AlfalfaGEDB | MS.gene42017

M. sativa cultivar XinJiangDaYe / MS.gene42017

KEGG: K00430
GO: GO:0003674 GO:0003824 GO:0004601 GO:0005488 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0016209 GO:0016491 GO:0016684 GO:0020037 GO:0046906 GO:0048037 GO:0050896 GO:0055114 GO:0097159 GO:1901363
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42017.t1	RHN51306.1	92.1	152	12	0	1	152	33	184	5.70E-74	287

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42017.t1	Q96520	49.0	143	68	2	13	152	17	157	3.5e-32	139.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42017.t1	A0A072UAE2	92.1	152	12	0	1	152	1	152	4.1e-74	287.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049265	MS.gene42017	0.840052	1.10E-57	-1.69E-46
MS.gene049425	MS.gene42017	0.820909	5.35E-53	-1.69E-46
MS.gene050380	MS.gene42017	0.80591	1.06E-49	-1.69E-46
MS.gene050529	MS.gene42017	-0.830473	2.88E-55	-1.69E-46
MS.gene050809	MS.gene42017	0.871339	7.37E-67	-1.69E-46
MS.gene050971	MS.gene42017	-0.813582	2.38E-51	-1.69E-46
MS.gene051632	MS.gene42017	0.805505	1.29E-49	-1.69E-46
MS.gene051907	MS.gene42017	0.850905	1.25E-60	-1.69E-46
MS.gene05233	MS.gene42017	0.801715	7.90E-49	-1.69E-46
MS.gene052702	MS.gene42017	0.819671	1.03E-52	-1.69E-46
MS.gene052805	MS.gene42017	0.81516	1.07E-51	-1.69E-46
MS.gene054290	MS.gene42017	0.916	3.01E-85	-1.69E-46
MS.gene055206	MS.gene42017	-0.802096	6.60E-49	-1.69E-46
MS.gene055601	MS.gene42017	0.807497	4.91E-50	-1.69E-46
MS.gene056330	MS.gene42017	0.803288	3.74E-49	-1.69E-46
MS.gene056691	MS.gene42017	0.806417	8.31E-50	-1.69E-46
MS.gene056856	MS.gene42017	0.81077	9.77E-51	-1.69E-46
MS.gene057544	MS.gene42017	0.843715	1.18E-58	-1.69E-46
MS.gene058158	MS.gene42017	0.85945	4.10E-63	-1.69E-46
MS.gene058218	MS.gene42017	0.802461	5.55E-49	-1.69E-46
MS.gene058928	MS.gene42017	-0.803547	3.31E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42017.t1	MTR_6g043240	92.105	152	12	0	1	152	1	152	7.88e-101	294
MS.gene42017.t1	MTR_6g043280	62.733	161	57	2	1	159	1	160	3.06e-65	202
MS.gene42017.t1	MTR_6g043460	51.235	162	70	2	1	159	1	156	1.21e-49	163
MS.gene42017.t1	MTR_4g114210	47.748	111	56	1	42	152	21	129	6.76e-29	108
MS.gene42017.t1	MTR_2g084080	45.614	114	58	2	42	152	25	137	2.71e-28	107
MS.gene42017.t1	MTR_2g084090	43.939	132	65	3	24	152	12	137	3.81e-28	106
MS.gene42017.t1	MTR_1g086490	42.149	121	66	2	42	159	30	149	7.24e-28	106
MS.gene42017.t1	MTR_1g086320	42.149	121	66	2	42	159	30	149	1.19e-27	105
MS.gene42017.t1	MTR_2g084110	43.860	114	60	2	42	152	25	137	6.16e-27	103
MS.gene42017.t1	MTR_2g084000	38.667	150	76	3	6	152	2	138	6.49e-27	103
MS.gene42017.t1	MTR_5g017850	44.167	120	63	2	36	152	21	139	1.44e-26	102
MS.gene42017.t1	MTR_2g008710	44.248	113	61	1	40	152	25	135	3.07e-26	101
MS.gene42017.t1	MTR_2g067440	44.248	113	59	2	42	152	60	170	3.10e-26	102
MS.gene42017.t1	MTR_5g017860	44.167	120	63	2	36	152	21	139	3.69e-26	101
MS.gene42017.t1	MTR_5g016010	38.000	150	82	3	15	159	6	149	5.94e-26	100
MS.gene42017.t1	MTR_8g075100	42.373	118	63	2	42	156	26	141	9.61e-26	100
MS.gene42017.t1	MTR_4g029170	35.811	148	90	3	16	159	1	147	1.70e-25	99.8
MS.gene42017.t1	MTR_2g084010	43.243	111	59	2	45	152	28	137	2.16e-25	99.4
MS.gene42017.t1	MTR_1g077000	41.228	114	62	2	42	152	39	150	2.62e-25	99.4
MS.gene42017.t1	MTR_2g084020	42.982	114	61	2	42	152	25	137	2.89e-25	99.0
MS.gene42017.t1	MTR_4g132490	42.975	121	65	2	39	155	24	144	4.64e-25	98.6
MS.gene42017.t1	MTR_5g022870	41.667	120	65	2	40	156	21	138	1.38e-24	97.1
MS.gene42017.t1	MTR_0155s0040	37.607	117	68	2	41	154	26	140	1.88e-24	96.7
MS.gene42017.t1	MTR_4g087965	35.833	120	72	1	38	152	38	157	2.99e-24	96.7
MS.gene42017.t1	MTR_1g025980	42.373	118	63	2	38	152	20	135	3.09e-24	96.3
MS.gene42017.t1	MTR_2g078280	42.857	119	55	3	42	152	76	189	3.12e-24	97.4
MS.gene42017.t1	MTR_3g072260	36.364	143	78	4	8	147	1	133	3.64e-24	92.0
MS.gene42017.t1	MTR_2g437770	40.541	111	64	1	42	152	50	158	4.88e-24	96.3
MS.gene42017.t1	MTR_3g094650	35.570	149	83	3	14	159	9	147	8.95e-24	95.1
MS.gene42017.t1	MTR_4g125940	41.964	112	63	2	42	152	28	138	9.85e-24	95.1
MS.gene42017.t1	MTR_5g021060	40.678	118	64	2	46	159	34	149	1.69e-23	94.4
MS.gene42017.t1	MTR_2g078610	42.017	119	56	3	42	152	76	189	1.90e-23	95.1
MS.gene42017.t1	MTR_5g074710	37.209	129	74	4	37	160	20	146	5.21e-23	93.2
MS.gene42017.t1	MTR_4g029180	33.784	148	93	3	16	159	1	147	5.99e-23	92.8
MS.gene42017.t1	MTR_2g077990	41.176	119	57	3	42	152	76	189	7.55e-23	93.6
MS.gene42017.t1	MTR_4g074980	38.843	121	70	2	42	159	25	144	8.51e-23	91.3
MS.gene42017.t1	MTR_3g072190	37.162	148	80	4	8	152	1	138	9.75e-23	92.4
MS.gene42017.t1	MTR_4g030890	38.843	121	68	3	46	162	104	222	1.17e-22	93.2
MS.gene42017.t1	MTR_5g049280	34.899	149	84	3	11	156	11	149	1.20e-22	92.4
MS.gene42017.t1	MTR_4g074980	38.843	121	70	2	42	159	25	144	1.25e-22	91.7
MS.gene42017.t1	MTR_3g092990	41.525	118	65	2	42	156	26	142	1.33e-22	92.0
MS.gene42017.t1	MTR_2g088770	40.708	113	63	2	42	152	26	136	1.34e-22	92.0
MS.gene42017.t1	MTR_4g074990	38.843	121	70	2	42	159	24	143	2.35e-22	90.9
MS.gene42017.t1	MTR_4g127670	38.333	120	72	1	42	159	24	143	3.04e-22	90.9
MS.gene42017.t1	MTR_5g083860	38.017	121	71	2	42	159	31	150	4.56e-22	90.5
MS.gene42017.t1	MTR_4g031140	36.800	125	73	3	42	162	28	150	4.81e-22	90.9
MS.gene42017.t1	MTR_7g086870	38.393	112	68	1	42	152	22	133	5.01e-22	90.1
MS.gene42017.t1	MTR_6g027440	37.500	120	70	2	36	152	15	132	7.94e-22	89.7
MS.gene42017.t1	MTR_4g074995	38.843	121	70	2	42	159	24	143	7.97e-22	89.7
MS.gene42017.t1	MTR_4g083710	38.843	121	70	2	42	159	27	146	1.01e-21	89.7
MS.gene42017.t1	MTR_1g009750	39.200	125	72	2	42	162	27	151	1.18e-21	89.4
MS.gene42017.t1	MTR_5g014100	40.984	122	66	3	42	159	26	145	1.52e-21	89.4
MS.gene42017.t1	MTR_1g022970	40.164	122	69	2	41	159	45	165	1.54e-21	89.4
MS.gene42017.t1	MTR_2g008160	37.500	112	67	2	42	152	24	133	1.72e-21	86.7
MS.gene42017.t1	MTR_4g046713	34.932	146	78	3	10	152	7	138	1.79e-21	89.0
MS.gene42017.t1	MTR_5g074760	35.156	128	78	3	37	160	20	146	1.84e-21	89.0
MS.gene42017.t1	MTR_7g086820	39.344	122	69	2	36	154	14	133	2.20e-21	88.6
MS.gene42017.t1	MTR_4g095450	39.024	123	70	2	42	159	27	149	2.28e-21	88.6
MS.gene42017.t1	MTR_1g054205	36.667	120	71	2	37	152	19	137	2.76e-21	88.6
MS.gene42017.t1	MTR_2g029815	39.683	126	70	3	37	159	24	146	3.05e-21	88.6
MS.gene42017.t1	MTR_4g132110	35.099	151	85	4	11	158	9	149	5.51e-21	87.8
MS.gene42017.t1	MTR_1g038680	37.288	118	69	2	46	159	33	149	6.42e-21	87.4
MS.gene42017.t1	MTR_1g115900	33.974	156	86	4	7	159	5	146	6.75e-21	87.4
MS.gene42017.t1	MTR_8g076820	38.462	117	68	2	46	159	34	149	8.81e-21	87.0
MS.gene42017.t1	MTR_2g008160	37.500	112	67	2	42	152	24	133	1.31e-20	85.9
MS.gene42017.t1	MTR_5g074740	35.156	128	78	3	37	160	20	146	1.40e-20	86.7
MS.gene42017.t1	MTR_1g090760	35.652	115	70	1	42	152	28	142	1.42e-20	86.7
MS.gene42017.t1	MTR_2g040000	38.655	119	71	2	35	152	22	139	1.56e-20	86.7
MS.gene42017.t1	MTR_2g029860	41.228	114	63	2	42	152	29	141	1.89e-20	86.7
MS.gene42017.t1	MTR_7g072480	39.474	114	65	2	42	152	24	136	1.97e-20	85.9
MS.gene42017.t1	MTR_1g101830	38.596	114	65	2	42	152	27	138	1.98e-20	86.3
MS.gene42017.t1	MTR_2g008160	37.500	112	67	2	42	152	24	133	1.99e-20	86.3
MS.gene42017.t1	MTR_7g107520	41.667	108	58	2	42	146	25	130	2.48e-20	85.9
MS.gene42017.t1	MTR_5g074970	39.669	121	69	2	42	159	30	149	2.82e-20	85.9
MS.gene42017.t1	MTR_4g029200	37.815	119	70	2	37	152	41	158	2.82e-20	85.9
MS.gene42017.t1	MTR_3g094630	36.242	149	82	3	14	159	9	147	3.21e-20	85.5
MS.gene42017.t1	MTR_2g029830	39.130	115	64	2	42	152	28	140	3.83e-20	85.5
MS.gene42017.t1	MTR_3g466200	37.719	114	67	2	42	152	25	137	4.05e-20	85.1
MS.gene42017.t1	MTR_4g133800	39.091	110	65	1	43	152	42	149	4.99e-20	85.1
MS.gene42017.t1	MTR_2g029750	40.146	137	67	4	20	152	16	141	6.05e-20	85.1
MS.gene42017.t1	MTR_1g066640	35.000	120	73	2	42	158	27	144	6.84e-20	84.7
MS.gene42017.t1	MTR_1g066710	33.333	120	75	2	42	158	27	144	7.58e-20	84.7
MS.gene42017.t1	MTR_4g132110	35.714	140	77	4	11	147	9	138	1.03e-19	84.3
MS.gene42017.t1	MTR_7g093370	34.932	146	78	4	11	152	50	182	1.91e-19	84.0
MS.gene42017.t1	MTR_3g094670	34.899	149	84	3	14	159	9	147	1.92e-19	83.6
MS.gene42017.t1	MTR_3g105790	34.746	118	75	1	38	155	21	136	2.21e-19	83.2
MS.gene42017.t1	MTR_4g114220	48.810	84	35	1	66	149	27	102	3.27e-19	79.3
MS.gene42017.t1	MTR_2g029820	40.496	121	66	3	42	159	29	146	4.23e-19	82.8
MS.gene42017.t1	MTR_7g026990	36.752	117	70	2	46	159	35	150	5.99e-19	82.0
MS.gene42017.t1	MTR_2g067450	39.655	116	62	3	42	152	11	123	1.09e-18	81.3
MS.gene42017.t1	MTR_1g066380	31.707	123	79	2	39	158	24	144	1.12e-18	81.3
MS.gene42017.t1	MTR_4g122640	36.066	122	72	3	42	159	38	157	1.36e-18	81.3
MS.gene42017.t1	MTR_2g029850	39.167	120	69	3	42	159	29	146	1.38e-18	81.3
MS.gene42017.t1	MTR_7g029030	34.167	120	77	1	42	159	25	144	1.74e-18	80.9
MS.gene42017.t1	MTR_5g074860	35.772	123	74	3	42	160	29	150	1.96e-18	80.1
MS.gene42017.t1	MTR_2g029560	38.298	141	72	4	23	159	14	143	2.60e-18	80.5
MS.gene42017.t1	MTR_5g033470	36.937	111	67	1	42	149	73	183	3.62e-18	80.5
MS.gene42017.t1	MTR_5g074860	35.772	123	74	3	42	160	29	150	3.64e-18	80.1
MS.gene42017.t1	MTR_2g099175	35.766	137	82	3	12	147	9	140	4.84e-18	79.7
MS.gene42017.t1	MTR_2g029730	38.843	121	70	2	42	159	25	144	6.81e-18	79.3
MS.gene42017.t1	MTR_4g012865	45.588	68	34	1	42	106	77	144	7.50e-18	75.9
MS.gene42017.t1	MTR_2g029740	40.678	118	64	3	46	159	33	148	9.86e-18	79.0
MS.gene42017.t1	MTR_1g066680	35.000	120	72	3	42	158	27	143	1.33e-17	78.6
MS.gene42017.t1	MTR_2g028980	40.000	110	62	2	46	152	33	141	1.52e-17	78.6
MS.gene42017.t1	MTR_2g029910	36.364	121	73	2	42	159	30	149	4.62e-17	77.0
MS.gene42017.t1	MTR_2g029800	37.391	115	66	3	42	152	29	141	6.68e-17	76.6
MS.gene42017.t1	MTR_8g062780	33.333	111	71	1	45	152	26	136	1.08e-16	75.9
MS.gene42017.t1	MTR_6g048160	48.571	70	34	1	81	150	22	89	1.14e-16	71.2
MS.gene42017.t1	MTR_7g072510	32.800	125	80	2	38	159	16	139	1.26e-16	75.5
MS.gene42017.t1	MTR_4g029190	36.364	110	66	2	46	152	50	158	1.80e-16	75.5
MS.gene42017.t1	MTR_3g467600	34.921	126	71	4	42	160	27	148	1.45e-15	72.8
MS.gene42017.t1	MTR_1g009750	40.698	86	49	1	42	125	27	112	1.85e-15	72.4
MS.gene42017.t1	MTR_4g125940	46.154	78	40	2	76	152	7	83	4.43e-15	70.9
MS.gene42017.t1	MTR_0147s0010	35.135	111	61	2	42	152	77	176	1.11e-14	70.5
MS.gene42017.t1	MTR_3g092990	36.441	118	60	3	42	156	26	131	8.34e-13	65.1
MS.gene42017.t1	MTR_3g466180	35.714	98	57	3	42	135	31	126	1.84e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42017.t1	AT1G71695	48.951	143	68	2	13	152	17	157	2.43e-42	144
MS.gene42017.t1	AT5G22410	41.379	145	74	2	15	159	10	143	2.23e-32	118
MS.gene42017.t1	AT5G64120	41.135	141	81	1	13	153	6	144	3.21e-29	109
MS.gene42017.t1	AT2G41480	47.748	111	56	1	42	152	29	137	2.06e-28	107
MS.gene42017.t1	AT5G39580	47.788	113	57	1	40	152	23	133	3.69e-28	104
MS.gene42017.t1	AT2G34060	34.641	153	95	1	5	152	5	157	3.72e-28	107
MS.gene42017.t1	AT5G64100	45.299	117	62	1	46	162	41	155	1.00e-27	105
MS.gene42017.t1	AT5G39580	47.788	113	57	1	40	152	23	133	1.57e-27	105
MS.gene42017.t1	AT4G33420	34.615	156	86	3	4	156	10	152	1.66e-27	105
MS.gene42017.t1	AT4G33420	36.054	147	78	3	13	156	66	199	3.74e-27	105
MS.gene42017.t1	AT1G49570	43.220	118	63	2	38	152	44	160	6.27e-27	103
MS.gene42017.t1	AT5G15180	42.500	120	65	2	35	152	25	142	2.05e-26	102
MS.gene42017.t1	AT5G42180	44.444	117	60	2	39	152	20	134	3.03e-26	101
MS.gene42017.t1	AT3G21770	43.363	113	60	2	42	152	29	139	4.34e-26	101
MS.gene42017.t1	AT3G17070	38.509	161	88	4	3	159	4	157	7.51e-26	100
MS.gene42017.t1	AT2G18980	40.323	124	71	2	38	159	21	143	1.57e-25	99.8
MS.gene42017.t1	AT2G24800	44.737	114	61	1	39	152	28	139	3.02e-25	97.4
MS.gene42017.t1	AT5G14130	36.424	151	79	3	11	159	16	151	3.21e-25	99.0
MS.gene42017.t1	AT1G05260	41.525	118	65	2	37	152	21	136	4.94e-25	98.6
MS.gene42017.t1	AT5G05340	38.843	121	70	2	42	159	30	149	5.06e-25	98.6
MS.gene42017.t1	AT5G14130	36.424	151	79	3	11	159	57	192	5.11e-25	99.4
MS.gene42017.t1	AT5G24070	37.857	140	85	1	10	149	5	142	1.89e-24	97.1
MS.gene42017.t1	AT4G26010	39.024	123	70	2	35	154	15	135	3.10e-24	96.3
MS.gene42017.t1	AT4G26010	39.024	123	70	2	35	154	43	163	3.35e-24	96.7
MS.gene42017.t1	AT2G24800	44.737	114	61	1	39	152	28	139	3.44e-24	96.3
MS.gene42017.t1	AT2G43480	37.671	146	84	3	6	149	2	142	3.57e-24	96.3
MS.gene42017.t1	AT3G03670	40.000	120	67	2	36	152	17	134	4.61e-24	95.9
MS.gene42017.t1	AT4G21960	34.459	148	89	3	14	158	6	148	5.16e-24	95.9
MS.gene42017.t1	AT5G19890	43.243	111	62	1	42	152	30	139	5.24e-24	95.9
MS.gene42017.t1	AT2G39040	42.727	110	57	2	42	147	46	153	6.04e-24	95.9
MS.gene42017.t1	AT2G18140	36.364	143	87	2	13	152	6	147	6.73e-24	95.5
MS.gene42017.t1	AT5G17820	42.735	117	65	1	36	152	18	132	7.00e-24	95.1
MS.gene42017.t1	AT3G01190	42.742	124	63	3	31	152	19	136	7.21e-24	95.5
MS.gene42017.t1	AT4G30170	40.833	120	68	2	42	159	27	145	7.45e-24	95.5
MS.gene42017.t1	AT5G17820	42.735	117	65	1	36	152	71	185	9.92e-24	95.5
MS.gene42017.t1	AT1G77100	37.500	136	76	3	14	147	1	129	1.25e-23	94.7
MS.gene42017.t1	AT1G30870	42.241	116	65	1	37	152	46	159	1.47e-23	95.1
MS.gene42017.t1	AT5G06730	38.217	157	80	5	1	152	1	145	2.84e-23	94.4
MS.gene42017.t1	AT3G32980	34.899	149	82	3	7	152	7	143	3.88e-23	94.0
MS.gene42017.t1	AT1G68850	36.441	118	71	2	42	156	30	146	5.56e-23	93.2
MS.gene42017.t1	AT5G64110	41.026	117	67	1	46	162	38	152	6.28e-23	92.8
MS.gene42017.t1	AT2G22420	39.844	128	69	4	38	159	17	142	7.47e-23	92.8
MS.gene42017.t1	AT4G33870	36.842	114	67	2	42	152	68	179	1.05e-22	93.2
MS.gene42017.t1	AT3G49960	35.443	158	87	4	8	159	1	149	2.41e-22	91.3
MS.gene42017.t1	AT3G50990	35.772	123	77	1	39	159	38	160	2.70e-22	91.7
MS.gene42017.t1	AT2G18150	40.909	110	61	2	46	152	40	148	3.40e-22	91.3
MS.gene42017.t1	AT4G08780	39.823	113	66	1	42	152	24	136	3.67e-22	91.3
MS.gene42017.t1	AT5G19880	38.211	123	70	2	42	159	25	146	3.84e-22	90.9
MS.gene42017.t1	AT4G31760	40.870	115	66	1	42	156	29	141	4.64e-22	90.5
MS.gene42017.t1	AT5G51890	37.815	119	69	2	37	152	21	137	5.83e-22	90.1
MS.gene42017.t1	AT3G49120	39.823	113	66	1	42	152	32	144	6.13e-22	90.5
MS.gene42017.t1	AT4G36430	40.000	110	62	2	46	152	34	142	7.66e-22	90.1
MS.gene42017.t1	AT5G58400	37.037	135	74	3	28	159	23	149	1.64e-21	89.0
MS.gene42017.t1	AT5G66390	36.975	119	69	2	45	159	36	152	2.63e-21	88.6
MS.gene42017.t1	AT5G06720	35.294	136	75	3	20	152	19	144	3.57e-21	88.2
MS.gene42017.t1	AT4G11290	38.261	115	65	2	42	152	25	137	4.40e-21	87.8
MS.gene42017.t1	AT4G16270	37.705	122	70	3	42	159	50	169	7.00e-21	87.8
MS.gene42017.t1	AT2G38390	39.474	114	65	2	42	152	31	143	9.02e-21	87.4
MS.gene42017.t1	AT4G25980	37.391	115	69	2	39	152	68	180	9.02e-21	86.7
MS.gene42017.t1	AT3G49110	38.938	113	67	1	42	152	33	145	9.16e-21	87.4
MS.gene42017.t1	AT4G08770	38.938	113	67	1	42	152	24	136	1.71e-20	86.7
MS.gene42017.t1	AT1G44970	39.316	117	67	2	46	159	49	164	2.12e-20	86.3
MS.gene42017.t1	AT1G14550	35.099	151	82	4	12	159	8	145	2.79e-20	85.9
MS.gene42017.t1	AT4G37520	35.714	126	76	2	42	162	27	152	3.14e-20	85.5
MS.gene42017.t1	AT5G58390	40.984	122	66	3	42	159	21	140	4.41e-20	85.1
MS.gene42017.t1	AT1G05240	37.168	113	67	2	42	152	26	136	4.44e-20	85.1
MS.gene42017.t1	AT1G05250	37.168	113	67	2	42	152	26	136	4.44e-20	85.1
MS.gene42017.t1	AT4G25980	38.393	112	66	2	42	152	26	135	5.44e-20	85.1
MS.gene42017.t1	AT1G24110	36.364	121	74	1	42	159	22	142	6.88e-20	84.7
MS.gene42017.t1	AT2G37130	34.454	119	73	2	42	157	30	146	7.39e-20	84.7
MS.gene42017.t1	AT5G47000	36.364	121	74	1	42	159	33	153	9.05e-20	84.3
MS.gene42017.t1	AT2G35380	40.833	120	61	4	37	152	29	142	1.06e-19	84.3
MS.gene42017.t1	AT4G17690	35.659	129	78	2	34	159	20	146	1.09e-19	84.3
MS.gene42017.t1	AT1G14540	35.664	143	79	3	20	159	8	140	1.24e-19	84.0
MS.gene42017.t1	AT2G37130	34.483	116	71	2	45	157	2	115	1.41e-19	83.6
MS.gene42017.t1	AT5G67400	36.207	116	69	2	42	152	27	142	6.78e-19	82.0
MS.gene42017.t1	AT4G37530	35.772	123	74	2	42	159	27	149	7.13e-19	81.3
MS.gene42017.t1	AT4G37530	35.772	123	74	2	42	159	27	149	1.48e-18	81.3
MS.gene42017.t1	AT4G37520	34.127	126	75	3	42	162	27	149	1.03e-17	79.0
MS.gene42017.t1	AT1G34510	34.127	126	78	2	36	158	16	139	1.80e-17	77.8
MS.gene42017.t1	AT2G38380	37.719	114	67	2	42	152	31	143	2.35e-17	78.2
MS.gene42017.t1	AT3G28200	32.203	118	77	1	42	156	21	138	9.40e-17	75.9
MS.gene42017.t1	AT5G40150	30.579	121	81	1	42	159	32	152	5.52e-15	71.2

Find 47 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATCCTTCCACACTCTTTA+TGG	0.066029	6.4:+16888798	None:intergenic
CTTCCATGATTGCTTTGTTC+AGG	0.273834	6.4:-16889686	MS.gene42017:intron
TGAAAACCATTGATGACATT+AGG	0.315664	6.4:-16888829	MS.gene42017:CDS
TTCAAGGTTGGGACATGTTT+GGG	0.319115	6.4:+16889783	None:intergenic
GAAAACCATTGATGACATTA+GGG	0.352381	6.4:-16888828	MS.gene42017:CDS
GGTGGTTGATCTCTTTCTCC+TGG	0.361258	6.4:+16888878	None:intergenic
TCTGTTCTCATGCCTCCATT+TGG	0.376449	6.4:+16888857	None:intergenic
TTTCAAGGTTGGGACATGTT+TGG	0.387676	6.4:+16889782	None:intergenic
TTTCACTACTGGTGGGGCAT+TGG	0.400421	6.4:+16889828	None:intergenic
TGTTTGGGTAAAGAAATTAT+AGG	0.444514	6.4:+16889798	None:intergenic
CCAACCTTGAAAACATTGTA+AGG	0.446048	6.4:-16889771	MS.gene42017:CDS
TCAGACAATGGCCAAGCTCC+TGG	0.456261	6.4:-16889724	MS.gene42017:CDS
TTCATACTTCCATGCCTCTC+AGG	0.456691	6.4:-16889857	MS.gene42017:CDS
GTTCTCATGCCTCCATTTGG+TGG	0.462989	6.4:+16888860	None:intergenic
TAGGACAACCCTTTCACTAC+TGG	0.470644	6.4:+16889817	None:intergenic
TTACCTGAACAAAGCAATCA+TGG	0.472303	6.4:+16889683	None:intergenic
AGCAATCATGGAAGAAAATA+CGG	0.473199	6.4:+16889695	None:intergenic
GTGCTACTGGATGGAAGTCC+AGG	0.474173	6.4:-16888896	MS.gene42017:CDS
TATAGAGTTTACTAGGAAAA+CGG	0.474767	6.4:+16888736	None:intergenic
TTGTTTCTAAAATAGATCAA+TGG	0.480803	6.4:-16888078	MS.gene42017:intron
CAAAGAGTAGAAAGAAGTGA+TGG	0.486453	6.4:+16889906	None:intergenic
CTGTGCAGATATCACTGTCT+TGG	0.492534	6.4:-16888771	MS.gene42017:CDS
ATGTGATGGATCAGTGCTAC+TGG	0.506122	6.4:-16888909	MS.gene42017:CDS
GAAAGAGATCAACCACCAAA+TGG	0.506240	6.4:-16888872	MS.gene42017:CDS
TTACTAGGAAAACGGCTTCA+CGG	0.511374	6.4:+16888744	None:intergenic
GCAGATATCACTGTCTTGGC+TGG	0.521345	6.4:-16888767	MS.gene42017:CDS
ATTTGAACACCTTGGTGAGA+TGG	0.537451	6.4:+16889746	None:intergenic
AAGAGCCCTAATGTCATCAA+TGG	0.538416	6.4:+16888823	None:intergenic
AAGAAAATACGGAGTAAGCC+AGG	0.547031	6.4:+16889706	None:intergenic
GACAACCCTTTCACTACTGG+TGG	0.551774	6.4:+16889820	None:intergenic
TACGGAGTAAGCCAGGAGCT+TGG	0.556983	6.4:+16889713	None:intergenic
ATGCCCCACCAGTAGTGAAA+GGG	0.569803	6.4:-16889825	MS.gene42017:CDS
ATATGTATGTAGGGATGTGA+TGG	0.571667	6.4:-16888923	MS.gene42017:intron
TGGTTTGTGCCTGAGAGGCA+TGG	0.576385	6.4:+16889848	None:intergenic
GGCATTGGTTTGTGCCTGAG+AGG	0.580847	6.4:+16889843	None:intergenic
AATGCCCCACCAGTAGTGAA+AGG	0.587304	6.4:-16889826	MS.gene42017:CDS
CAAGACAGTGATATCTGCAC+AGG	0.588336	6.4:+16888772	None:intergenic
TTGTCCATAAAGAGTGTGGA+AGG	0.591374	6.4:-16888802	MS.gene42017:CDS
GAAGTATGAAGCAAATAGAA+CGG	0.592693	6.4:+16889870	None:intergenic
CAACCCTTTCACTACTGGTG+GGG	0.602899	6.4:+16889822	None:intergenic
ACAACCCTTTCACTACTGGT+GGG	0.603386	6.4:+16889821	None:intergenic
ATTGTCTGATTTGAACACCT+TGG	0.612524	6.4:+16889738	None:intergenic
GCTCTTGTCCATAAAGAGTG+TGG	0.630917	6.4:-16888806	MS.gene42017:CDS
GATGGATCAGTGCTACTGGA+TGG	0.647755	6.4:-16888905	MS.gene42017:CDS
AGAGATCAACCACCAAATGG+AGG	0.657924	6.4:-16888869	MS.gene42017:CDS
AAGGTGTTCAAATCAGACAA+TGG	0.687062	6.4:-16889736	MS.gene42017:CDS
TGTAAGGAACCATCTCACCA+AGG	0.753911	6.4:-16889755	MS.gene42017:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATATAAAATAAAAGTAAAA+TGG	+	chr6.4:16889255-16889274	None:intergenic	10.0%
!!	TTCCTTAAAAAAAAAAAAAA+GGG	-	chr6.4:16889846-16889865	MS.gene42017:CDS	10.0%
!!	TTTCCTTAAAAAAAAAAAAA+AGG	-	chr6.4:16889845-16889864	MS.gene42017:CDS	10.0%
!!!	AGTATATATATTTTGAAATT+CGG	+	chr6.4:16888453-16888472	None:intergenic	10.0%
!!!	TTATTTTATATCTCTTTTTT+TGG	-	chr6.4:16889263-16889282	MS.gene42017:intron	10.0%
!!	ATACATTACTAATAGAAAAA+AGG	-	chr6.4:16889343-16889362	MS.gene42017:intron	15.0%
!!	GAATTTCAAAATATATATAC+TGG	-	chr6.4:16888452-16888471	MS.gene42017:intron	15.0%
!!	TCCTTAAAAAAAAAAAAAAG+GGG	-	chr6.4:16889847-16889866	MS.gene42017:CDS	15.0%
!!!	AGATTATAAAAAGTTTTGTT+AGG	+	chr6.4:16888988-16889007	None:intergenic	15.0%
!!!	GTGAATAAAAATATTTTACA+CGG	+	chr6.4:16888892-16888911	None:intergenic	15.0%
!!	AAAGAGTTTAGTTATGAAAA+TGG	+	chr6.4:16889766-16889785	None:intergenic	20.0%
!!	AATGTATCAAAAAATCAGTA+GGG	+	chr6.4:16889330-16889349	None:intergenic	20.0%
!!	CCTTAAAAAAAAAAAAAAGG+GGG	-	chr6.4:16889848-16889867	MS.gene42017:CDS	20.0%
!!	TAATGTATCAAAAAATCAGT+AGG	+	chr6.4:16889331-16889350	None:intergenic	20.0%
!!	TTTAACACTGGAAATAATAT+AGG	-	chr6.4:16888593-16888612	MS.gene42017:intron	20.0%
!!!	AGTTGATATATATGTATGTA+GGG	-	chr6.4:16889031-16889050	MS.gene42017:intron	20.0%
!!!	ATATTGATATTTTTTCCCTA+TGG	+	chr6.4:16888502-16888521	None:intergenic	20.0%
!!!	ATCTATATCAAAACCTATTT+TGG	-	chr6.4:16888644-16888663	MS.gene42017:intron	20.0%
!!!	CTAGCTTTTTTTTTTTTTGA+AGG	-	chr6.4:16888555-16888574	MS.gene42017:intron	20.0%
!!!	CTCTTTTCATTATTTCAATT+TGG	-	chr6.4:16889780-16889799	MS.gene42017:CDS	20.0%
!!!	TAGTTGATATATATGTATGT+AGG	-	chr6.4:16889030-16889049	MS.gene42017:intron	20.0%
!!!	TGGTTATTTCAATTTTTTCT+AGG	+	chr6.4:16889681-16889700	None:intergenic	20.0%
!!!	TTGTTTCTAAAATAGATCAA+TGG	-	chr6.4:16889885-16889904	MS.gene42017:CDS	20.0%
!	AACGACAAATATATTAAGCA+AGG	-	chr6.4:16888764-16888783	MS.gene42017:CDS	25.0%
!	ACATCAAAAACATGATTAGT+AGG	+	chr6.4:16889304-16889323	None:intergenic	25.0%
!	ACCATTAAACAAACCAAAAT+AGG	+	chr6.4:16888660-16888679	None:intergenic	25.0%
!	ATGTATCAAAAAATCAGTAG+GGG	+	chr6.4:16889329-16889348	None:intergenic	25.0%
!	CATCAAAAACATGATTAGTA+GGG	+	chr6.4:16889303-16889322	None:intergenic	25.0%
!	GTCTCTAATATTACTTTCAA+AGG	-	chr6.4:16889720-16889739	MS.gene42017:CDS	25.0%
!	TAAAAAAAACAACTCTTTCC+AGG	-	chr6.4:16889419-16889438	MS.gene42017:intron	25.0%
!	TAAAAAAAACAACTCTTTCC+AGG	+	chr6.4:16889438-16889419	None:intergenic	25.0%
!	TATAGAGTTTACTAGGAAAA+CGG	+	chr6.4:16889230-16889249	None:intergenic	25.0%
!	TCTCTAATTGTATTTAACAC+TGG	-	chr6.4:16888581-16888600	MS.gene42017:intron	25.0%
!	TGTTTGGGTAAAGAAATTAT+AGG	+	chr6.4:16888168-16888187	None:intergenic	25.0%
!!	AAAAGGCTTAATTACACTTT+TGG	-	chr6.4:16889360-16889379	MS.gene42017:intron	25.0%
!!	CAAAAAGAGACAAAATTTTG+TGG	+	chr6.4:16889701-16889720	None:intergenic	25.0%
!!	TCTAGGCTTAATTACATTTT+TGG	+	chr6.4:16889664-16889683	None:intergenic	25.0%
!!!	AAAGAGTTGTTTTTTTTAGG+GGG	-	chr6.4:16889607-16889626	MS.gene42017:intron	25.0%
!!!	AAAGAGTTGTTTTTTTTAGG+GGG	+	chr6.4:16889626-16889607	None:intergenic	25.0%
!!!	ACCTATTTTGGTTTGTTTAA+TGG	-	chr6.4:16888656-16888675	MS.gene42017:intron	25.0%
!!!	CCCCCTTTTTTTTTTTTTTA+AGG	+	chr6.4:16889851-16889870	None:intergenic	25.0%
!!!	GAAAGAGTTGTTTTTTTTAG+GGG	-	chr6.4:16889606-16889625	MS.gene42017:intron	25.0%
!!!	GAAAGAGTTGTTTTTTTTAG+GGG	+	chr6.4:16889625-16889606	None:intergenic	25.0%
!!!	GGAAAGAGTTGTTTTTTTTA+GGG	-	chr6.4:16889605-16889624	MS.gene42017:intron	25.0%
!!!	GGAAAGAGTTGTTTTTTTTA+GGG	+	chr6.4:16889624-16889605	None:intergenic	25.0%
!!!	TACTTTTTGACTCGAAATTA+GGG	+	chr6.4:16889520-16889539	None:intergenic	25.0%
!!!	TATTTTTTTGCATGAATAGC+TGG	+	chr6.4:16888315-16888334	None:intergenic	25.0%
!!!	TGGAAAGAGTTGTTTTTTTT+AGG	-	chr6.4:16889604-16889623	MS.gene42017:intron	25.0%
!!!	TGGAAAGAGTTGTTTTTTTT+AGG	+	chr6.4:16889623-16889604	None:intergenic	25.0%
!!!	TTACTTTTTGACTCGAAATT+AGG	+	chr6.4:16889521-16889540	None:intergenic	25.0%
	AAAACCTAACGAAATTCGTA+TGG	+	chr6.4:16888736-16888755	None:intergenic	30.0%
	AAACCTAACGAAATTCGTAT+GGG	+	chr6.4:16888735-16888754	None:intergenic	30.0%
	AATGGAGTATAGAGTTTACT+AGG	+	chr6.4:16889237-16889256	None:intergenic	30.0%
	AGCAATCATGGAAGAAAATA+CGG	+	chr6.4:16888271-16888290	None:intergenic	30.0%
	AGTCAAAAAGTAAACTTAGG+GGG	-	chr6.4:16889528-16889547	MS.gene42017:intron	30.0%
	CAAAATATATATACTGGCCA+AGG	-	chr6.4:16888458-16888477	MS.gene42017:intron	30.0%
	CGAGTCAAAAAGTAAACTTA+GGG	-	chr6.4:16889526-16889545	MS.gene42017:intron	30.0%
	GAAGTATGAAGCAAATAGAA+CGG	+	chr6.4:16888096-16888115	None:intergenic	30.0%
	GAGTCAAAAAGTAAACTTAG+GGG	-	chr6.4:16889527-16889546	MS.gene42017:intron	30.0%
	TCGAGTCAAAAAGTAAACTT+AGG	-	chr6.4:16889525-16889544	MS.gene42017:intron	30.0%
	TGCAACAGAAAGTAAACTTA+GGG	-	chr6.4:16889577-16889596	MS.gene42017:intron	30.0%
	TGCAACAGAAAGTAAACTTA+GGG	+	chr6.4:16889596-16889577	None:intergenic	30.0%
	TTGCAACAGAAAGTAAACTT+AGG	-	chr6.4:16889576-16889595	MS.gene42017:intron	30.0%
	TTGCAACAGAAAGTAAACTT+AGG	+	chr6.4:16889595-16889576	None:intergenic	30.0%
!	AATGTCATCAATGGTTTTCA+AGG	+	chr6.4:16889134-16889153	None:intergenic	30.0%
!	ATCACAACTTTGGGAAATTT+AGG	-	chr6.4:16889635-16889654	MS.gene42017:intron	30.0%
!	ATTTCCCAAAGTTGTGATTT+TGG	+	chr6.4:16889633-16889652	None:intergenic	30.0%
!	GAAAACCATTGATGACATTA+GGG	-	chr6.4:16889135-16889154	MS.gene42017:intron	30.0%
!	TCACAACTTTGGGAAATTTA+GGG	-	chr6.4:16889636-16889655	MS.gene42017:intron	30.0%
!	TGAAAACCATTGATGACATT+AGG	-	chr6.4:16889134-16889153	MS.gene42017:intron	30.0%
!!	ACTTTTTGACTCGAAATTAG+GGG	+	chr6.4:16889519-16889538	None:intergenic	30.0%
!!	CTTACAATGTTTTCAAGGTT+GGG	+	chr6.4:16888194-16888213	None:intergenic	30.0%
!!	TTTGGTTTGTTTAATGGTGT+TGG	-	chr6.4:16888662-16888681	MS.gene42017:intron	30.0%
!!!	ATGGTGTTGGCTTAAAATTT+TGG	-	chr6.4:16888675-16888694	MS.gene42017:intron	30.0%
	AACCTAACGAAATTCGTATG+GGG	+	chr6.4:16888734-16888753	None:intergenic	35.0%
	ATATGTATGTAGGGATGTGA+TGG	-	chr6.4:16889040-16889059	MS.gene42017:intron	35.0%
	CAAAGAGTAGAAAGAAGTGA+TGG	+	chr6.4:16888060-16888079	None:intergenic	35.0%
	CAACAGAAAGTAAACTTAGG+GGG	-	chr6.4:16889579-16889598	MS.gene42017:intron	35.0%
	CAACAGAAAGTAAACTTAGG+GGG	+	chr6.4:16889598-16889579	None:intergenic	35.0%
	CCAACCTTGAAAACATTGTA+AGG	-	chr6.4:16888192-16888211	MS.gene42017:intron	35.0%
	GCAACAGAAAGTAAACTTAG+GGG	-	chr6.4:16889578-16889597	MS.gene42017:intron	35.0%
	GCAACAGAAAGTAAACTTAG+GGG	+	chr6.4:16889597-16889578	None:intergenic	35.0%
	TTACCTGAACAAAGCAATCA+TGG	+	chr6.4:16888283-16888302	None:intergenic	35.0%
!	AAGGTGTTCAAATCAGACAA+TGG	-	chr6.4:16888227-16888246	MS.gene42017:intron	35.0%
!	ACAACTTTGGGAAATTTAGG+GGG	-	chr6.4:16889638-16889657	MS.gene42017:intron	35.0%
!	ATCACAACTTTGGGAAACTT+AGG	+	chr6.4:16889389-16889408	None:intergenic	35.0%
!	ATTGTCTGATTTGAACACCT+TGG	+	chr6.4:16888228-16888247	None:intergenic	35.0%
!	CACAACTTTGGGAAATTTAG+GGG	-	chr6.4:16889637-16889656	MS.gene42017:intron	35.0%
!	GGTTCCTTACAATGTTTTCA+AGG	+	chr6.4:16888199-16888218	None:intergenic	35.0%
!	GTTTCCCAAAGTTGTGATTT+TGG	-	chr6.4:16889391-16889410	MS.gene42017:intron	35.0%
!	TCACAACTTTGGGAAACTTA+GGG	+	chr6.4:16889388-16889407	None:intergenic	35.0%
!!	CCTTACAATGTTTTCAAGGT+TGG	+	chr6.4:16888195-16888214	None:intergenic	35.0%
!!	CTTTTTGACTCGAAATTAGG+GGG	+	chr6.4:16889518-16889537	None:intergenic	35.0%
	AAGAAAATACGGAGTAAGCC+AGG	+	chr6.4:16888260-16888279	None:intergenic	40.0%
	AAGAGCCCTAATGTCATCAA+TGG	+	chr6.4:16889143-16889162	None:intergenic	40.0%
	ATTTGAACACCTTGGTGAGA+TGG	+	chr6.4:16888220-16888239	None:intergenic	40.0%
	CAATCCTTCCACACTCTTTA+TGG	+	chr6.4:16889168-16889187	None:intergenic	40.0%
	GAAAGAGATCAACCACCAAA+TGG	-	chr6.4:16889091-16889110	MS.gene42017:intron	40.0%
	TATTAAGCAAGGCTAGCGTA+AGG	-	chr6.4:16888775-16888794	MS.gene42017:CDS	40.0%
	TTACTAGGAAAACGGCTTCA+CGG	+	chr6.4:16889222-16889241	None:intergenic	40.0%
	TTCAAGGTTGGGACATGTTT+GGG	+	chr6.4:16888183-16888202	None:intergenic	40.0%
	TTCCCCATACGAATTTCGTT+AGG	-	chr6.4:16888729-16888748	MS.gene42017:intron	40.0%
	TTTCAAGGTTGGGACATGTT+TGG	+	chr6.4:16888184-16888203	None:intergenic	40.0%
!	AAAGCCTTTTTCCTCCTATG+CGG	+	chr6.4:16888811-16888830	None:intergenic	40.0%
!	ACAACTTTGGGAAACTTAGG+GGG	+	chr6.4:16889386-16889405	None:intergenic	40.0%
!	CACAACTTTGGGAAACTTAG+GGG	+	chr6.4:16889387-16889406	None:intergenic	40.0%
!	CTTCCATGATTGCTTTGTTC+AGG	-	chr6.4:16888277-16888296	MS.gene42017:intron	40.0%
!	TTGTCCATAAAGAGTGTGGA+AGG	-	chr6.4:16889161-16889180	MS.gene42017:intron	40.0%
	ACAACCCTTTCACTACTGGT+GGG	+	chr6.4:16888145-16888164	None:intergenic	45.0%
	AGAGATCAACCACCAAATGG+AGG	-	chr6.4:16889094-16889113	MS.gene42017:intron	45.0%
	CAAGACAGTGATATCTGCAC+AGG	+	chr6.4:16889194-16889213	None:intergenic	45.0%
	CTGTGCAGATATCACTGTCT+TGG	-	chr6.4:16889192-16889211	MS.gene42017:intron	45.0%
	GCCTGGAAAGTAAACTTAGG+GGG	+	chr6.4:16889496-16889515	None:intergenic	45.0%
	GCTCTTGTCCATAAAGAGTG+TGG	-	chr6.4:16889157-16889176	MS.gene42017:intron	45.0%
	GGCCTGGAAAGTAAACTTAG+GGG	+	chr6.4:16889497-16889516	None:intergenic	45.0%
	GGGCCTGGAAAGTAAACTTA+GGG	+	chr6.4:16889498-16889517	None:intergenic	45.0%
	GGGGCCAAAATCACAACTTT+GGG	-	chr6.4:16889626-16889645	MS.gene42017:intron	45.0%
	GGGGCCAAAATCACAACTTT+GGG	+	chr6.4:16889645-16889626	None:intergenic	45.0%
	TAACCCGCATAGGAGGAAAA+AGG	-	chr6.4:16888804-16888823	MS.gene42017:CDS	45.0%
	TAGGACAACCCTTTCACTAC+TGG	+	chr6.4:16888149-16888168	None:intergenic	45.0%
	TCTGTTCTCATGCCTCCATT+TGG	+	chr6.4:16889109-16889128	None:intergenic	45.0%
	TGTAAGGAACCATCTCACCA+AGG	-	chr6.4:16888208-16888227	MS.gene42017:intron	45.0%
	TTCATACTTCCATGCCTCTC+AGG	-	chr6.4:16888106-16888125	MS.gene42017:intron	45.0%
!	AAGCCTTTTTCCTCCTATGC+GGG	+	chr6.4:16888810-16888829	None:intergenic	45.0%
!!	ACTGGCCAAGGTTTTATCCA+TGG	-	chr6.4:16888470-16888489	MS.gene42017:intron	45.0%
!!	ATGTGATGGATCAGTGCTAC+TGG	-	chr6.4:16889054-16889073	MS.gene42017:intron	45.0%
!!	CCAAGGTTTTATCCATGGTG+GGG	-	chr6.4:16888475-16888494	MS.gene42017:intron	45.0%
!!	GCCAAGGTTTTATCCATGGT+GGG	-	chr6.4:16888474-16888493	MS.gene42017:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+TGG	-	chr6.4:16889461-16889480	MS.gene42017:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+TGG	+	chr6.4:16889480-16889461	None:intergenic	45.0%
!!	AAAAATATCAATATAAAATA+AGG	-	chr6.4:16888508-16888527	MS.gene42017:intron	5.0%
!!!	TTATTAATGATATTAATTTT+AGG	+	chr6.4:16888919-16888938	None:intergenic	5.0%
	AAGGTGCACTTAACCCGCAT+AGG	-	chr6.4:16888794-16888813	MS.gene42017:CDS	50.0%
	AATGCCCCACCAGTAGTGAA+AGG	-	chr6.4:16888137-16888156	MS.gene42017:intron	50.0%
	AGGGGGCTAAAATTGCCATG+AGG	-	chr6.4:16889545-16889564	MS.gene42017:intron	50.0%
	AGGGGGCTAATATTGCCATG+AGG	+	chr6.4:16889479-16889498	None:intergenic	50.0%
	ATGCCCCACCAGTAGTGAAA+GGG	-	chr6.4:16888138-16888157	MS.gene42017:intron	50.0%
	CAACCCTTTCACTACTGGTG+GGG	+	chr6.4:16888144-16888163	None:intergenic	50.0%
	CCCCACCATGGATAAAACCT+TGG	+	chr6.4:16888478-16888497	None:intergenic	50.0%
	GAAAGTAAACTTAGGGGGCC+TGG	-	chr6.4:16889584-16889603	MS.gene42017:intron	50.0%
	GAAAGTAAACTTAGGGGGCC+TGG	+	chr6.4:16889603-16889584	None:intergenic	50.0%
	GACAACCCTTTCACTACTGG+TGG	+	chr6.4:16888146-16888165	None:intergenic	50.0%
	GCAGATATCACTGTCTTGGC+TGG	-	chr6.4:16889196-16889215	MS.gene42017:intron	50.0%
	GCCCCCTAAGTTTACTTTCC+AGG	-	chr6.4:16889492-16889511	MS.gene42017:intron	50.0%
	GGGGCCTGGAAAGTAAACTT+AGG	+	chr6.4:16889499-16889518	None:intergenic	50.0%
	GGGGCTAAAATTGCCATGAG+GGG	-	chr6.4:16889547-16889566	MS.gene42017:intron	50.0%
	GGGGCTAATATTGCCATGAG+GGG	+	chr6.4:16889477-16889496	None:intergenic	50.0%
	GGGGGCCAAAATCACAACTT+TGG	-	chr6.4:16889625-16889644	MS.gene42017:intron	50.0%
	GGGGGCCAAAATCACAACTT+TGG	+	chr6.4:16889644-16889625	None:intergenic	50.0%
	GGGGGCTAAAATTGCCATGA+GGG	-	chr6.4:16889546-16889565	MS.gene42017:intron	50.0%
	GGGGGCTAATATTGCCATGA+GGG	+	chr6.4:16889478-16889497	None:intergenic	50.0%
	GGTGGTTGATCTCTTTCTCC+TGG	+	chr6.4:16889088-16889107	None:intergenic	50.0%
	GTTCTCATGCCTCCATTTGG+TGG	+	chr6.4:16889106-16889125	None:intergenic	50.0%
	TTTCACTACTGGTGGGGCAT+TGG	+	chr6.4:16888138-16888157	None:intergenic	50.0%
!	GATGGATCAGTGCTACTGGA+TGG	-	chr6.4:16889058-16889077	MS.gene42017:intron	50.0%
!	TATCCATGGTGGGGTCCATA+GGG	-	chr6.4:16888484-16888503	MS.gene42017:intron	50.0%
!	TTATCCATGGTGGGGTCCAT+AGG	-	chr6.4:16888483-16888502	MS.gene42017:intron	50.0%
!!	GGCCAAGGTTTTATCCATGG+TGG	-	chr6.4:16888473-16888492	MS.gene42017:intron	50.0%
	GTGCACTTAACCCGCATAGG+AGG	-	chr6.4:16888797-16888816	MS.gene42017:CDS	55.0%
	TACGGAGTAAGCCAGGAGCT+TGG	+	chr6.4:16888253-16888272	None:intergenic	55.0%
	TCAGACAATGGCCAAGCTCC+TGG	-	chr6.4:16888239-16888258	MS.gene42017:intron	55.0%
	TGACTCGAAATTAGGGGGCC+TGG	+	chr6.4:16889513-16889532	None:intergenic	55.0%
	TTTCCCTATGGACCCCACCA+TGG	+	chr6.4:16888490-16888509	None:intergenic	55.0%
!	GTGCTACTGGATGGAAGTCC+AGG	-	chr6.4:16889067-16889086	MS.gene42017:intron	55.0%
!	TGGTTTGTGCCTGAGAGGCA+TGG	+	chr6.4:16888118-16888137	None:intergenic	55.0%
!!	GGCATTGGTTTGTGCCTGAG+AGG	+	chr6.4:16888123-16888142	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	16888038	16889947	16888038	ID=MS.gene42017
chr6.4	mRNA	16888038	16889947	16888038	ID=MS.gene42017.t1;Parent=MS.gene42017
chr6.4	exon	16889687	16889947	16889687	ID=MS.gene42017.t1.exon1;Parent=MS.gene42017.t1
chr6.4	CDS	16889687	16889947	16889687	ID=cds.MS.gene42017.t1;Parent=MS.gene42017.t1
chr6.4	exon	16888748	16888933	16888748	ID=MS.gene42017.t1.exon2;Parent=MS.gene42017.t1
chr6.4	CDS	16888748	16888933	16888748	ID=cds.MS.gene42017.t1;Parent=MS.gene42017.t1
chr6.4	exon	16888038	16888085	16888038	ID=MS.gene42017.t1.exon3;Parent=MS.gene42017.t1
chr6.4	CDS	16888038	16888085	16888038	ID=cds.MS.gene42017.t1;Parent=MS.gene42017.t1

Gene Sequence

>MS.gene42017

ATGGCTAAGAATAGTGTTTCCATCACTTCTTTCTACTCTTTGCTTTTGATATCTTCCGTTCTATTTGCTTCATACTTCCATGCCTCTCAGGCACAAACCAATGCCCCACCAGTAGTGAAAGGGTTGTCCTATAATTTCTTTACCCAAACATGTCCCAACCTTGAAAACATTGTAAGGAACCATCTCACCAAGGTGTTCAAATCAGACAATGGCCAAGCTCCTGGCTTACTCCGTATTTTCTTCCATGATTGCTTTGTTCAGGTAATATATGTCACCAGCTATTCATGCAAAAAAATATCATTTACTATTTTGAGCTATATAAATTAATATTAAAGTGAAGAATAACAAAGAATGAATTGAGATTGAGTTTAGCAGAAGAGACTAGACTTATATAAAATGACGAAACAATATTCCGAATTTCAAAATATATATACTGGCCAAGGTTTTATCCATGGTGGGGTCCATAGGGAAAAAATATCAATATAAAATAAGGATTTAGTTGATATGTTATGACTTTCTAGCTTTTTTTTTTTTTGAAGGAACTCTCTAATTGTATTTAACACTGGAAATAATATAGGATCATGAAAAATATTTGACATTAGTTGTATCTATATCAAAACCTATTTTGGTTTGTTTAATGGTGTTGGCTTAAAATTTTGGAGTATGCTTTTTCAAATTCTTAGTTTTGATTTTCCCCATACGAATTTCGTTAGGTTTTTTTTTCTGAACGACAAATATATTAAGCAAGGCTAGCGTAAGGTGCACTTAACCCGCATAGGAGGAAAAAGGCTTTTTCAAAAAATATTATATCTACGCTAAAATTCATACAATAATGATTTGTGATCGATTGACCGTGTAAAATATTTTTATTCACAGTGCCTAAAATTAATATCATTAATAACTCTTATATTATTACATACAAACTTGTATATGTTCTAGTTAAGTTTCCTAACAAAACTTTTTATAATCTCTAGTTTTCTTGCATGACTTAGTAGTTGATATATATGTATGTAGGGATGTGATGGATCAGTGCTACTGGATGGAAGTCCAGGAGAAAGAGATCAACCACCAAATGGAGGCATGAGAACAGAAGCCTTGAAAACCATTGATGACATTAGGGCTCTTGTCCATAAAGAGTGTGGAAGGATTGTTTCCTGTGCAGATATCACTGTCTTGGCTGGCCGTGAAGCCGTTTTCCTAGTAAACTCTATACTCCATTTTACTTTTATTTTATATCTCTTTTTTTGGTACATAATTTTTTTCCCTACTAATCATGTTTTTGATGTTTCCCCTACTGATTTTTTGATACATTACTAATAGAAAAAAGGCTTAATTACACTTTTGGCCCCCTAAGTTTCCCAAAGTTGTGATTTTGGCCCCCTAAAAAAAACAACTCTTTCCAGGCCCCCTAAGTTTACTTTCTGTTGCAATTTTAGCCCCTCATGGCAATATTAGCCCCCTAAGTTTACTTTCCAGGCCCCCTAATTTCGAGTCAAAAAGTAAACTTAGGGGGCTAAAATTGCCATGAGGGGCTAAAATTGCAACAGAAAGTAAACTTAGGGGGCCTGGAAAGAGTTGTTTTTTTTAGGGGGCCAAAATCACAACTTTGGGAAATTTAGGGGGCCAAAAATGTAATTAAGCCTAGAAAAAATTGAAATAACCACAAAATTTTGTCTCTTTTTGTCTCTAATATTACTTTCAAAGGATTTTTGAGATGAAATTAATCCATTTTCATAACTAAACTCTTTTCATTATTTCAATTTGGTCTAGTAGTAAATATTTGTTGTATAGAGAGTAGTGCATATATTTTCCTTAAAAAAAAAAAAAAGGGGGAGTGAATATATTTATTGTTTCTAAAATAGATCAATGGCTCTAAAATAGATTTCAAGTTAGTGAAATTATTTCTTTGA

Protein sequence

>MS.gene42017.t1

MAKNSVSITSFYSLLLISSVLFASYFHASQAQTNAPPVVKGLSYNFFTQTCPNLENIVRNHLTKVFKSDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGERDQPPNGGMRTEALKTIDDIRALVHKECGRIVSCADITVLAGREAVFLINGSKIDFKLVKLFL