AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42775


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42775.t1 MTR_8g447220 93.909 394 22 2 1 394 1 392 0.0 735
MS.gene42775.t1 MTR_8g447220 95.611 319 12 2 1 319 1 317 0.0 598
MS.gene42775.t1 MTR_2g063857 74.294 354 84 2 43 394 54 402 0.0 544
MS.gene42775.t1 MTR_2g063907 75.660 341 69 4 54 391 53 382 0.0 528
MS.gene42775.t1 MTR_2g063843 73.121 346 82 3 54 399 59 393 0.0 516
MS.gene42775.t1 MTR_6g092020 71.875 352 82 4 54 399 46 386 0.0 512
MS.gene42775.t1 MTR_2g063857 75.460 326 73 2 43 366 54 374 2.11e-180 507
MS.gene42775.t1 MTR_6g092100 77.597 308 62 2 55 362 2 302 9.08e-177 495
MS.gene42775.t1 MTR_6g021730 56.701 388 130 6 28 380 75 459 2.90e-149 432
MS.gene42775.t1 MTR_7g033100 59.003 361 123 3 53 394 78 432 8.76e-148 427
MS.gene42775.t1 MTR_3g086520 60.056 358 113 5 47 380 89 440 1.38e-146 424
MS.gene42775.t1 MTR_3g086520 60.056 358 113 5 47 380 92 443 1.78e-146 424
MS.gene42775.t1 MTR_3g086520 60.056 358 113 5 47 380 92 443 1.94e-146 424
MS.gene42775.t1 MTR_3g096520 56.250 384 147 5 3 380 42 410 1.44e-145 421
MS.gene42775.t1 MTR_3g096520 56.250 384 147 5 3 380 59 427 2.19e-145 421
MS.gene42775.t1 MTR_3g096520 56.510 384 145 6 3 380 42 409 4.38e-145 420
MS.gene42775.t1 MTR_3g075530 59.944 357 118 7 44 380 57 408 1.11e-143 416
MS.gene42775.t1 MTR_8g089670 57.103 359 130 3 43 380 93 448 5.38e-143 416
MS.gene42775.t1 MTR_7g033100 65.188 293 100 1 53 345 78 368 9.52e-139 402
MS.gene42775.t1 MTR_7g081160 57.258 248 101 3 78 321 10 256 1.04e-88 278
MS.gene42775.t1 MTR_7g081170 58.721 172 60 3 102 272 81 242 8.19e-67 213
MS.gene42775.t1 MTR_2g063877 68.868 106 23 2 139 244 5 100 1.14e-39 139
MS.gene42775.t1 MTR_8g096190 30.961 281 148 10 55 314 316 571 4.97e-23 101
MS.gene42775.t1 MTR_8g096190 31.225 253 135 9 55 286 316 550 4.70e-21 95.5
MS.gene42775.t1 MTR_8g096190 32.273 220 123 7 55 264 316 519 8.28e-20 91.7
MS.gene42775.t1 MTR_1g048160 28.720 289 148 11 75 341 328 580 1.95e-19 90.9
MS.gene42775.t1 MTR_7g114100 30.469 256 129 10 75 309 166 393 1.07e-18 87.8
MS.gene42775.t1 MTR_7g114130 30.350 257 131 10 75 309 332 562 1.91e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42775.t1 AT1G79380 67.733 344 107 1 51 394 48 387 1.16e-165 471
MS.gene42775.t1 AT1G67800 60.350 343 121 1 53 380 64 406 5.18e-151 435
MS.gene42775.t1 AT1G67800 60.350 343 121 1 53 380 64 406 5.18e-151 435
MS.gene42775.t1 AT1G67800 60.350 343 121 1 53 380 64 406 5.18e-151 435
MS.gene42775.t1 AT1G67800 60.350 343 121 1 53 380 64 406 5.18e-151 435
MS.gene42775.t1 AT1G67800 60.350 343 121 1 53 380 84 426 1.06e-150 434
MS.gene42775.t1 AT5G14420 58.659 358 119 5 47 380 89 441 4.50e-144 418
MS.gene42775.t1 AT5G14420 58.659 358 119 5 47 380 89 441 4.50e-144 418
MS.gene42775.t1 AT5G14420 58.659 358 119 5 47 380 89 441 4.50e-144 418
MS.gene42775.t1 AT5G14420 58.659 358 119 5 47 380 89 441 4.50e-144 418
MS.gene42775.t1 AT3G01650 60.059 338 119 2 55 380 129 462 2.50e-142 414
MS.gene42775.t1 AT3G01650 60.059 338 119 2 55 380 129 462 2.50e-142 414
MS.gene42775.t1 AT1G67800 66.436 289 97 0 53 341 84 372 1.30e-141 410
MS.gene42775.t1 AT5G63970 60.182 329 125 3 57 380 12 339 7.51e-136 394
MS.gene42775.t1 AT5G63970 60.182 329 125 3 57 380 12 339 7.51e-136 394
MS.gene42775.t1 AT5G61910 29.900 301 153 12 55 333 1082 1346 4.59e-22 99.4
MS.gene42775.t1 AT1G24545 44.037 109 23 1 97 205 46 116 5.51e-22 92.8
MS.gene42775.t1 AT5G61900 29.154 319 165 13 37 333 299 578 8.71e-22 97.8
MS.gene42775.t1 AT5G61900 29.154 319 165 13 37 333 299 578 8.71e-22 97.8
MS.gene42775.t1 AT5G07300 30.935 278 142 13 55 309 317 567 2.60e-21 96.7
MS.gene42775.t1 AT1G08860 28.369 282 145 10 75 335 338 583 9.84e-19 88.6

Find 95 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAAGCCATTTCGATTAT+TGG 0.160616 8.2:-55242688 MS.gene42775:CDS
GTTCCAAACTTGAGTCTTTC+GGG 0.200946 8.2:-55242398 MS.gene42775:intron
CCATGGATTTGAGGAAGTTT+TGG 0.222870 8.2:-55242438 MS.gene42775:CDS
TTCAATATTCAACATCATTA+TGG 0.232391 8.2:-55245462 MS.gene42775:CDS
GCTCAAGGGCTGCTTTATAT+TGG 0.283230 8.2:+55241095 None:intergenic
TGTTCCAAACTTGAGTCTTT+CGG 0.287890 8.2:-55242399 MS.gene42775:CDS
GCCCTTGAGCTTGGATTACT+TGG 0.292933 8.2:-55241082 MS.gene42775:CDS
CAATCGCCTAAGGGTGTTTA+CGG 0.320619 8.2:-55239723 MS.gene42775:CDS
TTCAAGAGTTGTAAAATTAT+CGG 0.322301 8.2:+55245398 None:intergenic
ATCGAAATGGCTTTCTCATA+AGG 0.335804 8.2:+55242694 None:intergenic
TTGATTCCTTGTCTTGGCTT+TGG 0.337268 8.2:-55242634 MS.gene42775:CDS
ATATCCTCTCTCTATTGTTC+TGG 0.338322 8.2:-55241382 MS.gene42775:CDS
TATATGTCTGACCAATAAAA+AGG 0.346239 8.2:-55240109 MS.gene42775:CDS
AATAAAAGCCTGCATTCTAT+TGG 0.346666 8.2:-55242730 MS.gene42775:CDS
AAAGCGTGAAGCTGAATATT+CGG 0.355029 8.2:-55245556 MS.gene42775:CDS
GGTGGCATATGTCGAGAATA+AGG 0.376167 8.2:+55240880 None:intergenic
TAAGGAGCTGGAGGAGGTCT+TGG 0.379892 8.2:+55240898 None:intergenic
GAATCCTCAAATCTTATCCT+TGG 0.383285 8.2:-55242981 MS.gene42775:CDS
TCGAAATGGCTTTCTCATAA+GGG 0.384038 8.2:+55242695 None:intergenic
TTACCCGAAAGACTCAAGTT+TGG 0.391155 8.2:+55242395 None:intergenic
TTAGGCGATTGGTGATCCTT+TGG 0.406759 8.2:+55239735 None:intergenic
TGGAGTTGGTGATGGACCTT+GGG 0.408112 8.2:-55241358 MS.gene42775:CDS
ACTACGAAGGTCACAAGATA+TGG 0.410884 8.2:-55241697 MS.gene42775:intron
CCTTGTCTTGGCTTTGGTGA+TGG 0.416101 8.2:-55242628 MS.gene42775:intron
GTGATCCTTTGGCGGCATAT+CGG 0.424418 8.2:+55239746 None:intergenic
TATGTACCATTTGGTTTCGC+TGG 0.430085 8.2:+55240815 None:intergenic
TTCGATTATTGGCAAGACTT+TGG 0.431397 8.2:-55242677 MS.gene42775:CDS
TTGGAGTTGGTGATGGACCT+TGG 0.437479 8.2:-55241359 MS.gene42775:CDS
CAATAACCAACACATGGAAT+TGG 0.438745 8.2:+55241846 None:intergenic
TCAAGAGTTGTAAAATTATC+GGG 0.441302 8.2:+55245399 None:intergenic
AATCGCCTAAGGGTGTTTAC+GGG 0.446498 8.2:-55239722 MS.gene42775:CDS
TTTATTGTCTTCTCTTCTTG+AGG 0.447554 8.2:+55241649 None:intergenic
AAGCGTGAAGCTGAATATTC+GGG 0.448185 8.2:-55245555 MS.gene42775:CDS
AACGGGAAGGGCAAAGAAAA+TGG 0.450053 8.2:-55240923 MS.gene42775:CDS
GGCGATTGGTGATCCTTTGG+CGG 0.450853 8.2:+55239738 None:intergenic
TCTATTGTTCTGGTTGGAGT+TGG 0.451422 8.2:-55241372 MS.gene42775:CDS
AATTCCAAGGATAAGATTTG+AGG 0.462510 8.2:+55242977 None:intergenic
ATGGACAAAAGTCGTGCAAC+GGG 0.462578 8.2:-55240940 MS.gene42775:intron
ATGGCTTTCTCATAAGGGTT+AGG 0.466114 8.2:+55242700 None:intergenic
CCCTTGAGCTTGGATTACTT+GGG 0.466955 8.2:-55241081 MS.gene42775:intron
TTGGTTTCGCTGGTCATCCA+TGG 0.468207 8.2:+55240825 None:intergenic
TATAAAGCAGCCCTTGAGCT+TGG 0.469009 8.2:-55241091 MS.gene42775:CDS
CCTCTCTCTATTGTTCTGGT+TGG 0.471140 8.2:-55241378 MS.gene42775:CDS
AGTCTTGCCAATAATCGAAA+TGG 0.471552 8.2:+55242681 None:intergenic
GACAACTTGATTCCTTGTCT+TGG 0.477064 8.2:-55242640 MS.gene42775:CDS
TTCATCTTGCCATGGATTTG+AGG 0.481878 8.2:-55242447 MS.gene42775:CDS
AAGGATTTGGCCTTTGGATG+TGG 0.483554 8.2:-55240090 MS.gene42775:CDS
GTTCTGGTTGGAGTTGGTGA+TGG 0.484054 8.2:-55241366 MS.gene42775:CDS
ATCAAGTTGTCGTCATCAAA+AGG 0.490399 8.2:+55242652 None:intergenic
TCTATTGCAGCCTCGATCAC+TGG 0.498733 8.2:+55241890 None:intergenic
ATGCTGCTCAGAAAATGTTC+TGG 0.510850 8.2:+55240859 None:intergenic
AAAGGATCACCAATCGCCTA+AGG 0.513958 8.2:-55239733 MS.gene42775:CDS
GGTTATTGTTGCAGATGGCC+AGG 0.517879 8.2:-55241831 MS.gene42775:intron
CGTAAACACCCTTAGGCGAT+TGG 0.519030 8.2:+55239724 None:intergenic
TTCTAAACCTTCACTTCTCA+AGG 0.519105 8.2:+55243001 None:intergenic
GTGTTGGTTATTGTTGCAGA+TGG 0.521064 8.2:-55241836 MS.gene42775:CDS
GGATGACCAGCGAAACCAAA+TGG 0.534645 8.2:-55240821 MS.gene42775:intron
ATCACTGGTGCATATGAAGT+TGG 0.534886 8.2:+55241905 None:intergenic
ACAAGATATGGCAACAATGA+AGG 0.539840 8.2:-55241685 MS.gene42775:CDS
TCATGGCCAATTCCATGTGT+TGG 0.540158 8.2:-55241852 MS.gene42775:CDS
ACCCAAGTAATCCAAGCTCA+AGG 0.545582 8.2:+55241080 None:intergenic
ACGAAAAGCAATGAATGGAC+TGG 0.546910 8.2:-55242948 MS.gene42775:intron
CAGCATGCCAGCATCATCCA+TGG 0.547144 8.2:-55240842 MS.gene42775:CDS
GACATTGTTGAGAAAACTCA+TGG 0.547591 8.2:-55241869 MS.gene42775:CDS
AAATTGTCGAAATCGCGTGC+AGG 0.550617 8.2:+55241306 None:intergenic
AGATTTGATGGGAAACTCGC+AGG 0.552660 8.2:-55245583 None:intergenic
ACAAGTGCCTTGAGAAGTGA+AGG 0.554585 8.2:-55243008 MS.gene42775:CDS
TAAAAGCAATAGTTGATGCC+AGG 0.555213 8.2:-55241630 MS.gene42775:intron
CAAAAGTCGTGCAACGGGAA+GGG 0.559376 8.2:-55240935 MS.gene42775:intron
ATGCAGACCTGCAGAGATTG+TGG 0.559696 8.2:-55239788 MS.gene42775:intron
CCAAAACTTCCTCAAATCCA+TGG 0.560420 8.2:+55242438 None:intergenic
CGAGAATAAGGAGCTGGAGG+AGG 0.567814 8.2:+55240892 None:intergenic
AGGGCTGCTTTATATTGGAA+AGG 0.572206 8.2:+55241100 None:intergenic
CTGCAACAATAACCAACACA+TGG 0.572509 8.2:+55241840 None:intergenic
ACAAAAGTCGTGCAACGGGA+AGG 0.575594 8.2:-55240936 MS.gene42775:intron
GCGTATCTCCAATAGAATGC+AGG 0.576191 8.2:+55242722 None:intergenic
GGCCTTTGGATGTGGTCACA+TGG 0.577351 8.2:-55240082 MS.gene42775:intron
TGGTCATCCATGGATGATGC+TGG 0.585112 8.2:+55240835 None:intergenic
TACCATGTGACCACATCCAA+AGG 0.592224 8.2:+55240080 None:intergenic
TATGGACAAAAGTCGTGCAA+CGG 0.594214 8.2:-55240941 MS.gene42775:intron
GCTGATGATTCATCTTGCCA+TGG 0.599690 8.2:-55242455 MS.gene42775:CDS
CCCAAGTAATCCAAGCTCAA+GGG 0.605458 8.2:+55241081 None:intergenic
TTCATATGCACCAGTGATCG+AGG 0.608412 8.2:-55241900 MS.gene42775:CDS
AGATATGGCAACAATGAAGG+TGG 0.609743 8.2:-55241682 MS.gene42775:CDS
ATTGTCCGATATGCCGCCAA+AGG 0.612193 8.2:-55239751 MS.gene42775:CDS
TCTTCTTGTTGTTTAGATCG+CGG 0.619537 8.2:+55245495 None:intergenic
ATATGTCGAGAATAAGGAGC+TGG 0.623729 8.2:+55240886 None:intergenic
AAGGATCACCAATCGCCTAA+GGG 0.625121 8.2:-55239732 MS.gene42775:CDS
CTGCTCAGAAAATGTTCTGG+TGG 0.629525 8.2:+55240862 None:intergenic
CCATCACCAAAGCCAAGACA+AGG 0.630215 8.2:+55242628 None:intergenic
ATCATCCCGTAAACACCCTT+AGG 0.633326 8.2:+55239717 None:intergenic
TGTCGAGAATAAGGAGCTGG+AGG 0.660177 8.2:+55240889 None:intergenic
TAAGAAGAAGCTCTCTACGA+AGG 0.666216 8.2:-55245439 MS.gene42775:CDS
CCAACCAGAACAATAGAGAG+AGG 0.672546 8.2:+55241378 None:intergenic
AGATCGCGGTGAGAGAACTG+TGG 0.732596 8.2:+55245509 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATTAAAAAAAAAAT+TGG - chr8.2:55240753-55240772 MS.gene42775:intron 0.0%
!!! TTATTATTATTTTTTTTTAT+CGG - chr8.2:55240222-55240241 MS.gene42775:intron 0.0%
!! AAATAAAATAATACAACTAT+GGG + chr8.2:55243559-55243578 None:intergenic 10.0%
!! AATTCATTTAATTGAATAAT+TGG - chr8.2:55240159-55240178 MS.gene42775:intron 10.0%
!! TATATTTGATATTTACAAAA+AGG + chr8.2:55242143-55242162 None:intergenic 10.0%
!!! TGAACAAATTTTTTTTTTAT+CGG - chr8.2:55240120-55240139 MS.gene42775:CDS 10.0%
!!! TTTTGATATCAATAAATTTA+AGG - chr8.2:55243023-55243042 MS.gene42775:intron 10.0%
!!! TTTTTTTTTTGAAAAAACTT+AGG + chr8.2:55241364-55241383 None:intergenic 10.0%
!! AAAAATGCTTTAATATAACT+AGG + chr8.2:55244062-55244081 None:intergenic 15.0%
!! AGAAATGAAAAACTATAATT+TGG + chr8.2:55240992-55241011 None:intergenic 15.0%
!! CAAATAAAATAATACAACTA+TGG + chr8.2:55243560-55243579 None:intergenic 15.0%
!! CATTATTAACACTTAATAAA+AGG + chr8.2:55240729-55240748 None:intergenic 15.0%
!! TATATGTTTATATTAGTGTT+TGG - chr8.2:55245343-55245362 MS.gene42775:intron 15.0%
!! TTAAAAAAAAAATTGGAACA+AGG - chr8.2:55240760-55240779 MS.gene42775:intron 15.0%
!!! AAATTATCATTTCTTTTAGA+AGG + chr8.2:55240793-55240812 None:intergenic 15.0%
!!! ACTAAATAAGTTTTTCTTTT+GGG - chr8.2:55241904-55241923 MS.gene42775:CDS 15.0%
!!! CATAGTTGTATTATTTTATT+TGG - chr8.2:55243558-55243577 MS.gene42775:intron 15.0%
!!! TACATATACTCATTAAATTT+TGG - chr8.2:55245471-55245490 MS.gene42775:CDS 15.0%
!!! TATTTTGCTTTTCTAAATTA+AGG - chr8.2:55242038-55242057 MS.gene42775:intron 15.0%
!!! TGAAATAAGTCTTATATTTT+AGG - chr8.2:55241408-55241427 MS.gene42775:intron 15.0%
!!! TTTTGAATAATCAATATGTT+TGG - chr8.2:55240339-55240358 MS.gene42775:intron 15.0%
!! AAAATGCAATCTATATATGA+AGG - chr8.2:55244633-55244652 MS.gene42775:intron 20.0%
!! AAACTTATTTAGTGTATGTT+TGG + chr8.2:55241897-55241916 None:intergenic 20.0%
!! AAAGGAATTATCAACAAAAA+TGG - chr8.2:55243758-55243777 MS.gene42775:intron 20.0%
!! AATCATTTGGAAAAACAAAT+TGG + chr8.2:55240629-55240648 None:intergenic 20.0%
!! ACATGAGTAAAAATAGTTAA+TGG - chr8.2:55240414-55240433 MS.gene42775:intron 20.0%
!! AGTAAAATTTATGATGTTGT+CGG + chr8.2:55244717-55244736 None:intergenic 20.0%
!! ATCCTAAATAAATTGAGATT+AGG - chr8.2:55242221-55242240 MS.gene42775:intron 20.0%
!! ATTAAAATACAGACTTCAAT+TGG - chr8.2:55242463-55242482 MS.gene42775:CDS 20.0%
!! CATAAACAAGTTAAAACTTA+AGG - chr8.2:55241975-55241994 MS.gene42775:intron 20.0%
!! CATTGAATAACTTATGAATT+TGG - chr8.2:55241062-55241081 MS.gene42775:intron 20.0%
!! GTTAATTAAAATAACACAAG+TGG - chr8.2:55241616-55241635 MS.gene42775:intron 20.0%
!! TAATATCTAATAATCTATGC+AGG - chr8.2:55245144-55245163 MS.gene42775:intron 20.0%
!! TATACAAAAGAATTTGATGT+CGG - chr8.2:55244959-55244978 MS.gene42775:intron 20.0%
!! TATTAGTTAAATGATGCAAT+TGG + chr8.2:55240576-55240595 None:intergenic 20.0%
!! TATTTCCTAGAAGTTAATTT+GGG - chr8.2:55244529-55244548 MS.gene42775:intron 20.0%
!! TGAAAAAATTCATGAATTTG+AGG + chr8.2:55241273-55241292 None:intergenic 20.0%
!! TGAATCTTTACTTATATTTG+AGG + chr8.2:55241031-55241050 None:intergenic 20.0%
!! TTAAAACCAATCATTTCAAA+AGG + chr8.2:55242498-55242517 None:intergenic 20.0%
!! TTCAAGAGTTGTAAAATTAT+CGG + chr8.2:55239888-55239907 None:intergenic 20.0%
!! TTCAATATTCAACATCATTA+TGG - chr8.2:55239821-55239840 MS.gene42775:intron 20.0%
!! TTTATTGATATCAAAATGCA+TGG + chr8.2:55243019-55243038 None:intergenic 20.0%
!!! AAAAACAAAAAGTATATACC+TGG + chr8.2:55243473-55243492 None:intergenic 20.0%
!!! AACTTTTTTTGGTTGTTTAA+TGG - chr8.2:55239992-55240011 MS.gene42775:intron 20.0%
!!! ATTAACTATTTTTACTCATG+TGG + chr8.2:55240415-55240434 None:intergenic 20.0%
!!! ATTTGTTAAAATTTGCTGTA+TGG - chr8.2:55244279-55244298 MS.gene42775:intron 20.0%
!!! CACTAAATAAGTTTTTCTTT+TGG - chr8.2:55241903-55241922 MS.gene42775:CDS 20.0%
!!! CTTTTTGTTTTTTTGTTGTA+AGG - chr8.2:55243481-55243500 MS.gene42775:intron 20.0%
!!! TATTTTCCTTTTGAAATGAT+TGG - chr8.2:55242489-55242508 MS.gene42775:CDS 20.0%
!!! TCTTAATATTTGAAATGAGA+GGG - chr8.2:55241156-55241175 MS.gene42775:CDS 20.0%
!!! TTAATTCATGTTGTTATTGA+AGG - chr8.2:55242514-55242533 MS.gene42775:intron 20.0%
!!! TTCTTAATATTTGAAATGAG+AGG - chr8.2:55241155-55241174 MS.gene42775:CDS 20.0%
!!! TTTGTTTTATACTTGTTACA+AGG - chr8.2:55241529-55241548 MS.gene42775:intron 20.0%
! AAAAAAAGTTATCCATGGAT+TGG + chr8.2:55239982-55240001 None:intergenic 25.0%
! AAACTTAGGTGAATTTCTTT+AGG + chr8.2:55241350-55241369 None:intergenic 25.0%
! AAATCTTCCATAAAACATCA+TGG - chr8.2:55244769-55244788 MS.gene42775:intron 25.0%
! AACAATAGTGTTGTGTTTAA+TGG + chr8.2:55244581-55244600 None:intergenic 25.0%
! AACTATAAAAAACGAACCAA+CGG - chr8.2:55243823-55243842 MS.gene42775:intron 25.0%
! AATAAATCTATCACAAAGAC+TGG + chr8.2:55245116-55245135 None:intergenic 25.0%
! ACAATTTAACAGTATATACC+CGG + chr8.2:55243507-55243526 None:intergenic 25.0%
! AGATCTAAACTGTAAATTTC+TGG - chr8.2:55242434-55242453 MS.gene42775:CDS 25.0%
! ATGATCTTGATGAGTATTTA+AGG + chr8.2:55243709-55243728 None:intergenic 25.0%
! ATGATTTATTCCACAAAATG+AGG + chr8.2:55243270-55243289 None:intergenic 25.0%
! CTATTTCCTAGAAGTTAATT+TGG - chr8.2:55244528-55244547 MS.gene42775:intron 25.0%
! CTCTTAAAGTTTACTAATGT+TGG + chr8.2:55243321-55243340 None:intergenic 25.0%
! GACCTAATCTCAATTTATTT+AGG + chr8.2:55242226-55242245 None:intergenic 25.0%
! TATATGTCTGACCAATAAAA+AGG - chr8.2:55245174-55245193 MS.gene42775:intron 25.0%
! TCAAAGCAGATTTGAATATA+GGG - chr8.2:55241441-55241460 MS.gene42775:intron 25.0%
! TCAAGAGTTGTAAAATTATC+GGG + chr8.2:55239887-55239906 None:intergenic 25.0%
! TCGTTAAATAGTTGAAGAAT+TGG + chr8.2:55244868-55244887 None:intergenic 25.0%
! TGCATCTAAATATGATGAAA+CGG + chr8.2:55245276-55245295 None:intergenic 25.0%
! TTAAAACTTAAGGTTACGTT+TGG - chr8.2:55241985-55242004 MS.gene42775:intron 25.0%
! TTCAAAGCAGATTTGAATAT+AGG - chr8.2:55241440-55241459 MS.gene42775:intron 25.0%
! TTGTGGAATAAATCATAGAA+TGG - chr8.2:55243274-55243293 MS.gene42775:intron 25.0%
!! AATTAACTTCTAGGAAATAG+AGG + chr8.2:55244528-55244547 None:intergenic 25.0%
!! ACAATTAATGTTTGACTTAG+CGG + chr8.2:55243852-55243871 None:intergenic 25.0%
!! AGTTTCTTTCATATTTGTTG+AGG + chr8.2:55242703-55242722 None:intergenic 25.0%
!! ATCAATTTTCCATATTTACC+TGG + chr8.2:55243674-55243693 None:intergenic 25.0%
!! ATTTTACGAAAAGCAATGAA+TGG - chr8.2:55242330-55242349 MS.gene42775:intron 25.0%
!! GATGTTTTATGGAAGATTTT+TGG + chr8.2:55244768-55244787 None:intergenic 25.0%
!! TAATTTTACAACTCTTGAAC+AGG - chr8.2:55239889-55239908 MS.gene42775:intron 25.0%
!! TCTTTACTTATATTTGAGGT+TGG + chr8.2:55241027-55241046 None:intergenic 25.0%
!! TGAATTTCTTTAGGTACTTT+TGG + chr8.2:55241341-55241360 None:intergenic 25.0%
!! TTGAATACAAGACTTGATTT+TGG - chr8.2:55241941-55241960 MS.gene42775:intron 25.0%
!! TTTTCGTAAAATCAATTCCA+AGG + chr8.2:55242322-55242341 None:intergenic 25.0%
!!! AAAACTACATGCTTTTGTTT+AGG - chr8.2:55241197-55241216 MS.gene42775:intron 25.0%
!!! AATCCATGGATAACTTTTTT+TGG - chr8.2:55239981-55240000 MS.gene42775:intron 25.0%
!!! AATGTTTGCTTTTTGTTTCT+AGG - chr8.2:55243354-55243373 MS.gene42775:intron 25.0%
!!! ATGATTTTTTTCCCTTATAC+AGG - chr8.2:55242250-55242269 MS.gene42775:intron 25.0%
!!! ATTTAGTGTATGTTTGGTTT+TGG + chr8.2:55241891-55241910 None:intergenic 25.0%
!!! GAAAAAAATTAGCTTGTTTG+TGG - chr8.2:55240438-55240457 MS.gene42775:intron 25.0%
!!! TCACTTAAAATCACTTTTTG+TGG + chr8.2:55241309-55241328 None:intergenic 25.0%
!!! TTTAGTGTATGTTTGGTTTT+GGG + chr8.2:55241890-55241909 None:intergenic 25.0%
AACACTTAATAAAAGGCAAG+CGG + chr8.2:55240722-55240741 None:intergenic 30.0%
AATAAAAGCCTGCATTCTAT+TGG - chr8.2:55242553-55242572 MS.gene42775:intron 30.0%
AATAGTGTTGTGTTTAATGG+CGG + chr8.2:55244578-55244597 None:intergenic 30.0%
AATTCCAAGGATAAGATTTG+AGG + chr8.2:55242309-55242328 None:intergenic 30.0%
AGCAAACATTTATTAAGCCA+TGG + chr8.2:55243344-55243363 None:intergenic 30.0%
ATGTTGGTACTGCAAATTAA+CGG + chr8.2:55243305-55243324 None:intergenic 30.0%
ATTGTTGAATTGTTCTGTAG+AGG - chr8.2:55244595-55244614 MS.gene42775:intron 30.0%
ATTTATGATGTTGTCGGATA+AGG + chr8.2:55244711-55244730 None:intergenic 30.0%
CAACCAAAAAAAGTTATCCA+TGG + chr8.2:55239987-55240006 None:intergenic 30.0%
CAATATGACTTCAATGTTGA+GGG - chr8.2:55243218-55243237 MS.gene42775:intron 30.0%
GAAAAACTATAATTTGGCAC+AGG + chr8.2:55240986-55241005 None:intergenic 30.0%
GAACTAAACATACACTTAGT+TGG + chr8.2:55241862-55241881 None:intergenic 30.0%
GTACATATGATTGCAAACTA+GGG - chr8.2:55244484-55244503 MS.gene42775:intron 30.0%
GTGTGATAGGTGAAAATTAT+TGG - chr8.2:55241705-55241724 MS.gene42775:intron 30.0%
TAATACAACTATGGGAAAGT+TGG + chr8.2:55243551-55243570 None:intergenic 30.0%
TAGACACATAAATTTGCAAG+TGG + chr8.2:55240466-55240485 None:intergenic 30.0%
TAGATCAATGTTATCGATAG+CGG - chr8.2:55244738-55244757 MS.gene42775:intron 30.0%
TATTATTGCTGGCATTATCA+TGG + chr8.2:55245070-55245089 None:intergenic 30.0%
TCTGACCAATAAAAAGGATT+TGG - chr8.2:55245180-55245199 MS.gene42775:intron 30.0%
TGTATAACAACAGAATAGAC+AGG + chr8.2:55245251-55245270 None:intergenic 30.0%
TTATATCTCTAGTAGAAAGC+TGG - chr8.2:55244900-55244919 MS.gene42775:intron 30.0%
TTCTTCAACTTGAGTATCAT+AGG - chr8.2:55241650-55241669 MS.gene42775:CDS 30.0%
TTGCAATCATATGTACCATT+TGG + chr8.2:55244480-55244499 None:intergenic 30.0%
TTGTACCCAAATTAACTTCT+AGG + chr8.2:55244537-55244556 None:intergenic 30.0%
TTGTTGAATTGTTCTGTAGA+GGG - chr8.2:55244596-55244615 MS.gene42775:intron 30.0%
TTGTTGAGAGTTATTATTGC+TGG + chr8.2:55245081-55245100 None:intergenic 30.0%
TTTATTGTCTTCTCTTCTTG+AGG + chr8.2:55243637-55243656 None:intergenic 30.0%
TTTCTTCCTTCTTTGTTCTA+TGG - chr8.2:55244324-55244343 MS.gene42775:intron 30.0%
! AAAGGCCAAATCCTTTTTAT+TGG + chr8.2:55245188-55245207 None:intergenic 30.0%
! AATAAAAAGGATTTGGCCTT+TGG - chr8.2:55245187-55245206 MS.gene42775:intron 30.0%
! ATTTAGGATATGCTTAGATG+TGG + chr8.2:55242210-55242229 None:intergenic 30.0%
! TCAGCGCTTAGTTTATATTT+TGG + chr8.2:55242168-55242187 None:intergenic 30.0%
! TGTGATTAGCTATTCATGTT+TGG + chr8.2:55241575-55241594 None:intergenic 30.0%
! TGTTCTTTTTGCAATCACAT+TGG - chr8.2:55242933-55242952 MS.gene42775:intron 30.0%
! TGTTTTTCCAAATGATTCCT+AGG - chr8.2:55240632-55240651 MS.gene42775:intron 30.0%
! TTACTTATATTTGAGGTTGG+AGG + chr8.2:55241024-55241043 None:intergenic 30.0%
! TTAGTAAACTTTAAGAGCCA+TGG - chr8.2:55243324-55243343 MS.gene42775:intron 30.0%
! TTTTGTCCATAGAACAAAGA+AGG + chr8.2:55244333-55244352 None:intergenic 30.0%
!! TTATTTGGTTTGAACTACGA+AGG - chr8.2:55243573-55243592 MS.gene42775:intron 30.0%
!!! AACGTCATTCATTTTTTGTG+AGG + chr8.2:55240530-55240549 None:intergenic 30.0%
!!! AACTTTTTCATATCTTCCCA+AGG + chr8.2:55243944-55243963 None:intergenic 30.0%
!!! AAGCATGTAGTTTTGTCTTT+TGG + chr8.2:55241191-55241210 None:intergenic 30.0%
!!! ATGCTTAGATGTGGTTTTTT+AGG + chr8.2:55242201-55242220 None:intergenic 30.0%
!!! GTTATGAATGCTGATTTTGT+GGG - chr8.2:55245040-55245059 MS.gene42775:intron 30.0%
!!! TGCTTAGATGTGGTTTTTTA+GGG + chr8.2:55242200-55242219 None:intergenic 30.0%
!!! TGTTATGAATGCTGATTTTG+TGG - chr8.2:55245039-55245058 MS.gene42775:intron 30.0%
!!! TTCTTGCTTTGTTTTCTTTG+TGG - chr8.2:55239946-55239965 MS.gene42775:intron 30.0%
!!! TTGTTTTTTTGTTGTAAGGC+CGG - chr8.2:55243485-55243504 MS.gene42775:intron 30.0%
AAAGCGTGAAGCTGAATATT+CGG - chr8.2:55239727-55239746 MS.gene42775:CDS 35.0%
AACTTAAGGTTACGTTTGGA+TGG - chr8.2:55241989-55242008 MS.gene42775:intron 35.0%
AATAGAGAGAGGATATGAAC+TGG + chr8.2:55243897-55243916 None:intergenic 35.0%
ACAAAAGAATTTGATGTCGG+AGG - chr8.2:55244962-55244981 MS.gene42775:intron 35.0%
ACAAGATATGGCAACAATGA+AGG - chr8.2:55243598-55243617 MS.gene42775:intron 35.0%
ACACTTAATAAAAGGCAAGC+GGG + chr8.2:55240721-55240740 None:intergenic 35.0%
ACAGTGAGTGACAATTATTG+TGG + chr8.2:55240098-55240117 None:intergenic 35.0%
ACTTTACACGAACCCATATA+TGG + chr8.2:55243125-55243144 None:intergenic 35.0%
AGTCTTGCCAATAATCGAAA+TGG + chr8.2:55242605-55242624 None:intergenic 35.0%
ATAACAACAGAATAGACAGG+AGG + chr8.2:55245248-55245267 None:intergenic 35.0%
ATATCCTCTCTCTATTGTTC+TGG - chr8.2:55243901-55243920 MS.gene42775:intron 35.0%
ATCGAAATGGCTTTCTCATA+AGG + chr8.2:55242592-55242611 None:intergenic 35.0%
ATTCGTTCCAACACCATATA+TGG - chr8.2:55243109-55243128 MS.gene42775:intron 35.0%
CAATAACCAACACATGGAAT+TGG + chr8.2:55243440-55243459 None:intergenic 35.0%
CAATCCTTGTAAACACAACA+TGG + chr8.2:55240659-55240678 None:intergenic 35.0%
CAGTGAGTGACAATTATTGT+GGG + chr8.2:55240097-55240116 None:intergenic 35.0%
CCAATATGACTTCAATGTTG+AGG - chr8.2:55243217-55243236 MS.gene42775:intron 35.0%
CCTCAACATTGAAGTCATAT+TGG + chr8.2:55243220-55243239 None:intergenic 35.0%
GAATCCTCAAATCTTATCCT+TGG - chr8.2:55242302-55242321 MS.gene42775:intron 35.0%
GACATTGTTGAGAAAACTCA+TGG - chr8.2:55243414-55243433 MS.gene42775:intron 35.0%
GAGAAAGCCATTTCGATTAT+TGG - chr8.2:55242595-55242614 MS.gene42775:intron 35.0%
GGTACATATGATTGCAAACT+AGG - chr8.2:55244483-55244502 MS.gene42775:intron 35.0%
TAATGTAGAGCTTGTGTGAT+AGG - chr8.2:55241692-55241711 MS.gene42775:intron 35.0%
TCCACAAAATGAGGAATCAT+AGG + chr8.2:55243261-55243280 None:intergenic 35.0%
TCGAAATGGCTTTCTCATAA+GGG + chr8.2:55242591-55242610 None:intergenic 35.0%
TGTTCCAAACTTGAGTCTTT+CGG - chr8.2:55242884-55242903 MS.gene42775:intron 35.0%
TGTTGGTACTGCAAATTAAC+GGG + chr8.2:55243304-55243323 None:intergenic 35.0%
TTCCACAAGCTACTCTTATT+CGG + chr8.2:55240042-55240061 None:intergenic 35.0%
TTCGATTATTGGCAAGACTT+TGG - chr8.2:55242606-55242625 MS.gene42775:intron 35.0%
TTCGTTCCAACACCATATAT+GGG - chr8.2:55243110-55243129 MS.gene42775:intron 35.0%
TTCTAAACCTTCACTTCTCA+AGG + chr8.2:55242285-55242304 None:intergenic 35.0%
! ACCTATGATTCCTCATTTTG+TGG - chr8.2:55243257-55243276 MS.gene42775:intron 35.0%
! ATATGGTGTTGGAACGAATT+GGG + chr8.2:55243108-55243127 None:intergenic 35.0%
! ATCAAGTTGTCGTCATCAAA+AGG + chr8.2:55242634-55242653 None:intergenic 35.0%
! ATTGATTTCGCCATCCAAAA+TGG - chr8.2:55240675-55240694 MS.gene42775:intron 35.0%
! TAAAAGCAATAGTTGATGCC+AGG - chr8.2:55243653-55243672 MS.gene42775:intron 35.0%
! TACGTTTGGATGGAGAATTT+TGG - chr8.2:55241999-55242018 MS.gene42775:intron 35.0%
! TAGTTGATGCCAGGTAAATA+TGG - chr8.2:55243662-55243681 MS.gene42775:intron 35.0%
! TATATGGTGTTGGAACGAAT+TGG + chr8.2:55243109-55243128 None:intergenic 35.0%
! TCATTAGGTGGTTTTCTTTC+AGG - chr8.2:55244251-55244270 MS.gene42775:intron 35.0%
!! ATGGAGAATTTTGGAGAGTA+GGG - chr8.2:55242008-55242027 MS.gene42775:intron 35.0%
!! ATGTTTGGTTCTTCTTTCGT+AGG + chr8.2:55241560-55241579 None:intergenic 35.0%
!! TCTTCTTGTTGTTTAGATCG+CGG + chr8.2:55239791-55239810 None:intergenic 35.0%
!! TGGGTGAGTTTTAATACACT+CGG - chr8.2:55244221-55244240 MS.gene42775:intron 35.0%
!!! GCTTAGATGTGGTTTTTTAG+GGG + chr8.2:55242199-55242218 None:intergenic 35.0%
!!! TAATTCCTTTTTTCCCAGAG+CGG + chr8.2:55243748-55243767 None:intergenic 35.0%
!!! TGTTTTTTTGTTGTAAGGCC+GGG - chr8.2:55243486-55243505 MS.gene42775:intron 35.0%
AACCAATTGATCAACTGCGA+TGG + chr8.2:55242395-55242414 None:intergenic 40.0%
AAGCGTGAAGCTGAATATTC+GGG - chr8.2:55239728-55239747 MS.gene42775:CDS 40.0%
ACATGGACCTAGGAATCATT+TGG + chr8.2:55240642-55240661 None:intergenic 40.0%
ACGAAAAGCAATGAATGGAC+TGG - chr8.2:55242335-55242354 MS.gene42775:intron 40.0%
ACTACGAAGGTCACAAGATA+TGG - chr8.2:55243586-55243605 MS.gene42775:intron 40.0%
AGATATGGCAACAATGAAGG+TGG - chr8.2:55243601-55243620 MS.gene42775:intron 40.0%
AGCTACTCTTATTCGGTCAA+CGG + chr8.2:55240035-55240054 None:intergenic 40.0%
AGGCACTTGTAACCTGTATA+AGG + chr8.2:55242265-55242284 None:intergenic 40.0%
AGGTCCATGTTGTGTTTACA+AGG - chr8.2:55240652-55240671 MS.gene42775:intron 40.0%
ATATGTCGAGAATAAGGAGC+TGG + chr8.2:55244400-55244419 None:intergenic 40.0%
ATCACTGGTGCATATGAAGT+TGG + chr8.2:55243381-55243400 None:intergenic 40.0%
ATCCATCGCAGTTGATCAAT+TGG - chr8.2:55242390-55242409 MS.gene42775:intron 40.0%
ATGCTGCTCAGAAAATGTTC+TGG + chr8.2:55244427-55244446 None:intergenic 40.0%
ATGGCTTTCTCATAAGGGTT+AGG + chr8.2:55242586-55242605 None:intergenic 40.0%
ATGGGTTCGTGTAAAGTCTT+AGG - chr8.2:55243128-55243147 MS.gene42775:intron 40.0%
CAGTAAAATGAATCCGCTCT+GGG - chr8.2:55243732-55243751 MS.gene42775:intron 40.0%
CCAAAACTTCCTCAAATCCA+TGG + chr8.2:55242848-55242867 None:intergenic 40.0%
CTGCAACAATAACCAACACA+TGG + chr8.2:55243446-55243465 None:intergenic 40.0%
GACAACTTGATTCCTTGTCT+TGG - chr8.2:55242643-55242662 MS.gene42775:CDS 40.0%
GCAGTAGTAGTGACATTACT+TGG - chr8.2:55244018-55244037 MS.gene42775:intron 40.0%
GGATTTCGTTTACCAATCCA+TGG - chr8.2:55239967-55239986 MS.gene42775:intron 40.0%
GGCACTTGTAACCTGTATAA+GGG + chr8.2:55242264-55242283 None:intergenic 40.0%
GTAGATACTATCTACTCTCC+TGG - chr8.2:55240070-55240089 MS.gene42775:intron 40.0%
GTTCCAAACTTGAGTCTTTC+GGG - chr8.2:55242885-55242904 MS.gene42775:intron 40.0%
GTTGGTACTGCAAATTAACG+GGG + chr8.2:55243303-55243322 None:intergenic 40.0%
TAAGAAGAAGCTCTCTACGA+AGG - chr8.2:55239844-55239863 MS.gene42775:intron 40.0%
TATGGACAAAAGTCGTGCAA+CGG - chr8.2:55244342-55244361 MS.gene42775:intron 40.0%
TATTGTGAGAGCTTTGCCTT+CGG - chr8.2:55243157-55243176 MS.gene42775:intron 40.0%
TGTAAACACAACATGGACCT+AGG + chr8.2:55240652-55240671 None:intergenic 40.0%
TTACCCGAAAGACTCAAGTT+TGG + chr8.2:55242891-55242910 None:intergenic 40.0%
TTCATCTTGCCATGGATTTG+AGG - chr8.2:55242836-55242855 MS.gene42775:intron 40.0%
TTGATTCCTTGTCTTGGCTT+TGG - chr8.2:55242649-55242668 MS.gene42775:CDS 40.0%
! AAAGCAGCTTCTTTTGCAGA+AGG + chr8.2:55244138-55244157 None:intergenic 40.0%
! AAGCAGCTTCTTTTGCAGAA+GGG + chr8.2:55244137-55244156 None:intergenic 40.0%
! ACACTCGGTAGCTTTTCATT+AGG - chr8.2:55244236-55244255 MS.gene42775:intron 40.0%
! ACGCGATTTCGACAATTTTC+AGG - chr8.2:55243982-55244001 MS.gene42775:intron 40.0%
! AGGGCTGCTTTATATTGGAA+AGG + chr8.2:55244186-55244205 None:intergenic 40.0%
! AGTGCCATGATGTTTTATGG+CGG + chr8.2:55244776-55244795 None:intergenic 40.0%
! CACAGTGCCATGATGTTTTA+TGG + chr8.2:55244779-55244798 None:intergenic 40.0%
! CCATGGATTTGAGGAAGTTT+TGG - chr8.2:55242845-55242864 MS.gene42775:intron 40.0%
! TATGGTGTTGGAACGAATTG+GGG + chr8.2:55243107-55243126 None:intergenic 40.0%
! TATGTACCATTTGGTTTCGC+TGG + chr8.2:55244471-55244490 None:intergenic 40.0%
! TCTATTGTTCTGGTTGGAGT+TGG - chr8.2:55243911-55243930 MS.gene42775:intron 40.0%
!! GATGGAGAATTTTGGAGAGT+AGG - chr8.2:55242007-55242026 MS.gene42775:intron 40.0%
!! GTGTTGGTTATTGTTGCAGA+TGG - chr8.2:55243447-55243466 MS.gene42775:intron 40.0%
!! TCTTTTGGGAACTGACTTCA+TGG - chr8.2:55241918-55241937 MS.gene42775:intron 40.0%
!! TGGAGAATTTTGGAGAGTAG+GGG - chr8.2:55242009-55242028 MS.gene42775:intron 40.0%
!! TGGAGTGCCATGATGTTTTA+TGG + chr8.2:55244848-55244867 None:intergenic 40.0%
!!! AAAAGAAGCTGCTTTTGCTC+TGG - chr8.2:55244143-55244162 MS.gene42775:intron 40.0%
!!! GTATGTTTGGTTTTGGGAAG+TGG + chr8.2:55241884-55241903 None:intergenic 40.0%
AAAGGATCACCAATCGCCTA+AGG - chr8.2:55245550-55245569 MS.gene42775:CDS 45.0%
AAATTGTCGAAATCGCGTGC+AGG + chr8.2:55243980-55243999 None:intergenic 45.0%
AACGGGAAGGGCAAAGAAAA+TGG - chr8.2:55244360-55244379 MS.gene42775:intron 45.0%
AAGGATCACCAATCGCCTAA+GGG - chr8.2:55245551-55245570 MS.gene42775:CDS 45.0%
ACAAGTGCCTTGAGAAGTGA+AGG - chr8.2:55242275-55242294 MS.gene42775:intron 45.0%
ACCCAAGTAATCCAAGCTCA+AGG + chr8.2:55244206-55244225 None:intergenic 45.0%
ATCATCCCGTAAACACCCTT+AGG + chr8.2:55245569-55245588 None:intergenic 45.0%
ATGGACAAAAGTCGTGCAAC+GGG - chr8.2:55244343-55244362 MS.gene42775:intron 45.0%
CACGAACCCATATATGGTGT+TGG + chr8.2:55243119-55243138 None:intergenic 45.0%
CACTGTGATCCTTCACCTAT+TGG - chr8.2:55244792-55244811 MS.gene42775:intron 45.0%
CCAACCAGAACAATAGAGAG+AGG + chr8.2:55243908-55243927 None:intergenic 45.0%
CCCAAGTAATCCAAGCTCAA+GGG + chr8.2:55244205-55244224 None:intergenic 45.0%
CCCTTGAGCTTGGATTACTT+GGG - chr8.2:55244202-55244221 MS.gene42775:intron 45.0%
CCTCTCTCTATTGTTCTGGT+TGG - chr8.2:55243905-55243924 MS.gene42775:intron 45.0%
CTGCTCAGAAAATGTTCTGG+TGG + chr8.2:55244424-55244443 None:intergenic 45.0%
GACCGAATAAGAGTAGCTTG+TGG - chr8.2:55240037-55240056 MS.gene42775:intron 45.0%
GCAGTAAAATGAATCCGCTC+TGG - chr8.2:55243731-55243750 MS.gene42775:intron 45.0%
GCGTATCTCCAATAGAATGC+AGG + chr8.2:55242564-55242583 None:intergenic 45.0%
GCTGATGATTCATCTTGCCA+TGG - chr8.2:55242828-55242847 MS.gene42775:intron 45.0%
GGCATCTAGATTACATGAGC+TGG - chr8.2:55244983-55245002 MS.gene42775:intron 45.0%
GGTGGCATATGTCGAGAATA+AGG + chr8.2:55244406-55244425 None:intergenic 45.0%
GTCGGATAAGGCTCTATTGT+CGG + chr8.2:55244699-55244718 None:intergenic 45.0%
GTGACAATTATTGTGGGACC+AGG + chr8.2:55240091-55240110 None:intergenic 45.0%
TACCATGTGACCACATCCAA+AGG + chr8.2:55245206-55245225 None:intergenic 45.0%
TATAAAGCAGCCCTTGAGCT+TGG - chr8.2:55244192-55244211 MS.gene42775:intron 45.0%
TCATGGCCAATTCCATGTGT+TGG - chr8.2:55243431-55243450 MS.gene42775:intron 45.0%
TCTTGATCCACAATCTCTGC+AGG + chr8.2:55245505-55245524 None:intergenic 45.0%
TTCATATGCACCAGTGATCG+AGG - chr8.2:55243383-55243402 MS.gene42775:intron 45.0%
TTTCGCCATCCAAAATGGTC+TGG - chr8.2:55240680-55240699 MS.gene42775:intron 45.0%
! AAGGATTTGGCCTTTGGATG+TGG - chr8.2:55245193-55245212 MS.gene42775:intron 45.0%
! CTCGGTAGCTTTTCATTAGG+TGG - chr8.2:55244239-55244258 MS.gene42775:intron 45.0%
! GCTCAAGGGCTGCTTTATAT+TGG + chr8.2:55244191-55244210 None:intergenic 45.0%
! TTAGGCGATTGGTGATCCTT+TGG + chr8.2:55245551-55245570 None:intergenic 45.0%
! TTATGGCGGTGGCAGATTTT+CGG + chr8.2:55244831-55244850 None:intergenic 45.0%
! TTTTGCTCTGGCTGCTCTTA+TGG - chr8.2:55244155-55244174 MS.gene42775:intron 45.0%
!! AATCGCCTAAGGGTGTTTAC+GGG - chr8.2:55245561-55245580 MS.gene42775:CDS 45.0%
!! AGAATTTTGGAGAGTAGGGG+AGG - chr8.2:55242012-55242031 MS.gene42775:intron 45.0%
!! CAATCGCCTAAGGGTGTTTA+CGG - chr8.2:55245560-55245579 MS.gene42775:CDS 45.0%
!! TCTTGGCTTTGGTGATGGTA+AGG - chr8.2:55242660-55242679 MS.gene42775:CDS 45.0%
!! TGAATCCGCTCTGGGAAAAA+AGG - chr8.2:55243740-55243759 MS.gene42775:intron 45.0%
ACAAAAGTCGTGCAACGGGA+AGG - chr8.2:55244347-55244366 MS.gene42775:intron 50.0%
ATGCAGACCTGCAGAGATTG+TGG - chr8.2:55245495-55245514 MS.gene42775:CDS 50.0%
ATTGTCCGATATGCCGCCAA+AGG - chr8.2:55245532-55245551 MS.gene42775:CDS 50.0%
CAAAAGTCGTGCAACGGGAA+GGG - chr8.2:55244348-55244367 MS.gene42775:intron 50.0%
CCATCACCAAAGCCAAGACA+AGG + chr8.2:55242658-55242677 None:intergenic 50.0%
CGTAAACACCCTTAGGCGAT+TGG + chr8.2:55245562-55245581 None:intergenic 50.0%
CTAATCCGAGCCAAACCAAG+TGG + chr8.2:55243190-55243209 None:intergenic 50.0%
GCCACCGCCATAAAACATCA+TGG - chr8.2:55244838-55244857 MS.gene42775:intron 50.0%
GCCCTTGAGCTTGGATTACT+TGG - chr8.2:55244201-55244220 MS.gene42775:intron 50.0%
GGATGACCAGCGAAACCAAA+TGG - chr8.2:55244462-55244481 MS.gene42775:intron 50.0%
GGTTATTGTTGCAGATGGCC+AGG - chr8.2:55243452-55243471 MS.gene42775:intron 50.0%
GTGATCCTTTGGCGGCATAT+CGG + chr8.2:55245540-55245559 None:intergenic 50.0%
TCTATTGCAGCCTCGATCAC+TGG + chr8.2:55243396-55243415 None:intergenic 50.0%
TGGTCATCCATGGATGATGC+TGG + chr8.2:55244451-55244470 None:intergenic 50.0%
TGTCGAGAATAAGGAGCTGG+AGG + chr8.2:55244397-55244416 None:intergenic 50.0%
TTGGTTTCGCTGGTCATCCA+TGG + chr8.2:55244461-55244480 None:intergenic 50.0%
! AAGGCTCTATTGTCGGCTGT+TGG + chr8.2:55244692-55244711 None:intergenic 50.0%
! AGATTTTCGGACCACTGCAG+TGG + chr8.2:55244818-55244837 None:intergenic 50.0%
! CTCTATTGTCGGCTGTTGGT+TGG + chr8.2:55244688-55244707 None:intergenic 50.0%
! GCCATGATGTTTTATGGCGG+TGG + chr8.2:55244842-55244861 None:intergenic 50.0%
! TTTGACTTAGCGGTAGCCGT+TGG + chr8.2:55243842-55243861 None:intergenic 50.0%
!! CCTTGTCTTGGCTTTGGTGA+TGG - chr8.2:55242655-55242674 MS.gene42775:CDS 50.0%
!! GTTCTGGTTGGAGTTGGTGA+TGG - chr8.2:55243917-55243936 MS.gene42775:intron 50.0%
!! TGGAGTTGGTGATGGACCTT+GGG - chr8.2:55243925-55243944 MS.gene42775:intron 50.0%
!! TTGGAGTTGGTGATGGACCT+TGG - chr8.2:55243924-55243943 MS.gene42775:intron 50.0%
ACCAAGTGGACGGATACCGA+AGG + chr8.2:55243176-55243195 None:intergenic 55.0%
AGATCGCGGTGAGAGAACTG+TGG + chr8.2:55239777-55239796 None:intergenic 55.0%
CAGCATGCCAGCATCATCCA+TGG - chr8.2:55244441-55244460 MS.gene42775:intron 55.0%
CGAGAATAAGGAGCTGGAGG+AGG + chr8.2:55244394-55244413 None:intergenic 55.0%
CGCCATCCAAAATGGTCTGG+CGG - chr8.2:55240683-55240702 MS.gene42775:intron 55.0%
CGGTATCCGTCCACTTGGTT+TGG - chr8.2:55243177-55243196 MS.gene42775:intron 55.0%
CTGCAGTGGCCAATAGGTGA+AGG + chr8.2:55244804-55244823 None:intergenic 55.0%
GGCCTTTGGATGTGGTCACA+TGG - chr8.2:55245201-55245220 MS.gene42775:intron 55.0%
TAAGGAGCTGGAGGAGGTCT+TGG + chr8.2:55244388-55244407 None:intergenic 55.0%
TCACCTATTGGCCACTGCAG+TGG - chr8.2:55244804-55244823 MS.gene42775:intron 55.0%
TCCGAGCCAAACCAAGTGGA+CGG + chr8.2:55243186-55243205 None:intergenic 55.0%
! GGCGATTGGTGATCCTTTGG+CGG + chr8.2:55245548-55245567 None:intergenic 55.0%
!! TCCGTCCACTTGGTTTGGCT+CGG - chr8.2:55243182-55243201 MS.gene42775:intron 55.0%
GCCTTCGGTATCCGTCCACT+TGG - chr8.2:55243172-55243191 MS.gene42775:intron 60.0%
GGACCACTGCAGTGGCCAAT+AGG + chr8.2:55244810-55244829 None:intergenic 60.0%
! ACTGCGCCGCCAGACCATTT+TGG + chr8.2:55240692-55240711 None:intergenic 60.0%
! CGCCGCCAGACCATTTTGGA+TGG + chr8.2:55240688-55240707 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 55239707 55245598 55239707 ID=MS.gene42775
chr8.2 mRNA 55239707 55245598 55239707 ID=MS.gene42775.t1;Parent=MS.gene42775
chr8.2 exon 55245395 55245598 55245395 ID=MS.gene42775.t1.exon1;Parent=MS.gene42775.t1
chr8.2 CDS 55245395 55245598 55245395 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55242949 55243033 55242949 ID=MS.gene42775.t1.exon2;Parent=MS.gene42775.t1
chr8.2 CDS 55242949 55243033 55242949 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55242629 55242769 55242629 ID=MS.gene42775.t1.exon3;Parent=MS.gene42775.t1
chr8.2 CDS 55242629 55242769 55242629 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55242399 55242512 55242399 ID=MS.gene42775.t1.exon4;Parent=MS.gene42775.t1
chr8.2 CDS 55242399 55242512 55242399 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55241832 55241929 55241832 ID=MS.gene42775.t1.exon5;Parent=MS.gene42775.t1
chr8.2 CDS 55241832 55241929 55241832 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55241631 55241710 55241631 ID=MS.gene42775.t1.exon6;Parent=MS.gene42775.t1
chr8.2 CDS 55241631 55241710 55241631 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55241302 55241407 55241302 ID=MS.gene42775.t1.exon7;Parent=MS.gene42775.t1
chr8.2 CDS 55241302 55241407 55241302 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55241082 55241209 55241082 ID=MS.gene42775.t1.exon8;Parent=MS.gene42775.t1
chr8.2 CDS 55241082 55241209 55241082 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55240822 55240951 55240822 ID=MS.gene42775.t1.exon9;Parent=MS.gene42775.t1
chr8.2 CDS 55240822 55240951 55240822 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55240083 55240139 55240083 ID=MS.gene42775.t1.exon10;Parent=MS.gene42775.t1
chr8.2 CDS 55240083 55240139 55240083 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
chr8.2 exon 55239707 55239796 55239707 ID=MS.gene42775.t1.exon11;Parent=MS.gene42775.t1
chr8.2 CDS 55239707 55239796 55239707 ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1
Gene Sequence

>MS.gene42775

ATGGGAAACTCGCAGGCGAAAAAGCGTGAAGCTGAATATTCGGGAAATGTTGAAGCGAGAAACAAGTCCACAGTTCTCTCACCGCGATCTAAACAACAAGAAGAAGAAGTGTCTTTCAATATTCAACATCATTATGGTAAGAAGAAGCTCTCTACGAAGGAGAAATATGCTTTAATTCCCGATAATTTTACAACTCTTGAACAGGTTAGTATTTCTGCTTTCTTTATTTGTTCTGCAACTTCTTGCTTTGTTTTCTTTGTGGATTTCGTTTACCAATCCATGGATAACTTTTTTTGGTTGTTTAATGGATAATGTTTAAGAGAAGCCGTTGACCGAATAAGAGTAGCTTGTGGAAGACTTGAAGTAGATACTATCTACTCTCCTGGTCCCACAATAATTGTCACTCACTGTTTTGAACAAATTTTTTTTTTATCGGATTTTAAATATAACAAAATTCATTTAATTGAATAATTGGTATTTATATTAAATAATTAATGTATTTAGATAAACAATTATTATTATTATTTTTTTTTATCGGATTTTAAATATAACAAAATTCATTTAATTGAATAATTGGTATTTATATTAAATAATTAATGTATTTAGATAAACAATTATTATTATTATTATTATTTTGAATAATCAATATGTTTGGTTTATAGTACATAATATAGTTTAGATCAGTAATTTATCTATCTAAACTAGCCACATGAGTAAAAATAGTTAATGGAGAAAAAAATTAGCTTGTTTGTGGTACCACTTGCAAATTTATGTGTCTACTTTTATTATGATTTTTCAAAAAAAAAAAAAACAATCTAAGCCTCACAAAAAATGAATGACGTTTTCAAAGTTATATATTTTTCTTTCCAATTGCATCATTTAACTAATATTATATGCATCATTCAAAAGTCATCATTTTCCAATTTGTTTTTCCAAATGATTCCTAGGTCCATGTTGTGTTTACAAGGATTGATTTCGCCATCCAAAATGGTCTGGCGGCGCAGTTTGTTGCCCGCTTGCCTTTTATTAAGTGTTAATAATGATTTATATATATTAAAAAAAAAATTGGAACAAGGATAATTTCCTTCTAAAAGAAATGATAATTTAATAAAAAGACTATTATCTTTCTCTTATTTGTAATCTTTGCTTAATTTGTGTGAAACAATAAAGTGTGATAGTTATTTTGAGACTAGTAAGTTTTTATCTTTTTGACAGAGACTAGTAAGTTTTTTGAGACTAAATAATCACAAGTGTATATTTTGTGTTACTAAATTATCCTGTGCCAAATTATAGTTTTTCATTTCTTAAGTACTTCCTCCAACCTCAAATATAAGTAAAGATTCATTTTTCAAGTTCATTGAATAACTTATGAATTTGGTCTATTTTATAAACAAGATACATCAATTATTCGATACATCAATTATTCGAAGAACTTGAAAAATAAACGTTTCTTAATATTTGAAATGAGAGGGAGTACTCAACCAAAAGACAAAACTACATGCTTTTGTTTAGGTGCTTTTGATGCTATTCTTCTCTTAAAATGTTCATAACTACTCATACTTTCCTCAAATTCATGAATTTTTTCAAAGTTTATTATAGCCACAAAAAGTGATTTTAAGTGAAGATCAACTCCAAAAGTACCTAAAGAAATTCACCTAAGTTTTTTCAAAAAAAAAAAAAAACTAAATGTATCTGATAATTTGAAATAAGTCTTATATTTTAGGATTATTTTTTTCAAAGCAGATTTGAATATAGGGATAAAGTTGTAGTAATTGATTTTGTTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTTTATACTTGTTACAAGGCATTACCTACGAAAGAAGAACCAAACATGAATAGCTAATCACAGAAAGTTGAAAATAAAGATAAGTTAATTAAAATAACACAAGTGGCATTCTTTCATTTCTTCAACTTGAGTATCATAGGCTAAAAGCAGAAAATTGTTTAATGTAGAGCTTGTGTGATAGGTGAAAATTATTGGTCACTCTCAAAACATTATTTAAATGAGAATAAACTATGAAATAATTCACACAAACGACTCAAACAAAAAACAGAAAGCAGAATTTAAGTTGAATGAGCACTAAGATGTCAACATCACAATGTGTGTTTCTTCCAACTAAGTGTATGTTTAGTTCCACTTCCCAAAACCAAACATACACTAAATAAGTTTTTCTTTTGGGAACTGACTTCATGGTTGAATACAAGACTTGATTTTGGATCATTGAGCACATAAACAAGTTAAAACTTAAGGTTACGTTTGGATGGAGAATTTTGGAGAGTAGGGGAGGACTTATTTTGCTTTTCTAAATTAAGGAAGCTATAAAATGTTAATAAAACTGCATTAAGTTTGATTAAAATGTTATATGATCATCGATCATGTTCTTCTTTTATTTCCTTTTTGTAAATATCAAATATATACCAAAATATAAACTAAGCGCTGAAAAGCTCTCCCCTAAAAAACCACATCTAAGCATATCCTAAATAAATTGAGATTAGGTCAAACATGATTTTTTTCCCTTATACAGGTTACAAGTGCCTTGAGAAGTGAAGGTTTAGAATCCTCAAATCTTATCCTTGGAATTGATTTTACGAAAAGCAATGAATGGACTGGTAAGCAGTACATTAACAATGAGTAATTCGTTGATCCATCGCAGTTGATCAATTGGTTATAAATGCAACTGTAATTGAGATCTAAACTGTAAATTTCTGGTTTGACATTAAAATACAGACTTCAATTGGTTATATTTTCCTTTTGAAATGATTGGTTTTAATTCATGTTGTTATTGAAGGCAGAAGCTCGTTTAATAATAAAAGCCTGCATTCTATTGGAGATACGCCTAACCCTTATGAGAAAGCCATTTCGATTATTGGCAAGACTTTGGCTCCTTTTGATGACGACAACTTGATTCCTTGTCTTGGCTTTGGTGATGGTAAGGCATAAGAATCATTAAAGCCTCAACAAATATGAAAGAAACTAACAAAGTTAATATTCTTTTCAGCATTACTATTATTTATTATATTTGTTCGATTTTTTGTTACTATACAGCTACGACTCATGATAGCGAAGTGTTTAGCTTTCATGCTGATGATTCATCTTGCCATGGATTTGAGGAAGTTTTGGCTTGCTATCAAAAAATTGTTCCAAACTTGAGTCTTTCGGGTAACTAAGATCTTAGCTTATAATGTTGTTCTTTTTGCAATCACATTGGTCTTTATGTTGTATTTACTCGTTATAGACTGAATGTATACATTGTTTTAGATCAAATACTCCATGCATTTTGATATCAATAAATTTAAGGACTCAACATAGAAATTCATAGAAGAAAAGTTACTGAGAATGAAAACACTATGAAACTGCCCCAATTCGTTCCAACACCATATATGGGTTCGTGTAAAGTCTTAGGATCGAGTATTGTGAGAGCTTTGCCTTCGGTATCCGTCCACTTGGTTTGGCTCGGATTAGTCACAGTCCAATATGACTTCAATGTTGAGGGTATAGTAAAAAAAAGCACCTATGATTCCTCATTTTGTGGAATAAATCATAGAATGGAATCCCCGTTAATTTGCAGTACCAACATTAGTAAACTTTAAGAGCCATGGCTTAATAAATGTTTGCTTTTTGTTTCTAGGACCAACTTCATATGCACCAGTGATCGAGGCTGCAATAGACATTGTTGAGAAAACTCATGGCCAATTCCATGTGTTGGTTATTGTTGCAGATGGCCAGGTATATACTTTTTGTTTTTTTGTTGTAAGGCCGGGTATATACTGTTAAATTGTGTATTCAAAATTATTTATATTCCAACTTTCCCATAGTTGTATTATTTTATTTGGTTTGAACTACGAAGGTCACAAGATATGGCAACAATGAAGGTGGAAAACTTAGTCCTCAAGAAGAGAAGACAATAAAAGCAATAGTTGATGCCAGGTAAATATGGAAAATTGATAATTATAAGCAACCTTAAATACTCATCAAGATCATTTGCAGTAAAATGAATCCGCTCTGGGAAAAAAGGAATTATCAACAAAAATGGAAGTTAGCATTAGCTATAAATAACGATAACAGAAGAATTGTGAACTATAAAAAACGAACCAACGGCTACCGCTAAGTCAAACATTAATTGTCTGTTTTATACTTATTGTGCTTCCAGTTCATATCCTCTCTCTATTGTTCTGGTTGGAGTTGGTGATGGACCTTGGGAAGATATGAAAAAGTTTGATGACAAGTTACCTGCACGCGATTTCGACAATTTTCAGGTTACAGCAAATCGGCAGTAGTAGTGACATTACTTGGTTACATTGTTTGCAATCACCTAGTTATATTAAAGCATTTTTCTCGTTTTATGCAGTTTGTTAACTTCACTGACATTATGTCTAAGAAAATAAGCCCTTCTGCAAAAGAAGCTGCTTTTGCTCTGGCTGCTCTTATGGAGATACCTTTCCAATATAAAGCAGCCCTTGAGCTTGGATTACTTGGGTGAGTTTTAATACACTCGGTAGCTTTTCATTAGGTGGTTTTCTTTCAGGCAACTATTTGTTAAAATTTGCTGTATGGTGATTAATCATTTGTTTTTTATTTTCTTCCTTCTTTGTTCTATGGACAAAAGTCGTGCAACGGGAAGGGCAAAGAAAATGGTTCCAAGACCTCCTCCAGCTCCTTATTCTCGACATATGCCACCAGAACATTTTCTGAGCAGCATGCCAGCATCATCCATGGATGACCAGCGAAACCAAATGGTACATATGATTGCAAACTAGGGTGCTTCGTTATATTTTCTCCTCTATTTCCTAGAAGTTAATTTGGGTACAAAAAATCAAGTAATGAAGACCGCCATTAAACACAACACTATTGTTGAATTGTTCTGTAGAGGGTCAACACATTTTCTAAAATGCAATCTATATATGAAGGTCAATTGAATTTGTAGAAAATAGACGTATCCAACCAACAGCCGACAATAGAGCCTTATCCGACAACATCATAAATTTTACTATAGATCAATGTTATCGATAGCGGAAAGCCAAAAATCTTCCATAAAACATCATGGCACTGTGATCCTTCACCTATTGGCCACTGCAGTGGTCCGAAAATCTGCCACCGCCATAAAACATCATGGCACTCCAATTCTTCAACTATTTAACGACACTGTTACAGATTATATCTCTAGTAGAAAGCTGGTTTTTACTATGTACAAAGCTGTTACACAAGTGTATGTATACAAAAGAATTTGATGTCGGAGGCATCTAGATTACATGAGCTGGAGCAATAAATTCAAAGATACAAAGTTGAATCATTGTTATGAATGCTGATTTTGTGGGATATCCATGATAATGCCAGCAATAATAACTCTCAACAATTAAGAAACTGACCAGTCTTTGTGATAGATTTATTTTTTGTTTTAATATCTAATAATCTATGCAGGAATGTGCTATATGTCTGACCAATAAAAAGGATTTGGCCTTTGGATGTGGTCACATGGTAAGCTTCATTAAATTATTGACCTCCTGTCTATTCTGTTGTTATACAATCCGTTTCATCATATTTAGATGCATGAAAGAGTTTATTCATAATTTATTTAAACTTATTTTAATGATGCAGTATATGTTTATATTAGTGTTTGGATACATTAATAAATATCATTGATAATATGTTCATAAGATTTTCGATAAATTTCAATAAATTATCAAAAAAGATTATGCATAAGATATAAGCTATTTATTCAAACATACATATACTCATTAAATTTTGGAATGCAGACCTGCAGAGATTGTGGATCAAGATTAAGCGATTGTCCGATATGCCGCCAAAGGATCACCAATCGCCTAAGGGTGTTTACGGGATGATTGCAGCATGA

Protein sequence

>MS.gene42775.t1

MGNSQAKKREAEYSGNVEARNKSTVLSPRSKQQEEEVSFNIQHHYGKKKLSTKEKYALIPDNFTTLEQVTSALRSEGLESSNLILGIDFTKSNEWTGRSSFNNKSLHSIGDTPNPYEKAISIIGKTLAPFDDDNLIPCLGFGDATTHDSEVFSFHADDSSCHGFEEVLACYQKIVPNLSLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTRYGNNEGGKLSPQEEKTIKAIVDASSYPLSIVLVGVGDGPWEDMKKFDDKLPARDFDNFQFVNFTDIMSKKISPSAKEAAFALAALMEIPFQYKAALELGLLGRATGRAKKMVPRPPPAPYSRHMPPEHFLSSMPASSMDDQRNQMECAICLTNKKDLAFGCGHMRLWIKIKRLSDMPPKDHQSPKGVYGMIAA