Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42775.t1 | XP_013445308.1 | 93.9 | 394 | 22 | 2 | 1 | 394 | 1 | 392 | 9.10E-206 | 726.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42775.t1 | Q9SAL0 | 63.4 | 374 | 133 | 2 | 21 | 394 | 18 | 387 | 7.5e-132 | 471.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42775.t1 | A0A072TPA7 | 93.9 | 394 | 22 | 2 | 1 | 394 | 1 | 392 | 6.6e-206 | 726.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049190 | MS.gene42775 | 0.807445 | 5.04E-50 | -1.69E-46 |
MS.gene049254 | MS.gene42775 | 0.808416 | 3.13E-50 | -1.69E-46 |
MS.gene049711 | MS.gene42775 | 0.808914 | 2.45E-50 | -1.69E-46 |
MS.gene049824 | MS.gene42775 | 0.819318 | 1.24E-52 | -1.69E-46 |
MS.gene049825 | MS.gene42775 | 0.807477 | 4.96E-50 | -1.69E-46 |
MS.gene049873 | MS.gene42775 | 0.829556 | 4.82E-55 | -1.69E-46 |
MS.gene050559 | MS.gene42775 | 0.816423 | 5.57E-52 | -1.69E-46 |
MS.gene050561 | MS.gene42775 | 0.808404 | 3.15E-50 | -1.69E-46 |
MS.gene050562 | MS.gene42775 | 0.804681 | 1.92E-49 | -1.69E-46 |
MS.gene051247 | MS.gene42775 | 0.805135 | 1.55E-49 | -1.69E-46 |
MS.gene051279 | MS.gene42775 | 0.819681 | 1.02E-52 | -1.69E-46 |
MS.gene051719 | MS.gene42775 | 0.802174 | 6.36E-49 | -1.69E-46 |
MS.gene051720 | MS.gene42775 | 0.819257 | 1.28E-52 | -1.69E-46 |
MS.gene051744 | MS.gene42775 | 0.858335 | 8.84E-63 | -1.69E-46 |
MS.gene051957 | MS.gene42775 | 0.811052 | 8.49E-51 | -1.69E-46 |
MS.gene052208 | MS.gene42775 | 0.827443 | 1.56E-54 | -1.69E-46 |
MS.gene052584 | MS.gene42775 | 0.807965 | 3.91E-50 | -1.69E-46 |
MS.gene053226 | MS.gene42775 | 0.81089 | 9.20E-51 | -1.69E-46 |
MS.gene053599 | MS.gene42775 | 0.808537 | 2.95E-50 | -1.69E-46 |
MS.gene053883 | MS.gene42775 | 0.819027 | 1.44E-52 | -1.69E-46 |
MS.gene05415 | MS.gene42775 | 0.805377 | 1.37E-49 | -1.69E-46 |
MS.gene054651 | MS.gene42775 | 0.80953 | 1.81E-50 | -1.69E-46 |
MS.gene054967 | MS.gene42775 | 0.808272 | 3.36E-50 | -1.69E-46 |
MS.gene055466 | MS.gene42775 | 0.816047 | 6.76E-52 | -1.69E-46 |
MS.gene055778 | MS.gene42775 | 0.840472 | 8.52E-58 | -1.69E-46 |
MS.gene056366 | MS.gene42775 | 0.813312 | 2.73E-51 | -1.69E-46 |
MS.gene058037 | MS.gene42775 | 0.817971 | 2.50E-52 | -1.69E-46 |
MS.gene058477 | MS.gene42775 | 0.804352 | 2.25E-49 | -1.69E-46 |
MS.gene058625 | MS.gene42775 | 0.810809 | 9.58E-51 | -1.69E-46 |
MS.gene059015 | MS.gene42775 | 0.843699 | 1.19E-58 | -1.69E-46 |
MS.gene059084 | MS.gene42775 | 0.813432 | 2.57E-51 | -1.69E-46 |
MS.gene05954 | MS.gene42775 | 0.804022 | 2.64E-49 | -1.69E-46 |
MS.gene060519 | MS.gene42775 | 0.815149 | 1.07E-51 | -1.69E-46 |
MS.gene060521 | MS.gene42775 | 0.822732 | 2.02E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42775.t1 | MTR_8g447220 | 93.909 | 394 | 22 | 2 | 1 | 394 | 1 | 392 | 0.0 | 735 |
MS.gene42775.t1 | MTR_8g447220 | 95.611 | 319 | 12 | 2 | 1 | 319 | 1 | 317 | 0.0 | 598 |
MS.gene42775.t1 | MTR_2g063857 | 74.294 | 354 | 84 | 2 | 43 | 394 | 54 | 402 | 0.0 | 544 |
MS.gene42775.t1 | MTR_2g063907 | 75.660 | 341 | 69 | 4 | 54 | 391 | 53 | 382 | 0.0 | 528 |
MS.gene42775.t1 | MTR_2g063843 | 73.121 | 346 | 82 | 3 | 54 | 399 | 59 | 393 | 0.0 | 516 |
MS.gene42775.t1 | MTR_6g092020 | 71.875 | 352 | 82 | 4 | 54 | 399 | 46 | 386 | 0.0 | 512 |
MS.gene42775.t1 | MTR_2g063857 | 75.460 | 326 | 73 | 2 | 43 | 366 | 54 | 374 | 2.11e-180 | 507 |
MS.gene42775.t1 | MTR_6g092100 | 77.597 | 308 | 62 | 2 | 55 | 362 | 2 | 302 | 9.08e-177 | 495 |
MS.gene42775.t1 | MTR_6g021730 | 56.701 | 388 | 130 | 6 | 28 | 380 | 75 | 459 | 2.90e-149 | 432 |
MS.gene42775.t1 | MTR_7g033100 | 59.003 | 361 | 123 | 3 | 53 | 394 | 78 | 432 | 8.76e-148 | 427 |
MS.gene42775.t1 | MTR_3g086520 | 60.056 | 358 | 113 | 5 | 47 | 380 | 89 | 440 | 1.38e-146 | 424 |
MS.gene42775.t1 | MTR_3g086520 | 60.056 | 358 | 113 | 5 | 47 | 380 | 92 | 443 | 1.78e-146 | 424 |
MS.gene42775.t1 | MTR_3g086520 | 60.056 | 358 | 113 | 5 | 47 | 380 | 92 | 443 | 1.94e-146 | 424 |
MS.gene42775.t1 | MTR_3g096520 | 56.250 | 384 | 147 | 5 | 3 | 380 | 42 | 410 | 1.44e-145 | 421 |
MS.gene42775.t1 | MTR_3g096520 | 56.250 | 384 | 147 | 5 | 3 | 380 | 59 | 427 | 2.19e-145 | 421 |
MS.gene42775.t1 | MTR_3g096520 | 56.510 | 384 | 145 | 6 | 3 | 380 | 42 | 409 | 4.38e-145 | 420 |
MS.gene42775.t1 | MTR_3g075530 | 59.944 | 357 | 118 | 7 | 44 | 380 | 57 | 408 | 1.11e-143 | 416 |
MS.gene42775.t1 | MTR_8g089670 | 57.103 | 359 | 130 | 3 | 43 | 380 | 93 | 448 | 5.38e-143 | 416 |
MS.gene42775.t1 | MTR_7g033100 | 65.188 | 293 | 100 | 1 | 53 | 345 | 78 | 368 | 9.52e-139 | 402 |
MS.gene42775.t1 | MTR_7g081160 | 57.258 | 248 | 101 | 3 | 78 | 321 | 10 | 256 | 1.04e-88 | 278 |
MS.gene42775.t1 | MTR_7g081170 | 58.721 | 172 | 60 | 3 | 102 | 272 | 81 | 242 | 8.19e-67 | 213 |
MS.gene42775.t1 | MTR_2g063877 | 68.868 | 106 | 23 | 2 | 139 | 244 | 5 | 100 | 1.14e-39 | 139 |
MS.gene42775.t1 | MTR_8g096190 | 30.961 | 281 | 148 | 10 | 55 | 314 | 316 | 571 | 4.97e-23 | 101 |
MS.gene42775.t1 | MTR_8g096190 | 31.225 | 253 | 135 | 9 | 55 | 286 | 316 | 550 | 4.70e-21 | 95.5 |
MS.gene42775.t1 | MTR_8g096190 | 32.273 | 220 | 123 | 7 | 55 | 264 | 316 | 519 | 8.28e-20 | 91.7 |
MS.gene42775.t1 | MTR_1g048160 | 28.720 | 289 | 148 | 11 | 75 | 341 | 328 | 580 | 1.95e-19 | 90.9 |
MS.gene42775.t1 | MTR_7g114100 | 30.469 | 256 | 129 | 10 | 75 | 309 | 166 | 393 | 1.07e-18 | 87.8 |
MS.gene42775.t1 | MTR_7g114130 | 30.350 | 257 | 131 | 10 | 75 | 309 | 332 | 562 | 1.91e-18 | 87.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene42775.t1 | AT1G79380 | 67.733 | 344 | 107 | 1 | 51 | 394 | 48 | 387 | 1.16e-165 | 471 |
MS.gene42775.t1 | AT1G67800 | 60.350 | 343 | 121 | 1 | 53 | 380 | 64 | 406 | 5.18e-151 | 435 |
MS.gene42775.t1 | AT1G67800 | 60.350 | 343 | 121 | 1 | 53 | 380 | 64 | 406 | 5.18e-151 | 435 |
MS.gene42775.t1 | AT1G67800 | 60.350 | 343 | 121 | 1 | 53 | 380 | 64 | 406 | 5.18e-151 | 435 |
MS.gene42775.t1 | AT1G67800 | 60.350 | 343 | 121 | 1 | 53 | 380 | 64 | 406 | 5.18e-151 | 435 |
MS.gene42775.t1 | AT1G67800 | 60.350 | 343 | 121 | 1 | 53 | 380 | 84 | 426 | 1.06e-150 | 434 |
MS.gene42775.t1 | AT5G14420 | 58.659 | 358 | 119 | 5 | 47 | 380 | 89 | 441 | 4.50e-144 | 418 |
MS.gene42775.t1 | AT5G14420 | 58.659 | 358 | 119 | 5 | 47 | 380 | 89 | 441 | 4.50e-144 | 418 |
MS.gene42775.t1 | AT5G14420 | 58.659 | 358 | 119 | 5 | 47 | 380 | 89 | 441 | 4.50e-144 | 418 |
MS.gene42775.t1 | AT5G14420 | 58.659 | 358 | 119 | 5 | 47 | 380 | 89 | 441 | 4.50e-144 | 418 |
MS.gene42775.t1 | AT3G01650 | 60.059 | 338 | 119 | 2 | 55 | 380 | 129 | 462 | 2.50e-142 | 414 |
MS.gene42775.t1 | AT3G01650 | 60.059 | 338 | 119 | 2 | 55 | 380 | 129 | 462 | 2.50e-142 | 414 |
MS.gene42775.t1 | AT1G67800 | 66.436 | 289 | 97 | 0 | 53 | 341 | 84 | 372 | 1.30e-141 | 410 |
MS.gene42775.t1 | AT5G63970 | 60.182 | 329 | 125 | 3 | 57 | 380 | 12 | 339 | 7.51e-136 | 394 |
MS.gene42775.t1 | AT5G63970 | 60.182 | 329 | 125 | 3 | 57 | 380 | 12 | 339 | 7.51e-136 | 394 |
MS.gene42775.t1 | AT5G61910 | 29.900 | 301 | 153 | 12 | 55 | 333 | 1082 | 1346 | 4.59e-22 | 99.4 |
MS.gene42775.t1 | AT1G24545 | 44.037 | 109 | 23 | 1 | 97 | 205 | 46 | 116 | 5.51e-22 | 92.8 |
MS.gene42775.t1 | AT5G61900 | 29.154 | 319 | 165 | 13 | 37 | 333 | 299 | 578 | 8.71e-22 | 97.8 |
MS.gene42775.t1 | AT5G61900 | 29.154 | 319 | 165 | 13 | 37 | 333 | 299 | 578 | 8.71e-22 | 97.8 |
MS.gene42775.t1 | AT5G07300 | 30.935 | 278 | 142 | 13 | 55 | 309 | 317 | 567 | 2.60e-21 | 96.7 |
MS.gene42775.t1 | AT1G08860 | 28.369 | 282 | 145 | 10 | 75 | 335 | 338 | 583 | 9.84e-19 | 88.6 |
Find 95 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGAAAGCCATTTCGATTAT+TGG | 0.160616 | 8.2:-55242688 | MS.gene42775:CDS |
GTTCCAAACTTGAGTCTTTC+GGG | 0.200946 | 8.2:-55242398 | MS.gene42775:intron |
CCATGGATTTGAGGAAGTTT+TGG | 0.222870 | 8.2:-55242438 | MS.gene42775:CDS |
TTCAATATTCAACATCATTA+TGG | 0.232391 | 8.2:-55245462 | MS.gene42775:CDS |
GCTCAAGGGCTGCTTTATAT+TGG | 0.283230 | 8.2:+55241095 | None:intergenic |
TGTTCCAAACTTGAGTCTTT+CGG | 0.287890 | 8.2:-55242399 | MS.gene42775:CDS |
GCCCTTGAGCTTGGATTACT+TGG | 0.292933 | 8.2:-55241082 | MS.gene42775:CDS |
CAATCGCCTAAGGGTGTTTA+CGG | 0.320619 | 8.2:-55239723 | MS.gene42775:CDS |
TTCAAGAGTTGTAAAATTAT+CGG | 0.322301 | 8.2:+55245398 | None:intergenic |
ATCGAAATGGCTTTCTCATA+AGG | 0.335804 | 8.2:+55242694 | None:intergenic |
TTGATTCCTTGTCTTGGCTT+TGG | 0.337268 | 8.2:-55242634 | MS.gene42775:CDS |
ATATCCTCTCTCTATTGTTC+TGG | 0.338322 | 8.2:-55241382 | MS.gene42775:CDS |
TATATGTCTGACCAATAAAA+AGG | 0.346239 | 8.2:-55240109 | MS.gene42775:CDS |
AATAAAAGCCTGCATTCTAT+TGG | 0.346666 | 8.2:-55242730 | MS.gene42775:CDS |
AAAGCGTGAAGCTGAATATT+CGG | 0.355029 | 8.2:-55245556 | MS.gene42775:CDS |
GGTGGCATATGTCGAGAATA+AGG | 0.376167 | 8.2:+55240880 | None:intergenic |
TAAGGAGCTGGAGGAGGTCT+TGG | 0.379892 | 8.2:+55240898 | None:intergenic |
GAATCCTCAAATCTTATCCT+TGG | 0.383285 | 8.2:-55242981 | MS.gene42775:CDS |
TCGAAATGGCTTTCTCATAA+GGG | 0.384038 | 8.2:+55242695 | None:intergenic |
TTACCCGAAAGACTCAAGTT+TGG | 0.391155 | 8.2:+55242395 | None:intergenic |
TTAGGCGATTGGTGATCCTT+TGG | 0.406759 | 8.2:+55239735 | None:intergenic |
TGGAGTTGGTGATGGACCTT+GGG | 0.408112 | 8.2:-55241358 | MS.gene42775:CDS |
ACTACGAAGGTCACAAGATA+TGG | 0.410884 | 8.2:-55241697 | MS.gene42775:intron |
CCTTGTCTTGGCTTTGGTGA+TGG | 0.416101 | 8.2:-55242628 | MS.gene42775:intron |
GTGATCCTTTGGCGGCATAT+CGG | 0.424418 | 8.2:+55239746 | None:intergenic |
TATGTACCATTTGGTTTCGC+TGG | 0.430085 | 8.2:+55240815 | None:intergenic |
TTCGATTATTGGCAAGACTT+TGG | 0.431397 | 8.2:-55242677 | MS.gene42775:CDS |
TTGGAGTTGGTGATGGACCT+TGG | 0.437479 | 8.2:-55241359 | MS.gene42775:CDS |
CAATAACCAACACATGGAAT+TGG | 0.438745 | 8.2:+55241846 | None:intergenic |
TCAAGAGTTGTAAAATTATC+GGG | 0.441302 | 8.2:+55245399 | None:intergenic |
AATCGCCTAAGGGTGTTTAC+GGG | 0.446498 | 8.2:-55239722 | MS.gene42775:CDS |
TTTATTGTCTTCTCTTCTTG+AGG | 0.447554 | 8.2:+55241649 | None:intergenic |
AAGCGTGAAGCTGAATATTC+GGG | 0.448185 | 8.2:-55245555 | MS.gene42775:CDS |
AACGGGAAGGGCAAAGAAAA+TGG | 0.450053 | 8.2:-55240923 | MS.gene42775:CDS |
GGCGATTGGTGATCCTTTGG+CGG | 0.450853 | 8.2:+55239738 | None:intergenic |
TCTATTGTTCTGGTTGGAGT+TGG | 0.451422 | 8.2:-55241372 | MS.gene42775:CDS |
AATTCCAAGGATAAGATTTG+AGG | 0.462510 | 8.2:+55242977 | None:intergenic |
ATGGACAAAAGTCGTGCAAC+GGG | 0.462578 | 8.2:-55240940 | MS.gene42775:intron |
ATGGCTTTCTCATAAGGGTT+AGG | 0.466114 | 8.2:+55242700 | None:intergenic |
CCCTTGAGCTTGGATTACTT+GGG | 0.466955 | 8.2:-55241081 | MS.gene42775:intron |
TTGGTTTCGCTGGTCATCCA+TGG | 0.468207 | 8.2:+55240825 | None:intergenic |
TATAAAGCAGCCCTTGAGCT+TGG | 0.469009 | 8.2:-55241091 | MS.gene42775:CDS |
CCTCTCTCTATTGTTCTGGT+TGG | 0.471140 | 8.2:-55241378 | MS.gene42775:CDS |
AGTCTTGCCAATAATCGAAA+TGG | 0.471552 | 8.2:+55242681 | None:intergenic |
GACAACTTGATTCCTTGTCT+TGG | 0.477064 | 8.2:-55242640 | MS.gene42775:CDS |
TTCATCTTGCCATGGATTTG+AGG | 0.481878 | 8.2:-55242447 | MS.gene42775:CDS |
AAGGATTTGGCCTTTGGATG+TGG | 0.483554 | 8.2:-55240090 | MS.gene42775:CDS |
GTTCTGGTTGGAGTTGGTGA+TGG | 0.484054 | 8.2:-55241366 | MS.gene42775:CDS |
ATCAAGTTGTCGTCATCAAA+AGG | 0.490399 | 8.2:+55242652 | None:intergenic |
TCTATTGCAGCCTCGATCAC+TGG | 0.498733 | 8.2:+55241890 | None:intergenic |
ATGCTGCTCAGAAAATGTTC+TGG | 0.510850 | 8.2:+55240859 | None:intergenic |
AAAGGATCACCAATCGCCTA+AGG | 0.513958 | 8.2:-55239733 | MS.gene42775:CDS |
GGTTATTGTTGCAGATGGCC+AGG | 0.517879 | 8.2:-55241831 | MS.gene42775:intron |
CGTAAACACCCTTAGGCGAT+TGG | 0.519030 | 8.2:+55239724 | None:intergenic |
TTCTAAACCTTCACTTCTCA+AGG | 0.519105 | 8.2:+55243001 | None:intergenic |
GTGTTGGTTATTGTTGCAGA+TGG | 0.521064 | 8.2:-55241836 | MS.gene42775:CDS |
GGATGACCAGCGAAACCAAA+TGG | 0.534645 | 8.2:-55240821 | MS.gene42775:intron |
ATCACTGGTGCATATGAAGT+TGG | 0.534886 | 8.2:+55241905 | None:intergenic |
ACAAGATATGGCAACAATGA+AGG | 0.539840 | 8.2:-55241685 | MS.gene42775:CDS |
TCATGGCCAATTCCATGTGT+TGG | 0.540158 | 8.2:-55241852 | MS.gene42775:CDS |
ACCCAAGTAATCCAAGCTCA+AGG | 0.545582 | 8.2:+55241080 | None:intergenic |
ACGAAAAGCAATGAATGGAC+TGG | 0.546910 | 8.2:-55242948 | MS.gene42775:intron |
CAGCATGCCAGCATCATCCA+TGG | 0.547144 | 8.2:-55240842 | MS.gene42775:CDS |
GACATTGTTGAGAAAACTCA+TGG | 0.547591 | 8.2:-55241869 | MS.gene42775:CDS |
AAATTGTCGAAATCGCGTGC+AGG | 0.550617 | 8.2:+55241306 | None:intergenic |
AGATTTGATGGGAAACTCGC+AGG | 0.552660 | 8.2:-55245583 | None:intergenic |
ACAAGTGCCTTGAGAAGTGA+AGG | 0.554585 | 8.2:-55243008 | MS.gene42775:CDS |
TAAAAGCAATAGTTGATGCC+AGG | 0.555213 | 8.2:-55241630 | MS.gene42775:intron |
CAAAAGTCGTGCAACGGGAA+GGG | 0.559376 | 8.2:-55240935 | MS.gene42775:intron |
ATGCAGACCTGCAGAGATTG+TGG | 0.559696 | 8.2:-55239788 | MS.gene42775:intron |
CCAAAACTTCCTCAAATCCA+TGG | 0.560420 | 8.2:+55242438 | None:intergenic |
CGAGAATAAGGAGCTGGAGG+AGG | 0.567814 | 8.2:+55240892 | None:intergenic |
AGGGCTGCTTTATATTGGAA+AGG | 0.572206 | 8.2:+55241100 | None:intergenic |
CTGCAACAATAACCAACACA+TGG | 0.572509 | 8.2:+55241840 | None:intergenic |
ACAAAAGTCGTGCAACGGGA+AGG | 0.575594 | 8.2:-55240936 | MS.gene42775:intron |
GCGTATCTCCAATAGAATGC+AGG | 0.576191 | 8.2:+55242722 | None:intergenic |
GGCCTTTGGATGTGGTCACA+TGG | 0.577351 | 8.2:-55240082 | MS.gene42775:intron |
TGGTCATCCATGGATGATGC+TGG | 0.585112 | 8.2:+55240835 | None:intergenic |
TACCATGTGACCACATCCAA+AGG | 0.592224 | 8.2:+55240080 | None:intergenic |
TATGGACAAAAGTCGTGCAA+CGG | 0.594214 | 8.2:-55240941 | MS.gene42775:intron |
GCTGATGATTCATCTTGCCA+TGG | 0.599690 | 8.2:-55242455 | MS.gene42775:CDS |
CCCAAGTAATCCAAGCTCAA+GGG | 0.605458 | 8.2:+55241081 | None:intergenic |
TTCATATGCACCAGTGATCG+AGG | 0.608412 | 8.2:-55241900 | MS.gene42775:CDS |
AGATATGGCAACAATGAAGG+TGG | 0.609743 | 8.2:-55241682 | MS.gene42775:CDS |
ATTGTCCGATATGCCGCCAA+AGG | 0.612193 | 8.2:-55239751 | MS.gene42775:CDS |
TCTTCTTGTTGTTTAGATCG+CGG | 0.619537 | 8.2:+55245495 | None:intergenic |
ATATGTCGAGAATAAGGAGC+TGG | 0.623729 | 8.2:+55240886 | None:intergenic |
AAGGATCACCAATCGCCTAA+GGG | 0.625121 | 8.2:-55239732 | MS.gene42775:CDS |
CTGCTCAGAAAATGTTCTGG+TGG | 0.629525 | 8.2:+55240862 | None:intergenic |
CCATCACCAAAGCCAAGACA+AGG | 0.630215 | 8.2:+55242628 | None:intergenic |
ATCATCCCGTAAACACCCTT+AGG | 0.633326 | 8.2:+55239717 | None:intergenic |
TGTCGAGAATAAGGAGCTGG+AGG | 0.660177 | 8.2:+55240889 | None:intergenic |
TAAGAAGAAGCTCTCTACGA+AGG | 0.666216 | 8.2:-55245439 | MS.gene42775:CDS |
CCAACCAGAACAATAGAGAG+AGG | 0.672546 | 8.2:+55241378 | None:intergenic |
AGATCGCGGTGAGAGAACTG+TGG | 0.732596 | 8.2:+55245509 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATTAAAAAAAAAAT+TGG | - | chr8.2:55240753-55240772 | MS.gene42775:intron | 0.0% |
!!! | TTATTATTATTTTTTTTTAT+CGG | - | chr8.2:55240222-55240241 | MS.gene42775:intron | 0.0% |
!! | AAATAAAATAATACAACTAT+GGG | + | chr8.2:55243559-55243578 | None:intergenic | 10.0% |
!! | AATTCATTTAATTGAATAAT+TGG | - | chr8.2:55240159-55240178 | MS.gene42775:intron | 10.0% |
!! | TATATTTGATATTTACAAAA+AGG | + | chr8.2:55242143-55242162 | None:intergenic | 10.0% |
!!! | TGAACAAATTTTTTTTTTAT+CGG | - | chr8.2:55240120-55240139 | MS.gene42775:CDS | 10.0% |
!!! | TTTTGATATCAATAAATTTA+AGG | - | chr8.2:55243023-55243042 | MS.gene42775:intron | 10.0% |
!!! | TTTTTTTTTTGAAAAAACTT+AGG | + | chr8.2:55241364-55241383 | None:intergenic | 10.0% |
!! | AAAAATGCTTTAATATAACT+AGG | + | chr8.2:55244062-55244081 | None:intergenic | 15.0% |
!! | AGAAATGAAAAACTATAATT+TGG | + | chr8.2:55240992-55241011 | None:intergenic | 15.0% |
!! | CAAATAAAATAATACAACTA+TGG | + | chr8.2:55243560-55243579 | None:intergenic | 15.0% |
!! | CATTATTAACACTTAATAAA+AGG | + | chr8.2:55240729-55240748 | None:intergenic | 15.0% |
!! | TATATGTTTATATTAGTGTT+TGG | - | chr8.2:55245343-55245362 | MS.gene42775:intron | 15.0% |
!! | TTAAAAAAAAAATTGGAACA+AGG | - | chr8.2:55240760-55240779 | MS.gene42775:intron | 15.0% |
!!! | AAATTATCATTTCTTTTAGA+AGG | + | chr8.2:55240793-55240812 | None:intergenic | 15.0% |
!!! | ACTAAATAAGTTTTTCTTTT+GGG | - | chr8.2:55241904-55241923 | MS.gene42775:CDS | 15.0% |
!!! | CATAGTTGTATTATTTTATT+TGG | - | chr8.2:55243558-55243577 | MS.gene42775:intron | 15.0% |
!!! | TACATATACTCATTAAATTT+TGG | - | chr8.2:55245471-55245490 | MS.gene42775:CDS | 15.0% |
!!! | TATTTTGCTTTTCTAAATTA+AGG | - | chr8.2:55242038-55242057 | MS.gene42775:intron | 15.0% |
!!! | TGAAATAAGTCTTATATTTT+AGG | - | chr8.2:55241408-55241427 | MS.gene42775:intron | 15.0% |
!!! | TTTTGAATAATCAATATGTT+TGG | - | chr8.2:55240339-55240358 | MS.gene42775:intron | 15.0% |
!! | AAAATGCAATCTATATATGA+AGG | - | chr8.2:55244633-55244652 | MS.gene42775:intron | 20.0% |
!! | AAACTTATTTAGTGTATGTT+TGG | + | chr8.2:55241897-55241916 | None:intergenic | 20.0% |
!! | AAAGGAATTATCAACAAAAA+TGG | - | chr8.2:55243758-55243777 | MS.gene42775:intron | 20.0% |
!! | AATCATTTGGAAAAACAAAT+TGG | + | chr8.2:55240629-55240648 | None:intergenic | 20.0% |
!! | ACATGAGTAAAAATAGTTAA+TGG | - | chr8.2:55240414-55240433 | MS.gene42775:intron | 20.0% |
!! | AGTAAAATTTATGATGTTGT+CGG | + | chr8.2:55244717-55244736 | None:intergenic | 20.0% |
!! | ATCCTAAATAAATTGAGATT+AGG | - | chr8.2:55242221-55242240 | MS.gene42775:intron | 20.0% |
!! | ATTAAAATACAGACTTCAAT+TGG | - | chr8.2:55242463-55242482 | MS.gene42775:CDS | 20.0% |
!! | CATAAACAAGTTAAAACTTA+AGG | - | chr8.2:55241975-55241994 | MS.gene42775:intron | 20.0% |
!! | CATTGAATAACTTATGAATT+TGG | - | chr8.2:55241062-55241081 | MS.gene42775:intron | 20.0% |
!! | GTTAATTAAAATAACACAAG+TGG | - | chr8.2:55241616-55241635 | MS.gene42775:intron | 20.0% |
!! | TAATATCTAATAATCTATGC+AGG | - | chr8.2:55245144-55245163 | MS.gene42775:intron | 20.0% |
!! | TATACAAAAGAATTTGATGT+CGG | - | chr8.2:55244959-55244978 | MS.gene42775:intron | 20.0% |
!! | TATTAGTTAAATGATGCAAT+TGG | + | chr8.2:55240576-55240595 | None:intergenic | 20.0% |
!! | TATTTCCTAGAAGTTAATTT+GGG | - | chr8.2:55244529-55244548 | MS.gene42775:intron | 20.0% |
!! | TGAAAAAATTCATGAATTTG+AGG | + | chr8.2:55241273-55241292 | None:intergenic | 20.0% |
!! | TGAATCTTTACTTATATTTG+AGG | + | chr8.2:55241031-55241050 | None:intergenic | 20.0% |
!! | TTAAAACCAATCATTTCAAA+AGG | + | chr8.2:55242498-55242517 | None:intergenic | 20.0% |
!! | TTCAAGAGTTGTAAAATTAT+CGG | + | chr8.2:55239888-55239907 | None:intergenic | 20.0% |
!! | TTCAATATTCAACATCATTA+TGG | - | chr8.2:55239821-55239840 | MS.gene42775:intron | 20.0% |
!! | TTTATTGATATCAAAATGCA+TGG | + | chr8.2:55243019-55243038 | None:intergenic | 20.0% |
!!! | AAAAACAAAAAGTATATACC+TGG | + | chr8.2:55243473-55243492 | None:intergenic | 20.0% |
!!! | AACTTTTTTTGGTTGTTTAA+TGG | - | chr8.2:55239992-55240011 | MS.gene42775:intron | 20.0% |
!!! | ATTAACTATTTTTACTCATG+TGG | + | chr8.2:55240415-55240434 | None:intergenic | 20.0% |
!!! | ATTTGTTAAAATTTGCTGTA+TGG | - | chr8.2:55244279-55244298 | MS.gene42775:intron | 20.0% |
!!! | CACTAAATAAGTTTTTCTTT+TGG | - | chr8.2:55241903-55241922 | MS.gene42775:CDS | 20.0% |
!!! | CTTTTTGTTTTTTTGTTGTA+AGG | - | chr8.2:55243481-55243500 | MS.gene42775:intron | 20.0% |
!!! | TATTTTCCTTTTGAAATGAT+TGG | - | chr8.2:55242489-55242508 | MS.gene42775:CDS | 20.0% |
!!! | TCTTAATATTTGAAATGAGA+GGG | - | chr8.2:55241156-55241175 | MS.gene42775:CDS | 20.0% |
!!! | TTAATTCATGTTGTTATTGA+AGG | - | chr8.2:55242514-55242533 | MS.gene42775:intron | 20.0% |
!!! | TTCTTAATATTTGAAATGAG+AGG | - | chr8.2:55241155-55241174 | MS.gene42775:CDS | 20.0% |
!!! | TTTGTTTTATACTTGTTACA+AGG | - | chr8.2:55241529-55241548 | MS.gene42775:intron | 20.0% |
! | AAAAAAAGTTATCCATGGAT+TGG | + | chr8.2:55239982-55240001 | None:intergenic | 25.0% |
! | AAACTTAGGTGAATTTCTTT+AGG | + | chr8.2:55241350-55241369 | None:intergenic | 25.0% |
! | AAATCTTCCATAAAACATCA+TGG | - | chr8.2:55244769-55244788 | MS.gene42775:intron | 25.0% |
! | AACAATAGTGTTGTGTTTAA+TGG | + | chr8.2:55244581-55244600 | None:intergenic | 25.0% |
! | AACTATAAAAAACGAACCAA+CGG | - | chr8.2:55243823-55243842 | MS.gene42775:intron | 25.0% |
! | AATAAATCTATCACAAAGAC+TGG | + | chr8.2:55245116-55245135 | None:intergenic | 25.0% |
! | ACAATTTAACAGTATATACC+CGG | + | chr8.2:55243507-55243526 | None:intergenic | 25.0% |
! | AGATCTAAACTGTAAATTTC+TGG | - | chr8.2:55242434-55242453 | MS.gene42775:CDS | 25.0% |
! | ATGATCTTGATGAGTATTTA+AGG | + | chr8.2:55243709-55243728 | None:intergenic | 25.0% |
! | ATGATTTATTCCACAAAATG+AGG | + | chr8.2:55243270-55243289 | None:intergenic | 25.0% |
! | CTATTTCCTAGAAGTTAATT+TGG | - | chr8.2:55244528-55244547 | MS.gene42775:intron | 25.0% |
! | CTCTTAAAGTTTACTAATGT+TGG | + | chr8.2:55243321-55243340 | None:intergenic | 25.0% |
! | GACCTAATCTCAATTTATTT+AGG | + | chr8.2:55242226-55242245 | None:intergenic | 25.0% |
! | TATATGTCTGACCAATAAAA+AGG | - | chr8.2:55245174-55245193 | MS.gene42775:intron | 25.0% |
! | TCAAAGCAGATTTGAATATA+GGG | - | chr8.2:55241441-55241460 | MS.gene42775:intron | 25.0% |
! | TCAAGAGTTGTAAAATTATC+GGG | + | chr8.2:55239887-55239906 | None:intergenic | 25.0% |
! | TCGTTAAATAGTTGAAGAAT+TGG | + | chr8.2:55244868-55244887 | None:intergenic | 25.0% |
! | TGCATCTAAATATGATGAAA+CGG | + | chr8.2:55245276-55245295 | None:intergenic | 25.0% |
! | TTAAAACTTAAGGTTACGTT+TGG | - | chr8.2:55241985-55242004 | MS.gene42775:intron | 25.0% |
! | TTCAAAGCAGATTTGAATAT+AGG | - | chr8.2:55241440-55241459 | MS.gene42775:intron | 25.0% |
! | TTGTGGAATAAATCATAGAA+TGG | - | chr8.2:55243274-55243293 | MS.gene42775:intron | 25.0% |
!! | AATTAACTTCTAGGAAATAG+AGG | + | chr8.2:55244528-55244547 | None:intergenic | 25.0% |
!! | ACAATTAATGTTTGACTTAG+CGG | + | chr8.2:55243852-55243871 | None:intergenic | 25.0% |
!! | AGTTTCTTTCATATTTGTTG+AGG | + | chr8.2:55242703-55242722 | None:intergenic | 25.0% |
!! | ATCAATTTTCCATATTTACC+TGG | + | chr8.2:55243674-55243693 | None:intergenic | 25.0% |
!! | ATTTTACGAAAAGCAATGAA+TGG | - | chr8.2:55242330-55242349 | MS.gene42775:intron | 25.0% |
!! | GATGTTTTATGGAAGATTTT+TGG | + | chr8.2:55244768-55244787 | None:intergenic | 25.0% |
!! | TAATTTTACAACTCTTGAAC+AGG | - | chr8.2:55239889-55239908 | MS.gene42775:intron | 25.0% |
!! | TCTTTACTTATATTTGAGGT+TGG | + | chr8.2:55241027-55241046 | None:intergenic | 25.0% |
!! | TGAATTTCTTTAGGTACTTT+TGG | + | chr8.2:55241341-55241360 | None:intergenic | 25.0% |
!! | TTGAATACAAGACTTGATTT+TGG | - | chr8.2:55241941-55241960 | MS.gene42775:intron | 25.0% |
!! | TTTTCGTAAAATCAATTCCA+AGG | + | chr8.2:55242322-55242341 | None:intergenic | 25.0% |
!!! | AAAACTACATGCTTTTGTTT+AGG | - | chr8.2:55241197-55241216 | MS.gene42775:intron | 25.0% |
!!! | AATCCATGGATAACTTTTTT+TGG | - | chr8.2:55239981-55240000 | MS.gene42775:intron | 25.0% |
!!! | AATGTTTGCTTTTTGTTTCT+AGG | - | chr8.2:55243354-55243373 | MS.gene42775:intron | 25.0% |
!!! | ATGATTTTTTTCCCTTATAC+AGG | - | chr8.2:55242250-55242269 | MS.gene42775:intron | 25.0% |
!!! | ATTTAGTGTATGTTTGGTTT+TGG | + | chr8.2:55241891-55241910 | None:intergenic | 25.0% |
!!! | GAAAAAAATTAGCTTGTTTG+TGG | - | chr8.2:55240438-55240457 | MS.gene42775:intron | 25.0% |
!!! | TCACTTAAAATCACTTTTTG+TGG | + | chr8.2:55241309-55241328 | None:intergenic | 25.0% |
!!! | TTTAGTGTATGTTTGGTTTT+GGG | + | chr8.2:55241890-55241909 | None:intergenic | 25.0% |
AACACTTAATAAAAGGCAAG+CGG | + | chr8.2:55240722-55240741 | None:intergenic | 30.0% | |
AATAAAAGCCTGCATTCTAT+TGG | - | chr8.2:55242553-55242572 | MS.gene42775:intron | 30.0% | |
AATAGTGTTGTGTTTAATGG+CGG | + | chr8.2:55244578-55244597 | None:intergenic | 30.0% | |
AATTCCAAGGATAAGATTTG+AGG | + | chr8.2:55242309-55242328 | None:intergenic | 30.0% | |
AGCAAACATTTATTAAGCCA+TGG | + | chr8.2:55243344-55243363 | None:intergenic | 30.0% | |
ATGTTGGTACTGCAAATTAA+CGG | + | chr8.2:55243305-55243324 | None:intergenic | 30.0% | |
ATTGTTGAATTGTTCTGTAG+AGG | - | chr8.2:55244595-55244614 | MS.gene42775:intron | 30.0% | |
ATTTATGATGTTGTCGGATA+AGG | + | chr8.2:55244711-55244730 | None:intergenic | 30.0% | |
CAACCAAAAAAAGTTATCCA+TGG | + | chr8.2:55239987-55240006 | None:intergenic | 30.0% | |
CAATATGACTTCAATGTTGA+GGG | - | chr8.2:55243218-55243237 | MS.gene42775:intron | 30.0% | |
GAAAAACTATAATTTGGCAC+AGG | + | chr8.2:55240986-55241005 | None:intergenic | 30.0% | |
GAACTAAACATACACTTAGT+TGG | + | chr8.2:55241862-55241881 | None:intergenic | 30.0% | |
GTACATATGATTGCAAACTA+GGG | - | chr8.2:55244484-55244503 | MS.gene42775:intron | 30.0% | |
GTGTGATAGGTGAAAATTAT+TGG | - | chr8.2:55241705-55241724 | MS.gene42775:intron | 30.0% | |
TAATACAACTATGGGAAAGT+TGG | + | chr8.2:55243551-55243570 | None:intergenic | 30.0% | |
TAGACACATAAATTTGCAAG+TGG | + | chr8.2:55240466-55240485 | None:intergenic | 30.0% | |
TAGATCAATGTTATCGATAG+CGG | - | chr8.2:55244738-55244757 | MS.gene42775:intron | 30.0% | |
TATTATTGCTGGCATTATCA+TGG | + | chr8.2:55245070-55245089 | None:intergenic | 30.0% | |
TCTGACCAATAAAAAGGATT+TGG | - | chr8.2:55245180-55245199 | MS.gene42775:intron | 30.0% | |
TGTATAACAACAGAATAGAC+AGG | + | chr8.2:55245251-55245270 | None:intergenic | 30.0% | |
TTATATCTCTAGTAGAAAGC+TGG | - | chr8.2:55244900-55244919 | MS.gene42775:intron | 30.0% | |
TTCTTCAACTTGAGTATCAT+AGG | - | chr8.2:55241650-55241669 | MS.gene42775:CDS | 30.0% | |
TTGCAATCATATGTACCATT+TGG | + | chr8.2:55244480-55244499 | None:intergenic | 30.0% | |
TTGTACCCAAATTAACTTCT+AGG | + | chr8.2:55244537-55244556 | None:intergenic | 30.0% | |
TTGTTGAATTGTTCTGTAGA+GGG | - | chr8.2:55244596-55244615 | MS.gene42775:intron | 30.0% | |
TTGTTGAGAGTTATTATTGC+TGG | + | chr8.2:55245081-55245100 | None:intergenic | 30.0% | |
TTTATTGTCTTCTCTTCTTG+AGG | + | chr8.2:55243637-55243656 | None:intergenic | 30.0% | |
TTTCTTCCTTCTTTGTTCTA+TGG | - | chr8.2:55244324-55244343 | MS.gene42775:intron | 30.0% | |
! | AAAGGCCAAATCCTTTTTAT+TGG | + | chr8.2:55245188-55245207 | None:intergenic | 30.0% |
! | AATAAAAAGGATTTGGCCTT+TGG | - | chr8.2:55245187-55245206 | MS.gene42775:intron | 30.0% |
! | ATTTAGGATATGCTTAGATG+TGG | + | chr8.2:55242210-55242229 | None:intergenic | 30.0% |
! | TCAGCGCTTAGTTTATATTT+TGG | + | chr8.2:55242168-55242187 | None:intergenic | 30.0% |
! | TGTGATTAGCTATTCATGTT+TGG | + | chr8.2:55241575-55241594 | None:intergenic | 30.0% |
! | TGTTCTTTTTGCAATCACAT+TGG | - | chr8.2:55242933-55242952 | MS.gene42775:intron | 30.0% |
! | TGTTTTTCCAAATGATTCCT+AGG | - | chr8.2:55240632-55240651 | MS.gene42775:intron | 30.0% |
! | TTACTTATATTTGAGGTTGG+AGG | + | chr8.2:55241024-55241043 | None:intergenic | 30.0% |
! | TTAGTAAACTTTAAGAGCCA+TGG | - | chr8.2:55243324-55243343 | MS.gene42775:intron | 30.0% |
! | TTTTGTCCATAGAACAAAGA+AGG | + | chr8.2:55244333-55244352 | None:intergenic | 30.0% |
!! | TTATTTGGTTTGAACTACGA+AGG | - | chr8.2:55243573-55243592 | MS.gene42775:intron | 30.0% |
!!! | AACGTCATTCATTTTTTGTG+AGG | + | chr8.2:55240530-55240549 | None:intergenic | 30.0% |
!!! | AACTTTTTCATATCTTCCCA+AGG | + | chr8.2:55243944-55243963 | None:intergenic | 30.0% |
!!! | AAGCATGTAGTTTTGTCTTT+TGG | + | chr8.2:55241191-55241210 | None:intergenic | 30.0% |
!!! | ATGCTTAGATGTGGTTTTTT+AGG | + | chr8.2:55242201-55242220 | None:intergenic | 30.0% |
!!! | GTTATGAATGCTGATTTTGT+GGG | - | chr8.2:55245040-55245059 | MS.gene42775:intron | 30.0% |
!!! | TGCTTAGATGTGGTTTTTTA+GGG | + | chr8.2:55242200-55242219 | None:intergenic | 30.0% |
!!! | TGTTATGAATGCTGATTTTG+TGG | - | chr8.2:55245039-55245058 | MS.gene42775:intron | 30.0% |
!!! | TTCTTGCTTTGTTTTCTTTG+TGG | - | chr8.2:55239946-55239965 | MS.gene42775:intron | 30.0% |
!!! | TTGTTTTTTTGTTGTAAGGC+CGG | - | chr8.2:55243485-55243504 | MS.gene42775:intron | 30.0% |
AAAGCGTGAAGCTGAATATT+CGG | - | chr8.2:55239727-55239746 | MS.gene42775:CDS | 35.0% | |
AACTTAAGGTTACGTTTGGA+TGG | - | chr8.2:55241989-55242008 | MS.gene42775:intron | 35.0% | |
AATAGAGAGAGGATATGAAC+TGG | + | chr8.2:55243897-55243916 | None:intergenic | 35.0% | |
ACAAAAGAATTTGATGTCGG+AGG | - | chr8.2:55244962-55244981 | MS.gene42775:intron | 35.0% | |
ACAAGATATGGCAACAATGA+AGG | - | chr8.2:55243598-55243617 | MS.gene42775:intron | 35.0% | |
ACACTTAATAAAAGGCAAGC+GGG | + | chr8.2:55240721-55240740 | None:intergenic | 35.0% | |
ACAGTGAGTGACAATTATTG+TGG | + | chr8.2:55240098-55240117 | None:intergenic | 35.0% | |
ACTTTACACGAACCCATATA+TGG | + | chr8.2:55243125-55243144 | None:intergenic | 35.0% | |
AGTCTTGCCAATAATCGAAA+TGG | + | chr8.2:55242605-55242624 | None:intergenic | 35.0% | |
ATAACAACAGAATAGACAGG+AGG | + | chr8.2:55245248-55245267 | None:intergenic | 35.0% | |
ATATCCTCTCTCTATTGTTC+TGG | - | chr8.2:55243901-55243920 | MS.gene42775:intron | 35.0% | |
ATCGAAATGGCTTTCTCATA+AGG | + | chr8.2:55242592-55242611 | None:intergenic | 35.0% | |
ATTCGTTCCAACACCATATA+TGG | - | chr8.2:55243109-55243128 | MS.gene42775:intron | 35.0% | |
CAATAACCAACACATGGAAT+TGG | + | chr8.2:55243440-55243459 | None:intergenic | 35.0% | |
CAATCCTTGTAAACACAACA+TGG | + | chr8.2:55240659-55240678 | None:intergenic | 35.0% | |
CAGTGAGTGACAATTATTGT+GGG | + | chr8.2:55240097-55240116 | None:intergenic | 35.0% | |
CCAATATGACTTCAATGTTG+AGG | - | chr8.2:55243217-55243236 | MS.gene42775:intron | 35.0% | |
CCTCAACATTGAAGTCATAT+TGG | + | chr8.2:55243220-55243239 | None:intergenic | 35.0% | |
GAATCCTCAAATCTTATCCT+TGG | - | chr8.2:55242302-55242321 | MS.gene42775:intron | 35.0% | |
GACATTGTTGAGAAAACTCA+TGG | - | chr8.2:55243414-55243433 | MS.gene42775:intron | 35.0% | |
GAGAAAGCCATTTCGATTAT+TGG | - | chr8.2:55242595-55242614 | MS.gene42775:intron | 35.0% | |
GGTACATATGATTGCAAACT+AGG | - | chr8.2:55244483-55244502 | MS.gene42775:intron | 35.0% | |
TAATGTAGAGCTTGTGTGAT+AGG | - | chr8.2:55241692-55241711 | MS.gene42775:intron | 35.0% | |
TCCACAAAATGAGGAATCAT+AGG | + | chr8.2:55243261-55243280 | None:intergenic | 35.0% | |
TCGAAATGGCTTTCTCATAA+GGG | + | chr8.2:55242591-55242610 | None:intergenic | 35.0% | |
TGTTCCAAACTTGAGTCTTT+CGG | - | chr8.2:55242884-55242903 | MS.gene42775:intron | 35.0% | |
TGTTGGTACTGCAAATTAAC+GGG | + | chr8.2:55243304-55243323 | None:intergenic | 35.0% | |
TTCCACAAGCTACTCTTATT+CGG | + | chr8.2:55240042-55240061 | None:intergenic | 35.0% | |
TTCGATTATTGGCAAGACTT+TGG | - | chr8.2:55242606-55242625 | MS.gene42775:intron | 35.0% | |
TTCGTTCCAACACCATATAT+GGG | - | chr8.2:55243110-55243129 | MS.gene42775:intron | 35.0% | |
TTCTAAACCTTCACTTCTCA+AGG | + | chr8.2:55242285-55242304 | None:intergenic | 35.0% | |
! | ACCTATGATTCCTCATTTTG+TGG | - | chr8.2:55243257-55243276 | MS.gene42775:intron | 35.0% |
! | ATATGGTGTTGGAACGAATT+GGG | + | chr8.2:55243108-55243127 | None:intergenic | 35.0% |
! | ATCAAGTTGTCGTCATCAAA+AGG | + | chr8.2:55242634-55242653 | None:intergenic | 35.0% |
! | ATTGATTTCGCCATCCAAAA+TGG | - | chr8.2:55240675-55240694 | MS.gene42775:intron | 35.0% |
! | TAAAAGCAATAGTTGATGCC+AGG | - | chr8.2:55243653-55243672 | MS.gene42775:intron | 35.0% |
! | TACGTTTGGATGGAGAATTT+TGG | - | chr8.2:55241999-55242018 | MS.gene42775:intron | 35.0% |
! | TAGTTGATGCCAGGTAAATA+TGG | - | chr8.2:55243662-55243681 | MS.gene42775:intron | 35.0% |
! | TATATGGTGTTGGAACGAAT+TGG | + | chr8.2:55243109-55243128 | None:intergenic | 35.0% |
! | TCATTAGGTGGTTTTCTTTC+AGG | - | chr8.2:55244251-55244270 | MS.gene42775:intron | 35.0% |
!! | ATGGAGAATTTTGGAGAGTA+GGG | - | chr8.2:55242008-55242027 | MS.gene42775:intron | 35.0% |
!! | ATGTTTGGTTCTTCTTTCGT+AGG | + | chr8.2:55241560-55241579 | None:intergenic | 35.0% |
!! | TCTTCTTGTTGTTTAGATCG+CGG | + | chr8.2:55239791-55239810 | None:intergenic | 35.0% |
!! | TGGGTGAGTTTTAATACACT+CGG | - | chr8.2:55244221-55244240 | MS.gene42775:intron | 35.0% |
!!! | GCTTAGATGTGGTTTTTTAG+GGG | + | chr8.2:55242199-55242218 | None:intergenic | 35.0% |
!!! | TAATTCCTTTTTTCCCAGAG+CGG | + | chr8.2:55243748-55243767 | None:intergenic | 35.0% |
!!! | TGTTTTTTTGTTGTAAGGCC+GGG | - | chr8.2:55243486-55243505 | MS.gene42775:intron | 35.0% |
AACCAATTGATCAACTGCGA+TGG | + | chr8.2:55242395-55242414 | None:intergenic | 40.0% | |
AAGCGTGAAGCTGAATATTC+GGG | - | chr8.2:55239728-55239747 | MS.gene42775:CDS | 40.0% | |
ACATGGACCTAGGAATCATT+TGG | + | chr8.2:55240642-55240661 | None:intergenic | 40.0% | |
ACGAAAAGCAATGAATGGAC+TGG | - | chr8.2:55242335-55242354 | MS.gene42775:intron | 40.0% | |
ACTACGAAGGTCACAAGATA+TGG | - | chr8.2:55243586-55243605 | MS.gene42775:intron | 40.0% | |
AGATATGGCAACAATGAAGG+TGG | - | chr8.2:55243601-55243620 | MS.gene42775:intron | 40.0% | |
AGCTACTCTTATTCGGTCAA+CGG | + | chr8.2:55240035-55240054 | None:intergenic | 40.0% | |
AGGCACTTGTAACCTGTATA+AGG | + | chr8.2:55242265-55242284 | None:intergenic | 40.0% | |
AGGTCCATGTTGTGTTTACA+AGG | - | chr8.2:55240652-55240671 | MS.gene42775:intron | 40.0% | |
ATATGTCGAGAATAAGGAGC+TGG | + | chr8.2:55244400-55244419 | None:intergenic | 40.0% | |
ATCACTGGTGCATATGAAGT+TGG | + | chr8.2:55243381-55243400 | None:intergenic | 40.0% | |
ATCCATCGCAGTTGATCAAT+TGG | - | chr8.2:55242390-55242409 | MS.gene42775:intron | 40.0% | |
ATGCTGCTCAGAAAATGTTC+TGG | + | chr8.2:55244427-55244446 | None:intergenic | 40.0% | |
ATGGCTTTCTCATAAGGGTT+AGG | + | chr8.2:55242586-55242605 | None:intergenic | 40.0% | |
ATGGGTTCGTGTAAAGTCTT+AGG | - | chr8.2:55243128-55243147 | MS.gene42775:intron | 40.0% | |
CAGTAAAATGAATCCGCTCT+GGG | - | chr8.2:55243732-55243751 | MS.gene42775:intron | 40.0% | |
CCAAAACTTCCTCAAATCCA+TGG | + | chr8.2:55242848-55242867 | None:intergenic | 40.0% | |
CTGCAACAATAACCAACACA+TGG | + | chr8.2:55243446-55243465 | None:intergenic | 40.0% | |
GACAACTTGATTCCTTGTCT+TGG | - | chr8.2:55242643-55242662 | MS.gene42775:CDS | 40.0% | |
GCAGTAGTAGTGACATTACT+TGG | - | chr8.2:55244018-55244037 | MS.gene42775:intron | 40.0% | |
GGATTTCGTTTACCAATCCA+TGG | - | chr8.2:55239967-55239986 | MS.gene42775:intron | 40.0% | |
GGCACTTGTAACCTGTATAA+GGG | + | chr8.2:55242264-55242283 | None:intergenic | 40.0% | |
GTAGATACTATCTACTCTCC+TGG | - | chr8.2:55240070-55240089 | MS.gene42775:intron | 40.0% | |
GTTCCAAACTTGAGTCTTTC+GGG | - | chr8.2:55242885-55242904 | MS.gene42775:intron | 40.0% | |
GTTGGTACTGCAAATTAACG+GGG | + | chr8.2:55243303-55243322 | None:intergenic | 40.0% | |
TAAGAAGAAGCTCTCTACGA+AGG | - | chr8.2:55239844-55239863 | MS.gene42775:intron | 40.0% | |
TATGGACAAAAGTCGTGCAA+CGG | - | chr8.2:55244342-55244361 | MS.gene42775:intron | 40.0% | |
TATTGTGAGAGCTTTGCCTT+CGG | - | chr8.2:55243157-55243176 | MS.gene42775:intron | 40.0% | |
TGTAAACACAACATGGACCT+AGG | + | chr8.2:55240652-55240671 | None:intergenic | 40.0% | |
TTACCCGAAAGACTCAAGTT+TGG | + | chr8.2:55242891-55242910 | None:intergenic | 40.0% | |
TTCATCTTGCCATGGATTTG+AGG | - | chr8.2:55242836-55242855 | MS.gene42775:intron | 40.0% | |
TTGATTCCTTGTCTTGGCTT+TGG | - | chr8.2:55242649-55242668 | MS.gene42775:CDS | 40.0% | |
! | AAAGCAGCTTCTTTTGCAGA+AGG | + | chr8.2:55244138-55244157 | None:intergenic | 40.0% |
! | AAGCAGCTTCTTTTGCAGAA+GGG | + | chr8.2:55244137-55244156 | None:intergenic | 40.0% |
! | ACACTCGGTAGCTTTTCATT+AGG | - | chr8.2:55244236-55244255 | MS.gene42775:intron | 40.0% |
! | ACGCGATTTCGACAATTTTC+AGG | - | chr8.2:55243982-55244001 | MS.gene42775:intron | 40.0% |
! | AGGGCTGCTTTATATTGGAA+AGG | + | chr8.2:55244186-55244205 | None:intergenic | 40.0% |
! | AGTGCCATGATGTTTTATGG+CGG | + | chr8.2:55244776-55244795 | None:intergenic | 40.0% |
! | CACAGTGCCATGATGTTTTA+TGG | + | chr8.2:55244779-55244798 | None:intergenic | 40.0% |
! | CCATGGATTTGAGGAAGTTT+TGG | - | chr8.2:55242845-55242864 | MS.gene42775:intron | 40.0% |
! | TATGGTGTTGGAACGAATTG+GGG | + | chr8.2:55243107-55243126 | None:intergenic | 40.0% |
! | TATGTACCATTTGGTTTCGC+TGG | + | chr8.2:55244471-55244490 | None:intergenic | 40.0% |
! | TCTATTGTTCTGGTTGGAGT+TGG | - | chr8.2:55243911-55243930 | MS.gene42775:intron | 40.0% |
!! | GATGGAGAATTTTGGAGAGT+AGG | - | chr8.2:55242007-55242026 | MS.gene42775:intron | 40.0% |
!! | GTGTTGGTTATTGTTGCAGA+TGG | - | chr8.2:55243447-55243466 | MS.gene42775:intron | 40.0% |
!! | TCTTTTGGGAACTGACTTCA+TGG | - | chr8.2:55241918-55241937 | MS.gene42775:intron | 40.0% |
!! | TGGAGAATTTTGGAGAGTAG+GGG | - | chr8.2:55242009-55242028 | MS.gene42775:intron | 40.0% |
!! | TGGAGTGCCATGATGTTTTA+TGG | + | chr8.2:55244848-55244867 | None:intergenic | 40.0% |
!!! | AAAAGAAGCTGCTTTTGCTC+TGG | - | chr8.2:55244143-55244162 | MS.gene42775:intron | 40.0% |
!!! | GTATGTTTGGTTTTGGGAAG+TGG | + | chr8.2:55241884-55241903 | None:intergenic | 40.0% |
AAAGGATCACCAATCGCCTA+AGG | - | chr8.2:55245550-55245569 | MS.gene42775:CDS | 45.0% | |
AAATTGTCGAAATCGCGTGC+AGG | + | chr8.2:55243980-55243999 | None:intergenic | 45.0% | |
AACGGGAAGGGCAAAGAAAA+TGG | - | chr8.2:55244360-55244379 | MS.gene42775:intron | 45.0% | |
AAGGATCACCAATCGCCTAA+GGG | - | chr8.2:55245551-55245570 | MS.gene42775:CDS | 45.0% | |
ACAAGTGCCTTGAGAAGTGA+AGG | - | chr8.2:55242275-55242294 | MS.gene42775:intron | 45.0% | |
ACCCAAGTAATCCAAGCTCA+AGG | + | chr8.2:55244206-55244225 | None:intergenic | 45.0% | |
ATCATCCCGTAAACACCCTT+AGG | + | chr8.2:55245569-55245588 | None:intergenic | 45.0% | |
ATGGACAAAAGTCGTGCAAC+GGG | - | chr8.2:55244343-55244362 | MS.gene42775:intron | 45.0% | |
CACGAACCCATATATGGTGT+TGG | + | chr8.2:55243119-55243138 | None:intergenic | 45.0% | |
CACTGTGATCCTTCACCTAT+TGG | - | chr8.2:55244792-55244811 | MS.gene42775:intron | 45.0% | |
CCAACCAGAACAATAGAGAG+AGG | + | chr8.2:55243908-55243927 | None:intergenic | 45.0% | |
CCCAAGTAATCCAAGCTCAA+GGG | + | chr8.2:55244205-55244224 | None:intergenic | 45.0% | |
CCCTTGAGCTTGGATTACTT+GGG | - | chr8.2:55244202-55244221 | MS.gene42775:intron | 45.0% | |
CCTCTCTCTATTGTTCTGGT+TGG | - | chr8.2:55243905-55243924 | MS.gene42775:intron | 45.0% | |
CTGCTCAGAAAATGTTCTGG+TGG | + | chr8.2:55244424-55244443 | None:intergenic | 45.0% | |
GACCGAATAAGAGTAGCTTG+TGG | - | chr8.2:55240037-55240056 | MS.gene42775:intron | 45.0% | |
GCAGTAAAATGAATCCGCTC+TGG | - | chr8.2:55243731-55243750 | MS.gene42775:intron | 45.0% | |
GCGTATCTCCAATAGAATGC+AGG | + | chr8.2:55242564-55242583 | None:intergenic | 45.0% | |
GCTGATGATTCATCTTGCCA+TGG | - | chr8.2:55242828-55242847 | MS.gene42775:intron | 45.0% | |
GGCATCTAGATTACATGAGC+TGG | - | chr8.2:55244983-55245002 | MS.gene42775:intron | 45.0% | |
GGTGGCATATGTCGAGAATA+AGG | + | chr8.2:55244406-55244425 | None:intergenic | 45.0% | |
GTCGGATAAGGCTCTATTGT+CGG | + | chr8.2:55244699-55244718 | None:intergenic | 45.0% | |
GTGACAATTATTGTGGGACC+AGG | + | chr8.2:55240091-55240110 | None:intergenic | 45.0% | |
TACCATGTGACCACATCCAA+AGG | + | chr8.2:55245206-55245225 | None:intergenic | 45.0% | |
TATAAAGCAGCCCTTGAGCT+TGG | - | chr8.2:55244192-55244211 | MS.gene42775:intron | 45.0% | |
TCATGGCCAATTCCATGTGT+TGG | - | chr8.2:55243431-55243450 | MS.gene42775:intron | 45.0% | |
TCTTGATCCACAATCTCTGC+AGG | + | chr8.2:55245505-55245524 | None:intergenic | 45.0% | |
TTCATATGCACCAGTGATCG+AGG | - | chr8.2:55243383-55243402 | MS.gene42775:intron | 45.0% | |
TTTCGCCATCCAAAATGGTC+TGG | - | chr8.2:55240680-55240699 | MS.gene42775:intron | 45.0% | |
! | AAGGATTTGGCCTTTGGATG+TGG | - | chr8.2:55245193-55245212 | MS.gene42775:intron | 45.0% |
! | CTCGGTAGCTTTTCATTAGG+TGG | - | chr8.2:55244239-55244258 | MS.gene42775:intron | 45.0% |
! | GCTCAAGGGCTGCTTTATAT+TGG | + | chr8.2:55244191-55244210 | None:intergenic | 45.0% |
! | TTAGGCGATTGGTGATCCTT+TGG | + | chr8.2:55245551-55245570 | None:intergenic | 45.0% |
! | TTATGGCGGTGGCAGATTTT+CGG | + | chr8.2:55244831-55244850 | None:intergenic | 45.0% |
! | TTTTGCTCTGGCTGCTCTTA+TGG | - | chr8.2:55244155-55244174 | MS.gene42775:intron | 45.0% |
!! | AATCGCCTAAGGGTGTTTAC+GGG | - | chr8.2:55245561-55245580 | MS.gene42775:CDS | 45.0% |
!! | AGAATTTTGGAGAGTAGGGG+AGG | - | chr8.2:55242012-55242031 | MS.gene42775:intron | 45.0% |
!! | CAATCGCCTAAGGGTGTTTA+CGG | - | chr8.2:55245560-55245579 | MS.gene42775:CDS | 45.0% |
!! | TCTTGGCTTTGGTGATGGTA+AGG | - | chr8.2:55242660-55242679 | MS.gene42775:CDS | 45.0% |
!! | TGAATCCGCTCTGGGAAAAA+AGG | - | chr8.2:55243740-55243759 | MS.gene42775:intron | 45.0% |
ACAAAAGTCGTGCAACGGGA+AGG | - | chr8.2:55244347-55244366 | MS.gene42775:intron | 50.0% | |
ATGCAGACCTGCAGAGATTG+TGG | - | chr8.2:55245495-55245514 | MS.gene42775:CDS | 50.0% | |
ATTGTCCGATATGCCGCCAA+AGG | - | chr8.2:55245532-55245551 | MS.gene42775:CDS | 50.0% | |
CAAAAGTCGTGCAACGGGAA+GGG | - | chr8.2:55244348-55244367 | MS.gene42775:intron | 50.0% | |
CCATCACCAAAGCCAAGACA+AGG | + | chr8.2:55242658-55242677 | None:intergenic | 50.0% | |
CGTAAACACCCTTAGGCGAT+TGG | + | chr8.2:55245562-55245581 | None:intergenic | 50.0% | |
CTAATCCGAGCCAAACCAAG+TGG | + | chr8.2:55243190-55243209 | None:intergenic | 50.0% | |
GCCACCGCCATAAAACATCA+TGG | - | chr8.2:55244838-55244857 | MS.gene42775:intron | 50.0% | |
GCCCTTGAGCTTGGATTACT+TGG | - | chr8.2:55244201-55244220 | MS.gene42775:intron | 50.0% | |
GGATGACCAGCGAAACCAAA+TGG | - | chr8.2:55244462-55244481 | MS.gene42775:intron | 50.0% | |
GGTTATTGTTGCAGATGGCC+AGG | - | chr8.2:55243452-55243471 | MS.gene42775:intron | 50.0% | |
GTGATCCTTTGGCGGCATAT+CGG | + | chr8.2:55245540-55245559 | None:intergenic | 50.0% | |
TCTATTGCAGCCTCGATCAC+TGG | + | chr8.2:55243396-55243415 | None:intergenic | 50.0% | |
TGGTCATCCATGGATGATGC+TGG | + | chr8.2:55244451-55244470 | None:intergenic | 50.0% | |
TGTCGAGAATAAGGAGCTGG+AGG | + | chr8.2:55244397-55244416 | None:intergenic | 50.0% | |
TTGGTTTCGCTGGTCATCCA+TGG | + | chr8.2:55244461-55244480 | None:intergenic | 50.0% | |
! | AAGGCTCTATTGTCGGCTGT+TGG | + | chr8.2:55244692-55244711 | None:intergenic | 50.0% |
! | AGATTTTCGGACCACTGCAG+TGG | + | chr8.2:55244818-55244837 | None:intergenic | 50.0% |
! | CTCTATTGTCGGCTGTTGGT+TGG | + | chr8.2:55244688-55244707 | None:intergenic | 50.0% |
! | GCCATGATGTTTTATGGCGG+TGG | + | chr8.2:55244842-55244861 | None:intergenic | 50.0% |
! | TTTGACTTAGCGGTAGCCGT+TGG | + | chr8.2:55243842-55243861 | None:intergenic | 50.0% |
!! | CCTTGTCTTGGCTTTGGTGA+TGG | - | chr8.2:55242655-55242674 | MS.gene42775:CDS | 50.0% |
!! | GTTCTGGTTGGAGTTGGTGA+TGG | - | chr8.2:55243917-55243936 | MS.gene42775:intron | 50.0% |
!! | TGGAGTTGGTGATGGACCTT+GGG | - | chr8.2:55243925-55243944 | MS.gene42775:intron | 50.0% |
!! | TTGGAGTTGGTGATGGACCT+TGG | - | chr8.2:55243924-55243943 | MS.gene42775:intron | 50.0% |
ACCAAGTGGACGGATACCGA+AGG | + | chr8.2:55243176-55243195 | None:intergenic | 55.0% | |
AGATCGCGGTGAGAGAACTG+TGG | + | chr8.2:55239777-55239796 | None:intergenic | 55.0% | |
CAGCATGCCAGCATCATCCA+TGG | - | chr8.2:55244441-55244460 | MS.gene42775:intron | 55.0% | |
CGAGAATAAGGAGCTGGAGG+AGG | + | chr8.2:55244394-55244413 | None:intergenic | 55.0% | |
CGCCATCCAAAATGGTCTGG+CGG | - | chr8.2:55240683-55240702 | MS.gene42775:intron | 55.0% | |
CGGTATCCGTCCACTTGGTT+TGG | - | chr8.2:55243177-55243196 | MS.gene42775:intron | 55.0% | |
CTGCAGTGGCCAATAGGTGA+AGG | + | chr8.2:55244804-55244823 | None:intergenic | 55.0% | |
GGCCTTTGGATGTGGTCACA+TGG | - | chr8.2:55245201-55245220 | MS.gene42775:intron | 55.0% | |
TAAGGAGCTGGAGGAGGTCT+TGG | + | chr8.2:55244388-55244407 | None:intergenic | 55.0% | |
TCACCTATTGGCCACTGCAG+TGG | - | chr8.2:55244804-55244823 | MS.gene42775:intron | 55.0% | |
TCCGAGCCAAACCAAGTGGA+CGG | + | chr8.2:55243186-55243205 | None:intergenic | 55.0% | |
! | GGCGATTGGTGATCCTTTGG+CGG | + | chr8.2:55245548-55245567 | None:intergenic | 55.0% |
!! | TCCGTCCACTTGGTTTGGCT+CGG | - | chr8.2:55243182-55243201 | MS.gene42775:intron | 55.0% |
GCCTTCGGTATCCGTCCACT+TGG | - | chr8.2:55243172-55243191 | MS.gene42775:intron | 60.0% | |
GGACCACTGCAGTGGCCAAT+AGG | + | chr8.2:55244810-55244829 | None:intergenic | 60.0% | |
! | ACTGCGCCGCCAGACCATTT+TGG | + | chr8.2:55240692-55240711 | None:intergenic | 60.0% |
! | CGCCGCCAGACCATTTTGGA+TGG | + | chr8.2:55240688-55240707 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 55239707 | 55245598 | 55239707 | ID=MS.gene42775 |
chr8.2 | mRNA | 55239707 | 55245598 | 55239707 | ID=MS.gene42775.t1;Parent=MS.gene42775 |
chr8.2 | exon | 55245395 | 55245598 | 55245395 | ID=MS.gene42775.t1.exon1;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55245395 | 55245598 | 55245395 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55242949 | 55243033 | 55242949 | ID=MS.gene42775.t1.exon2;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55242949 | 55243033 | 55242949 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55242629 | 55242769 | 55242629 | ID=MS.gene42775.t1.exon3;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55242629 | 55242769 | 55242629 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55242399 | 55242512 | 55242399 | ID=MS.gene42775.t1.exon4;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55242399 | 55242512 | 55242399 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55241832 | 55241929 | 55241832 | ID=MS.gene42775.t1.exon5;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55241832 | 55241929 | 55241832 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55241631 | 55241710 | 55241631 | ID=MS.gene42775.t1.exon6;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55241631 | 55241710 | 55241631 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55241302 | 55241407 | 55241302 | ID=MS.gene42775.t1.exon7;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55241302 | 55241407 | 55241302 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55241082 | 55241209 | 55241082 | ID=MS.gene42775.t1.exon8;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55241082 | 55241209 | 55241082 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55240822 | 55240951 | 55240822 | ID=MS.gene42775.t1.exon9;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55240822 | 55240951 | 55240822 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55240083 | 55240139 | 55240083 | ID=MS.gene42775.t1.exon10;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55240083 | 55240139 | 55240083 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
chr8.2 | exon | 55239707 | 55239796 | 55239707 | ID=MS.gene42775.t1.exon11;Parent=MS.gene42775.t1 |
chr8.2 | CDS | 55239707 | 55239796 | 55239707 | ID=cds.MS.gene42775.t1;Parent=MS.gene42775.t1 |
Gene Sequence |
Protein sequence |