Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059084.t1 | PNY08352.1 | 68.1 | 656 | 164 | 7 | 1 | 627 | 1 | 640 | 1.70E-243 | 852 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059084.t1 | Q6AVI0 | 29.5 | 559 | 349 | 13 | 59 | 591 | 163 | 702 | 1.6e-64 | 248.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059084.t1 | A0A2K3NZ93 | 68.1 | 656 | 164 | 7 | 1 | 627 | 1 | 640 | 1.2e-243 | 852.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049271 | MS.gene059084 | 0.81 | 1.43E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene059084 | 0.804089 | 2.55E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene059084 | 0.82091 | 5.34E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene059084 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene059084 | 0.82519 | 5.37E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene059084 | 0.827002 | 1.99E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene059084 | 0.817247 | 3.64E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene059084 | 0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene059084 | 0.824162 | 9.37E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene059084 | 0.801085 | 1.06E-48 | -1.69E-46 |
| MS.gene054775 | MS.gene059084 | 0.826073 | 3.31E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene059084 | 0.814809 | 1.27E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene059084 | 0.819779 | 9.71E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene059084 | 0.811067 | 8.43E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene059084 | 0.827324 | 1.67E-54 | -1.69E-46 |
| MS.gene056215 | MS.gene059084 | 0.804533 | 2.06E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene059625 | 0.842893 | 1.96E-58 | -1.69E-46 |
| MS.gene059084 | MS.gene060429 | 0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene060587 | 0.801351 | 9.38E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene061872 | 0.804746 | 1.86E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene062043 | 0.806303 | 8.78E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene062743 | 0.829311 | 5.53E-55 | -1.69E-46 |
| MS.gene059084 | MS.gene062821 | 0.82304 | 1.72E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene063417 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene064321 | 0.837331 | 5.54E-57 | -1.69E-46 |
| MS.gene059084 | MS.gene064852 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene064944 | 0.805199 | 1.50E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene065039 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene065667 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene066105 | 0.802316 | 5.94E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene066335 | 0.81673 | 4.76E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene066782 | 0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene066784 | 0.811962 | 5.38E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene067208 | 0.848748 | 5.03E-60 | -1.69E-46 |
| MS.gene059084 | MS.gene067932 | 0.83707 | 6.45E-57 | -1.69E-46 |
| MS.gene059084 | MS.gene068010 | 0.804636 | 1.96E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene068012 | 0.809286 | 2.04E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene068116 | 0.817147 | 3.84E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene068456 | 0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene068924 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene069956 | 0.812214 | 4.75E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene069966 | 0.805357 | 1.39E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene070474 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene070818 | 0.805638 | 1.21E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene071442 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene07203 | 0.800614 | 1.33E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene07374 | 0.805389 | 1.37E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene07394 | 0.815756 | 7.85E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene074206 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene074356 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene074519 | 0.819944 | 8.90E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene07733 | 0.801878 | 7.31E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene08365 | 0.822287 | 2.57E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene08586 | 0.802461 | 5.55E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene08618 | 0.806797 | 6.91E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene20253 | 0.808656 | 2.78E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene20920 | 0.802098 | 6.59E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene21127 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene22255 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene22918 | 0.809784 | 1.59E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene22964 | 0.809148 | 2.18E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene23528 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene23571 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene23697 | 0.848708 | 5.16E-60 | -1.69E-46 |
| MS.gene059084 | MS.gene24736 | 0.821829 | 3.28E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene25038 | 0.802418 | 5.66E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene26380 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene26659 | 0.819751 | 9.85E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene27059 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene27342 | 0.811866 | 5.65E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene28387 | 0.819293 | 1.25E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene28606 | 0.800982 | 1.12E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene29022 | 0.814855 | 1.25E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene29807 | 0.822823 | 1.93E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene30198 | 0.825136 | 5.53E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene30739 | 0.807645 | 4.57E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene30882 | 0.832119 | 1.13E-55 | -1.69E-46 |
| MS.gene059084 | MS.gene30920 | 0.8086 | 2.86E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene30946 | 0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene31283 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene31347 | 0.834163 | 3.51E-56 | -1.69E-46 |
| MS.gene059084 | MS.gene31433 | 0.829751 | 4.32E-55 | -1.69E-46 |
| MS.gene059084 | MS.gene32555 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene33853 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene34979 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene35575 | 0.824254 | 8.92E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene35631 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene36899 | 0.820934 | 5.28E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene37944 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene39554 | 0.826964 | 2.03E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene40160 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene42775 | 0.813432 | 2.57E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene43886 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene43970 | 0.821004 | 5.08E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene44795 | 0.814279 | 1.67E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene45425 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene47661 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene48346 | 0.81837 | 2.03E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene48814 | 0.814424 | 1.55E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene49876 | 0.808248 | 3.40E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene50163 | 0.805156 | 1.53E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene50564 | 0.8047 | 1.91E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene51511 | 0.804247 | 2.37E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene52525 | 0.800905 | 1.16E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene53064 | 0.818331 | 2.07E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene53586 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene54288 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene54544 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene56547 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene57178 | 0.807474 | 4.97E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene57486 | 0.811802 | 5.83E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene58468 | 0.801633 | 8.21E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene58547 | 0.80089 | 1.17E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene58802 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene60141 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene61226 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene61283 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene61720 | 0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene64249 | 0.828707 | 7.74E-55 | -1.69E-46 |
| MS.gene059084 | MS.gene64671 | 0.803137 | 4.02E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene65172 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene65271 | 0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene67738 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene68999 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene69459 | 0.819554 | 1.09E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene69510 | 0.802201 | 6.28E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene70852 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene71440 | 0.816552 | 5.21E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene71704 | 0.822388 | 2.43E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene72008 | 0.816618 | 5.04E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene72268 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene73016 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene74869 | 0.824774 | 6.73E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene75963 | 0.826349 | 2.85E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene76158 | 0.80823 | 3.43E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene78641 | 0.823226 | 1.55E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene79195 | 0.814037 | 1.89E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene79960 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene059084 | MS.gene80853 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene059084 | MS.gene84426 | 0.812119 | 4.98E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene84454 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene84705 | 0.801163 | 1.03E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene84803 | 0.808963 | 2.39E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene86086 | 0.837141 | 6.19E-57 | -1.69E-46 |
| MS.gene059084 | MS.gene88304 | 0.812024 | 5.22E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene89419 | 0.804968 | 1.67E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene89726 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene90022 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene90605 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene90906 | 0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene91310 | 0.822495 | 2.30E-53 | -1.69E-46 |
| MS.gene059084 | MS.gene93716 | 0.804811 | 1.81E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene94447 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene059084 | MS.gene95236 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene98848 | 0.803668 | 3.12E-49 | -1.69E-46 |
| MS.gene059084 | MS.gene98963 | 0.81621 | 6.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059084.t1 | AT3G42170 | 26.866 | 536 | 368 | 9 | 59 | 591 | 138 | 652 | 8.69e-67 | 231 |
| MS.gene059084.t1 | AT3G42170 | 26.866 | 536 | 368 | 9 | 59 | 591 | 160 | 674 | 1.05e-66 | 231 |
| MS.gene059084.t1 | AT1G18560 | 20.696 | 546 | 374 | 14 | 68 | 591 | 141 | 649 | 1.13e-21 | 100 |
Find 117 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATCAGCATTGGGAAAA+TGG | 0.209507 | 1.2:+10708427 | MS.gene059084:CDS |
| CATCATTATATTCCTCAAAA+AGG | 0.217920 | 1.2:-10708603 | None:intergenic |
| ATATATATGTTAGAGGTATT+TGG | 0.219690 | 1.2:+10708325 | MS.gene059084:CDS |
| CCCACTTTATTGATAATAAC+TGG | 0.245886 | 1.2:+10707672 | MS.gene059084:CDS |
| TCATTCTCTACAAATGAAAT+AGG | 0.255352 | 1.2:-10707443 | None:intergenic |
| ATCTGAGCTAAATAAGTATT+TGG | 0.262489 | 1.2:+10708735 | MS.gene059084:CDS |
| ACAAAGTTGGATATATAAAT+TGG | 0.273647 | 1.2:+10708509 | MS.gene059084:CDS |
| TACAGAGACCTCTGAGGATT+TGG | 0.278990 | 1.2:+10708765 | MS.gene059084:CDS |
| AGGATTTGGATATCTTAAAT+TGG | 0.281436 | 1.2:+10708779 | MS.gene059084:CDS |
| TGCACACATGATTGGCTATA+TGG | 0.290733 | 1.2:+10708967 | MS.gene059084:CDS |
| GTTGCGTTCAAACAAGGATT+TGG | 0.301184 | 1.2:+10709002 | MS.gene059084:CDS |
| CGAAACTCATTCCAACTATA+AGG | 0.319764 | 1.2:-10708688 | None:intergenic |
| TGACTTTATTGAAGAGAATC+AGG | 0.331103 | 1.2:+10707226 | MS.gene059084:CDS |
| ACATCTTAACAAGTTCATTC+TGG | 0.335369 | 1.2:-10707403 | None:intergenic |
| AGGTCGTTCACCAGAGTATA+TGG | 0.346065 | 1.2:+10707733 | MS.gene059084:CDS |
| TCACCAGAGTATATGGAATA+TGG | 0.350785 | 1.2:+10707740 | MS.gene059084:CDS |
| CTAGCAATGTTTGCAAGGAT+TGG | 0.374653 | 1.2:-10708826 | None:intergenic |
| ATAATCAGCATTGGGAAAAT+GGG | 0.377180 | 1.2:+10708428 | MS.gene059084:CDS |
| AAACATTGCTAGAGAGGCTT+TGG | 0.377745 | 1.2:+10708837 | MS.gene059084:CDS |
| TTGCTCTTGTATTTGATCCT+AGG | 0.382221 | 1.2:+10708485 | MS.gene059084:CDS |
| GTATCATCGGCTCGCTTTGT+TGG | 0.389838 | 1.2:+10707284 | MS.gene059084:CDS |
| TATCATCGGCTCGCTTTGTT+GGG | 0.392928 | 1.2:+10707285 | MS.gene059084:CDS |
| GTGATGCAGTTCAATATATA+AGG | 0.395146 | 1.2:+10707990 | MS.gene059084:CDS |
| CAAGTGCACACTCAGACGTT+AGG | 0.395447 | 1.2:-10708876 | None:intergenic |
| TAGTACTATATATATGTTAG+AGG | 0.405205 | 1.2:+10708318 | MS.gene059084:CDS |
| ATGTTAGAGGTATTTGGAAT+TGG | 0.409033 | 1.2:+10708331 | MS.gene059084:CDS |
| TCATCTCCTTCTATATTGTC+TGG | 0.409357 | 1.2:+10708013 | MS.gene059084:CDS |
| TCAAATCCAGACAATATAGA+AGG | 0.422190 | 1.2:-10708019 | None:intergenic |
| TATAGTACTAGTAACATTAG+AGG | 0.424234 | 1.2:-10708305 | None:intergenic |
| TCTCTTCAATAAAGTCATCT+TGG | 0.424426 | 1.2:-10707220 | None:intergenic |
| TATGTTCACAAGTTAGAAAA+GGG | 0.425796 | 1.2:+10708187 | MS.gene059084:CDS |
| AGTGAGGAAACACTAAATTT+CGG | 0.441138 | 1.2:-10707497 | None:intergenic |
| AGCATCCTTAATCAATCATC+AGG | 0.443542 | 1.2:-10709161 | None:intergenic |
| ATAGAGATCGGTCAGATGAT+TGG | 0.447056 | 1.2:+10707309 | MS.gene059084:CDS |
| TTGAGTGGTGCTTGAATGCT+TGG | 0.450691 | 1.2:+10707765 | MS.gene059084:CDS |
| CACTTGTCTGCACACATGAT+TGG | 0.451463 | 1.2:+10708959 | MS.gene059084:CDS |
| TCCAGTTATTATCAATAAAG+TGG | 0.451646 | 1.2:-10707673 | None:intergenic |
| CTTTCAAAACGAAGGTGTCC+AGG | 0.454859 | 1.2:-10707874 | None:intergenic |
| TAGAGATCGGTCAGATGATT+GGG | 0.457439 | 1.2:+10707310 | MS.gene059084:CDS |
| GTATGTTCACAAGTTAGAAA+AGG | 0.457559 | 1.2:+10708186 | MS.gene059084:CDS |
| AGAATTTCAAAAGTTTCTAA+AGG | 0.458618 | 1.2:+10707466 | MS.gene059084:CDS |
| TTATCAGATTCGATGCTTAA+CGG | 0.458691 | 1.2:+10707838 | MS.gene059084:CDS |
| AAAGCATCAAAGGGCATTTG+AGG | 0.459348 | 1.2:+10708141 | MS.gene059084:CDS |
| GAATTTGTCATATGAGATGT+TGG | 0.477507 | 1.2:+10708108 | MS.gene059084:CDS |
| TAGCTATACAGTGTACATTC+AGG | 0.477783 | 1.2:-10708387 | None:intergenic |
| GTTCATTCTGGCAAGCCTCT+TGG | 0.483141 | 1.2:-10707391 | None:intergenic |
| ACAGTGTACATTCAGGTCCT+TGG | 0.500152 | 1.2:-10708380 | None:intergenic |
| GTAAAGAGGATCCTTATAGT+TGG | 0.505450 | 1.2:+10708677 | MS.gene059084:CDS |
| TTTGATCCTAGGTACAAAGT+TGG | 0.507835 | 1.2:+10708496 | MS.gene059084:CDS |
| ATATATCCAACTTTGTACCT+AGG | 0.508334 | 1.2:-10708502 | None:intergenic |
| CAAGAAAAGATTGAAAGTAA+AGG | 0.510008 | 1.2:+10708055 | MS.gene059084:CDS |
| GGAGGTACTATAATCAGCAT+TGG | 0.511459 | 1.2:+10708419 | MS.gene059084:CDS |
| GAGGTACTATAATCAGCATT+GGG | 0.511698 | 1.2:+10708420 | MS.gene059084:CDS |
| CCTTGCAAACATTGCTAGAG+AGG | 0.513647 | 1.2:+10708831 | MS.gene059084:CDS |
| AAGTCATCTTGGTCACTCAT+TGG | 0.513648 | 1.2:-10707209 | None:intergenic |
| TAGTGTTTCCTCACTCTCAC+AGG | 0.515775 | 1.2:+10707505 | MS.gene059084:CDS |
| ATGGTAACATTAAGTAAGCC+TGG | 0.516061 | 1.2:-10708240 | None:intergenic |
| TGGTTCCAATCTTCATATGT+AGG | 0.525965 | 1.2:-10708220 | None:intergenic |
| GTGTTCCTACATATGAAGAT+TGG | 0.528784 | 1.2:+10708215 | MS.gene059084:CDS |
| AGGCTGCTTTAAAGCATCAA+AGG | 0.529819 | 1.2:+10708131 | MS.gene059084:CDS |
| TTGAACATGTAATATCTAGT+TGG | 0.531858 | 1.2:-10709127 | None:intergenic |
| AAAGCACAATTTGATGAAGA+AGG | 0.531971 | 1.2:+10708655 | MS.gene059084:CDS |
| GCTTTGTTGGGCATAGAGAT+CGG | 0.532380 | 1.2:+10707297 | MS.gene059084:CDS |
| GGCTGCTTTAAAGCATCAAA+GGG | 0.533188 | 1.2:+10708132 | MS.gene059084:CDS |
| TGAGCTAAATAAGTATTTGG+AGG | 0.533278 | 1.2:+10708738 | MS.gene059084:CDS |
| AAGTGCACACTCAGACGTTA+GGG | 0.533658 | 1.2:-10708875 | None:intergenic |
| GTATTGTTAGAGCCAAGTGC+TGG | 0.534057 | 1.2:-10707257 | None:intergenic |
| ACTGTATAGCTATAACGATA+AGG | 0.534309 | 1.2:+10708398 | MS.gene059084:CDS |
| CAGGTTGCTACTCCAGCACT+TGG | 0.535820 | 1.2:+10707245 | MS.gene059084:CDS |
| CTAACGTCTGAGTGTGCACT+TGG | 0.537303 | 1.2:+10708877 | MS.gene059084:CDS |
| TACAAATGAAATAGGAATGT+CGG | 0.537906 | 1.2:-10707435 | None:intergenic |
| TCACTTTACTGAAGAGCAAA+GGG | 0.540001 | 1.2:+10707334 | MS.gene059084:CDS |
| CTAAACTTTCTTCCAACCGT+AGG | 0.546817 | 1.2:+10707713 | MS.gene059084:CDS |
| TCAATCATCAGGAATAGTAA+AGG | 0.549034 | 1.2:-10709150 | None:intergenic |
| TAACAATACTAGTGTATCAT+CGG | 0.549701 | 1.2:+10707271 | MS.gene059084:CDS |
| AGCAAAGGGATGGAAGCAAA+AGG | 0.552546 | 1.2:+10707348 | MS.gene059084:CDS |
| AAGTAAAGGATATGTTTACA+TGG | 0.552999 | 1.2:+10708069 | MS.gene059084:CDS |
| CCTCTCTAGCAATGTTTGCA+AGG | 0.555542 | 1.2:-10708831 | None:intergenic |
| CCAGTTATTATCAATAAAGT+GGG | 0.556998 | 1.2:-10707672 | None:intergenic |
| TTTGAACATGATATTGAAGG+AGG | 0.558830 | 1.2:+10707931 | MS.gene059084:CDS |
| ATACTCTGGTGAACGACCTA+CGG | 0.562055 | 1.2:-10707729 | None:intergenic |
| TGAGTGGTGCTTGAATGCTT+GGG | 0.563487 | 1.2:+10707766 | MS.gene059084:CDS |
| ATTTGATGAAGAAGGTAAAG+AGG | 0.563809 | 1.2:+10708663 | MS.gene059084:CDS |
| ATCTGACAAGTTTGACCAAG+AGG | 0.567863 | 1.2:+10707376 | MS.gene059084:CDS |
| ATCACTTTACTGAAGAGCAA+AGG | 0.574572 | 1.2:+10707333 | MS.gene059084:CDS |
| ATACCATATTCCATATACTC+TGG | 0.575540 | 1.2:-10707743 | None:intergenic |
| ATTTGGATATCTTAAATTGG+TGG | 0.579061 | 1.2:+10708782 | MS.gene059084:CDS |
| TCTGGTGAACGACCTACGGT+TGG | 0.582038 | 1.2:-10707725 | None:intergenic |
| GTAATCTCCTTTCAAAACGA+AGG | 0.582588 | 1.2:-10707882 | None:intergenic |
| TAGCCAGCTGTGTCATTCCA+AGG | 0.585995 | 1.2:+10708363 | MS.gene059084:CDS |
| TTTACATGGATATTGAAACT+AGG | 0.588702 | 1.2:+10708083 | MS.gene059084:CDS |
| AGGCAGCTAATTTGAAACAG+AGG | 0.598299 | 1.2:+10708560 | MS.gene059084:CDS |
| TAATCAGCATTGGGAAAATG+GGG | 0.601883 | 1.2:+10708429 | MS.gene059084:CDS |
| TACATATGAAGATTGGAACC+AGG | 0.602507 | 1.2:+10708222 | MS.gene059084:CDS |
| AAATGTAGCCTGTGAGAGTG+AGG | 0.603791 | 1.2:-10707513 | None:intergenic |
| GGTCCTTGGAATGACACAGC+TGG | 0.604193 | 1.2:-10708366 | None:intergenic |
| TCAGACGTTAGGGTTGAGAC+AGG | 0.607399 | 1.2:-10708865 | None:intergenic |
| AGCTTTCTTGCACAACATTG+TGG | 0.614198 | 1.2:+10707584 | MS.gene059084:CDS |
| GATTTGGAAAAGCTTAAGCA+AGG | 0.625887 | 1.2:+10709018 | MS.gene059084:CDS |
| TTTCAAAACGAAGGTGTCCA+GGG | 0.627557 | 1.2:-10707873 | None:intergenic |
| AACGGAAAAGTTAATGACCC+TGG | 0.627726 | 1.2:+10707856 | MS.gene059084:CDS |
| TTTACTGAAGAGCAAAGGGA+TGG | 0.630323 | 1.2:+10707338 | MS.gene059084:CDS |
| TCACAAGTTAGAAAAGGGGA+AGG | 0.641530 | 1.2:+10708192 | MS.gene059084:CDS |
| TTTGCCTCAGCATTGACACA+TGG | 0.648207 | 1.2:+10707612 | MS.gene059084:CDS |
| TTTGTCATATGAGATGTTGG+AGG | 0.654353 | 1.2:+10708111 | MS.gene059084:CDS |
| CGAATCTGATAATCATATCG+AGG | 0.655355 | 1.2:-10707827 | None:intergenic |
| ACATGGATATTGAAACTAGG+TGG | 0.659888 | 1.2:+10708086 | MS.gene059084:CDS |
| AAATGAAATAGGAATGTCGG+TGG | 0.664317 | 1.2:-10707432 | None:intergenic |
| ATGTTCACAAGTTAGAAAAG+GGG | 0.664602 | 1.2:+10708188 | MS.gene059084:CDS |
| TGCACTTGGTAATAATGCAA+AGG | 0.665864 | 1.2:+10708891 | MS.gene059084:CDS |
| CACAAGTTAGAAAAGGGGAA+GGG | 0.669099 | 1.2:+10708193 | MS.gene059084:CDS |
| GGAAGATACAGAGACCTCTG+AGG | 0.684881 | 1.2:+10708759 | MS.gene059084:CDS |
| AATCAGCATTGGGAAAATGG+GGG | 0.686655 | 1.2:+10708430 | MS.gene059084:CDS |
| TAAGATATCCAAATCCTCAG+AGG | 0.694535 | 1.2:-10708773 | None:intergenic |
| GTATAGCTATAACGATAAGG+AGG | 0.694807 | 1.2:+10708401 | MS.gene059084:CDS |
| AAGTCCATGTGTCAATGCTG+AGG | 0.713105 | 1.2:-10707616 | None:intergenic |
| ATATGGAATATGGTATTGAG+TGG | 0.720405 | 1.2:+10707750 | MS.gene059084:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAGTTGGATATATAAAT+TGG | + | chr1.2:10708509-10708528 | MS.gene059084:CDS | 20.0% |
| !! | AGAATTTCAAAAGTTTCTAA+AGG | + | chr1.2:10707466-10707485 | MS.gene059084:CDS | 20.0% |
| !! | ATCATTATATTCCTCAAAAA+GGG | - | chr1.2:10708605-10708624 | None:intergenic | 20.0% |
| !! | TAGTACTATATATATGTTAG+AGG | + | chr1.2:10708318-10708337 | MS.gene059084:CDS | 20.0% |
| !!! | ATATATATGTTAGAGGTATT+TGG | + | chr1.2:10708325-10708344 | MS.gene059084:CDS | 20.0% |
| !!! | TATTTTGAACATGATATTGA+AGG | + | chr1.2:10707928-10707947 | MS.gene059084:CDS | 20.0% |
| !!! | TCATGATATTTTAACTCTAT+GGG | + | chr1.2:10707538-10707557 | MS.gene059084:CDS | 20.0% |
| ! | AAGTAAAGGATATGTTTACA+TGG | + | chr1.2:10708069-10708088 | MS.gene059084:CDS | 25.0% |
| ! | AGGATTTGGATATCTTAAAT+TGG | + | chr1.2:10708779-10708798 | MS.gene059084:CDS | 25.0% |
| ! | ATCTGAGCTAAATAAGTATT+TGG | + | chr1.2:10708735-10708754 | MS.gene059084:CDS | 25.0% |
| ! | ATTTGGATATCTTAAATTGG+TGG | + | chr1.2:10708782-10708801 | MS.gene059084:CDS | 25.0% |
| ! | CAAGAAAAGATTGAAAGTAA+AGG | + | chr1.2:10708055-10708074 | MS.gene059084:CDS | 25.0% |
| ! | CATCATTATATTCCTCAAAA+AGG | - | chr1.2:10708606-10708625 | None:intergenic | 25.0% |
| ! | CCAGTTATTATCAATAAAGT+GGG | - | chr1.2:10707675-10707694 | None:intergenic | 25.0% |
| ! | TAACAATACTAGTGTATCAT+CGG | + | chr1.2:10707271-10707290 | MS.gene059084:CDS | 25.0% |
| ! | TACAAATGAAATAGGAATGT+CGG | - | chr1.2:10707438-10707457 | None:intergenic | 25.0% |
| ! | TATAGTACTAGTAACATTAG+AGG | - | chr1.2:10708308-10708327 | None:intergenic | 25.0% |
| ! | TATGTTCACAAGTTAGAAAA+GGG | + | chr1.2:10708187-10708206 | MS.gene059084:CDS | 25.0% |
| ! | TCATGAAAGATCTTCAAAAA+TGG | - | chr1.2:10708262-10708281 | None:intergenic | 25.0% |
| ! | TCATTCTCTACAAATGAAAT+AGG | - | chr1.2:10707446-10707465 | None:intergenic | 25.0% |
| ! | TCCAGTTATTATCAATAAAG+TGG | - | chr1.2:10707676-10707695 | None:intergenic | 25.0% |
| ! | TTGAACATGTAATATCTAGT+TGG | - | chr1.2:10709130-10709149 | None:intergenic | 25.0% |
| ! | TTTACATGGATATTGAAACT+AGG | + | chr1.2:10708083-10708102 | MS.gene059084:CDS | 25.0% |
| !! | AGAAAACATGATGCTTATTT+TGG | + | chr1.2:10709043-10709062 | MS.gene059084:intron | 25.0% |
| !!! | CTCATGATATTTTAACTCTA+TGG | + | chr1.2:10707537-10707556 | MS.gene059084:CDS | 25.0% |
| !!! | CTTTTTGAGGAATATAATGA+TGG | + | chr1.2:10708604-10708623 | MS.gene059084:CDS | 25.0% |
| !!! | TCAGATTTTTAATTCAGTTG+AGG | + | chr1.2:10708540-10708559 | MS.gene059084:CDS | 25.0% |
| AAAGCACAATTTGATGAAGA+AGG | + | chr1.2:10708655-10708674 | MS.gene059084:CDS | 30.0% | |
| ACATCTTAACAAGTTCATTC+TGG | - | chr1.2:10707406-10707425 | None:intergenic | 30.0% | |
| ACTGTATAGCTATAACGATA+AGG | + | chr1.2:10708398-10708417 | MS.gene059084:CDS | 30.0% | |
| AGTGAGGAAACACTAAATTT+CGG | - | chr1.2:10707500-10707519 | None:intergenic | 30.0% | |
| ATACCATATTCCATATACTC+TGG | - | chr1.2:10707746-10707765 | None:intergenic | 30.0% | |
| ATATATCCAACTTTGTACCT+AGG | - | chr1.2:10708505-10708524 | None:intergenic | 30.0% | |
| ATGTTCACAAGTTAGAAAAG+GGG | + | chr1.2:10708188-10708207 | MS.gene059084:CDS | 30.0% | |
| ATTTGATGAAGAAGGTAAAG+AGG | + | chr1.2:10708663-10708682 | MS.gene059084:CDS | 30.0% | |
| GAATTTGTCATATGAGATGT+TGG | + | chr1.2:10708108-10708127 | MS.gene059084:CDS | 30.0% | |
| GTATGTTCACAAGTTAGAAA+AGG | + | chr1.2:10708186-10708205 | MS.gene059084:CDS | 30.0% | |
| GTGATGCAGTTCAATATATA+AGG | + | chr1.2:10707990-10708009 | MS.gene059084:CDS | 30.0% | |
| TCAAATCCAGACAATATAGA+AGG | - | chr1.2:10708022-10708041 | None:intergenic | 30.0% | |
| TCAATCATCAGGAATAGTAA+AGG | - | chr1.2:10709153-10709172 | None:intergenic | 30.0% | |
| TCTCTTCAATAAAGTCATCT+TGG | - | chr1.2:10707223-10707242 | None:intergenic | 30.0% | |
| TGACTTTATTGAAGAGAATC+AGG | + | chr1.2:10707226-10707245 | MS.gene059084:CDS | 30.0% | |
| TGAGCTAAATAAGTATTTGG+AGG | + | chr1.2:10708738-10708757 | MS.gene059084:CDS | 30.0% | |
| TTATCAGATTCGATGCTTAA+CGG | + | chr1.2:10707838-10707857 | MS.gene059084:CDS | 30.0% | |
| TTTGAACATGATATTGAAGG+AGG | + | chr1.2:10707931-10707950 | MS.gene059084:CDS | 30.0% | |
| ! | ACTTTTTGTCATGTAACTCA+AGG | - | chr1.2:10708168-10708187 | None:intergenic | 30.0% |
| ! | ATAATCAGCATTGGGAAAAT+GGG | + | chr1.2:10708428-10708447 | MS.gene059084:CDS | 30.0% |
| ! | ATATGGAATATGGTATTGAG+TGG | + | chr1.2:10707750-10707769 | MS.gene059084:CDS | 30.0% |
| ! | CCCACTTTATTGATAATAAC+TGG | + | chr1.2:10707672-10707691 | MS.gene059084:CDS | 30.0% |
| ! | TATAATCAGCATTGGGAAAA+TGG | + | chr1.2:10708427-10708446 | MS.gene059084:CDS | 30.0% |
| ! | TTTTTGTCTTTGTGCAGAAA+TGG | + | chr1.2:10709100-10709119 | MS.gene059084:intron | 30.0% |
| !! | ATGTTAGAGGTATTTGGAAT+TGG | + | chr1.2:10708331-10708350 | MS.gene059084:CDS | 30.0% |
| !! | TTGTTTGAAATCCCTTTTTG+AGG | + | chr1.2:10708591-10708610 | MS.gene059084:CDS | 30.0% |
| !!! | CATGATGCTTATTTTGGAAA+AGG | + | chr1.2:10709049-10709068 | MS.gene059084:intron | 30.0% |
| AAATGAAATAGGAATGTCGG+TGG | - | chr1.2:10707435-10707454 | None:intergenic | 35.0% | |
| ACATGGATATTGAAACTAGG+TGG | + | chr1.2:10708086-10708105 | MS.gene059084:CDS | 35.0% | |
| ATCACTTTACTGAAGAGCAA+AGG | + | chr1.2:10707333-10707352 | MS.gene059084:CDS | 35.0% | |
| ATGGTAACATTAAGTAAGCC+TGG | - | chr1.2:10708243-10708262 | None:intergenic | 35.0% | |
| CGAAACTCATTCCAACTATA+AGG | - | chr1.2:10708691-10708710 | None:intergenic | 35.0% | |
| CGAATCTGATAATCATATCG+AGG | - | chr1.2:10707830-10707849 | None:intergenic | 35.0% | |
| GATTTGGAAAAGCTTAAGCA+AGG | + | chr1.2:10709018-10709037 | MS.gene059084:CDS | 35.0% | |
| GTAAAGAGGATCCTTATAGT+TGG | + | chr1.2:10708677-10708696 | MS.gene059084:CDS | 35.0% | |
| GTAATCTCCTTTCAAAACGA+AGG | - | chr1.2:10707885-10707904 | None:intergenic | 35.0% | |
| GTATAGCTATAACGATAAGG+AGG | + | chr1.2:10708401-10708420 | MS.gene059084:CDS | 35.0% | |
| GTGTTCCTACATATGAAGAT+TGG | + | chr1.2:10708215-10708234 | MS.gene059084:CDS | 35.0% | |
| GTTAGACTAAAAATGCGACT+CGG | - | chr1.2:10707794-10707813 | None:intergenic | 35.0% | |
| TAAGATATCCAAATCCTCAG+AGG | - | chr1.2:10708776-10708795 | None:intergenic | 35.0% | |
| TACATATGAAGATTGGAACC+AGG | + | chr1.2:10708222-10708241 | MS.gene059084:CDS | 35.0% | |
| TAGCTATACAGTGTACATTC+AGG | - | chr1.2:10708390-10708409 | None:intergenic | 35.0% | |
| TCACCAGAGTATATGGAATA+TGG | + | chr1.2:10707740-10707759 | MS.gene059084:CDS | 35.0% | |
| TCACTTTACTGAAGAGCAAA+GGG | + | chr1.2:10707334-10707353 | MS.gene059084:CDS | 35.0% | |
| TCATCTCCTTCTATATTGTC+TGG | + | chr1.2:10708013-10708032 | MS.gene059084:CDS | 35.0% | |
| TGGTTCCAATCTTCATATGT+AGG | - | chr1.2:10708223-10708242 | None:intergenic | 35.0% | |
| TTGCTCTTGTATTTGATCCT+AGG | + | chr1.2:10708485-10708504 | MS.gene059084:CDS | 35.0% | |
| TTTGATCCTAGGTACAAAGT+TGG | + | chr1.2:10708496-10708515 | MS.gene059084:CDS | 35.0% | |
| TTTGTCATATGAGATGTTGG+AGG | + | chr1.2:10708111-10708130 | MS.gene059084:CDS | 35.0% | |
| ! | GAGGTACTATAATCAGCATT+GGG | + | chr1.2:10708420-10708439 | MS.gene059084:CDS | 35.0% |
| ! | TAATCAGCATTGGGAAAATG+GGG | + | chr1.2:10708429-10708448 | MS.gene059084:CDS | 35.0% |
| ! | TGCACTTGGTAATAATGCAA+AGG | + | chr1.2:10708891-10708910 | MS.gene059084:CDS | 35.0% |
| AAACATTGCTAGAGAGGCTT+TGG | + | chr1.2:10708837-10708856 | MS.gene059084:CDS | 40.0% | |
| AACGGAAAAGTTAATGACCC+TGG | + | chr1.2:10707856-10707875 | MS.gene059084:CDS | 40.0% | |
| AGCTTTCTTGCACAACATTG+TGG | + | chr1.2:10707584-10707603 | MS.gene059084:CDS | 40.0% | |
| ATAGAGATCGGTCAGATGAT+TGG | + | chr1.2:10707309-10707328 | MS.gene059084:CDS | 40.0% | |
| ATCTGACAAGTTTGACCAAG+AGG | + | chr1.2:10707376-10707395 | MS.gene059084:CDS | 40.0% | |
| CACAAGTTAGAAAAGGGGAA+GGG | + | chr1.2:10708193-10708212 | MS.gene059084:CDS | 40.0% | |
| CTAAACTTTCTTCCAACCGT+AGG | + | chr1.2:10707713-10707732 | MS.gene059084:CDS | 40.0% | |
| CTAGCAATGTTTGCAAGGAT+TGG | - | chr1.2:10708829-10708848 | None:intergenic | 40.0% | |
| GTTGCGTTCAAACAAGGATT+TGG | + | chr1.2:10709002-10709021 | MS.gene059084:CDS | 40.0% | |
| TAGAGATCGGTCAGATGATT+GGG | + | chr1.2:10707310-10707329 | MS.gene059084:CDS | 40.0% | |
| TCACAAGTTAGAAAAGGGGA+AGG | + | chr1.2:10708192-10708211 | MS.gene059084:CDS | 40.0% | |
| TTTACTGAAGAGCAAAGGGA+TGG | + | chr1.2:10707338-10707357 | MS.gene059084:CDS | 40.0% | |
| ! | AATCAGCATTGGGAAAATGG+GGG | + | chr1.2:10708430-10708449 | MS.gene059084:CDS | 40.0% |
| ! | AGGCAGCTAATTTGAAACAG+AGG | + | chr1.2:10708560-10708579 | MS.gene059084:CDS | 40.0% |
| ! | CTTTTCGTTGCGTTCAAACA+AGG | + | chr1.2:10708996-10709015 | MS.gene059084:CDS | 40.0% |
| ! | TGCACACATGATTGGCTATA+TGG | + | chr1.2:10708967-10708986 | MS.gene059084:CDS | 40.0% |
| !! | AAAGCATCAAAGGGCATTTG+AGG | + | chr1.2:10708141-10708160 | MS.gene059084:CDS | 40.0% |
| !! | AGGCTGCTTTAAAGCATCAA+AGG | + | chr1.2:10708131-10708150 | MS.gene059084:CDS | 40.0% |
| !! | GGAGGTACTATAATCAGCAT+TGG | + | chr1.2:10708419-10708438 | MS.gene059084:CDS | 40.0% |
| !! | GGCTGCTTTAAAGCATCAAA+GGG | + | chr1.2:10708132-10708151 | MS.gene059084:CDS | 40.0% |
| !! | TTTCAAAACGAAGGTGTCCA+GGG | - | chr1.2:10707876-10707895 | None:intergenic | 40.0% |
| AAATGTAGCCTGTGAGAGTG+AGG | - | chr1.2:10707516-10707535 | None:intergenic | 45.0% | |
| AAGTCCATGTGTCAATGCTG+AGG | - | chr1.2:10707619-10707638 | None:intergenic | 45.0% | |
| AAGTGCACACTCAGACGTTA+GGG | - | chr1.2:10708878-10708897 | None:intergenic | 45.0% | |
| ACAGTGTACATTCAGGTCCT+TGG | - | chr1.2:10708383-10708402 | None:intergenic | 45.0% | |
| AGCAAAGGGATGGAAGCAAA+AGG | + | chr1.2:10707348-10707367 | MS.gene059084:CDS | 45.0% | |
| AGGTCGTTCACCAGAGTATA+TGG | + | chr1.2:10707733-10707752 | MS.gene059084:CDS | 45.0% | |
| ATACTCTGGTGAACGACCTA+CGG | - | chr1.2:10707732-10707751 | None:intergenic | 45.0% | |
| CACTTGTCTGCACACATGAT+TGG | + | chr1.2:10708959-10708978 | MS.gene059084:CDS | 45.0% | |
| CCTCTCTAGCAATGTTTGCA+AGG | - | chr1.2:10708834-10708853 | None:intergenic | 45.0% | |
| CCTTGCAAACATTGCTAGAG+AGG | + | chr1.2:10708831-10708850 | MS.gene059084:CDS | 45.0% | |
| GTATTGTTAGAGCCAAGTGC+TGG | - | chr1.2:10707260-10707279 | None:intergenic | 45.0% | |
| TAGTGTTTCCTCACTCTCAC+AGG | + | chr1.2:10707505-10707524 | MS.gene059084:CDS | 45.0% | |
| TGAGTGGTGCTTGAATGCTT+GGG | + | chr1.2:10707766-10707785 | MS.gene059084:CDS | 45.0% | |
| TTGAGTGGTGCTTGAATGCT+TGG | + | chr1.2:10707765-10707784 | MS.gene059084:CDS | 45.0% | |
| ! | GCTTTGTTGGGCATAGAGAT+CGG | + | chr1.2:10707297-10707316 | MS.gene059084:CDS | 45.0% |
| ! | TACAGAGACCTCTGAGGATT+TGG | + | chr1.2:10708765-10708784 | MS.gene059084:CDS | 45.0% |
| !! | CTGGACACCTTCGTTTTGAA+AGG | + | chr1.2:10707875-10707894 | MS.gene059084:CDS | 45.0% |
| !! | CTTTCAAAACGAAGGTGTCC+AGG | - | chr1.2:10707877-10707896 | None:intergenic | 45.0% |
| !! | TATCATCGGCTCGCTTTGTT+GGG | + | chr1.2:10707285-10707304 | MS.gene059084:CDS | 45.0% |
| !! | TTTGCCTCAGCATTGACACA+TGG | + | chr1.2:10707612-10707631 | MS.gene059084:CDS | 45.0% |
| CAAGTGCACACTCAGACGTT+AGG | - | chr1.2:10708879-10708898 | None:intergenic | 50.0% | |
| CTAACGTCTGAGTGTGCACT+TGG | + | chr1.2:10708877-10708896 | MS.gene059084:CDS | 50.0% | |
| GGAAGATACAGAGACCTCTG+AGG | + | chr1.2:10708759-10708778 | MS.gene059084:CDS | 50.0% | |
| GTTCATTCTGGCAAGCCTCT+TGG | - | chr1.2:10707394-10707413 | None:intergenic | 50.0% | |
| TCAGACGTTAGGGTTGAGAC+AGG | - | chr1.2:10708868-10708887 | None:intergenic | 50.0% | |
| ! | TAGCCAGCTGTGTCATTCCA+AGG | + | chr1.2:10708363-10708382 | MS.gene059084:CDS | 50.0% |
| !! | GTATCATCGGCTCGCTTTGT+TGG | + | chr1.2:10707284-10707303 | MS.gene059084:CDS | 50.0% |
| CAGGTTGCTACTCCAGCACT+TGG | + | chr1.2:10707245-10707264 | MS.gene059084:CDS | 55.0% | |
| GGTCCTTGGAATGACACAGC+TGG | - | chr1.2:10708369-10708388 | None:intergenic | 55.0% | |
| TCTGGTGAACGACCTACGGT+TGG | - | chr1.2:10707728-10707747 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 10707212 | 10709172 | 10707212 | ID=MS.gene059084 |
| chr1.2 | mRNA | 10707212 | 10709172 | 10707212 | ID=MS.gene059084.t1;Parent=MS.gene059084 |
| chr1.2 | exon | 10707212 | 10709039 | 10707212 | ID=MS.gene059084.t1.exon1;Parent=MS.gene059084.t1 |
| chr1.2 | CDS | 10707212 | 10709039 | 10707212 | ID=cds.MS.gene059084.t1;Parent=MS.gene059084.t1 |
| chr1.2 | exon | 10709117 | 10709172 | 10709117 | ID=MS.gene059084.t1.exon2;Parent=MS.gene059084.t1 |
| chr1.2 | CDS | 10709117 | 10709172 | 10709117 | ID=cds.MS.gene059084.t1;Parent=MS.gene059084.t1 |
| Gene Sequence |
| Protein sequence |
