AlfalfaGEDB | MS.gene051190

M. sativa cultivar XinJiangDaYe / MS.gene051190

KEGG: K08064
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005667 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016602 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090575 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02045.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051190.t1	AFK49645.1	97.9	235	5	0	1	235	1	235	3.50E-125	457.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051190.t1	Q93ZH2	47.0	185	90	4	26	206	129	309	4.7e-30	132.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051190.t1	I3TAV3	97.9	235	5	0	1	235	1	235	2.5e-125	457.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene051190.t1	TF	NF-YA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051190	MS.gene052333	0.823249	1.53E-53	-1.69E-46
MS.gene051190	MS.gene05423	0.80387	2.84E-49	-1.69E-46
MS.gene051190	MS.gene054291	-0.841447	4.73E-58	-1.69E-46
MS.gene051190	MS.gene054467	0.81266	3.79E-51	-1.69E-46
MS.gene051190	MS.gene054468	0.818476	1.92E-52	-1.69E-46
MS.gene051190	MS.gene055455	-0.811383	7.20E-51	-1.69E-46
MS.gene051190	MS.gene060122	-0.805151	1.53E-49	-1.69E-46
MS.gene051190	MS.gene066335	0.805301	1.43E-49	-1.69E-46
MS.gene051190	MS.gene067402	0.818263	2.15E-52	-1.69E-46
MS.gene051190	MS.gene068014	-0.807487	4.93E-50	-1.69E-46
MS.gene051190	MS.gene072397	-0.851276	9.86E-61	-1.69E-46
MS.gene051190	MS.gene073016	-0.809147	2.18E-50	-1.69E-46
MS.gene051190	MS.gene074184	-0.802597	5.20E-49	-1.69E-46
MS.gene051190	MS.gene07876	0.824958	6.09E-54	-1.69E-46
MS.gene051190	MS.gene08125	-0.82656	2.54E-54	-1.69E-46
MS.gene051190	MS.gene22534	0.945918	1.24E-104	-1.69E-46
MS.gene051190	MS.gene24229	0.800125	1.67E-48	-1.69E-46
MS.gene051190	MS.gene24642	0.817049	4.03E-52	-1.69E-46
MS.gene051190	MS.gene24651	0.821244	4.48E-53	-1.69E-46
MS.gene051190	MS.gene25151	0.809795	1.59E-50	-1.69E-46
MS.gene051190	MS.gene26899	0.806458	8.15E-50	-1.69E-46
MS.gene051190	MS.gene29086	0.822246	2.62E-53	-1.69E-46
MS.gene051190	MS.gene29848	0.812653	3.80E-51	-1.69E-46
MS.gene051190	MS.gene32231	0.808807	2.58E-50	-1.69E-46
MS.gene051190	MS.gene32874	0.806559	7.76E-50	-1.69E-46
MS.gene051190	MS.gene37086	0.820942	5.25E-53	-1.69E-46
MS.gene051190	MS.gene37481	0.842802	2.07E-58	-1.69E-46
MS.gene051190	MS.gene37722	-0.809292	2.03E-50	-1.69E-46
MS.gene051190	MS.gene38111	-0.829395	5.27E-55	-1.69E-46
MS.gene051190	MS.gene38269	-0.822158	2.75E-53	-1.69E-46
MS.gene051190	MS.gene41198	-0.800229	1.59E-48	-1.69E-46
MS.gene051190	MS.gene41347	0.800321	1.52E-48	-1.69E-46
MS.gene051190	MS.gene43372	0.806293	8.83E-50	-1.69E-46
MS.gene051190	MS.gene50745	0.811251	7.69E-51	-1.69E-46
MS.gene051190	MS.gene53321	0.805956	1.04E-49	-1.69E-46
MS.gene051190	MS.gene54858	0.81244	4.24E-51	-1.69E-46
MS.gene051190	MS.gene58547	0.81107	8.42E-51	-1.69E-46
MS.gene051190	MS.gene58608	-0.805928	1.05E-49	-1.69E-46
MS.gene051190	MS.gene58638	0.800469	1.42E-48	-1.69E-46
MS.gene051190	MS.gene58802	0.813853	2.07E-51	-1.69E-46
MS.gene051190	MS.gene59607	0.808897	2.47E-50	-1.69E-46
MS.gene051190	MS.gene59840	0.805481	1.31E-49	-1.69E-46
MS.gene051190	MS.gene68999	0.807027	6.18E-50	-1.69E-46
MS.gene051190	MS.gene74216	-0.804209	2.41E-49	-1.69E-46
MS.gene051190	MS.gene74367	0.811988	5.31E-51	-1.69E-46
MS.gene051190	MS.gene76148	0.823399	1.41E-53	-1.69E-46
MS.gene051190	MS.gene77781	0.805479	1.31E-49	-1.69E-46
MS.gene051190	MS.gene79723	0.815858	7.45E-52	-1.69E-46
MS.gene051190	MS.gene80641	0.801903	7.23E-49	-1.69E-46
MS.gene051190	MS.gene82321	0.809965	1.46E-50	-1.69E-46
MS.gene051190	MS.gene82962	0.802517	5.40E-49	-1.69E-46
MS.gene051190	MS.gene83623	0.800778	1.23E-48	-1.69E-46
MS.gene051190	MS.gene90231	-0.808347	3.24E-50	-1.69E-46
MS.gene051190	MS.gene93172	0.800476	1.42E-48	-1.69E-46
MS.gene051190	MS.gene98169	0.817213	3.71E-52	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051190.t1	MTR_2g041090	97.872	235	5	0	1	235	1	235	8.29e-175	479
MS.gene051190.t1	MTR_8g019540	47.423	194	91	6	11	204	103	285	5.22e-45	153
MS.gene051190.t1	MTR_2g099490	50.331	151	61	4	6	145	108	255	1.09e-38	137
MS.gene051190.t1	MTR_2g099490	52.143	140	59	3	6	145	108	239	1.48e-37	134
MS.gene051190.t1	MTR_3g061510	53.731	134	45	5	23	156	123	239	4.44e-36	130
MS.gene051190.t1	MTR_3g061510	53.731	134	45	5	23	156	143	259	5.53e-36	130
MS.gene051190.t1	MTR_8g037270	54.472	123	49	3	33	153	114	231	3.13e-35	127
MS.gene051190.t1	MTR_2g030170	53.774	106	46	2	59	162	95	199	2.30e-30	112
MS.gene051190.t1	MTR_2g030170	53.774	106	46	2	59	162	128	232	5.49e-30	112
MS.gene051190.t1	MTR_1g056530	45.775	142	61	3	5	145	105	231	1.68e-29	112
MS.gene051190.t1	MTR_7g106450	52.500	120	39	5	32	150	134	236	6.02e-29	111

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene051190.t1	AT1G72830	47.027	185	90	4	26	206	129	309	2.30e-41	144
MS.gene051190.t1	AT1G72830	46.774	186	90	5	26	206	129	310	1.41e-39	139
MS.gene051190.t1	AT1G54160	68.367	98	29	1	47	142	145	242	1.56e-38	136
MS.gene051190.t1	AT1G17590	61.947	113	32	3	32	142	133	236	1.78e-38	136
MS.gene051190.t1	AT1G17590	61.947	113	32	3	32	142	133	236	1.78e-38	136
MS.gene051190.t1	AT1G17590	61.947	113	32	3	32	142	133	236	1.78e-38	136
MS.gene051190.t1	AT1G17590	61.947	113	32	3	32	142	133	236	1.78e-38	136
MS.gene051190.t1	AT3G14020	62.626	99	37	0	48	146	141	239	2.62e-35	127
MS.gene051190.t1	AT3G14020	62.626	99	37	0	48	146	141	239	2.62e-35	127
MS.gene051190.t1	AT1G30500	56.364	110	44	3	32	141	58	163	6.74e-34	120
MS.gene051190.t1	AT1G30500	56.364	110	40	3	32	141	58	159	7.91e-34	120
MS.gene051190.t1	AT2G34720	51.613	124	53	4	19	138	38	158	1.40e-33	120
MS.gene051190.t1	AT2G34720	46.575	146	65	4	25	168	11	145	3.18e-33	118
MS.gene051190.t1	AT2G34720	46.575	146	65	4	25	168	11	145	3.18e-33	118
MS.gene051190.t1	AT5G12840	53.271	107	45	2	33	139	131	232	2.74e-32	119
MS.gene051190.t1	AT5G12840	53.271	107	45	2	33	139	131	232	2.74e-32	119
MS.gene051190.t1	AT5G12840	53.271	107	45	2	33	139	132	233	2.95e-32	119
MS.gene051190.t1	AT5G12840	53.271	107	45	2	33	139	132	233	2.95e-32	119
MS.gene051190.t1	AT5G12840	53.271	107	45	2	33	139	132	233	2.95e-32	119
MS.gene051190.t1	AT3G20910	49.587	121	54	4	33	151	126	241	1.29e-30	115
MS.gene051190.t1	AT1G72830	41.622	185	75	5	26	206	129	284	1.27e-27	107
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	23	95	5.10e-25	97.4
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	23	95	5.10e-25	97.4
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	69	141	1.33e-24	97.4
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	118	190	1.48e-24	98.6
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	118	190	1.48e-24	98.6
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	118	190	1.48e-24	98.6
MS.gene051190.t1	AT5G06510	64.474	76	22	2	64	137	118	190	1.48e-24	98.6
MS.gene051190.t1	AT3G05690	49.123	114	37	4	29	137	102	199	5.24e-24	97.8
MS.gene051190.t1	AT3G05690	49.123	114	37	4	29	137	139	236	9.81e-24	97.4

Find 48 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGTCACTGGTTCACATTC+TGG	0.240648	2.3:+48770523	MS.gene051190:CDS
ACTAATGAACCAGCGAAAAT+TGG	0.269126	2.3:-48769728	None:intergenic
CAGCCAGAGCACATGTTTCT+TGG	0.297173	2.3:+48770682	MS.gene051190:CDS
CATGCTTTGAATAGAGTTAG+AGG	0.318785	2.3:+48770448	MS.gene051190:CDS
GCGAAAATTGGATCACTATA+AGG	0.333039	2.3:-48769716	None:intergenic
GAGCAATTGAACTCGGTATC+AGG	0.378172	2.3:-48769571	None:intergenic
CCTAAAACTGAAACTGTTGC+TGG	0.404257	2.3:-48770659	None:intergenic
TTGAATAGAGTTAGAGGATC+TGG	0.407085	2.3:+48770454	MS.gene051190:CDS
TCAAATGTTGCCTCAAATGA+TGG	0.414655	2.3:+48769937	MS.gene051190:CDS
TGCAGTGGAGGACTCGCATT+TGG	0.418965	2.3:+48770739	MS.gene051190:CDS
CTCTATTCAAAGCATGTTTG+TGG	0.437986	2.3:-48770441	None:intergenic
GCTGTTTGGTGCTTAGAAAT+CGG	0.443184	2.3:-48770480	None:intergenic
TGGCGAGATTCGTGAAGATA+TGG	0.445004	2.3:-48770421	None:intergenic
ATCATTTGAGGCAACATTTG+AGG	0.451884	2.3:-48769935	None:intergenic
CCACTTGATCTTGCACAAGA+TGG	0.459081	2.3:+48769986	MS.gene051190:CDS
ATTAGACTCTGAAAGCTGTT+TGG	0.461146	2.3:-48770494	None:intergenic
GATGGAAGATATGTTATCTC+TGG	0.468775	2.3:-48770608	None:intergenic
CACTTGATCTTGCACAAGAT+GGG	0.471002	2.3:+48769987	MS.gene051190:CDS
AGCAACGCGCTTCTGTTGTC+CGG	0.486636	2.3:+48770770	MS.gene051190:CDS
TCTTGGAAACTCTCCAAACA+TGG	0.497227	2.3:+48770699	MS.gene051190:CDS
CCCTGACAACAATTATCAAA+AGG	0.501288	2.3:+48770546	MS.gene051190:CDS
TTTCCAAGAAACATGTGCTC+TGG	0.515589	2.3:-48770685	None:intergenic
GGATGATTCAAAGAGAGAAA+AGG	0.526180	2.3:-48769550	None:intergenic
AAAGGAAGATCCTTCAGAGA+TGG	0.545453	2.3:+48770564	MS.gene051190:CDS
CAAATGTTGCCTCAAATGAT+GGG	0.554653	2.3:+48769938	MS.gene051190:CDS
TCTAATGCAGAATTTGTCAC+TGG	0.556177	2.3:+48770511	MS.gene051190:CDS
AGTTGATCATAATCACTCAA+TGG	0.558578	2.3:+48769597	MS.gene051190:CDS
TGATGACTTTCCATCTCTGA+AGG	0.561649	2.3:-48770574	None:intergenic
CCGATCGGAACAACTTGTGA+TGG	0.564255	2.3:-48770626	None:intergenic
GATGCTAATCCCATCATTTG+AGG	0.565976	2.3:-48769947	None:intergenic
AAGTGGTAATGCAACTCTAG+TGG	0.571902	2.3:-48769969	None:intergenic
CTTGGAAACTCTCCAAACAT+GGG	0.573579	2.3:+48770700	MS.gene051190:CDS
GGAGGAGCACCACAATGCAG+TGG	0.581886	2.3:+48770724	MS.gene051190:CDS
AGTGGAGGACTCGCATTTGG+CGG	0.584913	2.3:+48770742	MS.gene051190:CDS
CCATCTTGTGCAAGATCAAG+TGG	0.592935	2.3:-48769986	None:intergenic
CCATCACAAGTTGTTCCGAT+CGG	0.593385	2.3:+48770626	MS.gene051190:CDS
TTGGAAACTCTCCAAACATG+GGG	0.601862	2.3:+48770701	MS.gene051190:CDS
AATACCATGGTATACTGAGA+AGG	0.610675	2.3:+48770032	MS.gene051190:CDS
AACTTGTGAGCAATTGAACT+CGG	0.618219	2.3:-48769578	None:intergenic
GGAGCACCACAATGCAGTGG+AGG	0.620324	2.3:+48770727	MS.gene051190:CDS
GTCAATGCAAAACAATACCA+TGG	0.632585	2.3:+48770019	MS.gene051190:CDS
GGAAACTCTCCAAACATGGG+GGG	0.636980	2.3:+48770703	MS.gene051190:CDS
AATAGAGTTAGAGGATCTGG+TGG	0.657703	2.3:+48770457	MS.gene051190:CDS
GTCGCCTTCTCAGTATACCA+TGG	0.679853	2.3:-48770036	None:intergenic
GCGAGTCCTCCACTGCATTG+TGG	0.686798	2.3:-48770733	None:intergenic
TGGAAACTCTCCAAACATGG+GGG	0.690180	2.3:+48770702	MS.gene051190:CDS
AAAACACTTACAACAGCATG+CGG	0.692250	2.3:-48769761	None:intergenic
ACAATCACGAGCTAAGCTTG+AGG	0.693616	2.3:+48770057	MS.gene051190:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGTAAACTATTCAATAAAAC+AGG	-	chr2.3:48770381-48770400	None:intergenic	20.0%
!!!	ATACTAGTTTATATGCTATA+AGG	-	chr2.3:48770152-48770171	None:intergenic	20.0%
!	AAAAAGTAAAGTTCAAAGCA+TGG	-	chr2.3:48770119-48770138	None:intergenic	25.0%
!	CAAAATGTCATGTTATTACA+TGG	+	chr2.3:48770325-48770344	MS.gene051190:intron	25.0%
!	GTATGTAAAACTTCTGTATT+TGG	+	chr2.3:48769619-48769638	MS.gene051190:intron	25.0%
!!	GATTTTATATAACCATCCAA+GGG	+	chr2.3:48770245-48770264	MS.gene051190:intron	25.0%
!!	TGATTTTATATAACCATCCA+AGG	+	chr2.3:48770244-48770263	MS.gene051190:intron	25.0%
!!!	GAACTTTACTTTTTTCATTC+AGG	+	chr2.3:48770125-48770144	MS.gene051190:intron	25.0%
!!!	GGTGAAATTGTTATTTGAAA+GGG	+	chr2.3:48770346-48770365	MS.gene051190:intron	25.0%
!!!	TGGTGAAATTGTTATTTGAA+AGG	+	chr2.3:48770345-48770364	MS.gene051190:intron	25.0%
!!!	TGTTTTGCATTGACATAAAT+GGG	-	chr2.3:48770013-48770032	None:intergenic	25.0%
!!!	TTGTTTTGCATTGACATAAA+TGG	-	chr2.3:48770014-48770033	None:intergenic	25.0%
	AGTTGATCATAATCACTCAA+TGG	+	chr2.3:48769597-48769616	MS.gene051190:CDS	30.0%
	TTTCTCGTTACAATCTCAAA+AGG	-	chr2.3:48770220-48770239	None:intergenic	30.0%
!!	CCTTTTGATAATTGTTGTCA+GGG	-	chr2.3:48770549-48770568	None:intergenic	30.0%
!!	TCCTTTTGATAATTGTTGTC+AGG	-	chr2.3:48770550-48770569	None:intergenic	30.0%
!!!	TATGTTATCTCTGGTTTTTG+AGG	-	chr2.3:48770602-48770621	None:intergenic	30.0%
	AAAACACTTACAACAGCATG+CGG	-	chr2.3:48769764-48769783	None:intergenic	35.0%
	AACTTGTGAGCAATTGAACT+CGG	-	chr2.3:48769581-48769600	None:intergenic	35.0%
	AATACCATGGTATACTGAGA+AGG	+	chr2.3:48770032-48770051	MS.gene051190:CDS	35.0%
	AATTCTACCACTTGTCATCA+CGG	-	chr2.3:48770286-48770305	None:intergenic	35.0%
	ACTAATGAACCAGCGAAAAT+TGG	-	chr2.3:48769731-48769750	None:intergenic	35.0%
	CAAATGTTGCCTCAAATGAT+GGG	+	chr2.3:48769938-48769957	MS.gene051190:CDS	35.0%
	CCCTGACAACAATTATCAAA+AGG	+	chr2.3:48770546-48770565	MS.gene051190:CDS	35.0%
	CTCTATTCAAAGCATGTTTG+TGG	-	chr2.3:48770444-48770463	None:intergenic	35.0%
	GATGGAAGATATGTTATCTC+TGG	-	chr2.3:48770611-48770630	None:intergenic	35.0%
	GCGAAAATTGGATCACTATA+AGG	-	chr2.3:48769719-48769738	None:intergenic	35.0%
	GGATGATTCAAAGAGAGAAA+AGG	-	chr2.3:48769553-48769572	None:intergenic	35.0%
	GTCAATGCAAAACAATACCA+TGG	+	chr2.3:48770019-48770038	MS.gene051190:CDS	35.0%
	TCAAATGTTGCCTCAAATGA+TGG	+	chr2.3:48769937-48769956	MS.gene051190:CDS	35.0%
	TCTAATGCAGAATTTGTCAC+TGG	+	chr2.3:48770511-48770530	MS.gene051190:CDS	35.0%
	TTGAATAGAGTTAGAGGATC+TGG	+	chr2.3:48770454-48770473	MS.gene051190:CDS	35.0%
!	ATCATTTGAGGCAACATTTG+AGG	-	chr2.3:48769938-48769957	None:intergenic	35.0%
!	ATCTCAAAAGGTAAGAGTGT+AGG	-	chr2.3:48770208-48770227	None:intergenic	35.0%
!	ATTAGACTCTGAAAGCTGTT+TGG	-	chr2.3:48770497-48770516	None:intergenic	35.0%
!	CATGCTTTGAATAGAGTTAG+AGG	+	chr2.3:48770448-48770467	MS.gene051190:CDS	35.0%
!	TATAGTGATCCAATTTTCGC+TGG	+	chr2.3:48769719-48769738	MS.gene051190:CDS	35.0%
	AAAGGAAGATCCTTCAGAGA+TGG	+	chr2.3:48770564-48770583	MS.gene051190:CDS	40.0%
	AATAGAGTTAGAGGATCTGG+TGG	+	chr2.3:48770457-48770476	MS.gene051190:CDS	40.0%
	ATTCTACCACTTGTCATCAC+GGG	-	chr2.3:48770285-48770304	None:intergenic	40.0%
	CACTTGATCTTGCACAAGAT+GGG	+	chr2.3:48769987-48770006	MS.gene051190:CDS	40.0%
	CCTAAAACTGAAACTGTTGC+TGG	-	chr2.3:48770662-48770681	None:intergenic	40.0%
	CTTGGAAACTCTCCAAACAT+GGG	+	chr2.3:48770700-48770719	MS.gene051190:CDS	40.0%
	GATGCTAATCCCATCATTTG+AGG	-	chr2.3:48769950-48769969	None:intergenic	40.0%
	TCTTGGAAACTCTCCAAACA+TGG	+	chr2.3:48770699-48770718	MS.gene051190:CDS	40.0%
	TGATGACTTTCCATCTCTGA+AGG	-	chr2.3:48770577-48770596	None:intergenic	40.0%
	TTGGAAACTCTCCAAACATG+GGG	+	chr2.3:48770701-48770720	MS.gene051190:CDS	40.0%
	TTTCCAAGAAACATGTGCTC+TGG	-	chr2.3:48770688-48770707	None:intergenic	40.0%
!	AAGTGGTAATGCAACTCTAG+TGG	-	chr2.3:48769972-48769991	None:intergenic	40.0%
!	AGTTATTGTCGTCCGTTTTC+AGG	+	chr2.3:48769673-48769692	MS.gene051190:intron	40.0%
!	CCAGCAACAGTTTCAGTTTT+AGG	+	chr2.3:48770659-48770678	MS.gene051190:CDS	40.0%
!	GTATCCAAGTTTTTCATGCG+TGG	+	chr2.3:48770168-48770187	MS.gene051190:intron	40.0%
!!	GCTGTTTGGTGCTTAGAAAT+CGG	-	chr2.3:48770483-48770502	None:intergenic	40.0%
!!	TTTGTCACTGGTTCACATTC+TGG	+	chr2.3:48770523-48770542	MS.gene051190:CDS	40.0%
	ACAATCACGAGCTAAGCTTG+AGG	+	chr2.3:48770057-48770076	MS.gene051190:CDS	45.0%
	CATGAGTCTGAGCCTGAAAA+CGG	-	chr2.3:48769688-48769707	None:intergenic	45.0%
	CCACTTGATCTTGCACAAGA+TGG	+	chr2.3:48769986-48770005	MS.gene051190:CDS	45.0%
	CCATCACAAGTTGTTCCGAT+CGG	+	chr2.3:48770626-48770645	MS.gene051190:CDS	45.0%
	CCATCTTGTGCAAGATCAAG+TGG	-	chr2.3:48769989-48770008	None:intergenic	45.0%
	GAGCAATTGAACTCGGTATC+AGG	-	chr2.3:48769574-48769593	None:intergenic	45.0%
	GCTGGAAAAACATGTCCGAT+CGG	-	chr2.3:48770644-48770663	None:intergenic	45.0%
	TAACCATCCAAGGGTGAACA+AGG	+	chr2.3:48770254-48770273	MS.gene051190:intron	45.0%
	TGCTCCACGCATGAAAAACT+TGG	-	chr2.3:48770175-48770194	None:intergenic	45.0%
	TGGAAACTCTCCAAACATGG+GGG	+	chr2.3:48770702-48770721	MS.gene051190:CDS	45.0%
	TGGCGAGATTCGTGAAGATA+TGG	-	chr2.3:48770424-48770443	None:intergenic	45.0%
	CAGCCAGAGCACATGTTTCT+TGG	+	chr2.3:48770682-48770701	MS.gene051190:CDS	50.0%
	CCGATCGGAACAACTTGTGA+TGG	-	chr2.3:48770629-48770648	None:intergenic	50.0%
	GAACCTTGTTCACCCTTGGA+TGG	-	chr2.3:48770260-48770279	None:intergenic	50.0%
	GGAAACTCTCCAAACATGGG+GGG	+	chr2.3:48770703-48770722	MS.gene051190:CDS	50.0%
	GTCGCCTTCTCAGTATACCA+TGG	-	chr2.3:48770039-48770058	None:intergenic	50.0%
	AACTCTCCAAACATGGGGGG+AGG	+	chr2.3:48770706-48770725	MS.gene051190:CDS	55.0%
	AGCAACGCGCTTCTGTTGTC+CGG	+	chr2.3:48770770-48770789	MS.gene051190:CDS	55.0%
	AGTGGAGGACTCGCATTTGG+CGG	+	chr2.3:48770742-48770761	MS.gene051190:CDS	55.0%
	CTACCACTTGTCATCACGGG+AGG	-	chr2.3:48770282-48770301	None:intergenic	55.0%
	GGAGGAACCTTGTTCACCCT+TGG	-	chr2.3:48770264-48770283	None:intergenic	55.0%
	GTTCCTCCCGTGATGACAAG+TGG	+	chr2.3:48770276-48770295	MS.gene051190:intron	55.0%
	TGCAGTGGAGGACTCGCATT+TGG	+	chr2.3:48770739-48770758	MS.gene051190:CDS	55.0%
	GCGAGTCCTCCACTGCATTG+TGG	-	chr2.3:48770736-48770755	None:intergenic	60.0%
!	GGAGCACCACAATGCAGTGG+AGG	+	chr2.3:48770727-48770746	MS.gene051190:CDS	60.0%
!!	GGAGGAGCACCACAATGCAG+TGG	+	chr2.3:48770724-48770743	MS.gene051190:CDS	60.0%
	GGTGCTCCTCCCCCCATGTT+TGG	-	chr2.3:48770715-48770734	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	48769544	48770795	48769544	ID=MS.gene051190
chr2.3	mRNA	48769544	48770795	48769544	ID=MS.gene051190.t1;Parent=MS.gene051190
chr2.3	exon	48769544	48769618	48769544	ID=MS.gene051190.t1.exon1;Parent=MS.gene051190.t1
chr2.3	CDS	48769544	48769618	48769544	ID=cds.MS.gene051190.t1;Parent=MS.gene051190.t1
chr2.3	exon	48769695	48769772	48769695	ID=MS.gene051190.t1.exon2;Parent=MS.gene051190.t1
chr2.3	CDS	48769695	48769772	48769695	ID=cds.MS.gene051190.t1;Parent=MS.gene051190.t1
chr2.3	exon	48769929	48770108	48769929	ID=MS.gene051190.t1.exon3;Parent=MS.gene051190.t1
chr2.3	CDS	48769929	48770108	48769929	ID=cds.MS.gene051190.t1;Parent=MS.gene051190.t1
chr2.3	exon	48770421	48770795	48770421	ID=MS.gene051190.t1.exon4;Parent=MS.gene051190.t1
chr2.3	CDS	48770421	48770795	48770421	ID=cds.MS.gene051190.t1;Parent=MS.gene051190.t1

Gene Sequence

>MS.gene051190

ATGAAGCCTTTTCTCTCTTTGAATCATCCTGATACCGAGTTCAATTGCTCACAAGTTGATCATAATCACTCAATGGTATGTAAAACTTCTGTATTTGGATTTTTTTGCTTCAACTTTTAGTAACGAAGCAGTTATTGTCGTCCGTTTTCAGGCTCAGACTCATGCTCATTATCCTTATAGTGATCCAATTTTCGCTGGTTCATTAGTTGCTTACGCACCGCATGCTGTTGTAAGTGTTTTGTCTAGTAATATATATCTCTTCATGAATGCGCTATTAGCACTTTTTGCTGCTTGATTTTGTCGTAATGAAATGTTCGTTGAGTTTCTTATTGAATTTCTTTTGTATAATAGTATCTTAATATGTCAATGTTTTTTAATGTTTTAGAATCAACCTCAAATGTTGCCTCAAATGATGGGATTAGCATCCACTAGAGTTGCATTACCACTTGATCTTGCACAAGATGGGCCCATTTATGTCAATGCAAAACAATACCATGGTATACTGAGAAGGCGACAATCACGAGCTAAGCTTGAGGCACAGAACAAACTCATCAAAAATCGTAAAGTATGTTCCATGCTTTGAACTTTACTTTTTTCATTCAGGACCTTATAGCATATAAACTAGTATCCAAGTTTTTCATGCGTGGAGCAGAAAAATGTTCCTACACTCTTACCTTTTGAGATTGTAACGAGAAATTTCTGATTTTATATAACCATCCAAGGGTGAACAAGGTTCCTCCCGTGATGACAAGTGGTAGAATTAAAATAAGCTCGTGTTACACAAAATGTCATGTTATTACATGGTGAAATTGTTATTTGAAAGGGAATGTGTTGCCTGTTTTATTGAATAGTTTACTCATCGTTTAATTTGATGCAGCCATATCTTCACGAATCTCGCCACAAACATGCTTTGAATAGAGTTAGAGGATCTGGTGGCCGATTTCTAAGCACCAAACAGCTTTCAGAGTCTAATGCAGAATTTGTCACTGGTTCACATTCTGGCCCTGACAACAATTATCAAAAGGAAGATCCTTCAGAGATGGAAAGTCATCATTCCTCAAAAACCAGAGATAACATATCTTCCATCACAAGTTGTTCCGATCGGACATGTTTTTCCAGCAACAGTTTCAGTTTTAGGCAGCCAGAGCACATGTTTCTTGGAAACTCTCCAAACATGGGGGGAGGAGCACCACAATGCAGTGGAGGACTCGCATTTGGCGGAACAAAGCAACGCGCTTCTGTTGTCCGGTGA

Protein sequence

>MS.gene051190.t1

MKPFLSLNHPDTEFNCSQVDHNHSMAQTHAHYPYSDPIFAGSLVAYAPHAVNQPQMLPQMMGLASTRVALPLDLAQDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKNRKPYLHESRHKHALNRVRGSGGRFLSTKQLSESNAEFVTGSHSGPDNNYQKEDPSEMESHHSSKTRDNISSITSCSDRTCFSSNSFSFRQPEHMFLGNSPNMGGGAPQCSGGLAFGGTKQRASVVR