026766 | None:intergenic |
| AATCACAAAGTTCCAGCAAG+AGG | 0.620726 | 4.1:-37026782 | None:intergenic |
| TCTCGGCGGCGAATTAGCGT+CGG | 0.631890 | 4.1:-37022673 | None:intergenic |
| AGAGTTGGACAATCATGTCA+AGG | 0.632220 | 4.1:-37023899 | None:intergenic |
| TTGACATTCAAACAAATACA+AGG | 0.632833 | 4.1:+37025281 | MS.gene41198:CDS |
| AGAAAGCAGTTTGGAAAACA+GGG | 0.635503 | 4.1:-37025798 | None:intergenic |
| CCTCTGCGACGAATTTGCCA+AGG | 0.637071 | 4.1:-37022848 | None:intergenic |
| CCTTGGCAAATTCGTCGCAG+AGG | 0.660365 | 4.1:+37022848 | MS.gene41198:CDS |
| GAATCTTATTCAATCGAGTG+TGG | 0.672963 | 4.1:-37025472 | None:intergenic |
| ATACCCATTTGTGAAACAGG+AGG | 0.674414 | 4.1:-37023953 | None:intergenic |
| CTAGGGCAGATGAATACCGA+AGG | 0.681129 | 4.1:-37024774 | None:intergenic |
| ACAAACTAATGAGATGCCGA+GGG | 0.696864 | 4.1:-37026726 | None:intergenic |
| AGCACATCATAGAAACACAA+CGG | 0.709751 | 4.1:-37023834 | None:intergenic |
| TGGTTGATGTAGTACCCTGA+AGG | 0.723094 | 4.1:-37026028 | None:intergenic |
| GTAATGCAACATCATCCAAG+AGG | 0.729405 | 4.1:-37025448 | None:intergenic |
| AGATAACCGGAATTTCTCGG+CGG | 0.785455 | 4.1:-37022687 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATATTTTTTAATTTT+GGG | + | chr4.1:37024446-37024465 | MS.gene41198:intron | 0.0% |
| !!! | TATTATATATTTTTTAATTT+TGG | + | chr4.1:37024445-37024464 | MS.gene41198:intron | 0.0% |
| !! | ACATAAGTTAAATTAAATAT+AGG | - | chr4.1:37025347-37025366 | None:intergenic | 10.0% |
| !! | AAATTAAAACGTTACTTAAA+TGG | + | chr4.1:37024842-37024861 | MS.gene41198:intron | 15.0% |
| !! | GTATATTTGAATCTAAATAA+GGG | + | chr4.1:37023640-37023659 | MS.gene41198:intron | 15.0% |
| !! | TAAACAATAAAAATTCTAAC+CGG | - | chr4.1:37026264-37026283 | None:intergenic | 15.0% |
| !! | TATATTATTATATCCCATTT+AGG | - | chr4.1:37024997-37025016 | None:intergenic | 15.0% |
| !! | TATATTTGAATCTAAATAAG+GGG | + | chr4.1:37023641-37023660 | MS.gene41198:intron | 15.0% |
| !! | TCACTCTATAAATAATTATA+CGG | - | chr4.1:37024337-37024356 | None:intergenic | 15.0% |
| !! | TGTATATTTGAATCTAAATA+AGG | + | chr4.1:37023639-37023658 | MS.gene41198:intron | 15.0% |
| !! | TTTAAGAAATGAGTTAAAAA+GGG | - | chr4.1:37026535-37026554 | None:intergenic | 15.0% |
| !!! | AAATATTGATGTTGTTTTTA+TGG | + | chr4.1:37026682-37026701 | MS.gene41198:intron | 15.0% |
| !!! | ATAATCTTTATTTTCTTGAT+AGG | + | chr4.1:37023667-37023686 | MS.gene41198:intron | 15.0% |
| !!! | TAATCTTTATTTTCTTGATA+GGG | + | chr4.1:37023668-37023687 | MS.gene41198:intron | 15.0% |
| !!! | TCTAGCAATTTATTTTAATT+TGG | - | chr4.1:37026303-37026322 | None:intergenic | 15.0% |
| !!! | TTTTTAACTCATTTCTTAAA+GGG | + | chr4.1:37026535-37026554 | MS.gene41198:intron | 15.0% |
| !! | AAATGAAATATATACCCAAA+AGG | - | chr4.1:37024550-37024569 | None:intergenic | 20.0% |
| !! | ATATAATATGCATTAGTTCA+TGG | - | chr4.1:37024433-37024452 | None:intergenic | 20.0% |
| !! | ATGGGATATAATAATATATG+TGG | + | chr4.1:37024999-37025018 | MS.gene41198:intron | 20.0% |
| !! | ATTATGTTACCTTTAATCAT+TGG | + | chr4.1:37025927-37025946 | MS.gene41198:intron | 20.0% |
| !! | CTATTCAAGATTAGAAAAAT+AGG | + | chr4.1:37023545-37023564 | MS.gene41198:intron | 20.0% |
| !! | TAGAAATGTCATATTTGTAT+TGG | + | chr4.1:37023493-37023512 | MS.gene41198:intron | 20.0% |
| !! | TGGGATATAATAATATATGT+GGG | + | chr4.1:37025000-37025019 | MS.gene41198:intron | 20.0% |
| !!! | AATCTTTATTTTCTTGATAG+GGG | + | chr4.1:37023669-37023688 | MS.gene41198:intron | 20.0% |
| !!! | ATATTGGATTGTTATTGAAA+CGG | - | chr4.1:37025097-37025116 | None:intergenic | 20.0% |
| !!! | ATTTTTGAGGTCTTTTTTAT+GGG | + | chr4.1:37026410-37026429 | MS.gene41198:intron | 20.0% |
| !!! | CTTTAAGAAATGAGTTAAAA+AGG | - | chr4.1:37026536-37026555 | None:intergenic | 20.0% |
| !!! | CTTTTTAACTCATTTCTTAA+AGG | + | chr4.1:37026534-37026553 | MS.gene41198:intron | 20.0% |
| !!! | GATCAATTAAAAGATTTTTG+AGG | + | chr4.1:37026397-37026416 | MS.gene41198:intron | 20.0% |
| !!! | TAAAATGAGATTTTCATGTA+AGG | + | chr4.1:37023349-37023368 | MS.gene41198:intron | 20.0% |
| !!! | TATAATTTTGCAAAAAGACA+AGG | + | chr4.1:37024866-37024885 | MS.gene41198:intron | 20.0% |
| !!! | TTCATTCTATTTTACAATTC+AGG | + | chr4.1:37025667-37025686 | MS.gene41198:CDS | 20.0% |
| !!! | TTTTATTTAGTGTGATAGTA+TGG | + | chr4.1:37024021-37024040 | MS.gene41198:intron | 20.0% |
| !!! | TTTTTATGAACAACATGTAT+TGG | + | chr4.1:37023381-37023400 | MS.gene41198:intron | 20.0% |
| ! | AAAAGAGTGAATGATTTGAA+TGG | + | chr4.1:37023227-37023246 | MS.gene41198:intron | 25.0% |
| ! | AAAGTCAATTAGAAACTGAT+AGG | - | chr4.1:37024663-37024682 | None:intergenic | 25.0% |
| ! | AAAGTCCTATAAACAATTGT+TGG | - | chr4.1:37025548-37025567 | None:intergenic | 25.0% |
| ! | AAATGAGTTAAAAAGGGAAA+AGG | - | chr4.1:37026529-37026548 | None:intergenic | 25.0% |
| ! | AAATTGACACCAATGATTAA+AGG | - | chr4.1:37025939-37025958 | None:intergenic | 25.0% |
| ! | AAGACAGTCTTAATAACATT+TGG | - | chr4.1:37025162-37025181 | None:intergenic | 25.0% |
| ! | AATATCATACAGTCAAATTG+AGG | - | chr4.1:37024143-37024162 | None:intergenic | 25.0% |
| ! | AATTCAAAACCAGCAATTAA+TGG | - | chr4.1:37024047-37024066 | None:intergenic | 25.0% |
| ! | AATTTGACTGTATGATATTC+TGG | + | chr4.1:37024144-37024163 | MS.gene41198:intron | 25.0% |
| ! | ATCCATTAAAAAACACAGTT+TGG | + | chr4.1:37025128-37025147 | MS.gene41198:intron | 25.0% |
| ! | GCATTATCTTTCAGAAATTA+AGG | + | chr4.1:37026004-37026023 | MS.gene41198:CDS | 25.0% |
| ! | TCAGAAAGCAAAAAACAATA+CGG | - | chr4.1:37023994-37024013 | None:intergenic | 25.0% |
| ! | TGATCTCAATAATGAAAGAT+GGG | - | chr4.1:37026382-37026401 | None:intergenic | 25.0% |
| ! | TGTTAGCATAAACAAAAGAA+TGG | - | chr4.1:37026109-37026128 | None:intergenic | 25.0% |
| ! | TTAAATTTCCAACTGATTAC+AGG | + | chr4.1:37026466-37026485 | MS.gene41198:intron | 25.0% |
| ! | TTATGTGTATCATCTGAATA+AGG | + | chr4.1:37025361-37025380 | MS.gene41198:intron | 25.0% |
| ! | TTGACATTCAAACAAATACA+AGG | + | chr4.1:37025281-37025300 | MS.gene41198:CDS | 25.0% |
| ! | TTGATCTCAATAATGAAAGA+TGG | - | chr4.1:37026383-37026402 | None:intergenic | 25.0% |
| !! | ATAGGAACTTGTATTTCTTT+TGG | - | chr4.1:37024645-37024664 | None:intergenic | 25.0% |
| !! | ATTGATAACCATGTTAAATG+AGG | + | chr4.1:37023582-37023601 | MS.gene41198:intron | 25.0% |
| !! | CTAAGGATTAAATCTAAAAC+CGG | - | chr4.1:37024261-37024280 | None:intergenic | 25.0% |
| !! | GGAAATGCAATAATTGTTTT+TGG | + | chr4.1:37025244-37025263 | MS.gene41198:intron | 25.0% |
| !! | TTGTATTTCTTTTGGCAATA+TGG | - | chr4.1:37024637-37024656 | None:intergenic | 25.0% |
| !! | TTTTATGCGGAGAAAAAAAA+TGG | + | chr4.1:37022758-37022777 | MS.gene41198:intron | 25.0% |
| !!! | AACTGTGTTTTTTAATGGAT+AGG | - | chr4.1:37025128-37025147 | None:intergenic | 25.0% |
| !!! | AATTTTTGTTTTGATGCTAC+AGG | + | chr4.1:37022825-37022844 | MS.gene41198:intron | 25.0% |
| !!! | ACGTTTTAATTTATAACAGC+CGG | - | chr4.1:37024834-37024853 | None:intergenic | 25.0% |
| !!! | ATCTTTATTTTCTTGATAGG+GGG | + | chr4.1:37023670-37023689 | MS.gene41198:intron | 25.0% |
| !!! | ATGGTTTTTAGTTCATTGTT+TGG | + | chr4.1:37023306-37023325 | MS.gene41198:intron | 25.0% |
| !!! | ATTCTTTTGTTTATGCTAAC+AGG | + | chr4.1:37026108-37026127 | MS.gene41198:intron | 25.0% |
| !!! | ATTGTTTTTTGCTTTCTGAA+GGG | + | chr4.1:37023995-37024014 | MS.gene41198:intron | 25.0% |
| !!! | CTGATAGGAAATGTTTTTTT+GGG | - | chr4.1:37026342-37026361 | None:intergenic | 25.0% |
| !!! | GATTTTTGAGGTCTTTTTTA+TGG | + | chr4.1:37026409-37026428 | MS.gene41198:intron | 25.0% |
| !!! | GTTTTTTTAAAATGACCAGA+TGG | + | chr4.1:37026500-37026519 | MS.gene41198:intron | 25.0% |
| !!! | TAGAATTTGCTATGAGAATT+TGG | + | chr4.1:37024481-37024500 | MS.gene41198:intron | 25.0% |
| !!! | TATAATTTTGCTATGTCACT+TGG | + | chr4.1:37023463-37023482 | MS.gene41198:intron | 25.0% |
| !!! | TATTGTTTTTTGCTTTCTGA+AGG | + | chr4.1:37023994-37024013 | MS.gene41198:intron | 25.0% |
| !!! | TCTGATAGGAAATGTTTTTT+TGG | - | chr4.1:37026343-37026362 | None:intergenic | 25.0% |
| !!! | TTGTTTTTATGGTATCATAC+AGG | + | chr4.1:37026693-37026712 | MS.gene41198:intron | 25.0% |
| AAATAAAGAAAACCTCCACT+TGG | - | chr4.1:37023745-37023764 | None:intergenic | 30.0% | |
| ACCATTGCATCATTATTCAT+AGG | - | chr4.1:37025716-37025735 | None:intergenic | 30.0% | |
| ATGAGGAGAATACATAACAA+TGG | + | chr4.1:37023599-37023618 | MS.gene41198:intron | 30.0% | |
| ATTTCGTGTAAGAATTCTAG+TGG | + | chr4.1:37025318-37025337 | MS.gene41198:intron | 30.0% | |
| CAAAGAACATGCAAAAGAAA+TGG | - | chr4.1:37025408-37025427 | None:intergenic | 30.0% | |
| CAATATTTCCTGTAATCAGT+TGG | - | chr4.1:37026477-37026496 | None:intergenic | 30.0% | |
| CATGTTTGGAAAATCAATCA+GGG | + | chr4.1:37025223-37025242 | MS.gene41198:intron | 30.0% | |
| GCAAACTAATATGAACTTTG+TGG | - | chr4.1:37026577-37026596 | None:intergenic | 30.0% | |
| GTCTTGTATTGCTAAATGTA+AGG | + | chr4.1:37023411-37023430 | MS.gene41198:intron | 30.0% | |
| GTTATTAAGACTGTCTTCAT+GGG | + | chr4.1:37025165-37025184 | MS.gene41198:intron | 30.0% | |
| TATTATATCCCATTTAGGAG+TGG | - | chr4.1:37024992-37025011 | None:intergenic | 30.0% | |
| TCAAAAGCTACAATTACCTT+TGG | - | chr4.1:37022929-37022948 | None:intergenic | 30.0% | |
| TCATTCACAAATATATCTGC+AGG | - | chr4.1:37025835-37025854 | None:intergenic | 30.0% | |
| TGGATAGGATAAAGTCATAT+TGG | - | chr4.1:37025113-37025132 | None:intergenic | 30.0% | |
| TGTAAGTGTATTGAGAAGTT+AGG | - | chr4.1:37024718-37024737 | None:intergenic | 30.0% | |
| TGTAATGTAATTGACTGACA+CGG | + | chr4.1:37023043-37023062 | MS.gene41198:intron | 30.0% | |
| TGTATTCTCCTCATTTAACA+TGG | - | chr4.1:37023593-37023612 | None:intergenic | 30.0% | |
| TGTTATTAAGACTGTCTTCA+TGG | + | chr4.1:37025164-37025183 | MS.gene41198:intron | 30.0% | |
| TTCATACCAGAAAACATTTG+TGG | - | chr4.1:37024809-37024828 | None:intergenic | 30.0% | |
| TTCTTACACGAAATATAGAC+TGG | - | chr4.1:37025312-37025331 | None:intergenic | 30.0% | |
| TTTATGGTATCATACAGGTT+GGG | + | chr4.1:37026698-37026717 | MS.gene41198:intron | 30.0% | |
| TTTCGTGTAAGAATTCTAGT+GGG | + | chr4.1:37025319-37025338 | MS.gene41198:intron | 30.0% | |
| TTTGTTTATGCTAACAGGTA+TGG | + | chr4.1:37026113-37026132 | MS.gene41198:intron | 30.0% | |
| ! | AATTTTGCAAAAAGACAAGG+TGG | + | chr4.1:37024869-37024888 | MS.gene41198:intron | 30.0% |
| ! | ACAATCTTTTACTCCTTACT+CGG | + | chr4.1:37026817-37026836 | MS.gene41198:CDS | 30.0% |
| ! | GAGTTGGGATTTTATTAATG+CGG | + | chr4.1:37025522-37025541 | MS.gene41198:intron | 30.0% |
| ! | GATATTTTCTACATGGGAAA+AGG | + | chr4.1:37026843-37026862 | MS.gene41198:CDS | 30.0% |
| ! | TTTTATGGTATCATACAGGT+TGG | + | chr4.1:37026697-37026716 | MS.gene41198:intron | 30.0% |
| !! | ATAGGCTTTCATTTGTTGTA+AGG | + | chr4.1:37024602-37024621 | MS.gene41198:intron | 30.0% |
| !! | ATCTCATTAGTTTGTTCTTC+AGG | + | chr4.1:37026734-37026753 | MS.gene41198:CDS | 30.0% |
| !! | ATGTTTTCTGGTATGAATAC+CGG | + | chr4.1:37024812-37024831 | MS.gene41198:intron | 30.0% |
| !! | CTACTTTTCATTGAACTATC+AGG | + | chr4.1:37025612-37025631 | MS.gene41198:intron | 30.0% |
| !! | GTTATGTTTTTACAGAGTAC+TGG | + | chr4.1:37024503-37024522 | MS.gene41198:intron | 30.0% |
| !! | TTGTATAGTTTTACTTCTCC+TGG | + | chr4.1:37026174-37026193 | MS.gene41198:CDS | 30.0% |
| !!! | CGGTTTTAGATTTAATCCTT+AGG | + | chr4.1:37024259-37024278 | MS.gene41198:intron | 30.0% |
| !!! | TGCCAAACTGTGTTTTTTAA+TGG | - | chr4.1:37025133-37025152 | None:intergenic | 30.0% |
| AAACAAGAATTACCAAGTGG+AGG | + | chr4.1:37023730-37023749 | MS.gene41198:intron | 35.0% | |
| AAACCTCTACTATGATAGAG+TGG | + | chr4.1:37025191-37025210 | MS.gene41198:intron | 35.0% | |
| AACACCGTAATTCATAAGCA+CGG | + | chr4.1:37026624-37026643 | MS.gene41198:intron | 35.0% | |
| AACCATTCAGGTGCAATAAT+TGG | + | chr4.1:37026046-37026065 | MS.gene41198:intron | 35.0% | |
| AACCTCTACTATGATAGAGT+GGG | + | chr4.1:37025192-37025211 | MS.gene41198:intron | 35.0% | |
| AAGAAAGCAGTTTGGAAAAC+AGG | - | chr4.1:37025802-37025821 | None:intergenic | 35.0% | |
| AAGACCGTGCTTATGAATTA+CGG | - | chr4.1:37026631-37026650 | None:intergenic | 35.0% | |
| AATTTCTTCATATGAGCCAG+AGG | - | chr4.1:37025910-37025929 | None:intergenic | 35.0% | |
| ACAAACAGCTAAGTGAAAAC+GGG | - | chr4.1:37024225-37024244 | None:intergenic | 35.0% | |
| ACTTTGTGATTTCCTGCATT+CGG | + | chr4.1:37026794-37026813 | MS.gene41198:CDS | 35.0% | |
| AGAAAATATCAACCCGAGTA+AGG | - | chr4.1:37026833-37026852 | None:intergenic | 35.0% | |
| AGAAAGCAGTTTGGAAAACA+GGG | - | chr4.1:37025801-37025820 | None:intergenic | 35.0% | |
| AGCACATCATAGAAACACAA+CGG | - | chr4.1:37023837-37023856 | None:intergenic | 35.0% | |
| ATAGTATGGCCATTAATTGC+TGG | + | chr4.1:37024035-37024054 | MS.gene41198:intron | 35.0% | |
| ATTGAATAAGATTCCTCTCC+AGG | + | chr4.1:37025481-37025500 | MS.gene41198:CDS | 35.0% | |
| CCATGTTTGGAAAATCAATC+AGG | + | chr4.1:37025222-37025241 | MS.gene41198:intron | 35.0% | |
| CGATTCATAAGAAGCTTCAA+CGG | + | chr4.1:37022727-37022746 | MS.gene41198:CDS | 35.0% | |
| CTGGAAAATTGTACTCTGAT+AGG | - | chr4.1:37026357-37026376 | None:intergenic | 35.0% | |
| GAATCTTATTCAATCGAGTG+TGG | - | chr4.1:37025475-37025494 | None:intergenic | 35.0% | |
| GACAAACAGCTAAGTGAAAA+CGG | - | chr4.1:37024226-37024245 | None:intergenic | 35.0% | |
| GATTCAATAGCTATGAAGCA+GGG | + | chr4.1:37022972-37022991 | MS.gene41198:intron | 35.0% | |
| GATTCATAAGAAGCTTCAAC+GGG | + | chr4.1:37022728-37022747 | MS.gene41198:CDS | 35.0% | |
| GCAAAACAAGAATTACCAAG+TGG | + | chr4.1:37023727-37023746 | MS.gene41198:intron | 35.0% | |
| GCCTATGAATAATGATGCAA+TGG | + | chr4.1:37025712-37025731 | MS.gene41198:intron | 35.0% | |
| GTTTGTCAAATGCTTGAAAC+CGG | + | chr4.1:37024239-37024258 | MS.gene41198:intron | 35.0% | |
| TAAAACTGATAGGGTATACC+TGG | - | chr4.1:37025502-37025521 | None:intergenic | 35.0% | |
| TACATACCCATTTGTGAAAC+AGG | - | chr4.1:37023959-37023978 | None:intergenic | 35.0% | |
| TACTCCAAATGATCATAACC+AGG | - | chr4.1:37024192-37024211 | None:intergenic | 35.0% | |
| TCAGAAATTAAGGTCCTTCA+GGG | + | chr4.1:37026014-37026033 | MS.gene41198:CDS | 35.0% | |
| TGAACCTGGTTATGATCATT+TGG | + | chr4.1:37024185-37024204 | MS.gene41198:intron | 35.0% | |
| TGATTCAATAGCTATGAAGC+AGG | + | chr4.1:37022971-37022990 | MS.gene41198:intron | 35.0% | |
| TGTGAATGAACTTACTGATC+AGG | + | chr4.1:37025846-37025865 | MS.gene41198:CDS | 35.0% | |
| TTACAATTCAGGTAGCCATT+CGG | + | chr4.1:37025678-37025697 | MS.gene41198:intron | 35.0% | |
| TTACCAGCTTCAAAAGCTAA+AGG | + | chr4.1:37025965-37025984 | MS.gene41198:intron | 35.0% | |
| TTATGGGTGGTATTATATGC+TGG | + | chr4.1:37026426-37026445 | MS.gene41198:intron | 35.0% | |
| TTCAGAAATTAAGGTCCTTC+AGG | + | chr4.1:37026013-37026032 | MS.gene41198:CDS | 35.0% | |
| TTCCAAACTGCTTTCTTAGT+TGG | + | chr4.1:37025805-37025824 | MS.gene41198:CDS | 35.0% | |
| TTCTCCTGTAATTTACACCA+TGG | + | chr4.1:37023806-37023825 | MS.gene41198:CDS | 35.0% | |
| ! | ATATGTATCTTTTGCTCTCG+AGG | + | chr4.1:37025644-37025663 | MS.gene41198:CDS | 35.0% |
| ! | CAATCTTTTACTCCTTACTC+GGG | + | chr4.1:37026818-37026837 | MS.gene41198:CDS | 35.0% |
| ! | CTATCAGAGTACAATTTTCC+AGG | + | chr4.1:37026355-37026374 | MS.gene41198:intron | 35.0% |
| ! | TTATCTTGTTTGCATGCTCA+TGG | + | chr4.1:37023287-37023306 | MS.gene41198:intron | 35.0% |
| !! | AGCACTGGATTTTCTTTTTC+CGG | + | chr4.1:37026242-37026261 | MS.gene41198:CDS | 35.0% |
| !! | ATCCCAACTCTAAAACTGAT+AGG | - | chr4.1:37025512-37025531 | None:intergenic | 35.0% |
| !! | CCTGATTGATTTTCCAAACA+TGG | - | chr4.1:37025225-37025244 | None:intergenic | 35.0% |
| !! | TATAGTTTTACTTCTCCTGG+TGG | + | chr4.1:37026177-37026196 | MS.gene41198:CDS | 35.0% |
| !! | TCCCAACTCTAAAACTGATA+GGG | - | chr4.1:37025511-37025530 | None:intergenic | 35.0% |
| !! | TTTATTTTCTTGATAGGGGG+TGG | + | chr4.1:37023673-37023692 | MS.gene41198:intron | 35.0% |
| !!! | AACGGGTGAGTTTTTTTATG+CGG | + | chr4.1:37022745-37022764 | MS.gene41198:intron | 35.0% |
| !!! | ACCCTATCAGTTTTAGAGTT+GGG | + | chr4.1:37025507-37025526 | MS.gene41198:intron | 35.0% |
| !!! | CGGGTTGATATTTTCTACAT+GGG | + | chr4.1:37026837-37026856 | MS.gene41198:CDS | 35.0% |
| !!! | TACCCTATCAGTTTTAGAGT+TGG | + | chr4.1:37025506-37025525 | MS.gene41198:intron | 35.0% |
| !!! | TAGGAAATGTTTTTTTGGGC+TGG | - | chr4.1:37026338-37026357 | None:intergenic | 35.0% |
| !!! | TATTCCCGTTCTGTTTTTGA+GGG | + | chr4.1:37024574-37024593 | MS.gene41198:intron | 35.0% |
| !!! | TCGGGTTGATATTTTCTACA+TGG | + | chr4.1:37026836-37026855 | MS.gene41198:CDS | 35.0% |
| !!! | TTATTCCCGTTCTGTTTTTG+AGG | + | chr4.1:37024573-37024592 | MS.gene41198:intron | 35.0% |
| !!! | TTGTTTTTGGTGACATGTAC+AGG | + | chr4.1:37025257-37025276 | MS.gene41198:intron | 35.0% |
| !!! | TTTGAGGTCTTTTTTATGGG+TGG | + | chr4.1:37026413-37026432 | MS.gene41198:intron | 35.0% |
| !!! | TTTTGCTGATGTAGCTTTAG+AGG | + | chr4.1:37022891-37022910 | MS.gene41198:CDS | 35.0% |
| AAAGGGAAAAGGTAACCATC+TGG | - | chr4.1:37026518-37026537 | None:intergenic | 40.0% | |
| AACAAACTAATGAGATGCCG+AGG | - | chr4.1:37026730-37026749 | None:intergenic | 40.0% | |
| AATATTATCCTCTCTGCAGC+TGG | + | chr4.1:37025748-37025767 | MS.gene41198:intron | 40.0% | |
| AATCACAAAGTTCCAGCAAG+AGG | - | chr4.1:37026785-37026804 | None:intergenic | 40.0% | |
| ACAAACTAATGAGATGCCGA+GGG | - | chr4.1:37026729-37026748 | None:intergenic | 40.0% | |
| AGAGTTGGACAATCATGTCA+AGG | - | chr4.1:37023902-37023921 | None:intergenic | 40.0% | |
| AGTTTGCAACATAGCACTAG+TGG | + | chr4.1:37026590-37026609 | MS.gene41198:intron | 40.0% | |
| ATACCCATTTGTGAAACAGG+AGG | - | chr4.1:37023956-37023975 | None:intergenic | 40.0% | |
| ATAGCTATGAAGCAGGGATA+CGG | + | chr4.1:37022978-37022997 | MS.gene41198:intron | 40.0% | |
| ATTTGTGGCACCTTGAACTA+GGG | - | chr4.1:37024794-37024813 | None:intergenic | 40.0% | |
| CAAACTGCTTTCTTAGTTGG+CGG | + | chr4.1:37025808-37025827 | MS.gene41198:CDS | 40.0% | |
| CAATAATGAAAGATGGGACC+TGG | - | chr4.1:37026376-37026395 | None:intergenic | 40.0% | |
| CCATCCATGGTGTAAATTAC+AGG | - | chr4.1:37023813-37023832 | None:intergenic | 40.0% | |
| CCTGTAATTTACACCATGGA+TGG | + | chr4.1:37023810-37023829 | MS.gene41198:CDS | 40.0% | |
| GCAATGACTCTTCAAATCGA+AGG | - | chr4.1:37023164-37023183 | None:intergenic | 40.0% | |
| GTAAAAGATTGTCCGAATGC+AGG | - | chr4.1:37026809-37026828 | None:intergenic | 40.0% | |
| GTAACCCCTCAAAAACAGAA+CGG | - | chr4.1:37024582-37024601 | None:intergenic | 40.0% | |
| GTAATGCAACATCATCCAAG+AGG | - | chr4.1:37025451-37025470 | None:intergenic | 40.0% | |
| GTCCAATTATTGCACCTGAA+TGG | - | chr4.1:37026051-37026070 | None:intergenic | 40.0% | |
| TAACCCCTCAAAAACAGAAC+GGG | - | chr4.1:37024581-37024600 | None:intergenic | 40.0% | |
| TAGCCTCCTGTTTCACAAAT+GGG | + | chr4.1:37023950-37023969 | MS.gene41198:CDS | 40.0% | |
| TAGTATGCACTGAGTTCCTA+AGG | - | chr4.1:37024278-37024297 | None:intergenic | 40.0% | |
| TATCCCATTTAGGAGTGGAT+TGG | - | chr4.1:37024987-37025006 | None:intergenic | 40.0% | |
| TATTCATCTGCCCTAGTTCA+AGG | + | chr4.1:37024781-37024800 | MS.gene41198:CDS | 40.0% | |
| TCAGGTGCAATAATTGGACA+TGG | + | chr4.1:37026052-37026071 | MS.gene41198:intron | 40.0% | |
| TCGAGATAACCGGAATTTCT+CGG | - | chr4.1:37022693-37022712 | None:intergenic | 40.0% | |
| TGCGGCCAACAATTGTTTAT+AGG | + | chr4.1:37025540-37025559 | MS.gene41198:intron | 40.0% | |
| TGGACAATCATGTCAAGGAT+GGG | - | chr4.1:37023897-37023916 | None:intergenic | 40.0% | |
| TGTGATGCAATTGCATGTGT+CGG | + | chr4.1:37023126-37023145 | MS.gene41198:intron | 40.0% | |
| TTAGCCTCCTGTTTCACAAA+TGG | + | chr4.1:37023949-37023968 | MS.gene41198:CDS | 40.0% | |
| TTCATATGAGCCAGAGGATA+CGG | - | chr4.1:37025904-37025923 | None:intergenic | 40.0% | |
| TTGACATGATTGTCCAACTC+TGG | + | chr4.1:37023901-37023920 | MS.gene41198:CDS | 40.0% | |
| TTGGACAATCATGTCAAGGA+TGG | - | chr4.1:37023898-37023917 | None:intergenic | 40.0% | |
| TTTGTACAAGTGCCTGAAAG+TGG | + | chr4.1:37023867-37023886 | MS.gene41198:CDS | 40.0% | |
| ! | AAGAGTCACTCTTGATGACA+TGG | + | chr4.1:37024093-37024112 | MS.gene41198:intron | 40.0% |
| ! | AAGCATGATAGTGTTGTGCA+TGG | + | chr4.1:37023263-37023282 | MS.gene41198:intron | 40.0% |
| ! | GCAAAAAGACAAGGTGGATT+TGG | + | chr4.1:37024875-37024894 | MS.gene41198:intron | 40.0% |
| ! | GGTTGCTTTATCCATGGTAT+TGG | + | chr4.1:37026755-37026774 | MS.gene41198:CDS | 40.0% |
| !! | AAGGTGCCACAAATGTTTTC+TGG | + | chr4.1:37024800-37024819 | MS.gene41198:CDS | 40.0% |
| !! | ACAGAGTACTGGTTTGAGAT+GGG | + | chr4.1:37024514-37024533 | MS.gene41198:intron | 40.0% |
| !! | ATAATCCAGAAGTGCTCCTT+CGG | + | chr4.1:37024758-37024777 | MS.gene41198:CDS | 40.0% |
| !! | CCAAGAGGTACTGAATTTGA+GGG | - | chr4.1:37025436-37025455 | None:intergenic | 40.0% |
| !! | TACAGAGTACTGGTTTGAGA+TGG | + | chr4.1:37024513-37024532 | MS.gene41198:intron | 40.0% |
| !! | TCCAAGAGGTACTGAATTTG+AGG | - | chr4.1:37025437-37025456 | None:intergenic | 40.0% |
| !! | TCTACTTTTGTCGCAAGCAA+TGG | + | chr4.1:37025575-37025594 | MS.gene41198:intron | 40.0% |
| !! | TCTTCAGGTTGCTTTATCCA+TGG | + | chr4.1:37026749-37026768 | MS.gene41198:CDS | 40.0% |
| !!! | ATGGGATGGTTTTGTCCTTT+TGG | + | chr4.1:37024532-37024551 | MS.gene41198:intron | 40.0% |
| !!! | ATTCCCGTTCTGTTTTTGAG+GGG | + | chr4.1:37024575-37024594 | MS.gene41198:intron | 40.0% |
| !!! | CTGTTTTTGAGGGGTTACAT+AGG | + | chr4.1:37024584-37024603 | MS.gene41198:intron | 40.0% |
| !!! | TGGGATGGTTTTGTCCTTTT+GGG | + | chr4.1:37024533-37024552 | MS.gene41198:intron | 40.0% |
| AAGAAAATCCAGTGCTTCCC+AGG | - | chr4.1:37026238-37026257 | None:intergenic | 45.0% | |
| AAGAATGGCTTAGCTGAGTC+AGG | - | chr4.1:37026094-37026113 | None:intergenic | 45.0% | |
| ACAAAGTTCCAGCAAGAGGA+TGG | - | chr4.1:37026781-37026800 | None:intergenic | 45.0% | |
| ACGGCTCTCATTTGTGAACA+AGG | - | chr4.1:37025885-37025904 | None:intergenic | 45.0% | |
| AGATAACCGGAATTTCTCGG+CGG | - | chr4.1:37022690-37022709 | None:intergenic | 45.0% | |
| AGGCTAATGACATCTCCGAA+TGG | - | chr4.1:37025696-37025715 | None:intergenic | 45.0% | |
| ATAGGGGGTGGATGAATATG+TGG | + | chr4.1:37023685-37023704 | MS.gene41198:intron | 45.0% | |
| CATTTGTGGCACCTTGAACT+AGG | - | chr4.1:37024795-37024814 | None:intergenic | 45.0% | |
| CCAGCTTCAAAAGCTAAAGG+TGG | + | chr4.1:37025968-37025987 | MS.gene41198:intron | 45.0% | |
| CCCTCAAATTCAGTACCTCT+TGG | + | chr4.1:37025433-37025452 | MS.gene41198:intron | 45.0% | |
| CGCCAACTAAGAAAGCAGTT+TGG | - | chr4.1:37025810-37025829 | None:intergenic | 45.0% | |
| GAAAGATAATGCAGCAGCAC+AGG | - | chr4.1:37025996-37026015 | None:intergenic | 45.0% | |
| GCTCCAATCCACTCCTAAAT+GGG | + | chr4.1:37024981-37025000 | MS.gene41198:intron | 45.0% | |
| GGGTACTACATCAACCATTC+AGG | + | chr4.1:37026034-37026053 | MS.gene41198:intron | 45.0% | |
| TGCCCACTCTATCATAGTAG+AGG | - | chr4.1:37025197-37025216 | None:intergenic | 45.0% | |
| ! | CAAATGACTGACTCCAGAGT+TGG | - | chr4.1:37023917-37023936 | None:intergenic | 45.0% |
| ! | CAAGGTGGATTTGGATTTGC+TGG | + | chr4.1:37024884-37024903 | MS.gene41198:intron | 45.0% |
| ! | TGGTTGATGTAGTACCCTGA+AGG | - | chr4.1:37026031-37026050 | None:intergenic | 45.0% |
| !! | AGAGAGAGCATCGAGATAAC+CGG | - | chr4.1:37022703-37022722 | None:intergenic | 45.0% |
| !! | AGGATGGGTTTTCCACTTTC+AGG | - | chr4.1:37023882-37023901 | None:intergenic | 45.0% |
| !! | AGTACTGGTTTGAGATGGGA+TGG | + | chr4.1:37024518-37024537 | MS.gene41198:intron | 45.0% |
| !!! | CCACCTTTAGCTTTTGAAGC+TGG | - | chr4.1:37025971-37025990 | None:intergenic | 45.0% |
| !!! | TGTTTTGATGCTACAGGCCT+TGG | + | chr4.1:37022831-37022850 | MS.gene41198:intron | 45.0% |
| AATTCGCCGCCGAGAAATTC+CGG | + | chr4.1:37022681-37022700 | MS.gene41198:CDS | 50.0% | |
| ATGCTCAGTGTCTCTGAACC+TGG | + | chr4.1:37024171-37024190 | MS.gene41198:intron | 50.0% | |
| CAAATGAGAGCCGTATCCTC+TGG | + | chr4.1:37025891-37025910 | MS.gene41198:intron | 50.0% | |
| CAAGAGGATGGCCAATACCA+TGG | - | chr4.1:37026769-37026788 | None:intergenic | 50.0% | |
| CAATTGCATGTGTCGGACAG+CGG | + | chr4.1:37023133-37023152 | MS.gene41198:intron | 50.0% | |
| CGCTCCAATCCACTCCTAAA+TGG | + | chr4.1:37024980-37024999 | MS.gene41198:intron | 50.0% | |
| CTAGGGCAGATGAATACCGA+AGG | - | chr4.1:37024777-37024796 | None:intergenic | 50.0% | |
| CTGACACTGGCATATCGTAC+TGG | + | chr4.1:37023074-37023093 | MS.gene41198:intron | 50.0% | |
| CTGATAGGGTATACCTGGAG+AGG | - | chr4.1:37025497-37025516 | None:intergenic | 50.0% | |
| GAAACACAACGGACCATCCA+TGG | - | chr4.1:37023826-37023845 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGTCGGGTACAT+TGG | - | chr4.1:37026204-37026223 | None:intergenic | 50.0% |
| ! | AGTGGGCATTGTGCCATGTT+TGG | + | chr4.1:37025209-37025228 | MS.gene41198:intron | 50.0% |
| ! | CATGACGAACAGCTCTAGTC+GGG | - | chr4.1:37026212-37026231 | None:intergenic | 50.0% |
| ! | GCATGACGAACAGCTCTAGT+CGG | - | chr4.1:37026213-37026232 | None:intergenic | 50.0% |
| !! | GAATACCGAAGGAGCACTTC+TGG | - | chr4.1:37024766-37024785 | None:intergenic | 50.0% |
| !! | GAGGTTGATGATCGAGCCAA+AGG | + | chr4.1:37022910-37022929 | MS.gene41198:CDS | 50.0% |
| !! | GCAGAGGCGTAATTTGTTGC+AGG | + | chr4.1:37022864-37022883 | MS.gene41198:CDS | 50.0% |
| ACGGTCTTCATGCAGACACC+AGG | + | chr4.1:37026643-37026662 | MS.gene41198:intron | 55.0% | |
| AGCTGTTCGTCATGCTGCCT+GGG | + | chr4.1:37026218-37026237 | MS.gene41198:CDS | 55.0% | |
| CCTCTGCGACGAATTTGCCA+AGG | - | chr4.1:37022851-37022870 | None:intergenic | 55.0% | |
| CCTTGGCAAATTCGTCGCAG+AGG | + | chr4.1:37022848-37022867 | MS.gene41198:CDS | 55.0% | |
| ! | CGACTTTTCCAGCTGCAGAG+AGG | - | chr4.1:37025759-37025778 | None:intergenic | 55.0% |
| ! | TACAGGTTGGGCAGTACCCT+CGG | + | chr4.1:37026710-37026729 | MS.gene41198:intron | 55.0% |
| !! | GGTATTGGCCATCCTCTTGC+TGG | + | chr4.1:37026770-37026789 | MS.gene41198:CDS | 55.0% |
| CACGGACACGACACTGACAC+TGG | + | chr4.1:37023061-37023080 | MS.gene41198:intron | 60.0% | |
| GAGCTGTTCGTCATGCTGCC+TGG | + | chr4.1:37026217-37026236 | MS.gene41198:CDS | 60.0% | |
| GTCGGGTACATTGGACCACC+AGG | - | chr4.1:37026195-37026214 | None:intergenic | 60.0% | |
| TCTCGGCGGCGAATTAGCGT+CGG | - | chr4.1:37022676-37022695 | None:intergenic | 60.0% | |
| ! | TCATGCTGCCTGGGAAGCAC+TGG | + | chr4.1:37026227-37026246 | MS.gene41198:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 37022669 | 37026888 | 37022669 | ID=MS.gene41198 |
| chr4.1 | mRNA | 37022669 | 37026888 | 37022669 | ID=MS.gene41198.t1;Parent=MS.gene41198 |
| chr4.1 | exon | 37022669 | 37022749 | 37022669 | ID=MS.gene41198.t1.exon1;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37022669 | 37022749 | 37022669 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37022847 | 37022931 | 37022847 | ID=MS.gene41198.t1.exon2;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37022847 | 37022931 | 37022847 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37023775 | 37023971 | 37023775 | ID=MS.gene41198.t1.exon3;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37023775 | 37023971 | 37023775 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37024739 | 37024821 | 37024739 | ID=MS.gene41198.t1.exon4;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37024739 | 37024821 | 37024739 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37025279 | 37025324 | 37025279 | ID=MS.gene41198.t1.exon5;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37025279 | 37025324 | 37025279 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37025446 | 37025502 | 37025446 | ID=MS.gene41198.t1.exon6;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37025446 | 37025502 | 37025446 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37025634 | 37025688 | 37025634 | ID=MS.gene41198.t1.exon7;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37025634 | 37025688 | 37025634 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37025767 | 37025867 | 37025767 | ID=MS.gene41198.t1.exon8;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37025767 | 37025867 | 37025767 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37025972 | 37026035 | 37025972 | ID=MS.gene41198.t1.exon9;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37025972 | 37026035 | 37025972 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37026130 | 37026263 | 37026130 | ID=MS.gene41198.t1.exon10;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37026130 | 37026263 | 37026130 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| chr4.1 | exon | 37026715 | 37026888 | 37026715 | ID=MS.gene41198.t1.exon11;Parent=MS.gene41198.t1 |
| chr4.1 | CDS | 37026715 | 37026888 | 37026715 | ID=cds.MS.gene41198.t1;Parent=MS.gene41198.t1 |
| Gene Sequence |
| Protein sequence |
