Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44996.t1 | XP_003629519.1 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 3.30E-264 | 920.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44996.t1 | Q8W4F0 | 71.9 | 562 | 122 | 5 | 1 | 535 | 1 | 553 | 1.7e-197 | 690.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44996.t1 | G7LFK8 | 97.4 | 535 | 10 | 1 | 1 | 535 | 1 | 531 | 2.4e-264 | 920.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44996.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050640 | MS.gene44996 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene44996 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene051525 | MS.gene44996 | 0.838529 | 2.72E-57 | -1.69E-46 |
| MS.gene051568 | MS.gene44996 | 0.834335 | 3.18E-56 | -1.69E-46 |
| MS.gene051588 | MS.gene44996 | 0.819712 | 1.01E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene44996 | -0.826891 | 2.11E-54 | -1.69E-46 |
| MS.gene053169 | MS.gene44996 | 0.82343 | 1.39E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene44996 | 0.809603 | 1.74E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene44996 | 0.840259 | 9.68E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene44996 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene054920 | MS.gene44996 | 0.846185 | 2.55E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene44996 | 0.801678 | 8.04E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene44996 | 0.810581 | 1.07E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene44996 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene44996 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene44996 | 0.808294 | 3.32E-50 | -1.69E-46 |
| MS.gene058935 | MS.gene44996 | 0.809007 | 2.34E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene44996 | 0.816546 | 5.23E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene44996 | 0.816507 | 5.34E-52 | -1.69E-46 |
| MS.gene059958 | MS.gene44996 | 0.822898 | 1.85E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44996.t1 | MTR_8g078410 | 96.449 | 535 | 15 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1070 |
| MS.gene44996.t1 | MTR_5g018900 | 76.119 | 536 | 115 | 5 | 1 | 535 | 1 | 524 | 0.0 | 809 |
| MS.gene44996.t1 | MTR_1g021835 | 57.757 | 535 | 159 | 8 | 1 | 535 | 1 | 468 | 0.0 | 582 |
| MS.gene44996.t1 | MTR_5g081160 | 65.416 | 373 | 119 | 3 | 163 | 535 | 141 | 503 | 2.45e-175 | 504 |
| MS.gene44996.t1 | MTR_3g069410 | 57.047 | 447 | 172 | 6 | 105 | 535 | 70 | 512 | 5.89e-166 | 481 |
| MS.gene44996.t1 | MTR_1g021835 | 56.840 | 424 | 124 | 7 | 1 | 424 | 1 | 365 | 7.10e-159 | 459 |
| MS.gene44996.t1 | MTR_1g021835 | 54.011 | 374 | 114 | 6 | 1 | 371 | 1 | 319 | 1.27e-129 | 380 |
| MS.gene44996.t1 | MTR_5g018910 | 63.441 | 93 | 33 | 1 | 156 | 247 | 488 | 580 | 1.47e-34 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44996.t1 | AT4G36860 | 68.149 | 562 | 143 | 5 | 1 | 535 | 1 | 553 | 0.0 | 734 |
| MS.gene44996.t1 | AT4G36860 | 65.470 | 585 | 144 | 5 | 1 | 535 | 1 | 577 | 0.0 | 725 |
| MS.gene44996.t1 | AT4G36860 | 66.741 | 451 | 120 | 4 | 1 | 424 | 1 | 448 | 0.0 | 586 |
| MS.gene44996.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| MS.gene44996.t1 | AT1G19270 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| MS.gene44996.t1 | AT2G39830 | 59.020 | 449 | 155 | 7 | 111 | 535 | 75 | 518 | 0.0 | 521 |
| MS.gene44996.t1 | AT2G39830 | 66.220 | 373 | 121 | 3 | 163 | 535 | 160 | 527 | 1.38e-179 | 516 |
| MS.gene44996.t1 | AT2G39830 | 65.691 | 376 | 121 | 4 | 163 | 535 | 160 | 530 | 2.77e-177 | 510 |
| MS.gene44996.t1 | AT5G66610 | 44.444 | 513 | 248 | 11 | 28 | 529 | 65 | 551 | 4.01e-134 | 401 |
| MS.gene44996.t1 | AT2G39830 | 65.233 | 279 | 94 | 3 | 163 | 440 | 160 | 436 | 4.94e-133 | 394 |
| MS.gene44996.t1 | AT5G66610 | 48.826 | 426 | 196 | 8 | 111 | 529 | 14 | 424 | 8.04e-131 | 388 |
| MS.gene44996.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 170 | 640 | 7.56e-129 | 390 |
| MS.gene44996.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene44996.t1 | AT5G66620 | 45.010 | 491 | 244 | 11 | 44 | 528 | 161 | 631 | 8.88e-129 | 390 |
| MS.gene44996.t1 | AT5G66610 | 42.222 | 540 | 248 | 12 | 28 | 529 | 65 | 578 | 5.62e-128 | 386 |
| MS.gene44996.t1 | AT5G17890 | 51.309 | 382 | 174 | 6 | 159 | 535 | 1234 | 1608 | 1.81e-112 | 366 |
| MS.gene44996.t1 | AT5G66630 | 47.989 | 373 | 176 | 7 | 159 | 528 | 341 | 698 | 4.96e-109 | 341 |
| MS.gene44996.t1 | AT5G66640 | 40.272 | 514 | 236 | 18 | 33 | 528 | 10 | 470 | 1.89e-100 | 311 |
| MS.gene44996.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.90e-100 | 311 |
| MS.gene44996.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.90e-100 | 311 |
| MS.gene44996.t1 | AT5G66640 | 48.023 | 354 | 173 | 8 | 182 | 528 | 120 | 469 | 4.87e-100 | 311 |
| MS.gene44996.t1 | AT5G66640 | 49.691 | 324 | 154 | 7 | 212 | 528 | 10 | 331 | 5.85e-96 | 295 |
| MS.gene44996.t1 | AT5G66640 | 36.965 | 514 | 249 | 19 | 33 | 528 | 10 | 466 | 3.16e-83 | 267 |
| MS.gene44996.t1 | AT5G66640 | 43.220 | 354 | 186 | 9 | 182 | 528 | 120 | 465 | 5.46e-83 | 266 |
| MS.gene44996.t1 | AT5G66620 | 38.810 | 353 | 191 | 10 | 44 | 390 | 161 | 494 | 1.19e-72 | 240 |
Find 119 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTTATAGCATAATTTA+TGG | 0.189171 | 8.1:-29037130 | None:intergenic |
| ATCCTCGTCCTGAATGTTTA+TGG | 0.190323 | 8.1:-29035739 | None:intergenic |
| AGTATAGAGCACATCCTTTC+TGG | 0.193526 | 8.1:+29037663 | MS.gene44996:CDS |
| CATGCTTGGCTTAGACTTAA+AGG | 0.236159 | 8.1:+29038808 | MS.gene44996:CDS |
| GTGTCTCGATTCGGCTATTA+TGG | 0.241072 | 8.1:+29037931 | MS.gene44996:CDS |
| AACCAGGCAGTGCTCAAGTA+TGG | 0.287660 | 8.1:+29039186 | MS.gene44996:CDS |
| CATATTCCTTCTTCAACTTC+AGG | 0.292654 | 8.1:-29038937 | None:intergenic |
| CATCGACGTATCAGCCTAAA+AGG | 0.297552 | 8.1:-29038437 | None:intergenic |
| CGAGGATACACCGGGAAATA+TGG | 0.299410 | 8.1:+29035755 | MS.gene44996:CDS |
| GTCCTCTGGTTTCAGGTAAA+TGG | 0.302701 | 8.1:-29038228 | None:intergenic |
| AAGCAAAGTCCTCTGGTTTC+AGG | 0.302816 | 8.1:-29038235 | None:intergenic |
| GCAGCAAATTCCTATGCTTT+TGG | 0.308444 | 8.1:+29038024 | MS.gene44996:CDS |
| AACTTCCGGTCATTCGGATA+TGG | 0.336770 | 8.1:-29039227 | None:intergenic |
| TCATTACAGTATTCCATGTC+TGG | 0.337779 | 8.1:+29037095 | MS.gene44996:intron |
| GGCGAAAAGAGGTTTGTAAA+AGG | 0.349058 | 8.1:-29036525 | None:intergenic |
| ACCAAGTTCCTTCTCAAAAT+CGG | 0.357058 | 8.1:-29039097 | None:intergenic |
| TGATGATGCTTCTTCACTTC+CGG | 0.357113 | 8.1:-29039007 | None:intergenic |
| TTACCATAAATTATGCTATA+AGG | 0.387755 | 8.1:+29037127 | MS.gene44996:CDS |
| GTTCGAACCCTTTAGAAACT+TGG | 0.408812 | 8.1:-29035717 | None:intergenic |
| TGCTTCTTCACTTCCGGAGC+CGG | 0.411249 | 8.1:-29039001 | None:intergenic |
| TTAGATTCAGAGATCTATTC+CGG | 0.411303 | 8.1:+29038982 | MS.gene44996:CDS |
| GGTTCGAACCATAAACATTC+AGG | 0.417018 | 8.1:+29035731 | MS.gene44996:CDS |
| CTGGCTTACCAAGTTTCTAA+AGG | 0.419265 | 8.1:+29035709 | MS.gene44996:CDS |
| GTTACAGAGGAAGATCATAA+AGG | 0.421978 | 8.1:+29035986 | MS.gene44996:CDS |
| GTGAGCTATCTGTCTCAATC+TGG | 0.433359 | 8.1:-29039134 | None:intergenic |
| ATGGAAAACTTCCGGTCATT+CGG | 0.433899 | 8.1:-29039233 | None:intergenic |
| TCGCATAGTTACCTGTATAC+AGG | 0.438440 | 8.1:-29036546 | None:intergenic |
| GCTGGCTGCAATGCCGAGAT+TGG | 0.442433 | 8.1:+29036826 | MS.gene44996:CDS |
| TTCTGACAAGCAAAGTCCTC+TGG | 0.446916 | 8.1:-29038242 | None:intergenic |
| TGGCTTACCAAGTTTCTAAA+GGG | 0.451933 | 8.1:+29035710 | MS.gene44996:CDS |
| TTACAGAGGAAGATCATAAA+GGG | 0.469977 | 8.1:+29035987 | MS.gene44996:CDS |
| GAAAATAAGATTGTATGGGC+TGG | 0.473993 | 8.1:+29035690 | None:intergenic |
| ATTTCATTATGGAAAACTTC+CGG | 0.475409 | 8.1:-29039241 | None:intergenic |
| TTCCTCTACATCTTCAAAGA+AGG | 0.477132 | 8.1:+29039065 | MS.gene44996:CDS |
| CGAACCTCGTAATCAGTGAT+TGG | 0.478079 | 8.1:-29036922 | None:intergenic |
| CATCTTCAAAGAAGGGTAAA+CGG | 0.478692 | 8.1:+29039073 | MS.gene44996:CDS |
| AAGGCCATACAAAACAAGTA+TGG | 0.479856 | 8.1:-29038471 | None:intergenic |
| AGGAAGATGAACAACTTGCC+AGG | 0.481242 | 8.1:+29036439 | MS.gene44996:CDS |
| CTCATGAAATGATGCATGCT+TGG | 0.482818 | 8.1:+29038794 | MS.gene44996:CDS |
| TGATTGGAAGTTTGCAAGCA+TGG | 0.482821 | 8.1:-29036906 | None:intergenic |
| CAAACTTTCTTGAATTGCCC+TGG | 0.485539 | 8.1:-29036457 | None:intergenic |
| CCATGTTGCTAAAATTCAAC+AGG | 0.488050 | 8.1:+29036383 | MS.gene44996:CDS |
| CGGTAGCCTGCTCCTATACT+TGG | 0.493239 | 8.1:-29038392 | None:intergenic |
| GTATTTCAAGATAGAGAGGT+TGG | 0.497395 | 8.1:-29037967 | None:intergenic |
| TCAGAGATCTATTCCGGCTC+CGG | 0.497689 | 8.1:+29038988 | MS.gene44996:CDS |
| TGAGTTGCATGGGAGCTGTA+TGG | 0.499390 | 8.1:+29036863 | MS.gene44996:CDS |
| TTATAGCATAATTTATGGTA+AGG | 0.500224 | 8.1:-29037125 | None:intergenic |
| TCTGTCGTGTCCATATTTCC+CGG | 0.502358 | 8.1:-29035765 | None:intergenic |
| GTGCCATCGCGCTCGTGTGA+TGG | 0.502362 | 8.1:-29037701 | None:intergenic |
| GTGTCTTGAGTGTCTCGATT+CGG | 0.506058 | 8.1:+29037922 | MS.gene44996:CDS |
| ACAGATAGCTCACCAGCCTA+TGG | 0.509351 | 8.1:+29039144 | MS.gene44996:CDS |
| GCCCATACTTGAGCACTGCC+TGG | 0.512523 | 8.1:-29039188 | None:intergenic |
| ATATGGACACGACAGAGATT+CGG | 0.513953 | 8.1:+29035772 | MS.gene44996:CDS |
| TATATTTATAGGTTACTGAC+AGG | 0.516589 | 8.1:+29038760 | MS.gene44996:intron |
| TGGATTTAGAGAGGGTAACC+AGG | 0.516593 | 8.1:+29039170 | MS.gene44996:CDS |
| CAGATCCCACAAAATTCAGC+TGG | 0.520653 | 8.1:+29037632 | MS.gene44996:intron |
| TTGTTGTAGCTGTCAAAGAA+TGG | 0.521248 | 8.1:+29037730 | MS.gene44996:CDS |
| CATTACAGTATTCCATGTCT+GGG | 0.527623 | 8.1:+29037096 | MS.gene44996:intron |
| AAACCTTCCATGGCCAATCT+CGG | 0.530954 | 8.1:-29036839 | None:intergenic |
| AGGAGACCAAGTATAGGAGC+AGG | 0.531668 | 8.1:+29038386 | MS.gene44996:CDS |
| CTAAATCCATCTCCATAGGC+TGG | 0.535720 | 8.1:-29039156 | None:intergenic |
| AGCTCACCAGCCTATGGAGA+TGG | 0.537937 | 8.1:+29039150 | MS.gene44996:CDS |
| CTGAGGCCTGAAGTTGAAGA+AGG | 0.538408 | 8.1:+29038931 | MS.gene44996:CDS |
| CATGCATCATTTCATGAGCT+AGG | 0.540468 | 8.1:-29038789 | None:intergenic |
| ACCTGTATACAGGCGAAAAG+AGG | 0.540632 | 8.1:-29036536 | None:intergenic |
| TCTTGCAAACATCACACCTT+GGG | 0.542837 | 8.1:-29037160 | None:intergenic |
| TGCTCAAGTATGGGCTTAGA+CGG | 0.544906 | 8.1:+29039196 | MS.gene44996:CDS |
| CATTCAGGACGAGGATACAC+CGG | 0.549451 | 8.1:+29035746 | MS.gene44996:CDS |
| AGAAGGAATATGCCAAGTCT+TGG | 0.551472 | 8.1:+29038948 | MS.gene44996:CDS |
| ACCACATATGAGCCAAGACT+TGG | 0.555232 | 8.1:-29038960 | None:intergenic |
| GCTGATGTTGAACAAAATGA+AGG | 0.556484 | 8.1:+29036357 | MS.gene44996:CDS |
| ATGCCGAGATTGGCCATGGA+AGG | 0.556967 | 8.1:+29036836 | MS.gene44996:CDS |
| ACCAGGCAGTGCTCAAGTAT+GGG | 0.557753 | 8.1:+29039187 | MS.gene44996:CDS |
| ACCCTTCTTTGAAGATGTAG+AGG | 0.559513 | 8.1:-29039067 | None:intergenic |
| TGTGATTGCAGAATCTGTGC+TGG | 0.563652 | 8.1:+29036808 | MS.gene44996:intron |
| TCCTCTACATCTTCAAAGAA+GGG | 0.564606 | 8.1:+29039066 | MS.gene44996:CDS |
| GCCAAGTCTTGGCTCATATG+TGG | 0.565359 | 8.1:+29038959 | MS.gene44996:CDS |
| CTTGACCATATCCGAATGAC+CGG | 0.569122 | 8.1:+29039222 | MS.gene44996:CDS |
| CTCTCTAAATCCATCTCCAT+AGG | 0.573587 | 8.1:-29039160 | None:intergenic |
| ATCTTGCAAACATCACACCT+TGG | 0.577586 | 8.1:-29037161 | None:intergenic |
| TTCTTTGAAGATGTAGAGGA+AGG | 0.578442 | 8.1:-29039063 | None:intergenic |
| TCTTTCAGAGGTTACAGAGG+AGG | 0.581657 | 8.1:+29035964 | MS.gene44996:CDS |
| AAGTATCTGTTGCTTGATGA+CGG | 0.585206 | 8.1:+29037890 | MS.gene44996:CDS |
| TCTTGTATTTCAAGATAGAG+AGG | 0.585747 | 8.1:-29037971 | None:intergenic |
| ATTCAAGAAAGTTTGAGCGT+TGG | 0.587908 | 8.1:+29036465 | MS.gene44996:CDS |
| TGCAATGCCGAGATTGGCCA+TGG | 0.592397 | 8.1:+29036832 | MS.gene44996:CDS |
| GAATCAGTTTGAGACGGAGG+AGG | 0.593085 | 8.1:-29036492 | None:intergenic |
| AATTGCGATCTCTCTTTCAG+AGG | 0.593587 | 8.1:+29035952 | MS.gene44996:CDS |
| TGTCTCTCAACCAAAAGCAT+AGG | 0.601813 | 8.1:-29038034 | None:intergenic |
| ACAAGCACTAAATGAAGCCA+TGG | 0.603423 | 8.1:+29038054 | MS.gene44996:CDS |
| CTCTCTTTCAGAGGTTACAG+AGG | 0.604714 | 8.1:+29035961 | MS.gene44996:CDS |
| AATATAGAATCAGTTTGAGA+CGG | 0.606429 | 8.1:-29036498 | None:intergenic |
| CGACAGGCTATGGGAATCTG+AGG | 0.609358 | 8.1:+29038914 | MS.gene44996:intron |
| AGATTCTGAATCTGAAGATG+AGG | 0.610392 | 8.1:+29036296 | MS.gene44996:CDS |
| ATTCAGGACGAGGATACACC+GGG | 0.612301 | 8.1:+29035747 | MS.gene44996:CDS |
| TCATCTTCCTCGTCATCAAG+TGG | 0.612402 | 8.1:-29036327 | None:intergenic |
| ATAAGGAGCTGCATCACCCA+AGG | 0.612966 | 8.1:+29037144 | MS.gene44996:CDS |
| CTATGGAGATGGATTTAGAG+AGG | 0.615579 | 8.1:+29039161 | MS.gene44996:CDS |
| CTGATGTTGAACAAAATGAA+GGG | 0.615941 | 8.1:+29036358 | MS.gene44996:CDS |
| GTAAGGACGATTCCCAGACA+TGG | 0.624532 | 8.1:-29037108 | None:intergenic |
| GGAAGATGAACAACTTGCCA+GGG | 0.625754 | 8.1:+29036440 | MS.gene44996:CDS |
| CAGTTATCATATCGATGACA+CGG | 0.628026 | 8.1:-29038412 | None:intergenic |
| AACCATAAACATTCAGGACG+AGG | 0.628809 | 8.1:+29035737 | MS.gene44996:CDS |
| TGTTGACGAAGTTCAACTTG+AGG | 0.636560 | 8.1:+29036419 | MS.gene44996:CDS |
| TATGGAGATGGATTTAGAGA+GGG | 0.638780 | 8.1:+29039162 | MS.gene44996:CDS |
| TATCAGAAGGATACCTAGGA+AGG | 0.638978 | 8.1:-29038490 | None:intergenic |
| GGTTACAGAGGAGGTTACAG+AGG | 0.639025 | 8.1:+29035973 | MS.gene44996:CDS |
| GATGTGCTCTATACTCAATG+AGG | 0.649586 | 8.1:-29037655 | None:intergenic |
| ATAGAATCAGTTTGAGACGG+AGG | 0.651123 | 8.1:-29036495 | None:intergenic |
| ACTTCCAATCACTGATTACG+AGG | 0.658587 | 8.1:+29036918 | MS.gene44996:CDS |
| GCACTAAATGAAGCCATGGA+GGG | 0.659884 | 8.1:+29038058 | MS.gene44996:CDS |
| TGTCCATCACACGAGCGCGA+TGG | 0.661781 | 8.1:+29037698 | MS.gene44996:CDS |
| AGCACTAAATGAAGCCATGG+AGG | 0.665183 | 8.1:+29038057 | MS.gene44996:CDS |
| TTGTAGCTGTCAAAGAATGG+AGG | 0.683641 | 8.1:+29037733 | MS.gene44996:CDS |
| GTTGTGTCCACTTGATGACG+AGG | 0.696227 | 8.1:+29036320 | MS.gene44996:CDS |
| CACCATTTACCTGAAACCAG+AGG | 0.704277 | 8.1:+29038226 | MS.gene44996:CDS |
| TGATGTTGAACAAAATGAAG+GGG | 0.704807 | 8.1:+29036359 | MS.gene44996:CDS |
| CTTTGACAGCTACAACAACG+AGG | 0.719508 | 8.1:-29037725 | None:intergenic |
| GGATAATCATGATAATTCCG+CGG | 0.721301 | 8.1:+29035793 | MS.gene44996:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATATTATATAAA+GGG | - | chr8.1:29037594-29037613 | None:intergenic | 0.0% |
| !! | AGTATTATTTACAATAATAT+TGG | - | chr8.1:29037064-29037083 | None:intergenic | 10.0% |
| !! | ATATTATTGTAAATAATACT+TGG | + | chr8.1:29037064-29037083 | MS.gene44996:intron | 10.0% |
| !! | CTAATCAAATATTTATAAAA+TGG | - | chr8.1:29036194-29036213 | None:intergenic | 10.0% |
| !! | TATAAATATTTGATTAGAAA+AGG | + | chr8.1:29036197-29036216 | MS.gene44996:intron | 10.0% |
| !! | AAAGTTTAAATAAGTAGATA+TGG | - | chr8.1:29036988-29037007 | None:intergenic | 15.0% |
| !! | AAGTTTAAATAAGTAGATAT+GGG | - | chr8.1:29036987-29037006 | None:intergenic | 15.0% |
| !! | ATTTCATATCAATTAATGAA+AGG | - | chr8.1:29037842-29037861 | None:intergenic | 15.0% |
| !! | TACTTATTTAAACTTTCTTT+AGG | + | chr8.1:29036992-29037011 | MS.gene44996:intron | 15.0% |
| !!! | ATGTTGAAAATTTTATATTC+CGG | + | chr8.1:29038859-29038878 | MS.gene44996:intron | 15.0% |
| !!! | ATTTTTTCAATATTGATTGT+AGG | + | chr8.1:29038195-29038214 | MS.gene44996:intron | 15.0% |
| !!! | TTCAAGGATTTTATATTTAT+AGG | + | chr8.1:29038749-29038768 | MS.gene44996:intron | 15.0% |
| !!! | TTTTCATAATTACTTTTAGA+AGG | + | chr8.1:29037339-29037358 | MS.gene44996:intron | 15.0% |
| !!! | TTTTTTCAATATTGATTGTA+GGG | + | chr8.1:29038196-29038215 | MS.gene44996:intron | 15.0% |
| !! | ATACATTGAAGAGAAATAAA+AGG | - | chr8.1:29038133-29038152 | None:intergenic | 20.0% |
| !! | TAAGACAAGAAAGAAAAAAA+TGG | - | chr8.1:29038516-29038535 | None:intergenic | 20.0% |
| !! | TCAATATTGAAAAAATCCAA+AGG | - | chr8.1:29038191-29038210 | None:intergenic | 20.0% |
| !! | TTACCATAAATTATGCTATA+AGG | + | chr8.1:29037127-29037146 | MS.gene44996:CDS | 20.0% |
| !! | TTATAGCATAATTTATGGTA+AGG | - | chr8.1:29037128-29037147 | None:intergenic | 20.0% |
| !!! | TTGCTTAGAACATATATTTT+AGG | - | chr8.1:29036116-29036135 | None:intergenic | 20.0% |
| !!! | TTTCTACGATTTTACATATT+AGG | - | chr8.1:29036666-29036685 | None:intergenic | 20.0% |
| !!! | TTTTGTAATTCCAGATTTTA+AGG | + | chr8.1:29038366-29038385 | MS.gene44996:intron | 20.0% |
| ! | AACAGGTATTAGTATGTATT+AGG | + | chr8.1:29037447-29037466 | MS.gene44996:intron | 25.0% |
| ! | AACATGATTGCAATAATCAT+TGG | - | chr8.1:29038602-29038621 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATGGTATCAGA+AGG | - | chr8.1:29038506-29038525 | None:intergenic | 25.0% |
| ! | AATATAGAATCAGTTTGAGA+CGG | - | chr8.1:29036501-29036520 | None:intergenic | 25.0% |
| ! | ATCACTGCATATGATAAAAA+GGG | + | chr8.1:29036629-29036648 | MS.gene44996:intron | 25.0% |
| ! | CATAAAGGGAAAAAAGTTAT+CGG | + | chr8.1:29036001-29036020 | MS.gene44996:CDS | 25.0% |
| ! | GGAATTTCATATTTGTTCAA+TGG | - | chr8.1:29036173-29036192 | None:intergenic | 25.0% |
| ! | TATAGAAATAACCAGTTCTT+AGG | + | chr8.1:29037552-29037571 | MS.gene44996:intron | 25.0% |
| ! | TATATTTATAGGTTACTGAC+AGG | + | chr8.1:29038760-29038779 | MS.gene44996:intron | 25.0% |
| ! | TCTTTAGCAAATTCGATATA+TGG | - | chr8.1:29036610-29036629 | None:intergenic | 25.0% |
| ! | TGATAAAAAGGGAAAATGAT+TGG | + | chr8.1:29036640-29036659 | MS.gene44996:intron | 25.0% |
| ! | TTGTTGAGCATAAAAATAGA+TGG | - | chr8.1:29038700-29038719 | None:intergenic | 25.0% |
| ! | TTTATATTCCGGTATTAAGT+TGG | + | chr8.1:29038870-29038889 | MS.gene44996:intron | 25.0% |
| ! | TTTGTGTAACATTGTTTGAA+TGG | + | chr8.1:29036064-29036083 | MS.gene44996:intron | 25.0% |
| !! | AGTTTCTTTTATAGACAAAC+AGG | + | chr8.1:29037430-29037449 | MS.gene44996:intron | 25.0% |
| !! | ATTGCAATTTAGAATTTGGT+CGG | + | chr8.1:29038560-29038579 | MS.gene44996:intron | 25.0% |
| !! | GAAATACAAGAATTTTACGA+AGG | + | chr8.1:29037983-29038002 | MS.gene44996:CDS | 25.0% |
| !! | GATCATTGCAATTTAGAATT+TGG | + | chr8.1:29038556-29038575 | MS.gene44996:intron | 25.0% |
| !! | TCAAACAATTTGTTCTTAAC+TGG | + | chr8.1:29038638-29038657 | MS.gene44996:intron | 25.0% |
| !!! | CTAAAAAGTTTGCTTTTCAT+AGG | + | chr8.1:29036737-29036756 | MS.gene44996:intron | 25.0% |
| !!! | GAACATATATTTTAGGTATC+CGG | - | chr8.1:29036109-29036128 | None:intergenic | 25.0% |
| !!! | TAATGTTTAGTTCTTTTCAC+AGG | + | chr8.1:29037398-29037417 | MS.gene44996:intron | 25.0% |
| !!! | TTCAACATTGTTTTGATCAT+TGG | - | chr8.1:29038847-29038866 | None:intergenic | 25.0% |
| AAGTAAAACATCCTTACAGT+GGG | - | chr8.1:29038280-29038299 | None:intergenic | 30.0% | |
| ATACTTGCATATGAAATCTG+CGG | + | chr8.1:29038719-29038738 | MS.gene44996:intron | 30.0% | |
| CTGATGTTGAACAAAATGAA+GGG | + | chr8.1:29036358-29036377 | MS.gene44996:CDS | 30.0% | |
| GATCACTGCATATGATAAAA+AGG | + | chr8.1:29036628-29036647 | MS.gene44996:intron | 30.0% | |
| GCTCCTTATAGCATAATTTA+TGG | - | chr8.1:29037133-29037152 | None:intergenic | 30.0% | |
| TCTTGTATTTCAAGATAGAG+AGG | - | chr8.1:29037974-29037993 | None:intergenic | 30.0% | |
| TGAAAACAGATCAAAGTCAA+TGG | - | chr8.1:29037325-29037344 | None:intergenic | 30.0% | |
| TGATGTTGAACAAAATGAAG+GGG | + | chr8.1:29036359-29036378 | MS.gene44996:CDS | 30.0% | |
| TTACAGAGGAAGATCATAAA+GGG | + | chr8.1:29035987-29036006 | MS.gene44996:CDS | 30.0% | |
| TTAGATTCAGAGATCTATTC+CGG | + | chr8.1:29038982-29039001 | MS.gene44996:CDS | 30.0% | |
| ! | AATTAGTGTTTTCTGTGTAC+CGG | + | chr8.1:29036087-29036106 | MS.gene44996:intron | 30.0% |
| ! | AGATTTATGCTTTTGCAAGA+CGG | + | chr8.1:29036026-29036045 | MS.gene44996:intron | 30.0% |
| ! | ATATGATAACTGAGCCTTTT+AGG | + | chr8.1:29038423-29038442 | MS.gene44996:CDS | 30.0% |
| ! | CTTTTTAGATGTCTACTATC+TGG | - | chr8.1:29036725-29036744 | None:intergenic | 30.0% |
| ! | TGCACAGTATTGAAAAATCA+CGG | - | chr8.1:29037501-29037520 | None:intergenic | 30.0% |
| !! | ATTTTAAGGAGACCAAGTAT+AGG | + | chr8.1:29038380-29038399 | MS.gene44996:CDS | 30.0% |
| !!! | AGAAAAGGTTACCTCTTTTT+TGG | + | chr8.1:29036212-29036231 | MS.gene44996:intron | 30.0% |
| !!! | CATTGTTTTGATCATTGGAA+TGG | - | chr8.1:29038842-29038861 | None:intergenic | 30.0% |
| !!! | GAAAAGGTTACCTCTTTTTT+GGG | + | chr8.1:29036213-29036232 | MS.gene44996:intron | 30.0% |
| !!! | TTGCAGTAAACGTTTTTAGT+CGG | - | chr8.1:29036786-29036805 | None:intergenic | 30.0% |
| AAGGCCATACAAAACAAGTA+TGG | - | chr8.1:29038474-29038493 | None:intergenic | 35.0% | |
| ACCAAGTTCCTTCTCAAAAT+CGG | - | chr8.1:29039100-29039119 | None:intergenic | 35.0% | |
| AGATGGTAACTCAAGTGATT+TGG | - | chr8.1:29038683-29038702 | None:intergenic | 35.0% | |
| AGATTCTGAATCTGAAGATG+AGG | + | chr8.1:29036296-29036315 | MS.gene44996:CDS | 35.0% | |
| AGCATAAACTGTTATTACCG+CGG | - | chr8.1:29035813-29035832 | None:intergenic | 35.0% | |
| AGTAAAACATCCTTACAGTG+GGG | - | chr8.1:29038279-29038298 | None:intergenic | 35.0% | |
| ATTCAAGAAAGTTTGAGCGT+TGG | + | chr8.1:29036465-29036484 | MS.gene44996:CDS | 35.0% | |
| ATTTCACTACATTATGTGCG+AGG | + | chr8.1:29037295-29037314 | MS.gene44996:intron | 35.0% | |
| CAAGTAAAACATCCTTACAG+TGG | - | chr8.1:29038281-29038300 | None:intergenic | 35.0% | |
| CAGTTATCATATCGATGACA+CGG | - | chr8.1:29038415-29038434 | None:intergenic | 35.0% | |
| CATATTCCTTCTTCAACTTC+AGG | - | chr8.1:29038940-29038959 | None:intergenic | 35.0% | |
| CATCTTCAAAGAAGGGTAAA+CGG | + | chr8.1:29039073-29039092 | MS.gene44996:CDS | 35.0% | |
| CATTACAGTATTCCATGTCT+GGG | + | chr8.1:29037096-29037115 | MS.gene44996:intron | 35.0% | |
| CCATGTTGCTAAAATTCAAC+AGG | + | chr8.1:29036383-29036402 | MS.gene44996:CDS | 35.0% | |
| GAGATTGTCCAACTTAATAC+CGG | - | chr8.1:29038881-29038900 | None:intergenic | 35.0% | |
| GATTCAGAATCTTCTTCTGA+AGG | - | chr8.1:29036288-29036307 | None:intergenic | 35.0% | |
| GCTGATGTTGAACAAAATGA+AGG | + | chr8.1:29036357-29036376 | MS.gene44996:CDS | 35.0% | |
| GGATAATCATGATAATTCCG+CGG | + | chr8.1:29035793-29035812 | MS.gene44996:CDS | 35.0% | |
| GTATTTCAAGATAGAGAGGT+TGG | - | chr8.1:29037970-29037989 | None:intergenic | 35.0% | |
| GTTACAGAGGAAGATCATAA+AGG | + | chr8.1:29035986-29036005 | MS.gene44996:CDS | 35.0% | |
| TACTTGGTCTCCTTAAAATC+TGG | - | chr8.1:29038379-29038398 | None:intergenic | 35.0% | |
| TAGTGGTAAATTCTGAGTGT+AGG | + | chr8.1:29035889-29035908 | MS.gene44996:intron | 35.0% | |
| TCATTACAGTATTCCATGTC+TGG | + | chr8.1:29037095-29037114 | MS.gene44996:intron | 35.0% | |
| TCCTCTACATCTTCAAAGAA+GGG | + | chr8.1:29039066-29039085 | MS.gene44996:CDS | 35.0% | |
| TGATGTCATAACCTAAGAAC+TGG | - | chr8.1:29037566-29037585 | None:intergenic | 35.0% | |
| TGGCTTACCAAGTTTCTAAA+GGG | + | chr8.1:29035710-29035729 | MS.gene44996:CDS | 35.0% | |
| TTCCTCTACATCTTCAAAGA+AGG | + | chr8.1:29039065-29039084 | MS.gene44996:CDS | 35.0% | |
| TTGTTGTAGCTGTCAAAGAA+TGG | + | chr8.1:29037730-29037749 | MS.gene44996:CDS | 35.0% | |
| TTTGTCAATTCTGTTGTGCT+TGG | + | chr8.1:29037231-29037250 | MS.gene44996:intron | 35.0% | |
| ! | AAGTATCTGTTGCTTGATGA+CGG | + | chr8.1:29037890-29037909 | MS.gene44996:CDS | 35.0% |
| ! | ATCATGTGTTATTGCCAACA+AGG | + | chr8.1:29037782-29037801 | MS.gene44996:intron | 35.0% |
| ! | GACGTTTTTAAACACTTCAC+CGG | - | chr8.1:29036239-29036258 | None:intergenic | 35.0% |
| ! | TATGGAGATGGATTTAGAGA+GGG | + | chr8.1:29039162-29039181 | MS.gene44996:CDS | 35.0% |
| ! | TCTTTCTACTGTCCTGATTT+TGG | + | chr8.1:29038160-29038179 | MS.gene44996:intron | 35.0% |
| ! | TTCTTTGAAGATGTAGAGGA+AGG | - | chr8.1:29039066-29039085 | None:intergenic | 35.0% |
| !! | CAGTATTTTTGTAGCCAGAA+AGG | - | chr8.1:29037680-29037699 | None:intergenic | 35.0% |
| !! | CCTGTTGAATTTTAGCAACA+TGG | - | chr8.1:29036386-29036405 | None:intergenic | 35.0% |
| !! | CTCTTCTGTTTATTTTCGAC+AGG | + | chr8.1:29038898-29038917 | MS.gene44996:intron | 35.0% |
| !! | GTTTATTTTCGACAGGCTAT+GGG | + | chr8.1:29038905-29038924 | MS.gene44996:intron | 35.0% |
| !! | TGTTTATTTTCGACAGGCTA+TGG | + | chr8.1:29038904-29038923 | MS.gene44996:intron | 35.0% |
| !!! | ACAGCCATACTTGTTTTGTA+TGG | + | chr8.1:29038467-29038486 | MS.gene44996:CDS | 35.0% |
| AACCATAAACATTCAGGACG+AGG | + | chr8.1:29035737-29035756 | MS.gene44996:CDS | 40.0% | |
| AACTGAAATAGCCACCTCTA+TGG | + | chr8.1:29036686-29036705 | MS.gene44996:intron | 40.0% | |
| AATCTGCGGTAGATGATTCA+AGG | + | chr8.1:29038733-29038752 | MS.gene44996:intron | 40.0% | |
| AATTGCGATCTCTCTTTCAG+AGG | + | chr8.1:29035952-29035971 | MS.gene44996:CDS | 40.0% | |
| ACAAGCACTAAATGAAGCCA+TGG | + | chr8.1:29038054-29038073 | MS.gene44996:CDS | 40.0% | |
| AGAAGGAATATGCCAAGTCT+TGG | + | chr8.1:29038948-29038967 | MS.gene44996:CDS | 40.0% | |
| AGAGACTGAAGTTGCAATAG+TGG | + | chr8.1:29035872-29035891 | MS.gene44996:intron | 40.0% | |
| AGTATAGAGCACATCCTTTC+TGG | + | chr8.1:29037663-29037682 | MS.gene44996:CDS | 40.0% | |
| ATATGGACACGACAGAGATT+CGG | + | chr8.1:29035772-29035791 | MS.gene44996:CDS | 40.0% | |
| ATCCTCGTCCTGAATGTTTA+TGG | - | chr8.1:29035742-29035761 | None:intergenic | 40.0% | |
| ATCTTGCAAACATCACACCT+TGG | - | chr8.1:29037164-29037183 | None:intergenic | 40.0% | |
| ATGGAAAACTTCCGGTCATT+CGG | - | chr8.1:29039236-29039255 | None:intergenic | 40.0% | |
| ATGGTATCAGAAGGATACCT+AGG | - | chr8.1:29038497-29038516 | None:intergenic | 40.0% | |
| CAAACTTTCTTGAATTGCCC+TGG | - | chr8.1:29036460-29036479 | None:intergenic | 40.0% | |
| CATGCATCATTTCATGAGCT+AGG | - | chr8.1:29038792-29038811 | None:intergenic | 40.0% | |
| CATGCTTGGCTTAGACTTAA+AGG | + | chr8.1:29038808-29038827 | MS.gene44996:CDS | 40.0% | |
| CCAAAGGACAATCCAAAATC+AGG | - | chr8.1:29038175-29038194 | None:intergenic | 40.0% | |
| CTCATGAAATGATGCATGCT+TGG | + | chr8.1:29038794-29038813 | MS.gene44996:CDS | 40.0% | |
| CTCTCTAAATCCATCTCCAT+AGG | - | chr8.1:29039163-29039182 | None:intergenic | 40.0% | |
| CTGGCTTACCAAGTTTCTAA+AGG | + | chr8.1:29035709-29035728 | MS.gene44996:CDS | 40.0% | |
| GATCTATGTTGTCACCATAG+AGG | - | chr8.1:29036703-29036722 | None:intergenic | 40.0% | |
| GATGTGCTCTATACTCAATG+AGG | - | chr8.1:29037658-29037677 | None:intergenic | 40.0% | |
| GCATGGCAACAAAAACATTC+TGG | - | chr8.1:29036892-29036911 | None:intergenic | 40.0% | |
| GGCGAAAAGAGGTTTGTAAA+AGG | - | chr8.1:29036528-29036547 | None:intergenic | 40.0% | |
| GGTTCGAACCATAAACATTC+AGG | + | chr8.1:29035731-29035750 | MS.gene44996:CDS | 40.0% | |
| TATCAGAAGGATACCTAGGA+AGG | - | chr8.1:29038493-29038512 | None:intergenic | 40.0% | |
| TCGCATAGTTACCTGTATAC+AGG | - | chr8.1:29036549-29036568 | None:intergenic | 40.0% | |
| TCTTGCAAACATCACACCTT+GGG | - | chr8.1:29037163-29037182 | None:intergenic | 40.0% | |
| TGATTGGAAGTTTGCAAGCA+TGG | - | chr8.1:29036909-29036928 | None:intergenic | 40.0% | |
| TGCAACTCAAAAACCTTCCA+TGG | - | chr8.1:29036852-29036871 | None:intergenic | 40.0% | |
| TGTCTTAACCGTCTGTTTCA+GGG | + | chr8.1:29038529-29038548 | MS.gene44996:intron | 40.0% | |
| TGTTGACGAAGTTCAACTTG+AGG | + | chr8.1:29036419-29036438 | MS.gene44996:CDS | 40.0% | |
| TTCGTTGTTGAACGCTAACA+TGG | + | chr8.1:29036954-29036973 | MS.gene44996:intron | 40.0% | |
| TTGTAGCTGTCAAAGAATGG+AGG | + | chr8.1:29037733-29037752 | MS.gene44996:CDS | 40.0% | |
| TTGTCTTAACCGTCTGTTTC+AGG | + | chr8.1:29038528-29038547 | MS.gene44996:intron | 40.0% | |
| TTTCCAATCAGTGCAGTCAA+CGG | + | chr8.1:29037862-29037881 | MS.gene44996:intron | 40.0% | |
| ! | ACCCTTCTTTGAAGATGTAG+AGG | - | chr8.1:29039070-29039089 | None:intergenic | 40.0% |
| ! | ACTTCCAATCACTGATTACG+AGG | + | chr8.1:29036918-29036937 | MS.gene44996:CDS | 40.0% |
| ! | ATAGAATCAGTTTGAGACGG+AGG | - | chr8.1:29036498-29036517 | None:intergenic | 40.0% |
| ! | CCTGATTTTGGATTGTCCTT+TGG | + | chr8.1:29038172-29038191 | MS.gene44996:intron | 40.0% |
| ! | CTATGGAGATGGATTTAGAG+AGG | + | chr8.1:29039161-29039180 | MS.gene44996:CDS | 40.0% |
| ! | GCAGCAAATTCCTATGCTTT+TGG | + | chr8.1:29038024-29038043 | MS.gene44996:CDS | 40.0% |
| ! | GTTCGAACCCTTTAGAAACT+TGG | - | chr8.1:29035720-29035739 | None:intergenic | 40.0% |
| ! | TGATGATGCTTCTTCACTTC+CGG | - | chr8.1:29039010-29039029 | None:intergenic | 40.0% |
| ! | TGTCTCTCAACCAAAAGCAT+AGG | - | chr8.1:29038037-29038056 | None:intergenic | 40.0% |
| ! | TTTATGCTTTTGCAAGACGG+TGG | + | chr8.1:29036029-29036048 | MS.gene44996:intron | 40.0% |
| !! | TAAACGGTCCGATTTTGAGA+AGG | + | chr8.1:29039089-29039108 | MS.gene44996:CDS | 40.0% |
| !! | TCCGATTTTGAGAAGGAACT+TGG | + | chr8.1:29039096-29039115 | MS.gene44996:CDS | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr8.1:29038477-29038496 | MS.gene44996:CDS | 40.0% |
| !!! | GGAAGGTTTTTGAGTTGCAT+GGG | + | chr8.1:29036853-29036872 | MS.gene44996:CDS | 40.0% |
| !!! | TGGAAGGTTTTTGAGTTGCA+TGG | + | chr8.1:29036852-29036871 | MS.gene44996:CDS | 40.0% |
| AAACCTTCCATGGCCAATCT+CGG | - | chr8.1:29036842-29036861 | None:intergenic | 45.0% | |
| AACTTCCGGTCATTCGGATA+TGG | - | chr8.1:29039230-29039249 | None:intergenic | 45.0% | |
| ACCACATATGAGCCAAGACT+TGG | - | chr8.1:29038963-29038982 | None:intergenic | 45.0% | |
| ACCTGTATACAGGCGAAAAG+AGG | - | chr8.1:29036539-29036558 | None:intergenic | 45.0% | |
| AGCACTAAATGAAGCCATGG+AGG | + | chr8.1:29038057-29038076 | MS.gene44996:CDS | 45.0% | |
| AGGAAGATGAACAACTTGCC+AGG | + | chr8.1:29036439-29036458 | MS.gene44996:CDS | 45.0% | |
| CACCATTTACCTGAAACCAG+AGG | + | chr8.1:29038226-29038245 | MS.gene44996:CDS | 45.0% | |
| CAGATCCCACAAAATTCAGC+TGG | + | chr8.1:29037632-29037651 | MS.gene44996:intron | 45.0% | |
| CATCGACGTATCAGCCTAAA+AGG | - | chr8.1:29038440-29038459 | None:intergenic | 45.0% | |
| CGAACCTCGTAATCAGTGAT+TGG | - | chr8.1:29036925-29036944 | None:intergenic | 45.0% | |
| CTAAATCCATCTCCATAGGC+TGG | - | chr8.1:29039159-29039178 | None:intergenic | 45.0% | |
| CTATGTTGTCACCATAGAGG+TGG | - | chr8.1:29036700-29036719 | None:intergenic | 45.0% | |
| CTCTCTTTCAGAGGTTACAG+AGG | + | chr8.1:29035961-29035980 | MS.gene44996:CDS | 45.0% | |
| CTTGACCATATCCGAATGAC+CGG | + | chr8.1:29039222-29039241 | MS.gene44996:CDS | 45.0% | |
| CTTTGACAGCTACAACAACG+AGG | - | chr8.1:29037728-29037747 | None:intergenic | 45.0% | |
| GATAGTGAGTGTCTCCTTGT+TGG | - | chr8.1:29037799-29037818 | None:intergenic | 45.0% | |
| GATCATTCCCCTGAAACAGA+CGG | - | chr8.1:29038540-29038559 | None:intergenic | 45.0% | |
| GCACTAAATGAAGCCATGGA+GGG | + | chr8.1:29038058-29038077 | MS.gene44996:CDS | 45.0% | |
| GGAAGATGAACAACTTGCCA+GGG | + | chr8.1:29036440-29036459 | MS.gene44996:CDS | 45.0% | |
| GTCTTAACCGTCTGTTTCAG+GGG | + | chr8.1:29038530-29038549 | MS.gene44996:intron | 45.0% | |
| GTGAGCTATCTGTCTCAATC+TGG | - | chr8.1:29039137-29039156 | None:intergenic | 45.0% | |
| GTGTCTTGAGTGTCTCGATT+CGG | + | chr8.1:29037922-29037941 | MS.gene44996:CDS | 45.0% | |
| TCATCTTCCTCGTCATCAAG+TGG | - | chr8.1:29036330-29036349 | None:intergenic | 45.0% | |
| TCTGTCGTGTCCATATTTCC+CGG | - | chr8.1:29035768-29035787 | None:intergenic | 45.0% | |
| TCTTTCAGAGGTTACAGAGG+AGG | + | chr8.1:29035964-29035983 | MS.gene44996:CDS | 45.0% | |
| TGCTCAAGTATGGGCTTAGA+CGG | + | chr8.1:29039196-29039215 | MS.gene44996:CDS | 45.0% | |
| TGGATTTAGAGAGGGTAACC+AGG | + | chr8.1:29039170-29039189 | MS.gene44996:CDS | 45.0% | |
| TGGTCGGAAAGTAAGTGAAG+TGG | + | chr8.1:29038576-29038595 | MS.gene44996:intron | 45.0% | |
| TGTGATTGCAGAATCTGTGC+TGG | + | chr8.1:29036808-29036827 | MS.gene44996:intron | 45.0% | |
| TTCTGACAAGCAAAGTCCTC+TGG | - | chr8.1:29038245-29038264 | None:intergenic | 45.0% | |
| ! | AAGCAAAGTCCTCTGGTTTC+AGG | - | chr8.1:29038238-29038257 | None:intergenic | 45.0% |
| ! | ACCTCTTTTCGCCTGTATAC+AGG | + | chr8.1:29036535-29036554 | MS.gene44996:CDS | 45.0% |
| ! | ATGAGGCCAGCTGAATTTTG+TGG | - | chr8.1:29037641-29037660 | None:intergenic | 45.0% |
| ! | GTCCTCTGGTTTCAGGTAAA+TGG | - | chr8.1:29038231-29038250 | None:intergenic | 45.0% |
| ! | TACATTCTTTTCGCCCTCCA+TGG | - | chr8.1:29038074-29038093 | None:intergenic | 45.0% |
| ! | TATCCGTTGACTGCACTGAT+TGG | - | chr8.1:29037868-29037887 | None:intergenic | 45.0% |
| ! | TGAGGCCAGCTGAATTTTGT+GGG | - | chr8.1:29037640-29037659 | None:intergenic | 45.0% |
| !! | GTGTCTCGATTCGGCTATTA+TGG | + | chr8.1:29037931-29037950 | MS.gene44996:CDS | 45.0% |
| !!! | AGGTTACCTCTTTTTTGGGC+CGG | + | chr8.1:29036217-29036236 | MS.gene44996:intron | 45.0% |
| !! | GATATTAATATATTATATAA+AGG | - | chr8.1:29037595-29037614 | None:intergenic | 5.0% |
| !! | TATTAATATATTATATAAAG+GGG | - | chr8.1:29037593-29037612 | None:intergenic | 5.0% |
| AACCAGGCAGTGCTCAAGTA+TGG | + | chr8.1:29039186-29039205 | MS.gene44996:CDS | 50.0% | |
| ACAGATAGCTCACCAGCCTA+TGG | + | chr8.1:29039144-29039163 | MS.gene44996:CDS | 50.0% | |
| ACCAGGCAGTGCTCAAGTAT+GGG | + | chr8.1:29039187-29039206 | MS.gene44996:CDS | 50.0% | |
| ACTTCACCGGCCCAAAAAAG+AGG | - | chr8.1:29036226-29036245 | None:intergenic | 50.0% | |
| AGCAAACTGTCCCCACTGTA+AGG | + | chr8.1:29038266-29038285 | MS.gene44996:intron | 50.0% | |
| AGGAGACCAAGTATAGGAGC+AGG | + | chr8.1:29038386-29038405 | MS.gene44996:CDS | 50.0% | |
| ATAAGGAGCTGCATCACCCA+AGG | + | chr8.1:29037144-29037163 | MS.gene44996:CDS | 50.0% | |
| ATTCAGGACGAGGATACACC+GGG | + | chr8.1:29035747-29035766 | MS.gene44996:CDS | 50.0% | |
| CATTCAGGACGAGGATACAC+CGG | + | chr8.1:29035746-29035765 | MS.gene44996:CDS | 50.0% | |
| CGAGGATACACCGGGAAATA+TGG | + | chr8.1:29035755-29035774 | MS.gene44996:CDS | 50.0% | |
| CTGAGGCCTGAAGTTGAAGA+AGG | + | chr8.1:29038931-29038950 | MS.gene44996:CDS | 50.0% | |
| GCCAAGTCTTGGCTCATATG+TGG | + | chr8.1:29038959-29038978 | MS.gene44996:CDS | 50.0% | |
| GGTTACAGAGGAGGTTACAG+AGG | + | chr8.1:29035973-29035992 | MS.gene44996:CDS | 50.0% | |
| GTAAGGACGATTCCCAGACA+TGG | - | chr8.1:29037111-29037130 | None:intergenic | 50.0% | |
| TCAGAGATCTATTCCGGCTC+CGG | + | chr8.1:29038988-29039007 | MS.gene44996:CDS | 50.0% | |
| TGAGTTGCATGGGAGCTGTA+TGG | + | chr8.1:29036863-29036882 | MS.gene44996:CDS | 50.0% | |
| ! | GAATCAGTTTGAGACGGAGG+AGG | - | chr8.1:29036495-29036514 | None:intergenic | 50.0% |
| !! | GTTGTGTCCACTTGATGACG+AGG | + | chr8.1:29036320-29036339 | MS.gene44996:CDS | 50.0% |
| AGCTCACCAGCCTATGGAGA+TGG | + | chr8.1:29039150-29039169 | MS.gene44996:CDS | 55.0% | |
| CGACAGGCTATGGGAATCTG+AGG | + | chr8.1:29038914-29038933 | MS.gene44996:intron | 55.0% | |
| CGGTAGCCTGCTCCTATACT+TGG | - | chr8.1:29038395-29038414 | None:intergenic | 55.0% | |
| TGCTTCTTCACTTCCGGAGC+CGG | - | chr8.1:29039004-29039023 | None:intergenic | 55.0% | |
| ! | ATGCCGAGATTGGCCATGGA+AGG | + | chr8.1:29036836-29036855 | MS.gene44996:CDS | 55.0% |
| ! | TGCAATGCCGAGATTGGCCA+TGG | + | chr8.1:29036832-29036851 | MS.gene44996:CDS | 55.0% |
| GCTGGCTGCAATGCCGAGAT+TGG | + | chr8.1:29036826-29036845 | MS.gene44996:CDS | 60.0% | |
| TGTCCATCACACGAGCGCGA+TGG | + | chr8.1:29037698-29037717 | MS.gene44996:CDS | 60.0% | |
| ! | GCCCATACTTGAGCACTGCC+TGG | - | chr8.1:29039191-29039210 | None:intergenic | 60.0% |
| GTGCCATCGCGCTCGTGTGA+TGG | - | chr8.1:29037704-29037723 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 29035704 | 29039257 | 29035704 | ID=MS.gene44996 |
| chr8.1 | mRNA | 29035704 | 29039257 | 29035704 | ID=MS.gene44996.t1;Parent=MS.gene44996 |
| chr8.1 | exon | 29035704 | 29035814 | 29035704 | ID=MS.gene44996.t1.exon1;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29035704 | 29035814 | 29035704 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29035911 | 29036022 | 29035911 | ID=MS.gene44996.t1.exon2;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29035911 | 29036022 | 29035911 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29036292 | 29036556 | 29036292 | ID=MS.gene44996.t1.exon3;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29036292 | 29036556 | 29036292 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29036819 | 29036939 | 29036819 | ID=MS.gene44996.t1.exon4;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29036819 | 29036939 | 29036819 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29037104 | 29037187 | 29037104 | ID=MS.gene44996.t1.exon5;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29037104 | 29037187 | 29037104 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29037635 | 29037754 | 29037635 | ID=MS.gene44996.t1.exon6;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29037635 | 29037754 | 29037635 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29037878 | 29038090 | 29037878 | ID=MS.gene44996.t1.exon7;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29037878 | 29038090 | 29037878 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29038217 | 29038282 | 29038217 | ID=MS.gene44996.t1.exon8;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29038217 | 29038282 | 29038217 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29038380 | 29038498 | 29038380 | ID=MS.gene44996.t1.exon9;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29038380 | 29038498 | 29038380 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29038771 | 29038829 | 29038771 | ID=MS.gene44996.t1.exon10;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29038771 | 29038829 | 29038771 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| chr8.1 | exon | 29038920 | 29039257 | 29038920 | ID=MS.gene44996.t1.exon11;Parent=MS.gene44996.t1 |
| chr8.1 | CDS | 29038920 | 29039257 | 29038920 | ID=cds.MS.gene44996.t1;Parent=MS.gene44996.t1 |
| Gene Sequence |
| Protein sequence |
