Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43452.t1 | XP_013458674.1 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.00E+00 | 1184.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43452.t1 | Q9FIK1 | 61.5 | 519 | 194 | 4 | 1 | 516 | 1 | 516 | 3.0e-185 | 649.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43452.t1 | G7ZZV4 | 99.3 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0e+00 | 1184.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051568 | MS.gene43452 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene43452 | 0.808576 | 2.89E-50 | -1.69E-46 |
| MS.gene054581 | MS.gene43452 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene43452 | 0.837774 | 4.26E-57 | -1.69E-46 |
| MS.gene055357 | MS.gene43452 | 0.816017 | 6.87E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene43452 | 0.828421 | 9.08E-55 | -1.69E-46 |
| MS.gene055804 | MS.gene43452 | 0.824082 | 9.79E-54 | -1.69E-46 |
| MS.gene056953 | MS.gene43452 | 0.803319 | 3.69E-49 | -1.69E-46 |
| MS.gene058736 | MS.gene43452 | 0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene058935 | MS.gene43452 | 0.800775 | 1.23E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43452 | MS.gene29159 | PPI |
| MS.gene43452 | MS.gene027737 | PPI |
| MS.gene44279 | MS.gene43452 | PPI |
| MS.gene43452 | MS.gene86230 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43452.t1 | MTR_4g134210 | 99.339 | 605 | 4 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1244 |
| MS.gene43452.t1 | MTR_2g027410 | 67.110 | 602 | 165 | 6 | 1 | 600 | 1 | 571 | 0.0 | 810 |
| MS.gene43452.t1 | MTR_2g027410 | 66.792 | 530 | 143 | 6 | 73 | 600 | 1 | 499 | 0.0 | 705 |
| MS.gene43452.t1 | MTR_5g032780 | 48.276 | 522 | 224 | 6 | 1 | 477 | 1 | 521 | 1.59e-161 | 476 |
| MS.gene43452.t1 | MTR_8g069330 | 46.337 | 505 | 224 | 6 | 1 | 477 | 1 | 486 | 6.56e-144 | 430 |
| MS.gene43452.t1 | MTR_5g015790 | 42.771 | 498 | 249 | 8 | 1 | 476 | 1 | 484 | 5.05e-133 | 403 |
| MS.gene43452.t1 | MTR_1g014070 | 41.212 | 495 | 260 | 7 | 1 | 473 | 1 | 486 | 1.13e-130 | 396 |
| MS.gene43452.t1 | MTR_1g106430 | 39.279 | 499 | 264 | 7 | 1 | 473 | 1 | 486 | 2.51e-121 | 372 |
| MS.gene43452.t1 | MTR_4g093850 | 37.079 | 534 | 278 | 9 | 5 | 484 | 23 | 552 | 4.37e-112 | 350 |
| MS.gene43452.t1 | MTR_2g009340 | 36.723 | 531 | 279 | 7 | 5 | 479 | 23 | 552 | 6.87e-109 | 342 |
| MS.gene43452.t1 | MTR_2g018750 | 35.341 | 498 | 295 | 6 | 1 | 473 | 1 | 496 | 1.13e-97 | 311 |
| MS.gene43452.t1 | MTR_5g016060 | 35.269 | 465 | 283 | 7 | 22 | 475 | 36 | 493 | 7.98e-93 | 298 |
| MS.gene43452.t1 | MTR_4g022330 | 35.974 | 467 | 275 | 6 | 25 | 475 | 33 | 491 | 6.29e-91 | 293 |
| MS.gene43452.t1 | MTR_8g090220 | 34.647 | 482 | 267 | 8 | 19 | 471 | 45 | 507 | 2.71e-90 | 288 |
| MS.gene43452.t1 | MTR_4g093850 | 35.356 | 478 | 253 | 8 | 5 | 430 | 23 | 496 | 3.82e-90 | 288 |
| MS.gene43452.t1 | MTR_8g090220 | 33.520 | 537 | 298 | 10 | 19 | 526 | 45 | 551 | 4.01e-90 | 292 |
| MS.gene43452.t1 | MTR_4g095430 | 36.364 | 462 | 279 | 7 | 23 | 475 | 10 | 465 | 4.99e-90 | 290 |
| MS.gene43452.t1 | MTR_2g084595 | 35.504 | 476 | 279 | 9 | 24 | 473 | 21 | 494 | 2.77e-87 | 284 |
| MS.gene43452.t1 | MTR_8g078900 | 33.068 | 502 | 279 | 8 | 23 | 473 | 17 | 512 | 1.07e-86 | 283 |
| MS.gene43452.t1 | MTR_1g064360 | 32.460 | 496 | 293 | 9 | 1 | 473 | 1 | 477 | 1.42e-86 | 280 |
| MS.gene43452.t1 | MTR_1g094850 | 33.068 | 502 | 301 | 7 | 1 | 475 | 1 | 494 | 3.00e-86 | 281 |
| MS.gene43452.t1 | MTR_3g062540 | 32.391 | 460 | 288 | 5 | 21 | 475 | 19 | 460 | 2.90e-84 | 274 |
| MS.gene43452.t1 | MTR_2g048390 | 35.088 | 456 | 262 | 10 | 1 | 425 | 1 | 453 | 4.33e-81 | 263 |
| MS.gene43452.t1 | MTR_8g078900 | 32.787 | 488 | 271 | 8 | 37 | 473 | 1 | 482 | 8.26e-81 | 267 |
| MS.gene43452.t1 | MTR_7g108290 | 32.977 | 561 | 310 | 13 | 17 | 532 | 27 | 566 | 1.32e-78 | 262 |
| MS.gene43452.t1 | MTR_8g078900 | 34.096 | 437 | 251 | 7 | 68 | 473 | 42 | 472 | 4.12e-78 | 259 |
| MS.gene43452.t1 | MTR_5g075640 | 31.723 | 476 | 295 | 4 | 22 | 484 | 21 | 479 | 1.76e-77 | 257 |
| MS.gene43452.t1 | MTR_1g088885 | 31.835 | 556 | 320 | 12 | 17 | 532 | 27 | 563 | 4.22e-77 | 257 |
| MS.gene43452.t1 | MTR_3g062540 | 32.644 | 435 | 270 | 5 | 46 | 475 | 2 | 418 | 4.54e-76 | 251 |
| MS.gene43452.t1 | MTR_7g073980 | 32.632 | 475 | 297 | 10 | 14 | 473 | 21 | 487 | 5.18e-74 | 249 |
| MS.gene43452.t1 | MTR_1g082690 | 31.126 | 453 | 272 | 9 | 28 | 473 | 60 | 479 | 1.11e-71 | 241 |
| MS.gene43452.t1 | MTR_2g084595 | 34.112 | 428 | 254 | 9 | 24 | 425 | 21 | 446 | 5.03e-70 | 233 |
| MS.gene43452.t1 | MTR_5g075640 | 30.752 | 452 | 283 | 4 | 46 | 484 | 2 | 436 | 7.58e-68 | 230 |
| MS.gene43452.t1 | MTR_8g078900 | 30.396 | 454 | 259 | 8 | 23 | 425 | 17 | 464 | 7.15e-64 | 218 |
| MS.gene43452.t1 | MTR_5g016060 | 32.898 | 383 | 239 | 7 | 104 | 475 | 4 | 379 | 1.35e-62 | 215 |
| MS.gene43452.t1 | MTR_8g078900 | 31.105 | 389 | 231 | 7 | 68 | 425 | 42 | 424 | 6.46e-56 | 195 |
| MS.gene43452.t1 | MTR_4g011530 | 36.207 | 290 | 168 | 5 | 201 | 485 | 46 | 323 | 9.63e-50 | 179 |
| MS.gene43452.t1 | MTR_2g102730 | 36.364 | 297 | 176 | 4 | 183 | 475 | 6 | 293 | 3.15e-49 | 177 |
| MS.gene43452.t1 | MTR_4g045767 | 30.394 | 431 | 257 | 14 | 60 | 475 | 40 | 442 | 1.17e-42 | 161 |
| MS.gene43452.t1 | MTR_4g074190 | 25.767 | 489 | 303 | 12 | 29 | 480 | 6 | 471 | 1.33e-36 | 144 |
| MS.gene43452.t1 | MTR_4g080720 | 85.714 | 70 | 10 | 0 | 1 | 70 | 1 | 70 | 1.56e-35 | 128 |
| MS.gene43452.t1 | MTR_4g074190 | 26.009 | 446 | 274 | 10 | 68 | 480 | 3 | 425 | 2.11e-35 | 140 |
| MS.gene43452.t1 | MTR_1g035720 | 26.087 | 483 | 290 | 12 | 29 | 474 | 6 | 458 | 2.64e-32 | 131 |
| MS.gene43452.t1 | MTR_4g074190 | 25.747 | 435 | 263 | 12 | 29 | 426 | 6 | 417 | 8.39e-31 | 125 |
| MS.gene43452.t1 | MTR_2g010890 | 25.798 | 376 | 240 | 12 | 100 | 461 | 8 | 358 | 1.33e-25 | 110 |
| MS.gene43452.t1 | MTR_1g105870 | 31.579 | 190 | 122 | 2 | 33 | 220 | 38 | 221 | 4.23e-22 | 96.7 |
| MS.gene43452.t1 | MTR_6g046500 | 85.714 | 49 | 7 | 0 | 22 | 70 | 1 | 49 | 5.49e-22 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43452.t1 | AT5G47800 | 64.463 | 484 | 169 | 2 | 1 | 482 | 1 | 483 | 0.0 | 673 |
| MS.gene43452.t1 | AT5G47800 | 64.463 | 484 | 169 | 2 | 1 | 482 | 1 | 483 | 0.0 | 673 |
| MS.gene43452.t1 | AT5G47800 | 64.463 | 484 | 169 | 2 | 1 | 482 | 1 | 483 | 0.0 | 673 |
| MS.gene43452.t1 | AT5G47800 | 64.463 | 484 | 169 | 2 | 1 | 482 | 114 | 596 | 0.0 | 671 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT1G67900 | 45.279 | 519 | 244 | 5 | 1 | 482 | 1 | 516 | 6.84e-152 | 451 |
| MS.gene43452.t1 | AT4G31820 | 39.139 | 534 | 276 | 10 | 1 | 511 | 1 | 508 | 6.12e-126 | 383 |
| MS.gene43452.t1 | AT3G26490 | 38.376 | 542 | 268 | 12 | 1 | 493 | 1 | 525 | 1.53e-124 | 380 |
| MS.gene43452.t1 | AT3G26490 | 38.376 | 542 | 268 | 12 | 1 | 493 | 1 | 525 | 1.53e-124 | 380 |
| MS.gene43452.t1 | AT3G26490 | 38.376 | 542 | 268 | 12 | 1 | 493 | 1 | 525 | 1.53e-124 | 380 |
| MS.gene43452.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 1.26e-123 | 379 |
| MS.gene43452.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 1.26e-123 | 379 |
| MS.gene43452.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 4.99e-121 | 370 |
| MS.gene43452.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 4.99e-121 | 370 |
| MS.gene43452.t1 | AT4G37590 | 39.736 | 531 | 273 | 12 | 1 | 513 | 1 | 502 | 6.44e-121 | 370 |
| MS.gene43452.t1 | AT2G23050 | 40.568 | 493 | 248 | 9 | 1 | 483 | 1 | 458 | 1.14e-119 | 363 |
| MS.gene43452.t1 | AT4G31820 | 38.462 | 481 | 248 | 9 | 53 | 511 | 1 | 455 | 4.99e-109 | 337 |
| MS.gene43452.t1 | AT5G67440 | 39.955 | 443 | 254 | 5 | 41 | 477 | 5 | 441 | 4.48e-106 | 330 |
| MS.gene43452.t1 | AT3G26490 | 37.552 | 482 | 234 | 12 | 1 | 435 | 1 | 462 | 3.05e-101 | 317 |
| MS.gene43452.t1 | AT5G64330 | 32.313 | 588 | 284 | 9 | 7 | 484 | 33 | 616 | 1.69e-94 | 304 |
| MS.gene43452.t1 | AT5G64330 | 32.313 | 588 | 284 | 9 | 7 | 484 | 33 | 616 | 3.87e-94 | 305 |
| MS.gene43452.t1 | AT1G30440 | 34.047 | 514 | 290 | 8 | 1 | 473 | 1 | 506 | 3.15e-91 | 295 |
| MS.gene43452.t1 | AT5G67385 | 34.542 | 469 | 291 | 8 | 23 | 482 | 22 | 483 | 5.19e-90 | 290 |
| MS.gene43452.t1 | AT5G03250 | 33.002 | 503 | 304 | 7 | 1 | 473 | 1 | 500 | 6.51e-90 | 290 |
| MS.gene43452.t1 | AT5G13600 | 34.337 | 498 | 295 | 9 | 1 | 473 | 1 | 491 | 8.63e-86 | 279 |
| MS.gene43452.t1 | AT5G64330 | 31.957 | 557 | 265 | 9 | 38 | 484 | 5 | 557 | 5.07e-85 | 277 |
| MS.gene43452.t1 | AT5G66560 | 33.398 | 515 | 277 | 8 | 23 | 473 | 16 | 528 | 5.55e-85 | 279 |
| MS.gene43452.t1 | AT5G48800 | 34.542 | 469 | 265 | 7 | 25 | 475 | 40 | 484 | 1.43e-83 | 274 |
| MS.gene43452.t1 | AT2G23050 | 39.523 | 377 | 189 | 7 | 111 | 483 | 1 | 342 | 3.82e-83 | 265 |
| MS.gene43452.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.29e-82 | 270 |
| MS.gene43452.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.29e-82 | 270 |
| MS.gene43452.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.29e-82 | 270 |
| MS.gene43452.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.29e-82 | 270 |
| MS.gene43452.t1 | AT5G10250 | 29.094 | 574 | 338 | 9 | 5 | 540 | 29 | 571 | 8.33e-82 | 270 |
| MS.gene43452.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 66 | 489 | 1.21e-81 | 269 |
| MS.gene43452.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 76 | 499 | 1.75e-81 | 269 |
| MS.gene43452.t1 | AT5G10250 | 29.412 | 561 | 332 | 9 | 8 | 540 | 32 | 556 | 2.75e-80 | 265 |
| MS.gene43452.t1 | AT2G30520 | 32.112 | 464 | 287 | 6 | 21 | 475 | 25 | 469 | 3.21e-80 | 265 |
| MS.gene43452.t1 | AT3G44820 | 31.800 | 500 | 300 | 9 | 13 | 473 | 10 | 507 | 2.82e-76 | 255 |
| MS.gene43452.t1 | AT3G50840 | 34.755 | 469 | 278 | 9 | 16 | 473 | 6 | 457 | 1.93e-75 | 251 |
| MS.gene43452.t1 | AT1G03010 | 31.408 | 554 | 321 | 10 | 24 | 532 | 7 | 546 | 2.32e-75 | 252 |
| MS.gene43452.t1 | AT1G03010 | 31.217 | 567 | 329 | 11 | 11 | 532 | 22 | 572 | 3.61e-75 | 252 |
| MS.gene43452.t1 | AT1G03010 | 31.408 | 554 | 321 | 10 | 24 | 532 | 34 | 573 | 3.84e-75 | 252 |
| MS.gene43452.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 5.61e-74 | 246 |
| MS.gene43452.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 5.61e-74 | 246 |
| MS.gene43452.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.18e-72 | 241 |
| MS.gene43452.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.18e-72 | 241 |
| MS.gene43452.t1 | AT3G08660 | 31.078 | 473 | 286 | 11 | 10 | 473 | 23 | 464 | 7.41e-70 | 236 |
| MS.gene43452.t1 | AT3G08570 | 30.818 | 477 | 304 | 10 | 13 | 473 | 22 | 488 | 1.63e-68 | 234 |
| MS.gene43452.t1 | AT2G47860 | 29.938 | 481 | 289 | 9 | 23 | 475 | 34 | 494 | 2.73e-65 | 226 |
| MS.gene43452.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 3.09e-65 | 223 |
| MS.gene43452.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 3.09e-65 | 223 |
| MS.gene43452.t1 | AT5G66560 | 31.049 | 467 | 256 | 8 | 23 | 425 | 16 | 480 | 1.09e-62 | 215 |
| MS.gene43452.t1 | AT3G08660 | 31.163 | 430 | 261 | 10 | 53 | 473 | 1 | 404 | 1.35e-61 | 213 |
| MS.gene43452.t1 | AT2G47860 | 28.571 | 504 | 289 | 10 | 23 | 475 | 34 | 517 | 2.35e-60 | 213 |
| MS.gene43452.t1 | AT5G03250 | 29.923 | 391 | 243 | 6 | 111 | 473 | 1 | 388 | 1.73e-54 | 192 |
| MS.gene43452.t1 | AT3G08660 | 29.812 | 426 | 259 | 11 | 10 | 426 | 23 | 417 | 3.81e-52 | 185 |
| MS.gene43452.t1 | AT1G52770 | 36.860 | 293 | 164 | 6 | 201 | 483 | 28 | 309 | 5.49e-49 | 177 |
| MS.gene43452.t1 | AT2G47860 | 29.002 | 431 | 258 | 9 | 23 | 425 | 34 | 444 | 4.75e-48 | 174 |
| MS.gene43452.t1 | AT2G47860 | 27.533 | 454 | 258 | 10 | 23 | 425 | 34 | 467 | 2.13e-43 | 162 |
| MS.gene43452.t1 | AT3G03510 | 30.424 | 401 | 223 | 12 | 80 | 473 | 8 | 359 | 4.26e-43 | 161 |
| MS.gene43452.t1 | AT3G15570 | 34.643 | 280 | 162 | 5 | 209 | 475 | 37 | 308 | 1.54e-42 | 159 |
| MS.gene43452.t1 | AT5G48130 | 27.133 | 457 | 296 | 12 | 26 | 473 | 39 | 467 | 4.24e-42 | 161 |
| MS.gene43452.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 3.87e-41 | 157 |
| MS.gene43452.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 3.87e-41 | 157 |
| MS.gene43452.t1 | AT3G19850 | 27.714 | 433 | 265 | 9 | 68 | 473 | 52 | 463 | 9.77e-40 | 153 |
| MS.gene43452.t1 | AT1G50280 | 27.626 | 438 | 278 | 11 | 67 | 483 | 17 | 436 | 1.36e-39 | 152 |
| MS.gene43452.t1 | AT1G50280 | 27.830 | 424 | 272 | 10 | 67 | 469 | 50 | 460 | 1.74e-39 | 152 |
| MS.gene43452.t1 | AT5G17580 | 27.253 | 466 | 301 | 12 | 21 | 473 | 15 | 455 | 3.51e-38 | 149 |
| MS.gene43452.t1 | AT5G17580 | 27.312 | 465 | 300 | 12 | 22 | 473 | 1 | 440 | 9.69e-38 | 147 |
| MS.gene43452.t1 | AT3G22104 | 28.194 | 454 | 262 | 14 | 28 | 458 | 6 | 418 | 1.77e-33 | 134 |
| MS.gene43452.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 1.99e-24 | 106 |
| MS.gene43452.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 1.99e-24 | 106 |
| MS.gene43452.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 1.99e-24 | 106 |
Find 104 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTCCACCACAGCTTAT+TGG | 0.257853 | 8.4:-527826 | MS.gene43452:CDS |
| TCTTTAGGACAAGAGTTTAA+TGG | 0.264714 | 8.4:-526297 | MS.gene43452:CDS |
| AAACAACATGAGATAATTCT+AGG | 0.287866 | 8.4:-526363 | MS.gene43452:CDS |
| CAATAGAGTCATTCATTCTA+AGG | 0.299238 | 8.4:+528263 | None:intergenic |
| GTCCTAAAGATTGTTTGCTT+TGG | 0.314234 | 8.4:+526310 | None:intergenic |
| TGGAAACTTTCTTGAAGCTT+TGG | 0.319994 | 8.4:-527456 | MS.gene43452:CDS |
| ATCAGAACATAGCATGAAAA+AGG | 0.330713 | 8.4:-526043 | MS.gene43452:CDS |
| CTTTGTAGGAGTCCACATTT+TGG | 0.332378 | 8.4:+528445 | None:intergenic |
| ACGGCATGGCCACGTACTTC+TGG | 0.332882 | 8.4:+526480 | None:intergenic |
| AGCTGCACTACAGTTCTTAA+TGG | 0.333339 | 8.4:+526441 | None:intergenic |
| CTATGCATGCCGGTGGTTAC+CGG | 0.333749 | 8.4:-527788 | MS.gene43452:CDS |
| ATTGAGAAGGGAAACTTTGT+AGG | 0.333990 | 8.4:-528244 | MS.gene43452:CDS |
| ACTCTATATCATAATAATTC+TGG | 0.336966 | 8.4:+527494 | None:intergenic |
| TGATAAAGACAGAACTAATA+AGG | 0.345533 | 8.4:-527585 | MS.gene43452:CDS |
| TCCTCAGTCCACCAATCCTT+TGG | 0.347878 | 8.4:+527910 | None:intergenic |
| TTATTAAGCTTCGTGATTCC+CGG | 0.358494 | 8.4:+527769 | None:intergenic |
| AATCATAGCAAAGCCTTTGT+AGG | 0.376663 | 8.4:+528431 | None:intergenic |
| TTGCTATGATTCTAGTGATT+CGG | 0.393279 | 8.4:-528419 | MS.gene43452:CDS |
| TGTTCAGTGTAGAAAGTATC+TGG | 0.401715 | 8.4:+528726 | None:intergenic |
| ATTCATGCATTCTTGAAAGT+TGG | 0.405825 | 8.4:-528201 | MS.gene43452:CDS |
| TTGAGATCAATCAGAAATGT+AGG | 0.406103 | 8.4:-527394 | MS.gene43452:CDS |
| AGCCAAAGCAAACAATCTTT+AGG | 0.407220 | 8.4:-526312 | MS.gene43452:CDS |
| GGCAATTGACATCTATCTTA+AGG | 0.413017 | 8.4:-527248 | MS.gene43452:intron |
| TCTAGCAACCACTTGAAGAT+AGG | 0.417159 | 8.4:+527357 | None:intergenic |
| TTATCTGCCTTACTCAGATC+AGG | 0.424226 | 8.4:+526543 | None:intergenic |
| TGAACAGGAGAAAGGGTCTA+TGG | 0.435017 | 8.4:-526409 | MS.gene43452:CDS |
| CTCTACTTTGAACAGGAGAA+AGG | 0.436340 | 8.4:-526417 | MS.gene43452:CDS |
| GCAGCTTCTCTACTTTGAAC+AGG | 0.439971 | 8.4:-526424 | MS.gene43452:CDS |
| AAAATGAAGTTCATGAAACT+TGG | 0.444516 | 8.4:-528756 | MS.gene43452:CDS |
| AATTCTCACACCCTCGCAAC+AGG | 0.451795 | 8.4:-528080 | MS.gene43452:intron |
| TAGCTGTTATCCACAGCACC+AGG | 0.458542 | 8.4:+527421 | None:intergenic |
| GACAGAGGGTCTGTTTCAGT+TGG | 0.461892 | 8.4:-527658 | MS.gene43452:CDS |
| GAGAGCAAGCTTACAGTTTG+AGG | 0.464638 | 8.4:-527563 | MS.gene43452:CDS |
| CCTCAGTCCACCAATCCTTT+GGG | 0.464853 | 8.4:+527911 | None:intergenic |
| CAAAATGTGGACTCCTACAA+AGG | 0.468663 | 8.4:-528444 | MS.gene43452:CDS |
| GTAATGTAGCAGTAGTTTGA+AGG | 0.478481 | 8.4:+528161 | None:intergenic |
| TGCAAATTTAGCATTAGACT+TGG | 0.484426 | 8.4:-526205 | MS.gene43452:CDS |
| GTCATTCATTCTAAGGAACT+TGG | 0.484520 | 8.4:+528270 | None:intergenic |
| AGAGTTAGTTCTAGCAGTGT+TGG | 0.487244 | 8.4:-527476 | MS.gene43452:CDS |
| TTGAAGAGACAGAGTCAGAA+AGG | 0.488396 | 8.4:-526152 | MS.gene43452:CDS |
| CCAGAGTGGTCTGAGAATCT+TGG | 0.488838 | 8.4:-528139 | MS.gene43452:CDS |
| ATGATTCTGTGCAGGTGAAA+TGG | 0.489710 | 8.4:-527984 | MS.gene43452:intron |
| TATGCATGCCGGTGGTTACC+GGG | 0.501159 | 8.4:-527787 | MS.gene43452:CDS |
| ACCATTCTGTCCCAAAGGAT+TGG | 0.504137 | 8.4:-527921 | MS.gene43452:CDS |
| TTTGCCCTTCTTCCAAAATG+TGG | 0.505993 | 8.4:-528457 | MS.gene43452:CDS |
| ACGAAGCTTAATAAAAGCTC+AGG | 0.506205 | 8.4:-527760 | MS.gene43452:CDS |
| AATTCTTGAAAGTAGAGAAA+AGG | 0.506277 | 8.4:-526253 | MS.gene43452:CDS |
| GTAGTTTGAAGGGTTGCAAT+GGG | 0.507662 | 8.4:+528172 | None:intergenic |
| ACCAATCCTTTGGGACAGAA+TGG | 0.517753 | 8.4:+527920 | None:intergenic |
| TCTACTTTGAACAGGAGAAA+GGG | 0.518033 | 8.4:-526416 | MS.gene43452:CDS |
| TGTGTAACCGGGTCTGGTGT+AGG | 0.520651 | 8.4:+527954 | None:intergenic |
| GAAACAGACCCTCTGTCTGC+AGG | 0.525704 | 8.4:+527664 | None:intergenic |
| TTCTGTCTTTATCACTGATG+AGG | 0.527594 | 8.4:+527594 | None:intergenic |
| TCACCACAGACATAAAAGAT+TGG | 0.529296 | 8.4:-526229 | MS.gene43452:CDS |
| TCAAAAGCATCTTCCCCTCC+AGG | 0.529984 | 8.4:+528367 | None:intergenic |
| AATGAATGACTCTATTGAGA+AGG | 0.532339 | 8.4:-528257 | MS.gene43452:CDS |
| ATGAATGACTCTATTGAGAA+GGG | 0.537138 | 8.4:-528256 | MS.gene43452:CDS |
| TGGTCTACTCTTGCAATGCT+CGG | 0.537710 | 8.4:+527286 | None:intergenic |
| TGAAGAGACAGAGTCAGAAA+GGG | 0.541907 | 8.4:-526151 | MS.gene43452:CDS |
| ATTCTGTCCCAAAGGATTGG+TGG | 0.547591 | 8.4:-527918 | MS.gene43452:CDS |
| GGTGCATCCTGATCTGAGTA+AGG | 0.550735 | 8.4:-526550 | MS.gene43452:CDS |
| ATGCATTCTTGAAAGTTGGA+AGG | 0.551432 | 8.4:-528197 | MS.gene43452:CDS |
| TTGTTTCTGACCTGTTGCGA+GGG | 0.556069 | 8.4:+528070 | None:intergenic |
| AAATGAAGTTCATGAAACTT+GGG | 0.559279 | 8.4:-528755 | MS.gene43452:CDS |
| AGTAGTTTGAAGGGTTGCAA+TGG | 0.564457 | 8.4:+528171 | None:intergenic |
| TCTACTTTCAAGAATTTGAG+TGG | 0.566408 | 8.4:+526260 | None:intergenic |
| TCGTGATTCCCGGTAACCAC+CGG | 0.567730 | 8.4:+527779 | None:intergenic |
| GATTTGTATTACAAAGTCTG+AGG | 0.575235 | 8.4:+528595 | None:intergenic |
| ATAATAATTCTGGTCTGAAG+AGG | 0.580103 | 8.4:+527504 | None:intergenic |
| TCCTTCACCTACACCAGACC+CGG | 0.580358 | 8.4:-527961 | MS.gene43452:CDS |
| AAGAATGTCCCCTGGTGCTG+TGG | 0.580374 | 8.4:-527431 | MS.gene43452:CDS |
| GCTTCACCAATAAGCTGTGG+TGG | 0.583607 | 8.4:+527820 | None:intergenic |
| ACAGAGTCAGAAAGGGTGAG+AGG | 0.589004 | 8.4:-526144 | MS.gene43452:CDS |
| ACCGGGTCTGGTGTAGGTGA+AGG | 0.590318 | 8.4:+527960 | None:intergenic |
| TAATGTAGCAGTAGTTTGAA+GGG | 0.590928 | 8.4:+528162 | None:intergenic |
| AAGTAGTTCGAGCTACAAGT+TGG | 0.595940 | 8.4:-526109 | MS.gene43452:CDS |
| ATTTGTATTACAAAGTCTGA+GGG | 0.596786 | 8.4:+528596 | None:intergenic |
| GCTTCATGATATACCTGGAG+GGG | 0.598800 | 8.4:-528380 | MS.gene43452:CDS |
| CCAAGATTCTCAGACCACTC+TGG | 0.602252 | 8.4:+528139 | None:intergenic |
| AGCAAGCTTACAGTTTGAGG+AGG | 0.602564 | 8.4:-527560 | MS.gene43452:CDS |
| GTGGAGCTTCATGATATACC+TGG | 0.604285 | 8.4:-528385 | MS.gene43452:CDS |
| TCTACACTGAACAAGCTACC+AGG | 0.607293 | 8.4:-528716 | MS.gene43452:intron |
| CATAGACTCCTATCTTCAAG+TGG | 0.609809 | 8.4:-527365 | MS.gene43452:CDS |
| TTTGTTTCTGACCTGTTGCG+AGG | 0.609870 | 8.4:+528069 | None:intergenic |
| AGCTTCATGATATACCTGGA+GGG | 0.613646 | 8.4:-528381 | MS.gene43452:CDS |
| CAGATAAGAAGAGACTGTGT+GGG | 0.617913 | 8.4:-526527 | MS.gene43452:CDS |
| CTTTGGAAAAGAATGTCCCC+TGG | 0.619063 | 8.4:-527439 | MS.gene43452:CDS |
| CTTTGCATGTCTATGCATGC+CGG | 0.619328 | 8.4:-527798 | MS.gene43452:CDS |
| GCATGATTCCTGCAGACAGA+GGG | 0.630954 | 8.4:-527672 | MS.gene43452:CDS |
| ACAGCACCATTCTGTCCCAA+AGG | 0.631036 | 8.4:-527926 | MS.gene43452:CDS |
| AGACCACAACGATCTATACA+AGG | 0.631528 | 8.4:-527269 | MS.gene43452:CDS |
| TTGCCTTGTATAGATCGTTG+TGG | 0.649985 | 8.4:+527266 | None:intergenic |
| TGCATGTCTATGCATGCCGG+TGG | 0.650418 | 8.4:-527795 | MS.gene43452:CDS |
| AGTTCATGAAACTTGGGACA+AGG | 0.654108 | 8.4:-528749 | MS.gene43452:CDS |
| GCAGATAAGAAGAGACTGTG+TGG | 0.654770 | 8.4:-526528 | MS.gene43452:CDS |
| AGCATGATTCCTGCAGACAG+AGG | 0.655585 | 8.4:-527673 | MS.gene43452:CDS |
| GCTGTTATCCACAGCACCAG+GGG | 0.656030 | 8.4:+527423 | None:intergenic |
| AGCTGTTATCCACAGCACCA+GGG | 0.676561 | 8.4:+527422 | None:intergenic |
| GAGCTTCATGATATACCTGG+AGG | 0.685850 | 8.4:-528382 | MS.gene43452:CDS |
| CCCAAAGGATTGGTGGACTG+AGG | 0.687423 | 8.4:-527911 | MS.gene43452:CDS |
| AAAGCTTCACCAATAAGCTG+TGG | 0.694004 | 8.4:+527817 | None:intergenic |
| TGTTACTTATCTGCTACACA+AGG | 0.712317 | 8.4:-528567 | MS.gene43452:intron |
| CTACTGCTACATTACCAGAG+TGG | 0.738581 | 8.4:-528153 | MS.gene43452:CDS |
| AAACTGACACCAGAAGTACG+TGG | 0.774606 | 8.4:-526489 | MS.gene43452:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAATTTAAAGTAAATAAA+GGG | + | chr8.4:527635-527654 | None:intergenic | 10.0% |
| !!! | TTGTAATTTAAAGTAAATAA+AGG | + | chr8.4:527636-527655 | None:intergenic | 10.0% |
| !!! | GTAATTTAAAGTAAATAAAG+GGG | + | chr8.4:527634-527653 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTAAATAAAGG+GGG | + | chr8.4:527633-527652 | None:intergenic | 15.0% |
| !! | ACTCTATATCATAATAATTC+TGG | + | chr8.4:527288-527307 | None:intergenic | 20.0% |
| !! | ATCCTAAAAAAATCATAAGA+AGG | - | chr8.4:528702-528721 | MS.gene43452:intron | 20.0% |
| !! | TCCTAAAAAAATCATAAGAA+GGG | - | chr8.4:528703-528722 | MS.gene43452:intron | 20.0% |
| !!! | AGCTATTTTCATAAGTTATT+CGG | + | chr8.4:528039-528058 | None:intergenic | 20.0% |
| !!! | TAAGATATTTCTATAACACA+AGG | + | chr8.4:528096-528115 | None:intergenic | 20.0% |
| ! | AAACAACATGAGATAATTCT+AGG | - | chr8.4:528416-528435 | MS.gene43452:CDS | 25.0% |
| ! | AAGGAAAAATCATAAAAGGT+AGG | + | chr8.4:527571-527590 | None:intergenic | 25.0% |
| ! | AAGTGGAAAACTTTGATTAT+TGG | - | chr8.4:528175-528194 | MS.gene43452:CDS | 25.0% |
| ! | AATGAAACTAAACACTTGTT+TGG | - | chr8.4:527892-527911 | MS.gene43452:CDS | 25.0% |
| ! | AATTCTTGAAAGTAGAGAAA+AGG | - | chr8.4:528526-528545 | MS.gene43452:intron | 25.0% |
| ! | AGGAAAAATCATAAAAGGTA+GGG | + | chr8.4:527570-527589 | None:intergenic | 25.0% |
| ! | ATTTGTATTACAAAGTCTGA+GGG | + | chr8.4:526186-526205 | None:intergenic | 25.0% |
| ! | GAAAAAAAGATAGCAATAAG+AGG | - | chr8.4:528596-528615 | MS.gene43452:CDS | 25.0% |
| ! | GTTGAAGGAAAAATCATAAA+AGG | + | chr8.4:527575-527594 | None:intergenic | 25.0% |
| ! | TCTATATTATTAGAGTCTCA+AGG | + | chr8.4:527788-527807 | None:intergenic | 25.0% |
| ! | TGATAAAGACAGAACTAATA+AGG | - | chr8.4:527194-527213 | MS.gene43452:intron | 25.0% |
| ! | TTAAAGTTGAATGCATAAAC+AGG | - | chr8.4:528208-528227 | MS.gene43452:CDS | 25.0% |
| !! | ACAAGTGTTTAGTTTCATTT+AGG | + | chr8.4:527891-527910 | None:intergenic | 25.0% |
| !! | CAAGTGTTTAGTTTCATTTA+GGG | + | chr8.4:527890-527909 | None:intergenic | 25.0% |
| !!! | AATACATGTTAGTTTGTGAA+AGG | + | chr8.4:526131-526150 | None:intergenic | 25.0% |
| !!! | GCTATTTTCATAAGTTATTC+GGG | + | chr8.4:528038-528057 | None:intergenic | 25.0% |
| !!! | TTTGGTTTGCTAAAAAACAT+GGG | + | chr8.4:527863-527882 | None:intergenic | 25.0% |
| AATGAATGACTCTATTGAGA+AGG | - | chr8.4:526522-526541 | MS.gene43452:CDS | 30.0% | |
| AATTGACATCTATCTTAAGG+TGG | - | chr8.4:527534-527553 | MS.gene43452:CDS | 30.0% | |
| ACATGTATTCTCATAAATGC+AGG | - | chr8.4:526142-526161 | MS.gene43452:CDS | 30.0% | |
| AGACTATTCGAGAAAACTTA+CGG | - | chr8.4:527956-527975 | MS.gene43452:CDS | 30.0% | |
| ATAATAATTCTGGTCTGAAG+AGG | + | chr8.4:527278-527297 | None:intergenic | 30.0% | |
| ATCAGAACATAGCATGAAAA+AGG | - | chr8.4:528736-528755 | MS.gene43452:CDS | 30.0% | |
| ATGAATGACTCTATTGAGAA+GGG | - | chr8.4:526523-526542 | MS.gene43452:CDS | 30.0% | |
| ATTCATGCATTCTTGAAAGT+TGG | - | chr8.4:526578-526597 | MS.gene43452:intron | 30.0% | |
| CAACCCATAATCCTATAATT+TGG | - | chr8.4:527827-527846 | MS.gene43452:CDS | 30.0% | |
| CAATAGAGTCATTCATTCTA+AGG | + | chr8.4:526519-526538 | None:intergenic | 30.0% | |
| GATTTGTATTACAAAGTCTG+AGG | + | chr8.4:526187-526206 | None:intergenic | 30.0% | |
| TAATGTAGCAGTAGTTTGAA+GGG | + | chr8.4:526620-526639 | None:intergenic | 30.0% | |
| TATAAATGATGATTCTGTGC+AGG | - | chr8.4:526787-526806 | MS.gene43452:intron | 30.0% | |
| TCTACTTTCAAGAATTTGAG+TGG | + | chr8.4:528522-528541 | None:intergenic | 30.0% | |
| TGCAAATTTAGCATTAGACT+TGG | - | chr8.4:528574-528593 | MS.gene43452:CDS | 30.0% | |
| TGGCCAAATTATAGGATTAT+GGG | + | chr8.4:527833-527852 | None:intergenic | 30.0% | |
| TTGAGATCAATCAGAAATGT+AGG | - | chr8.4:527385-527404 | MS.gene43452:CDS | 30.0% | |
| TTGCTATGATTCTAGTGATT+CGG | - | chr8.4:526360-526379 | MS.gene43452:CDS | 30.0% | |
| ! | ATCTTGACATAGATCTTTTC+AGG | - | chr8.4:526900-526919 | MS.gene43452:intron | 30.0% |
| !! | AGGATTTTGAAGGATAAAGA+AGG | + | chr8.4:527258-527277 | None:intergenic | 30.0% |
| !! | GTTTGGTTTGCTAAAAAACA+TGG | + | chr8.4:527864-527883 | None:intergenic | 30.0% |
| !! | TCTTTAGGACAAGAGTTTAA+TGG | - | chr8.4:528482-528501 | MS.gene43452:intron | 30.0% |
| !!! | GCCCTTCTTATGATTTTTTT+AGG | + | chr8.4:528707-528726 | None:intergenic | 30.0% |
| !!! | TCTTTTCAGGTGCATAATAA+TGG | - | chr8.4:526913-526932 | MS.gene43452:intron | 30.0% |
| AATCAGGATAGGCAATTAAG+TGG | - | chr8.4:528158-528177 | MS.gene43452:CDS | 35.0% | |
| AATCATAGCAAAGCCTTTGT+AGG | + | chr8.4:526351-526370 | None:intergenic | 35.0% | |
| ACGAAGCTTAATAAAAGCTC+AGG | - | chr8.4:527019-527038 | MS.gene43452:intron | 35.0% | |
| AGCCAAAGCAAACAATCTTT+AGG | - | chr8.4:528467-528486 | MS.gene43452:intron | 35.0% | |
| ATGCATTCTTGAAAGTTGGA+AGG | - | chr8.4:526582-526601 | MS.gene43452:intron | 35.0% | |
| ATTGAGAAGGGAAACTTTGT+AGG | - | chr8.4:526535-526554 | MS.gene43452:CDS | 35.0% | |
| CTGGCCAAATTATAGGATTA+TGG | + | chr8.4:527834-527853 | None:intergenic | 35.0% | |
| GGCAATTGACATCTATCTTA+AGG | - | chr8.4:527531-527550 | MS.gene43452:CDS | 35.0% | |
| GTAATGTAGCAGTAGTTTGA+AGG | + | chr8.4:526621-526640 | None:intergenic | 35.0% | |
| GTCCTAAAGATTGTTTGCTT+TGG | + | chr8.4:528472-528491 | None:intergenic | 35.0% | |
| TCACCACAGACATAAAAGAT+TGG | - | chr8.4:528550-528569 | MS.gene43452:intron | 35.0% | |
| TCTACTTTGAACAGGAGAAA+GGG | - | chr8.4:528363-528382 | MS.gene43452:CDS | 35.0% | |
| TGGAAACTTTCTTGAAGCTT+TGG | - | chr8.4:527323-527342 | MS.gene43452:CDS | 35.0% | |
| TTAAGGACTTAGAACTCAAG+TGG | - | chr8.4:526237-526256 | MS.gene43452:CDS | 35.0% | |
| TTAATTGCCTATCCTGATTC+TGG | + | chr8.4:528157-528176 | None:intergenic | 35.0% | |
| TTATTAAGCTTCGTGATTCC+CGG | + | chr8.4:527013-527032 | None:intergenic | 35.0% | |
| TTCTGTCTTTATCACTGATG+AGG | + | chr8.4:527188-527207 | None:intergenic | 35.0% | |
| TTTGCTAAAAAACATGGGAC+TGG | + | chr8.4:527858-527877 | None:intergenic | 35.0% | |
| ! | AGTTTCATTTAGGGTGTGTT+TGG | + | chr8.4:527881-527900 | None:intergenic | 35.0% |
| ! | ATCTGCTACACAAGGTATTA+AGG | - | chr8.4:526220-526239 | MS.gene43452:CDS | 35.0% |
| ! | CATCCAATCTTTTATGTCTG+TGG | + | chr8.4:528556-528575 | None:intergenic | 35.0% |
| ! | GTCATTCATTCTAAGGAACT+TGG | + | chr8.4:526512-526531 | None:intergenic | 35.0% |
| ! | TGTTACTTATCTGCTACACA+AGG | - | chr8.4:526212-526231 | MS.gene43452:CDS | 35.0% |
| !! | TGTTCAGTGTAGAAAGTATC+TGG | + | chr8.4:526056-526075 | None:intergenic | 35.0% |
| !!! | CTCTGTGCTAAGTTTTGTTA+TGG | - | chr8.4:526436-526455 | MS.gene43452:CDS | 35.0% |
| !!! | GTGCTGTTTTTTTGTGTAAC+CGG | + | chr8.4:526840-526859 | None:intergenic | 35.0% |
| !!! | TGCTGTTTTTTTGTGTAACC+GGG | + | chr8.4:526839-526858 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGCAGTTTGTGAC+TGG | + | chr8.4:528402-528421 | None:intergenic | 35.0% |
| AAAGCTTCACCAATAAGCTG+TGG | + | chr8.4:526965-526984 | None:intergenic | 40.0% | |
| AACAACACCAGAATCAGGAT+AGG | - | chr8.4:528147-528166 | MS.gene43452:CDS | 40.0% | |
| AAGTAGTTCGAGCTACAAGT+TGG | - | chr8.4:528670-528689 | MS.gene43452:intron | 40.0% | |
| AAGTTATTCGGGAGAGCTTA+TGG | + | chr8.4:528027-528046 | None:intergenic | 40.0% | |
| ACCAATCTGACTCTAGTTGA+AGG | + | chr8.4:527590-527609 | None:intergenic | 40.0% | |
| AGACCACAACGATCTATACA+AGG | - | chr8.4:527510-527529 | MS.gene43452:CDS | 40.0% | |
| AGCTGCACTACAGTTCTTAA+TGG | + | chr8.4:528341-528360 | None:intergenic | 40.0% | |
| AGCTTCATGATATACCTGGA+GGG | - | chr8.4:526398-526417 | MS.gene43452:CDS | 40.0% | |
| AGTAGTTTGAAGGGTTGCAA+TGG | + | chr8.4:526611-526630 | None:intergenic | 40.0% | |
| AGTTCATGAAACTTGGGACA+AGG | - | chr8.4:526030-526049 | MS.gene43452:CDS | 40.0% | |
| ATAGTCTCTTGCTTGAATGC+TGG | - | chr8.4:527740-527759 | MS.gene43452:CDS | 40.0% | |
| ATCAGAACAACACCAGAATC+AGG | - | chr8.4:528142-528161 | MS.gene43452:CDS | 40.0% | |
| ATGATTCTGTGCAGGTGAAA+TGG | - | chr8.4:526795-526814 | MS.gene43452:intron | 40.0% | |
| CAAAATGTGGACTCCTACAA+AGG | - | chr8.4:526335-526354 | MS.gene43452:CDS | 40.0% | |
| CAGATAAGAAGAGACTGTGT+GGG | - | chr8.4:528252-528271 | MS.gene43452:CDS | 40.0% | |
| CATAGACTCCTATCTTCAAG+TGG | - | chr8.4:527414-527433 | MS.gene43452:CDS | 40.0% | |
| CTACGCAAATCTTTGACAAC+AGG | + | chr8.4:527684-527703 | None:intergenic | 40.0% | |
| CTCTACTTTGAACAGGAGAA+AGG | - | chr8.4:528362-528381 | MS.gene43452:CDS | 40.0% | |
| CTGTTGTCAAAGATTTGCGT+AGG | - | chr8.4:527682-527701 | MS.gene43452:CDS | 40.0% | |
| GTAGTTTGAAGGGTTGCAAT+GGG | + | chr8.4:526610-526629 | None:intergenic | 40.0% | |
| TAAAAAACATGGGACTGGAC+TGG | + | chr8.4:527853-527872 | None:intergenic | 40.0% | |
| TCCTTCAACTAGAGTCAGAT+TGG | - | chr8.4:527586-527605 | MS.gene43452:CDS | 40.0% | |
| TCTAGCAACCACTTGAAGAT+AGG | + | chr8.4:527425-527444 | None:intergenic | 40.0% | |
| TGAAGAGACAGAGTCAGAAA+GGG | - | chr8.4:528628-528647 | MS.gene43452:intron | 40.0% | |
| TTATCTGCCTTACTCAGATC+AGG | + | chr8.4:528239-528258 | None:intergenic | 40.0% | |
| TTGAAGAGACAGAGTCAGAA+AGG | - | chr8.4:528627-528646 | MS.gene43452:intron | 40.0% | |
| TTGCCTTGTATAGATCGTTG+TGG | + | chr8.4:527516-527535 | None:intergenic | 40.0% | |
| TTTGCCCTTCTTCCAAAATG+TGG | - | chr8.4:526322-526341 | MS.gene43452:CDS | 40.0% | |
| ! | CTTTGTAGGAGTCCACATTT+TGG | + | chr8.4:526337-526356 | None:intergenic | 40.0% |
| ! | TGGTCTGAAGAGGATTTTGA+AGG | + | chr8.4:527268-527287 | None:intergenic | 40.0% |
| !! | AGAGTTAGTTCTAGCAGTGT+TGG | - | chr8.4:527303-527322 | MS.gene43452:CDS | 40.0% |
| !! | GAGTCCACATTTTGGAAGAA+GGG | + | chr8.4:526329-526348 | None:intergenic | 40.0% |
| !! | GTACTTCTGGTGTCAGTTTT+TGG | + | chr8.4:528289-528308 | None:intergenic | 40.0% |
| !! | TGATTCGGAGAGTTTTACTG+TGG | - | chr8.4:526375-526394 | MS.gene43452:CDS | 40.0% |
| !!! | TTTTTTTGTGTAACCGGGTC+TGG | + | chr8.4:526834-526853 | None:intergenic | 40.0% |
| ACCATTCTGTCCCAAAGGAT+TGG | - | chr8.4:526858-526877 | MS.gene43452:intron | 45.0% | |
| AGCAAGCTTACAGTTTGAGG+AGG | - | chr8.4:527219-527238 | MS.gene43452:intron | 45.0% | |
| ATTCTGTCCCAAAGGATTGG+TGG | - | chr8.4:526861-526880 | MS.gene43452:intron | 45.0% | |
| CTACTGCTACATTACCAGAG+TGG | - | chr8.4:526626-526645 | MS.gene43452:intron | 45.0% | |
| CTTTGCATGTCTATGCATGC+CGG | - | chr8.4:526981-527000 | MS.gene43452:intron | 45.0% | |
| GAGAGCAAGCTTACAGTTTG+AGG | - | chr8.4:527216-527235 | MS.gene43452:intron | 45.0% | |
| GAGCTTCATGATATACCTGG+AGG | - | chr8.4:526397-526416 | MS.gene43452:CDS | 45.0% | |
| GCAGATAAGAAGAGACTGTG+TGG | - | chr8.4:528251-528270 | MS.gene43452:CDS | 45.0% | |
| GCAGCTTCTCTACTTTGAAC+AGG | - | chr8.4:528355-528374 | MS.gene43452:CDS | 45.0% | |
| GCTTCATGATATACCTGGAG+GGG | - | chr8.4:526399-526418 | MS.gene43452:CDS | 45.0% | |
| GTGGAGCTTCATGATATACC+TGG | - | chr8.4:526394-526413 | MS.gene43452:CDS | 45.0% | |
| TCTACACTGAACAAGCTACC+AGG | - | chr8.4:526063-526082 | MS.gene43452:CDS | 45.0% | |
| TGAACAGGAGAAAGGGTCTA+TGG | - | chr8.4:528370-528389 | MS.gene43452:CDS | 45.0% | |
| TGGTCTACTCTTGCAATGCT+CGG | + | chr8.4:527496-527515 | None:intergenic | 45.0% | |
| ! | AAACTGACACCAGAAGTACG+TGG | - | chr8.4:528290-528309 | MS.gene43452:CDS | 45.0% |
| ! | CTTTGGAAAAGAATGTCCCC+TGG | - | chr8.4:527340-527359 | MS.gene43452:CDS | 45.0% |
| !! | ACCAATCCTTTGGGACAGAA+TGG | + | chr8.4:526862-526881 | None:intergenic | 45.0% |
| !! | GACTGGACTGGCCAAATTAT+AGG | + | chr8.4:527841-527860 | None:intergenic | 45.0% |
| !! | GGAGTCCACATTTTGGAAGA+AGG | + | chr8.4:526330-526349 | None:intergenic | 45.0% |
| !! | TGGCAGAAGCTCGTTTTTGA+CGG | + | chr8.4:528321-528340 | None:intergenic | 45.0% |
| !! | TTGTTTCTGACCTGTTGCGA+GGG | + | chr8.4:526712-526731 | None:intergenic | 45.0% |
| !! | TTTGTTTCTGACCTGTTGCG+AGG | + | chr8.4:526713-526732 | None:intergenic | 45.0% |
| !!! | AAACTAAAATAAAAATATTT+TGG | + | chr8.4:526270-526289 | None:intergenic | 5.0% |
| AATTCTCACACCCTCGCAAC+AGG | - | chr8.4:526699-526718 | MS.gene43452:intron | 50.0% | |
| ACAGAGTCAGAAAGGGTGAG+AGG | - | chr8.4:528635-528654 | MS.gene43452:intron | 50.0% | |
| ACAGCACCATTCTGTCCCAA+AGG | - | chr8.4:526853-526872 | MS.gene43452:intron | 50.0% | |
| AGCATGATTCCTGCAGACAG+AGG | - | chr8.4:527106-527125 | MS.gene43452:intron | 50.0% | |
| AGCTGTTATCCACAGCACCA+GGG | + | chr8.4:527360-527379 | None:intergenic | 50.0% | |
| CCAAGATTCTCAGACCACTC+TGG | + | chr8.4:526643-526662 | None:intergenic | 50.0% | |
| CCAGAGTGGTCTGAGAATCT+TGG | - | chr8.4:526640-526659 | MS.gene43452:intron | 50.0% | |
| CCTCAGTCCACCAATCCTTT+GGG | + | chr8.4:526871-526890 | None:intergenic | 50.0% | |
| GACAGAGGGTCTGTTTCAGT+TGG | - | chr8.4:527121-527140 | MS.gene43452:intron | 50.0% | |
| GCATGATTCCTGCAGACAGA+GGG | - | chr8.4:527107-527126 | MS.gene43452:intron | 50.0% | |
| GCTTCACCAATAAGCTGTGG+TGG | + | chr8.4:526962-526981 | None:intergenic | 50.0% | |
| GGTGCATCCTGATCTGAGTA+AGG | - | chr8.4:528229-528248 | MS.gene43452:CDS | 50.0% | |
| GTGCTTCCACCACAGCTTAT+TGG | - | chr8.4:526953-526972 | MS.gene43452:intron | 50.0% | |
| TAGCTGTTATCCACAGCACC+AGG | + | chr8.4:527361-527380 | None:intergenic | 50.0% | |
| TCCTCAGTCCACCAATCCTT+TGG | + | chr8.4:526872-526891 | None:intergenic | 50.0% | |
| ! | TAAGCGCTGCTGTGAATACC+TGG | + | chr8.4:526084-526103 | None:intergenic | 50.0% |
| !! | GAAGCTCGTTTTTGACGGCA+TGG | + | chr8.4:528316-528335 | None:intergenic | 50.0% |
| !! | TCAAAAGCATCTTCCCCTCC+AGG | + | chr8.4:526415-526434 | None:intergenic | 50.0% |
| CTATGCATGCCGGTGGTTAC+CGG | - | chr8.4:526991-527010 | MS.gene43452:intron | 55.0% | |
| GAAACAGACCCTCTGTCTGC+AGG | + | chr8.4:527118-527137 | None:intergenic | 55.0% | |
| GCTGTTATCCACAGCACCAG+GGG | + | chr8.4:527359-527378 | None:intergenic | 55.0% | |
| TATGCATGCCGGTGGTTACC+GGG | - | chr8.4:526992-527011 | MS.gene43452:intron | 55.0% | |
| TCCTTCACCTACACCAGACC+CGG | - | chr8.4:526818-526837 | MS.gene43452:intron | 55.0% | |
| TCGTGATTCCCGGTAACCAC+CGG | + | chr8.4:527003-527022 | None:intergenic | 55.0% | |
| TGCATGTCTATGCATGCCGG+TGG | - | chr8.4:526984-527003 | MS.gene43452:intron | 55.0% | |
| TGTGTAACCGGGTCTGGTGT+AGG | + | chr8.4:526828-526847 | None:intergenic | 55.0% | |
| ! | AAGAATGTCCCCTGGTGCTG+TGG | - | chr8.4:527348-527367 | MS.gene43452:CDS | 55.0% |
| !! | CCCAAAGGATTGGTGGACTG+AGG | - | chr8.4:526868-526887 | MS.gene43452:intron | 55.0% |
| ACCGGGTCTGGTGTAGGTGA+AGG | + | chr8.4:526822-526841 | None:intergenic | 60.0% | |
| ACGGCATGGCCACGTACTTC+TGG | + | chr8.4:528302-528321 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 526026 | 528775 | 526026 | ID=MS.gene43452 |
| chr8.4 | mRNA | 526026 | 528775 | 526026 | ID=MS.gene43452.t1;Parent=MS.gene43452 |
| chr8.4 | exon | 528717 | 528775 | 528717 | ID=MS.gene43452.t1.exon1;Parent=MS.gene43452.t1 |
| chr8.4 | CDS | 528717 | 528775 | 528717 | ID=cds.MS.gene43452.t1;Parent=MS.gene43452.t1 |
| chr8.4 | exon | 528568 | 528637 | 528568 | ID=MS.gene43452.t1.exon2;Parent=MS.gene43452.t1 |
| chr8.4 | CDS | 528568 | 528637 | 528568 | ID=cds.MS.gene43452.t1;Parent=MS.gene43452.t1 |
| chr8.4 | exon | 528081 | 528479 | 528081 | ID=MS.gene43452.t1.exon3;Parent=MS.gene43452.t1 |
| chr8.4 | CDS | 528081 | 528479 | 528081 | ID=cds.MS.gene43452.t1;Parent=MS.gene43452.t1 |
| chr8.4 | exon | 527249 | 527992 | 527249 | ID=MS.gene43452.t1.exon4;Parent=MS.gene43452.t1 |
| chr8.4 | CDS | 527249 | 527992 | 527249 | ID=cds.MS.gene43452.t1;Parent=MS.gene43452.t1 |
| chr8.4 | exon | 526026 | 526571 | 526026 | ID=MS.gene43452.t1.exon5;Parent=MS.gene43452.t1 |
| chr8.4 | CDS | 526026 | 526571 | 526026 | ID=cds.MS.gene43452.t1;Parent=MS.gene43452.t1 |
| Gene Sequence |
| Protein sequence |
