Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44994.t1 | XP_003629527.2 | 96.4 | 337 | 1 | 3 | 41 | 367 | 247 | 582 | 6.00E-148 | 533.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44994.t1 | Q94KL5 | 78.7 | 202 | 28 | 3 | 177 | 367 | 233 | 430 | 5.8e-67 | 256.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44994.t1 | G7LFL6 | 96.4 | 337 | 1 | 3 | 41 | 367 | 247 | 582 | 4.3e-148 | 533.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene44994 | 0.833449 | 5.30E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene44994 | 0.803631 | 3.18E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene44994 | 0.815273 | 1.01E-51 | -1.69E-46 |
| MS.gene050499 | MS.gene44994 | 0.819409 | 1.18E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene44994 | 0.827752 | 1.31E-54 | -1.69E-46 |
| MS.gene055519 | MS.gene44994 | 0.803598 | 3.23E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene44994 | 0.827286 | 1.70E-54 | -1.69E-46 |
| MS.gene055911 | MS.gene44994 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene44994 | 0.808024 | 3.79E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene44994 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene44994 | 0.81941 | 1.18E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene44994 | 0.824985 | 6.00E-54 | -1.69E-46 |
| MS.gene059368 | MS.gene44994 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene059529 | MS.gene44994 | 0.805255 | 1.46E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene44994 | 0.835682 | 1.46E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene44994 | 0.818907 | 1.53E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene44994 | 0.805818 | 1.11E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene44994 | 0.844482 | 7.36E-59 | -1.69E-46 |
| MS.gene06097 | MS.gene44994 | 0.800494 | 1.40E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44994.t1 | MTR_8g078480 | 97.082 | 377 | 0 | 3 | 1 | 367 | 207 | 582 | 0.0 | 741 |
| MS.gene44994.t1 | MTR_5g018860 | 54.271 | 398 | 120 | 14 | 3 | 367 | 162 | 530 | 4.03e-110 | 338 |
| MS.gene44994.t1 | MTR_8g098815 | 44.978 | 229 | 91 | 5 | 148 | 367 | 173 | 375 | 1.47e-49 | 176 |
| MS.gene44994.t1 | MTR_1g023050 | 36.422 | 313 | 132 | 9 | 96 | 367 | 76 | 362 | 3.62e-40 | 150 |
| MS.gene44994.t1 | MTR_3g112300 | 39.614 | 207 | 100 | 6 | 175 | 367 | 156 | 351 | 3.13e-37 | 138 |
| MS.gene44994.t1 | MTR_3g112300 | 39.614 | 207 | 100 | 6 | 175 | 367 | 156 | 351 | 4.57e-37 | 138 |
| MS.gene44994.t1 | MTR_3g112300 | 39.614 | 207 | 100 | 6 | 175 | 367 | 156 | 351 | 1.80e-36 | 139 |
| MS.gene44994.t1 | MTR_3g112300 | 39.614 | 207 | 100 | 6 | 175 | 367 | 156 | 351 | 2.74e-36 | 139 |
| MS.gene44994.t1 | MTR_1g057790 | 41.206 | 199 | 104 | 2 | 178 | 367 | 158 | 352 | 3.18e-34 | 134 |
| MS.gene44994.t1 | MTR_4g051532 | 41.327 | 196 | 102 | 2 | 181 | 367 | 217 | 408 | 1.67e-29 | 120 |
| MS.gene44994.t1 | MTR_7g106320 | 43.655 | 197 | 96 | 3 | 182 | 367 | 172 | 364 | 2.82e-26 | 110 |
| MS.gene44994.t1 | MTR_4g019450 | 37.624 | 202 | 88 | 6 | 177 | 367 | 192 | 366 | 1.08e-23 | 102 |
| MS.gene44994.t1 | MTR_2g095050 | 30.189 | 212 | 119 | 5 | 177 | 368 | 244 | 446 | 7.58e-21 | 94.4 |
| MS.gene44994.t1 | MTR_7g065050 | 34.500 | 200 | 101 | 7 | 177 | 367 | 133 | 311 | 1.29e-19 | 90.5 |
| MS.gene44994.t1 | MTR_3g112290 | 34.634 | 205 | 101 | 8 | 181 | 367 | 165 | 354 | 3.54e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44994.t1 | AT2G23760 | 73.892 | 203 | 38 | 3 | 176 | 367 | 232 | 430 | 2.47e-91 | 286 |
| MS.gene44994.t1 | AT2G23760 | 73.892 | 203 | 38 | 3 | 176 | 367 | 232 | 430 | 2.47e-91 | 286 |
| MS.gene44994.t1 | AT2G23760 | 73.892 | 203 | 38 | 3 | 176 | 367 | 232 | 430 | 2.47e-91 | 286 |
| MS.gene44994.t1 | AT4G36870 | 55.208 | 384 | 126 | 12 | 12 | 367 | 139 | 504 | 8.38e-91 | 283 |
| MS.gene44994.t1 | AT2G23760 | 73.892 | 203 | 38 | 3 | 176 | 367 | 232 | 430 | 1.59e-90 | 286 |
| MS.gene44994.t1 | AT4G36870 | 55.208 | 384 | 126 | 12 | 12 | 367 | 139 | 504 | 2.22e-90 | 282 |
| MS.gene44994.t1 | AT4G36870 | 55.208 | 384 | 126 | 12 | 12 | 367 | 139 | 504 | 5.95e-89 | 283 |
| MS.gene44994.t1 | AT4G36870 | 55.208 | 384 | 126 | 12 | 12 | 367 | 139 | 504 | 5.95e-89 | 283 |
| MS.gene44994.t1 | AT5G41410 | 39.801 | 201 | 103 | 3 | 185 | 367 | 197 | 397 | 1.21e-35 | 137 |
| MS.gene44994.t1 | AT4G34610 | 38.627 | 233 | 105 | 7 | 154 | 367 | 107 | 320 | 1.57e-35 | 136 |
| MS.gene44994.t1 | AT4G34610 | 38.627 | 233 | 105 | 7 | 154 | 367 | 107 | 320 | 1.57e-35 | 136 |
| MS.gene44994.t1 | AT4G34610 | 38.627 | 233 | 105 | 7 | 154 | 367 | 107 | 320 | 1.57e-35 | 136 |
| MS.gene44994.t1 | AT4G34610 | 38.627 | 233 | 105 | 7 | 154 | 367 | 107 | 320 | 1.57e-35 | 136 |
| MS.gene44994.t1 | AT1G19700 | 42.929 | 198 | 96 | 5 | 181 | 367 | 166 | 357 | 2.44e-35 | 136 |
| MS.gene44994.t1 | AT1G19700 | 42.929 | 198 | 96 | 5 | 181 | 367 | 166 | 357 | 2.44e-35 | 136 |
| MS.gene44994.t1 | AT1G19700 | 42.929 | 198 | 96 | 5 | 181 | 367 | 166 | 357 | 2.44e-35 | 136 |
| MS.gene44994.t1 | AT1G19700 | 42.929 | 198 | 96 | 5 | 181 | 367 | 166 | 357 | 2.44e-35 | 136 |
| MS.gene44994.t1 | AT1G19700 | 42.929 | 198 | 96 | 5 | 181 | 367 | 166 | 357 | 2.44e-35 | 136 |
| MS.gene44994.t1 | AT1G75410 | 38.916 | 203 | 99 | 4 | 177 | 367 | 163 | 352 | 7.20e-34 | 130 |
| MS.gene44994.t1 | AT1G75410 | 38.916 | 203 | 99 | 4 | 177 | 367 | 163 | 352 | 2.60e-33 | 130 |
| MS.gene44994.t1 | AT1G75410 | 38.916 | 203 | 99 | 4 | 177 | 367 | 163 | 352 | 2.60e-33 | 130 |
| MS.gene44994.t1 | AT2G16400 | 39.583 | 192 | 105 | 3 | 177 | 367 | 110 | 291 | 1.27e-32 | 127 |
| MS.gene44994.t1 | AT2G35940 | 41.880 | 234 | 102 | 7 | 165 | 367 | 161 | 391 | 1.34e-32 | 129 |
| MS.gene44994.t1 | AT2G35940 | 41.880 | 234 | 102 | 7 | 165 | 367 | 161 | 391 | 1.34e-32 | 129 |
| MS.gene44994.t1 | AT2G35940 | 41.880 | 234 | 102 | 7 | 165 | 367 | 161 | 391 | 1.34e-32 | 129 |
| MS.gene44994.t1 | AT5G02030 | 38.312 | 154 | 84 | 2 | 166 | 315 | 151 | 297 | 2.57e-18 | 87.0 |
| MS.gene44994.t1 | AT2G27220 | 31.100 | 209 | 108 | 7 | 164 | 367 | 57 | 234 | 9.85e-17 | 81.6 |
| MS.gene44994.t1 | AT2G27220 | 31.100 | 209 | 108 | 7 | 164 | 367 | 57 | 234 | 9.85e-17 | 81.6 |
| MS.gene44994.t1 | AT2G27220 | 29.630 | 216 | 120 | 5 | 164 | 367 | 57 | 252 | 2.73e-16 | 80.5 |
| MS.gene44994.t1 | AT2G27990 | 28.000 | 200 | 108 | 8 | 177 | 367 | 258 | 430 | 5.00e-13 | 70.9 |
| MS.gene44994.t1 | AT2G27990 | 28.000 | 200 | 108 | 8 | 177 | 367 | 258 | 430 | 5.20e-13 | 70.5 |
Find 100 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCACCTTGATTTGAATT+AGG | 0.134169 | 8.1:+28976176 | None:intergenic |
| TCAACAACACTTGCCATTTC+TGG | 0.136418 | 8.1:+28976560 | None:intergenic |
| CACCACCTTGATTTGAATTA+GGG | 0.270835 | 8.1:+28976177 | None:intergenic |
| CATCAAGGACATGTTGGATT+TGG | 0.275801 | 8.1:-28976344 | MS.gene44994:CDS |
| CATTTACAAGGAGGTGGATT+AGG | 0.290900 | 8.1:-28976383 | MS.gene44994:CDS |
| CATCCTTTAAGCAACGAAAA+TGG | 0.307732 | 8.1:+28974966 | None:intergenic |
| AGGTGGAGGTGATGGGGATC+TGG | 0.310087 | 8.1:+28976763 | None:intergenic |
| TTTGACCTAGTAATGGGATT+TGG | 0.310831 | 8.1:-28975034 | MS.gene44994:CDS |
| GGTGGTAGTGTTGGTGGTGG+TGG | 0.317496 | 8.1:-28976149 | MS.gene44994:CDS |
| ATGGGGATCTGGTGGTTTGC+GGG | 0.323604 | 8.1:+28976774 | None:intergenic |
| AAACATAGTTGTGAGTTATT+AGG | 0.327586 | 8.1:-28974926 | MS.gene44994:CDS |
| TCCGGAGCCGGAGGGTCTTT+CGG | 0.341454 | 8.1:-28976656 | MS.gene44994:CDS |
| AAGTCTTGGTGTCTCTCCTT+TGG | 0.365611 | 8.1:+28974871 | None:intergenic |
| AACTCATTTGACCTAGTAAT+GGG | 0.377738 | 8.1:-28975040 | MS.gene44994:CDS |
| TAAAGCTGCTCAAGAATTGT+TGG | 0.383373 | 8.1:-28976264 | MS.gene44994:CDS |
| CTGGTTGGTTGTTGTTGAGT+TGG | 0.400267 | 8.1:+28976579 | None:intergenic |
| CAACAACAACCAACCAGAAA+TGG | 0.414214 | 8.1:-28976573 | MS.gene44994:CDS |
| CCTTGGAGATTAGTAGTTGA+AGG | 0.414469 | 8.1:+28976686 | None:intergenic |
| GGAACTTCTTACAAGAATCT+TGG | 0.414813 | 8.1:-28976422 | MS.gene44994:CDS |
| GAGATTAGTAGTTGAAGGAT+TGG | 0.417374 | 8.1:+28976691 | None:intergenic |
| TGAGGTTGAGGTGGAGGTGA+TGG | 0.418643 | 8.1:+28976755 | None:intergenic |
| GTGGAAGAATTAGTAGATGA+AGG | 0.419408 | 8.1:+28976731 | None:intergenic |
| CACCTTTGTCACCTGCTGAT+AGG | 0.423142 | 8.1:-28976097 | MS.gene44994:CDS |
| GAGGTTGAGGTGGAGGTGAT+GGG | 0.424285 | 8.1:+28976756 | None:intergenic |
| GGTGGTGGTGGTAGTGTTGG+TGG | 0.427693 | 8.1:-28976155 | MS.gene44994:CDS |
| ACCGAAAGACCCTCCGGCTC+CGG | 0.428112 | 8.1:+28976655 | None:intergenic |
| GATGGGGATCTGGTGGTTTG+CGG | 0.437468 | 8.1:+28976773 | None:intergenic |
| AAAGATGGTGTGGGGACCTC+AGG | 0.438346 | 8.1:-28974899 | MS.gene44994:CDS |
| AGATTAGTAGTTGAAGGATT+GGG | 0.442153 | 8.1:+28976692 | None:intergenic |
| AGATTCTTGTAAGAAGTTCC+TGG | 0.442794 | 8.1:+28976425 | None:intergenic |
| GTAGATGAAGGATGAGGTTG+AGG | 0.443456 | 8.1:+28976743 | None:intergenic |
| CATTCAGAGGATTTAAGAAT+GGG | 0.464098 | 8.1:-28976491 | MS.gene44994:CDS |
| GCTCAAGAAGGAGGAGGAGG+AGG | 0.466420 | 8.1:-28976620 | MS.gene44994:CDS |
| TCATTCAGAGGATTTAAGAA+TGG | 0.468917 | 8.1:-28976492 | MS.gene44994:CDS |
| CTGCTCCAAATCCCATTACT+AGG | 0.477920 | 8.1:+28975029 | None:intergenic |
| TCAAACCCTAATTCAAATCA+AGG | 0.481474 | 8.1:-28976182 | MS.gene44994:CDS |
| TGTTCAAGAAGTTTAAGTCT+TGG | 0.486979 | 8.1:+28974857 | None:intergenic |
| CATATTCATCAAGGACATGT+TGG | 0.490572 | 8.1:-28976350 | MS.gene44994:CDS |
| TGGAGGTGATGGGGATCTGG+TGG | 0.496556 | 8.1:+28976766 | None:intergenic |
| GGTCTTTCGGTCAATTCACA+TGG | 0.496695 | 8.1:-28976643 | MS.gene44994:CDS |
| GAAGGATGAGGTTGAGGTGG+AGG | 0.498365 | 8.1:+28976749 | None:intergenic |
| CAGAGAGCGTTTCATCAGAT+GGG | 0.502418 | 8.1:-28974821 | MS.gene44994:CDS |
| GATGAAGGATGAGGTTGAGG+TGG | 0.505259 | 8.1:+28976746 | None:intergenic |
| TTCTGAGCTAGTGCCGTGTA+TGG | 0.506424 | 8.1:+28975001 | None:intergenic |
| TGGGCTCAAGAAGGAGGAGG+AGG | 0.513027 | 8.1:-28976623 | MS.gene44994:CDS |
| TCAAATCAAGGTGGTGGTGG+TGG | 0.514328 | 8.1:-28976170 | MS.gene44994:CDS |
| CAAGGTTATAACTCCGGAGC+CGG | 0.515210 | 8.1:-28976668 | MS.gene44994:CDS |
| GCAGAGAGCGTTTCATCAGA+TGG | 0.518676 | 8.1:-28974822 | MS.gene44994:CDS |
| GAACTCATTTGACCTAGTAA+TGG | 0.518871 | 8.1:-28975041 | MS.gene44994:CDS |
| CATCATCATTTACAAGGAGG+TGG | 0.519502 | 8.1:-28976389 | MS.gene44994:CDS |
| AATCAAGGTGGTGGTGGTGG+TGG | 0.520302 | 8.1:-28976167 | MS.gene44994:CDS |
| ATTAGGAGAGAAAGATGGTG+TGG | 0.521359 | 8.1:-28974909 | MS.gene44994:CDS |
| GAATTAGTAGATGAAGGATG+AGG | 0.521991 | 8.1:+28976737 | None:intergenic |
| TTAGGAGAGAAAGATGGTGT+GGG | 0.523003 | 8.1:-28974908 | MS.gene44994:CDS |
| GGTGGTGGTAGTGTTGGTGG+TGG | 0.539601 | 8.1:-28976152 | MS.gene44994:CDS |
| AATTCAAATCAAGGTGGTGG+TGG | 0.540737 | 8.1:-28976173 | MS.gene44994:CDS |
| GTTCATCATCATCATTTACA+AGG | 0.540990 | 8.1:-28976395 | MS.gene44994:CDS |
| GTTTCATCAGATGGGGATGA+TGG | 0.541352 | 8.1:-28974813 | MS.gene44994:CDS |
| GGATGATGGAACAAGAAGCT+TGG | 0.545514 | 8.1:-28974799 | MS.gene44994:CDS |
| AGGTTGAGGTGGAGGTGATG+GGG | 0.545544 | 8.1:+28976757 | None:intergenic |
| GGGAAGTAACATGTGGAGAG+TGG | 0.547310 | 8.1:+28976712 | None:intergenic |
| TGATGCTCAATCCTATCAGC+AGG | 0.547941 | 8.1:+28976086 | None:intergenic |
| CTCTCCTTTGGTCAAACCTG+AGG | 0.552410 | 8.1:+28974883 | None:intergenic |
| CAACACTTGCCATTTCTGGT+TGG | 0.555290 | 8.1:+28976564 | None:intergenic |
| CTCTGAATGATGATGTTGTA+AGG | 0.555325 | 8.1:+28976505 | None:intergenic |
| GGTTATAACTCCGGAGCCGG+AGG | 0.555626 | 8.1:-28976665 | MS.gene44994:CDS |
| TTACTGTGAACAAATGCAAA+TGG | 0.559094 | 8.1:-28975068 | MS.gene44994:CDS |
| AGAATGGGAGATGCTGCTGC+TGG | 0.560836 | 8.1:-28976476 | MS.gene44994:CDS |
| CTTACAACATCATCATTCAG+AGG | 0.564016 | 8.1:-28976504 | MS.gene44994:CDS |
| CAGATTAATCATATTCATCA+AGG | 0.564885 | 8.1:-28976359 | MS.gene44994:CDS |
| GAAATGGCAAGTGTTGTTGA+AGG | 0.566348 | 8.1:-28976557 | MS.gene44994:CDS |
| GAGTTATTAGGAGAGAAAGA+TGG | 0.571608 | 8.1:-28974914 | MS.gene44994:CDS |
| GAATTGACCGAAAGACCCTC+CGG | 0.577407 | 8.1:+28976649 | None:intergenic |
| CCTAATTCAAATCAAGGTGG+TGG | 0.588370 | 8.1:-28976176 | MS.gene44994:CDS |
| CCTTCAACTACTAATCTCCA+AGG | 0.589732 | 8.1:-28976686 | MS.gene44994:CDS |
| ATAGGATTGAGCATCAAAGA+AGG | 0.593277 | 8.1:-28976079 | MS.gene44994:CDS |
| CAATTCACATGGGCTCAAGA+AGG | 0.594901 | 8.1:-28976632 | MS.gene44994:CDS |
| TATTACAATCAAGGAGGACC+AGG | 0.596433 | 8.1:-28976443 | MS.gene44994:CDS |
| GTCTTTCGGTCAATTCACAT+GGG | 0.598907 | 8.1:-28976642 | MS.gene44994:CDS |
| TGGAGCAGCAGTTCCATACA+CGG | 0.601685 | 8.1:-28975014 | MS.gene44994:CDS |
| AATCTCCAAGGTTATAACTC+CGG | 0.603072 | 8.1:-28976674 | MS.gene44994:CDS |
| ATCCTATCAGCAGGTGACAA+AGG | 0.603438 | 8.1:+28976095 | None:intergenic |
| ATGGGAGATGCTGCTGCTGG+TGG | 0.609098 | 8.1:-28976473 | MS.gene44994:CDS |
| CGGCTCCGGAGTTATAACCT+TGG | 0.609675 | 8.1:+28976669 | None:intergenic |
| ACATGGGCTCAAGAAGGAGG+AGG | 0.612112 | 8.1:-28976626 | MS.gene44994:CDS |
| TTCACATGGGCTCAAGAAGG+AGG | 0.621163 | 8.1:-28976629 | MS.gene44994:CDS |
| GCAAGTGTTGTTGAAGGACA+AGG | 0.623009 | 8.1:-28976551 | MS.gene44994:CDS |
| GGGACCTCAGGTTTGACCAA+AGG | 0.623532 | 8.1:-28974887 | MS.gene44994:CDS |
| GATTGAGCATCAAAGAAGGA+AGG | 0.624940 | 8.1:-28976075 | MS.gene44994:intron |
| TAGGTGTTGTTAATGTGTTG+AGG | 0.630100 | 8.1:-28976301 | MS.gene44994:CDS |
| GTTATAACTCCGGAGCCGGA+GGG | 0.640011 | 8.1:-28976664 | MS.gene44994:CDS |
| CATCATCATCATTTACAAGG+AGG | 0.645217 | 8.1:-28976392 | MS.gene44994:CDS |
| AGAGAGCGTTTCATCAGATG+GGG | 0.649369 | 8.1:-28974820 | MS.gene44994:CDS |
| TTTCTATATTACAATCAAGG+AGG | 0.656418 | 8.1:-28976449 | MS.gene44994:CDS |
| AAGGATTGGGAAGTAACATG+TGG | 0.656702 | 8.1:+28976705 | None:intergenic |
| TAGGAGAGAAAGATGGTGTG+GGG | 0.674914 | 8.1:-28974907 | MS.gene44994:CDS |
| CGTTCAGGCAAACCTCTCTG+TGG | 0.700077 | 8.1:+28974773 | None:intergenic |
| AACCCTAATTCAAATCAAGG+TGG | 0.708972 | 8.1:-28976179 | MS.gene44994:CDS |
| CTGTGAACAAATGCAAATGG+TGG | 0.719245 | 8.1:-28975065 | MS.gene44994:CDS |
| GAAGCTTGGAGACCACAGAG+AGG | 0.727720 | 8.1:-28974785 | MS.gene44994:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAACAATAAATATTAGAT+AGG | - | chr8.1:28976602-28976621 | MS.gene44994:CDS | 10.0% |
| !!! | AAAAAGTTTTGATTAAAATA+AGG | + | chr8.1:28975452-28975471 | None:intergenic | 10.0% |
| !!! | ATGTTATAATTATTTTATAC+AGG | - | chr8.1:28976128-28976147 | MS.gene44994:CDS | 10.0% |
| !! | GTTGAAAAATAAAAATAGTT+TGG | - | chr8.1:28975555-28975574 | MS.gene44994:intron | 15.0% |
| !! | TATATATAGATTAGATTAGA+TGG | + | chr8.1:28975608-28975627 | None:intergenic | 15.0% |
| !! | TATGTAATTATTACATCTAA+TGG | - | chr8.1:28976727-28976746 | MS.gene44994:CDS | 15.0% |
| !!! | TTATAATTATTTTATACAGG+TGG | - | chr8.1:28976131-28976150 | MS.gene44994:CDS | 15.0% |
| !! | ATATGATGCATTGTTTAAAA+AGG | + | chr8.1:28976085-28976104 | None:intergenic | 20.0% |
| !! | ATTAGATAGGATAAAAGAAT+GGG | - | chr8.1:28976615-28976634 | MS.gene44994:CDS | 20.0% |
| !! | TATTAGATAGGATAAAAGAA+TGG | - | chr8.1:28976614-28976633 | MS.gene44994:CDS | 20.0% |
| !! | TTTAAAAAGGCTATTTGTAA+CGG | + | chr8.1:28976072-28976091 | None:intergenic | 20.0% |
| !!! | AATAAAAATAGTTTGGTGAA+AGG | - | chr8.1:28975562-28975581 | MS.gene44994:intron | 20.0% |
| !!! | ATAAAAATAGTTTGGTGAAA+GGG | - | chr8.1:28975563-28975582 | MS.gene44994:intron | 20.0% |
| !!! | GTAAATTTTTACAATATGCA+TGG | - | chr8.1:28975917-28975936 | MS.gene44994:intron | 20.0% |
| !!! | TTTTAATCCTAAGATTCTAT+TGG | - | chr8.1:28975472-28975491 | MS.gene44994:intron | 20.0% |
| ! | AAACATAGTTGTGAGTTATT+AGG | - | chr8.1:28976312-28976331 | MS.gene44994:CDS | 25.0% |
| ! | AGTGAAATGAGATATATGAT+TGG | + | chr8.1:28975716-28975735 | None:intergenic | 25.0% |
| ! | ATATCTCATTTCACTAACTT+AGG | - | chr8.1:28975833-28975852 | MS.gene44994:intron | 25.0% |
| ! | CAGATTAATCATATTCATCA+AGG | - | chr8.1:28974879-28974898 | MS.gene44994:CDS | 25.0% |
| ! | GTGAAATGAGATATATGATT+GGG | + | chr8.1:28975715-28975734 | None:intergenic | 25.0% |
| ! | TAATTAATTAAGTAGGTCGA+TGG | - | chr8.1:28975962-28975981 | MS.gene44994:intron | 25.0% |
| ! | TACTATAATGATGAGTACTA+TGG | + | chr8.1:28975781-28975800 | None:intergenic | 25.0% |
| ! | TCAGTCTTAATAATAATCAG+AGG | + | chr8.1:28975661-28975680 | None:intergenic | 25.0% |
| ! | TTAAAAAGGCTATTTGTAAC+GGG | + | chr8.1:28976071-28976090 | None:intergenic | 25.0% |
| ! | TTTCTATATTACAATCAAGG+AGG | - | chr8.1:28974789-28974808 | MS.gene44994:CDS | 25.0% |
| !! | AATTTAAAACCCTAGAGTAA+GGG | - | chr8.1:28976793-28976812 | MS.gene44994:CDS | 25.0% |
| !! | GGTTTTCTATATTACAATCA+AGG | - | chr8.1:28974786-28974805 | MS.gene44994:CDS | 25.0% |
| AACTCATTTGACCTAGTAAT+GGG | - | chr8.1:28976198-28976217 | MS.gene44994:CDS | 30.0% | |
| AAGAAAATGTTCAAAAAGCC+AGG | + | chr8.1:28976511-28976530 | None:intergenic | 30.0% | |
| AGATTAGTAGTTGAAGGATT+GGG | + | chr8.1:28974549-28974568 | None:intergenic | 30.0% | |
| CATTCAGAGGATTTAAGAAT+GGG | - | chr8.1:28974747-28974766 | MS.gene44994:intron | 30.0% | |
| GAGTATCTTGAATTTCAGAA+AGG | - | chr8.1:28975363-28975382 | MS.gene44994:intron | 30.0% | |
| GTTCATCATCATCATTTACA+AGG | - | chr8.1:28974843-28974862 | MS.gene44994:CDS | 30.0% | |
| TCAAACCCTAATTCAAATCA+AGG | - | chr8.1:28975056-28975075 | MS.gene44994:CDS | 30.0% | |
| TCATCTTCTTCTTCTTCTTT+AGG | - | chr8.1:28974918-28974937 | MS.gene44994:CDS | 30.0% | |
| TCATTCAGAGGATTTAAGAA+TGG | - | chr8.1:28974746-28974765 | MS.gene44994:intron | 30.0% | |
| TGTTCAAGAAGTTTAAGTCT+TGG | + | chr8.1:28976384-28976403 | None:intergenic | 30.0% | |
| TTACTGTGAACAAATGCAAA+TGG | - | chr8.1:28976170-28976189 | MS.gene44994:CDS | 30.0% | |
| TTTATTACAAACCACACGAT+GGG | - | chr8.1:28975995-28976014 | MS.gene44994:intron | 30.0% | |
| ! | ATTTAAAACCCTAGAGTAAG+GGG | - | chr8.1:28976794-28976813 | MS.gene44994:CDS | 30.0% |
| ! | CAATTTAAAACCCTAGAGTA+AGG | - | chr8.1:28976792-28976811 | MS.gene44994:CDS | 30.0% |
| ! | TTGGAAGAATTTTGTAGTGT+TGG | - | chr8.1:28974993-28975012 | MS.gene44994:CDS | 30.0% |
| !! | AAGAATTTTGTAGTGTTGGA+AGG | - | chr8.1:28974997-28975016 | MS.gene44994:CDS | 30.0% |
| !! | AGAATTTTGTAGTGTTGGAA+GGG | - | chr8.1:28974998-28975017 | MS.gene44994:CDS | 30.0% |
| AAAATGTTGACAGATCGTTC+AGG | + | chr8.1:28976483-28976502 | None:intergenic | 35.0% | |
| AACCCTAATTCAAATCAAGG+TGG | - | chr8.1:28975059-28975078 | MS.gene44994:CDS | 35.0% | |
| AATCTCCAAGGTTATAACTC+CGG | - | chr8.1:28974564-28974583 | MS.gene44994:intron | 35.0% | |
| AATTTAGACCCCTTACTCTA+GGG | + | chr8.1:28976805-28976824 | None:intergenic | 35.0% | |
| AATTTCAGAAAGGCAAAAGC+CGG | - | chr8.1:28975373-28975392 | MS.gene44994:intron | 35.0% | |
| AGATTCTTGTAAGAAGTTCC+TGG | + | chr8.1:28974816-28974835 | None:intergenic | 35.0% | |
| ATAGGATTGAGCATCAAAGA+AGG | - | chr8.1:28975159-28975178 | MS.gene44994:intron | 35.0% | |
| CATATTCATCAAGGACATGT+TGG | - | chr8.1:28974888-28974907 | MS.gene44994:CDS | 35.0% | |
| CATCATCATCATTTACAAGG+AGG | - | chr8.1:28974846-28974865 | MS.gene44994:CDS | 35.0% | |
| CATCCTTTAAGCAACGAAAA+TGG | + | chr8.1:28976275-28976294 | None:intergenic | 35.0% | |
| CTTACAACATCATCATTCAG+AGG | - | chr8.1:28974734-28974753 | MS.gene44994:intron | 35.0% | |
| CTTCTCACCAATAGAATCTT+AGG | + | chr8.1:28975482-28975501 | None:intergenic | 35.0% | |
| CTTTATTACAAACCACACGA+TGG | - | chr8.1:28975994-28976013 | MS.gene44994:intron | 35.0% | |
| GAACTCATTTGACCTAGTAA+TGG | - | chr8.1:28976197-28976216 | MS.gene44994:CDS | 35.0% | |
| GAATTAGTAGATGAAGGATG+AGG | + | chr8.1:28974504-28974523 | None:intergenic | 35.0% | |
| GAGATTAGTAGTTGAAGGAT+TGG | + | chr8.1:28974550-28974569 | None:intergenic | 35.0% | |
| GAGTTATTAGGAGAGAAAGA+TGG | - | chr8.1:28976324-28976343 | MS.gene44994:CDS | 35.0% | |
| GGAACTTCTTACAAGAATCT+TGG | - | chr8.1:28974816-28974835 | MS.gene44994:CDS | 35.0% | |
| GTGGAAGAATTAGTAGATGA+AGG | + | chr8.1:28974510-28974529 | None:intergenic | 35.0% | |
| TAAAGCTGCTCAAGAATTGT+TGG | - | chr8.1:28974974-28974993 | MS.gene44994:CDS | 35.0% | |
| TCTCATTTCACTAACTTAGG+AGG | - | chr8.1:28975836-28975855 | MS.gene44994:intron | 35.0% | |
| ! | CACCACCTTGATTTGAATTA+GGG | + | chr8.1:28975064-28975083 | None:intergenic | 35.0% |
| ! | CTCTGAATGATGATGTTGTA+AGG | + | chr8.1:28974736-28974755 | None:intergenic | 35.0% |
| ! | GCTTTCTTTTCTGTTTGGTT+TGG | + | chr8.1:28975684-28975703 | None:intergenic | 35.0% |
| ! | TGAGTGCTTTCTTTTCTGTT+TGG | + | chr8.1:28975689-28975708 | None:intergenic | 35.0% |
| ! | TTCACTAACTTAGGAGGTAT+CGG | - | chr8.1:28975842-28975861 | MS.gene44994:intron | 35.0% |
| ! | TTTGACCTAGTAATGGGATT+TGG | - | chr8.1:28976204-28976223 | MS.gene44994:CDS | 35.0% |
| !! | GAATTTTGTAGTGTTGGAAG+GGG | - | chr8.1:28974999-28975018 | MS.gene44994:CDS | 35.0% |
| !! | TAGGTGTTGTTAATGTGTTG+AGG | - | chr8.1:28974937-28974956 | MS.gene44994:CDS | 35.0% |
| AAGGATTGGGAAGTAACATG+TGG | + | chr8.1:28974536-28974555 | None:intergenic | 40.0% | |
| AAGGGGTCTAAATTCTTTGC+AGG | - | chr8.1:28976811-28976830 | MS.gene44994:CDS | 40.0% | |
| AGAGTGAGAGAAAGAACGTA+CGG | + | chr8.1:28976537-28976556 | None:intergenic | 40.0% | |
| ATAGTAGGGTTCCACAACTT+AGG | - | chr8.1:28975403-28975422 | MS.gene44994:intron | 40.0% | |
| ATTAGGAGAGAAAGATGGTG+TGG | - | chr8.1:28976329-28976348 | MS.gene44994:CDS | 40.0% | |
| CAACAACAACCAACCAGAAA+TGG | - | chr8.1:28974665-28974684 | MS.gene44994:intron | 40.0% | |
| CATCAAGGACATGTTGGATT+TGG | - | chr8.1:28974894-28974913 | MS.gene44994:CDS | 40.0% | |
| CATCATCATTTACAAGGAGG+TGG | - | chr8.1:28974849-28974868 | MS.gene44994:CDS | 40.0% | |
| CCTAATTCAAATCAAGGTGG+TGG | - | chr8.1:28975062-28975081 | MS.gene44994:CDS | 40.0% | |
| CCTTCAACTACTAATCTCCA+AGG | - | chr8.1:28974552-28974571 | MS.gene44994:intron | 40.0% | |
| CCTTGGAGATTAGTAGTTGA+AGG | + | chr8.1:28974555-28974574 | None:intergenic | 40.0% | |
| CTGTGAACAAATGCAAATGG+TGG | - | chr8.1:28976173-28976192 | MS.gene44994:CDS | 40.0% | |
| GAATTTAGACCCCTTACTCT+AGG | + | chr8.1:28976806-28976825 | None:intergenic | 40.0% | |
| GATTGAGCATCAAAGAAGGA+AGG | - | chr8.1:28975163-28975182 | MS.gene44994:intron | 40.0% | |
| GGGTGGAAGATAGATTCATT+CGG | + | chr8.1:28976051-28976070 | None:intergenic | 40.0% | |
| GTCTTTCGGTCAATTCACAT+GGG | - | chr8.1:28974596-28974615 | MS.gene44994:intron | 40.0% | |
| GTTCATGAGAAAAAGCTGCA+TGG | + | chr8.1:28974445-28974464 | None:intergenic | 40.0% | |
| TACCAACTGTTCCTAAGTTG+TGG | + | chr8.1:28975417-28975436 | None:intergenic | 40.0% | |
| TATGTGTAGACCTTGACTCT+TGG | + | chr8.1:28975274-28975293 | None:intergenic | 40.0% | |
| TATTACAATCAAGGAGGACC+AGG | - | chr8.1:28974795-28974814 | MS.gene44994:CDS | 40.0% | |
| TTAGGAGAGAAAGATGGTGT+GGG | - | chr8.1:28976330-28976349 | MS.gene44994:CDS | 40.0% | |
| TTCCACAACTTAGGAACAGT+TGG | - | chr8.1:28975412-28975431 | MS.gene44994:intron | 40.0% | |
| ! | AAAAGGCTATTTGTAACGGG+TGG | + | chr8.1:28976068-28976087 | None:intergenic | 40.0% |
| ! | AATTCAAATCAAGGTGGTGG+TGG | - | chr8.1:28975065-28975084 | MS.gene44994:CDS | 40.0% |
| ! | CAACTTAGGAACAGTTGGTA+AGG | - | chr8.1:28975417-28975436 | MS.gene44994:intron | 40.0% |
| ! | CATTTACAAGGAGGTGGATT+AGG | - | chr8.1:28974855-28974874 | MS.gene44994:CDS | 40.0% |
| ! | CCACCACCTTGATTTGAATT+AGG | + | chr8.1:28975065-28975084 | None:intergenic | 40.0% |
| ! | GAAATGGCAAGTGTTGTTGA+AGG | - | chr8.1:28974681-28974700 | MS.gene44994:intron | 40.0% |
| ! | TCAACAACACTTGCCATTTC+TGG | + | chr8.1:28974681-28974700 | None:intergenic | 40.0% |
| !! | ACGCCATTTTCGTTGCTTAA+AGG | - | chr8.1:28976269-28976288 | MS.gene44994:CDS | 40.0% |
| !! | TCACTAACTTAGGAGGTATC+GGG | - | chr8.1:28975843-28975862 | MS.gene44994:intron | 40.0% |
| AAAGCCGGCTGCTATATAGT+AGG | - | chr8.1:28975388-28975407 | MS.gene44994:intron | 45.0% | |
| AAGCCGGCTGCTATATAGTA+GGG | - | chr8.1:28975389-28975408 | MS.gene44994:intron | 45.0% | |
| ACTACTCATTTCCCATCGTG+TGG | + | chr8.1:28976009-28976028 | None:intergenic | 45.0% | |
| ACTTCTAACCATGCTTGACG+AGG | - | chr8.1:28975190-28975209 | MS.gene44994:intron | 45.0% | |
| AGAGAAAGAAGGAGAGAGAG+AGG | + | chr8.1:28975231-28975250 | None:intergenic | 45.0% | |
| ATCCTATCAGCAGGTGACAA+AGG | + | chr8.1:28975146-28975165 | None:intergenic | 45.0% | |
| ATCTCTGTGAGAACGTAGCA+AGG | - | chr8.1:28976659-28976678 | MS.gene44994:CDS | 45.0% | |
| ATTACATGCCTCGTCAAGCA+TGG | + | chr8.1:28975201-28975220 | None:intergenic | 45.0% | |
| CAATTCACATGGGCTCAAGA+AGG | - | chr8.1:28974606-28974625 | MS.gene44994:intron | 45.0% | |
| CTCTCATTCACCAAGAGTCA+AGG | - | chr8.1:28975261-28975280 | MS.gene44994:intron | 45.0% | |
| CTGCTCCAAATCCCATTACT+AGG | + | chr8.1:28976212-28976231 | None:intergenic | 45.0% | |
| CTTGGTGAATGAGAGAAGGT+AGG | + | chr8.1:28975256-28975275 | None:intergenic | 45.0% | |
| GAACCCTACTATATAGCAGC+CGG | + | chr8.1:28975395-28975414 | None:intergenic | 45.0% | |
| GAAGGTAGGAGAGAGAAAGA+AGG | + | chr8.1:28975242-28975261 | None:intergenic | 45.0% | |
| GACTCTTGGTGAATGAGAGA+AGG | + | chr8.1:28975260-28975279 | None:intergenic | 45.0% | |
| GAGAAAGAAGGAGAGAGAGA+GGG | + | chr8.1:28975230-28975249 | None:intergenic | 45.0% | |
| GGTCTTTCGGTCAATTCACA+TGG | - | chr8.1:28974595-28974614 | MS.gene44994:intron | 45.0% | |
| GTAGATGAAGGATGAGGTTG+AGG | + | chr8.1:28974498-28974517 | None:intergenic | 45.0% | |
| GTTTCATCAGATGGGGATGA+TGG | - | chr8.1:28976425-28976444 | MS.gene44994:CDS | 45.0% | |
| TAGGAGAGAAAGATGGTGTG+GGG | - | chr8.1:28976331-28976350 | MS.gene44994:CDS | 45.0% | |
| TGATGCTCAATCCTATCAGC+AGG | + | chr8.1:28975155-28975174 | None:intergenic | 45.0% | |
| ! | CTGGTTGGTTGTTGTTGAGT+TGG | + | chr8.1:28974662-28974681 | None:intergenic | 45.0% |
| ! | GCAAGTGTTGTTGAAGGACA+AGG | - | chr8.1:28974687-28974706 | MS.gene44994:intron | 45.0% |
| !! | AAGTCTTGGTGTCTCTCCTT+TGG | + | chr8.1:28976370-28976389 | None:intergenic | 45.0% |
| !! | AGAGAGCGTTTCATCAGATG+GGG | - | chr8.1:28976418-28976437 | MS.gene44994:CDS | 45.0% |
| !! | CAACACTTGCCATTTCTGGT+TGG | + | chr8.1:28974677-28974696 | None:intergenic | 45.0% |
| !! | CAGAGAGCGTTTCATCAGAT+GGG | - | chr8.1:28976417-28976436 | MS.gene44994:CDS | 45.0% |
| !! | CTGTCAACATTTTGAGAGCC+TGG | - | chr8.1:28976490-28976509 | MS.gene44994:CDS | 45.0% |
| !! | GGATGATGGAACAAGAAGCT+TGG | - | chr8.1:28976439-28976458 | MS.gene44994:CDS | 45.0% |
| !! | TATAAAATAATTAATTAAGT+AGG | - | chr8.1:28975955-28975974 | MS.gene44994:intron | 5.0% |
| !! | TATAAAATAATTATAACATA+TGG | + | chr8.1:28976127-28976146 | None:intergenic | 5.0% |
| !!! | ACTTAATTAATTATTTTATA+TGG | + | chr8.1:28975955-28975974 | None:intergenic | 5.0% |
| CAAGGTTATAACTCCGGAGC+CGG | - | chr8.1:28974570-28974589 | MS.gene44994:intron | 50.0% | |
| CACCTTTGTCACCTGCTGAT+AGG | - | chr8.1:28975141-28975160 | MS.gene44994:intron | 50.0% | |
| CTCTCCTTTGGTCAAACCTG+AGG | + | chr8.1:28976358-28976377 | None:intergenic | 50.0% | |
| GAATTGACCGAAAGACCCTC+CGG | + | chr8.1:28974592-28974611 | None:intergenic | 50.0% | |
| GATGAAGGATGAGGTTGAGG+TGG | + | chr8.1:28974495-28974514 | None:intergenic | 50.0% | |
| GGGAAGTAACATGTGGAGAG+TGG | + | chr8.1:28974529-28974548 | None:intergenic | 50.0% | |
| TGGAGCAGCAGTTCCATACA+CGG | - | chr8.1:28976224-28976243 | MS.gene44994:CDS | 50.0% | |
| TTCACATGGGCTCAAGAAGG+AGG | - | chr8.1:28974609-28974628 | MS.gene44994:intron | 50.0% | |
| TTCTGAGCTAGTGCCGTGTA+TGG | + | chr8.1:28976240-28976259 | None:intergenic | 50.0% | |
| !! | GCAGAGAGCGTTTCATCAGA+TGG | - | chr8.1:28976416-28976435 | MS.gene44994:CDS | 50.0% |
| !! | TCAAATCAAGGTGGTGGTGG+TGG | - | chr8.1:28975068-28975087 | MS.gene44994:CDS | 50.0% |
| AAAGATGGTGTGGGGACCTC+AGG | - | chr8.1:28976339-28976358 | MS.gene44994:CDS | 55.0% | |
| ACATGGGCTCAAGAAGGAGG+AGG | - | chr8.1:28974612-28974631 | MS.gene44994:intron | 55.0% | |
| AGAATGGGAGATGCTGCTGC+TGG | - | chr8.1:28974762-28974781 | MS.gene44994:intron | 55.0% | |
| AGGTTGAGGTGGAGGTGATG+GGG | + | chr8.1:28974484-28974503 | None:intergenic | 55.0% | |
| CGGCTCCGGAGTTATAACCT+TGG | + | chr8.1:28974572-28974591 | None:intergenic | 55.0% | |
| CGTTCAGGCAAACCTCTCTG+TGG | + | chr8.1:28976468-28976487 | None:intergenic | 55.0% | |
| GAAGCTTGGAGACCACAGAG+AGG | - | chr8.1:28976453-28976472 | MS.gene44994:CDS | 55.0% | |
| GAAGGATGAGGTTGAGGTGG+AGG | + | chr8.1:28974492-28974511 | None:intergenic | 55.0% | |
| GAGGTTGAGGTGGAGGTGAT+GGG | + | chr8.1:28974485-28974504 | None:intergenic | 55.0% | |
| GATGGGGATCTGGTGGTTTG+CGG | + | chr8.1:28974468-28974487 | None:intergenic | 55.0% | |
| GGGACCTCAGGTTTGACCAA+AGG | - | chr8.1:28976351-28976370 | MS.gene44994:CDS | 55.0% | |
| GTTATAACTCCGGAGCCGGA+GGG | - | chr8.1:28974574-28974593 | MS.gene44994:intron | 55.0% | |
| TGAGGTTGAGGTGGAGGTGA+TGG | + | chr8.1:28974486-28974505 | None:intergenic | 55.0% | |
| ! | ATGGGGATCTGGTGGTTTGC+GGG | + | chr8.1:28974467-28974486 | None:intergenic | 55.0% |
| !! | AATCAAGGTGGTGGTGGTGG+TGG | - | chr8.1:28975071-28975090 | MS.gene44994:CDS | 55.0% |
| ATGGGAGATGCTGCTGCTGG+TGG | - | chr8.1:28974765-28974784 | MS.gene44994:intron | 60.0% | |
| GCTCAAGAAGGAGGAGGAGG+AGG | - | chr8.1:28974618-28974637 | MS.gene44994:intron | 60.0% | |
| GGTTATAACTCCGGAGCCGG+AGG | - | chr8.1:28974573-28974592 | MS.gene44994:intron | 60.0% | |
| TGGGCTCAAGAAGGAGGAGG+AGG | - | chr8.1:28974615-28974634 | MS.gene44994:intron | 60.0% | |
| !! | AGGTGGAGGTGATGGGGATC+TGG | + | chr8.1:28974478-28974497 | None:intergenic | 60.0% |
| !! | GGTGGTAGTGTTGGTGGTGG+TGG | - | chr8.1:28975089-28975108 | MS.gene44994:CDS | 60.0% |
| !! | GGTGGTGGTAGTGTTGGTGG+TGG | - | chr8.1:28975086-28975105 | MS.gene44994:CDS | 60.0% |
| !! | GGTGGTGGTGGTAGTGTTGG+TGG | - | chr8.1:28975083-28975102 | MS.gene44994:CDS | 60.0% |
| !! | GGTGGTGGTGGTGGTAGTGT+TGG | - | chr8.1:28975080-28975099 | MS.gene44994:CDS | 60.0% |
| !! | TGGAGGTGATGGGGATCTGG+TGG | + | chr8.1:28974475-28974494 | None:intergenic | 60.0% |
| ACCGAAAGACCCTCCGGCTC+CGG | + | chr8.1:28974586-28974605 | None:intergenic | 65.0% | |
| TCCGGAGCCGGAGGGTCTTT+CGG | - | chr8.1:28974582-28974601 | MS.gene44994:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 28974411 | 28976849 | 28974411 | ID=MS.gene44994 |
| chr8.1 | mRNA | 28974411 | 28976849 | 28974411 | ID=MS.gene44994.t1;Parent=MS.gene44994 |
| chr8.1 | exon | 28976076 | 28976849 | 28976076 | ID=MS.gene44994.t1.exon1;Parent=MS.gene44994.t1 |
| chr8.1 | CDS | 28976076 | 28976849 | 28976076 | ID=cds.MS.gene44994.t1;Parent=MS.gene44994.t1 |
| chr8.1 | exon | 28974786 | 28975110 | 28974786 | ID=MS.gene44994.t1.exon2;Parent=MS.gene44994.t1 |
| chr8.1 | CDS | 28974786 | 28975110 | 28974786 | ID=cds.MS.gene44994.t1;Parent=MS.gene44994.t1 |
| chr8.1 | exon | 28974411 | 28974427 | 28974411 | ID=MS.gene44994.t1.exon3;Parent=MS.gene44994.t1 |
| chr8.1 | CDS | 28974411 | 28974427 | 28974411 | ID=cds.MS.gene44994.t1;Parent=MS.gene44994.t1 |
| Gene Sequence |
| Protein sequence |
