Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44998.t1 | XP_024628545.1 | 98.2 | 452 | 3 | 1 | 1 | 447 | 1 | 452 | 8.10E-248 | 865.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44998.t1 | Q9LX65 | 76.9 | 451 | 88 | 2 | 1 | 446 | 1 | 440 | 1.8e-195 | 683.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44998.t1 | A0A396GM22 | 97.8 | 453 | 4 | 1 | 1 | 447 | 1 | 453 | 4.9e-247 | 862.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44998 | MS.gene053216 | PPI |
| MS.gene072752 | MS.gene44998 | PPI |
| MS.gene44998 | MS.gene21642 | PPI |
| MS.gene34307 | MS.gene44998 | PPI |
| MS.gene91075 | MS.gene44998 | PPI |
| MS.gene048900 | MS.gene44998 | PPI |
| MS.gene024661 | MS.gene44998 | PPI |
| MS.gene44998 | MS.gene06042 | PPI |
| MS.gene44998 | MS.gene22330 | PPI |
| MS.gene44998 | MS.gene034283 | PPI |
| MS.gene44998 | MS.gene034241 | PPI |
| MS.gene000619 | MS.gene44998 | PPI |
| MS.gene44998 | MS.gene98140 | PPI |
| MS.gene55771 | MS.gene44998 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44998.t1 | MTR_8g078370 | 91.152 | 486 | 4 | 1 | 1 | 447 | 1 | 486 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44998.t1 | AT3G42050 | 76.940 | 451 | 88 | 2 | 1 | 446 | 1 | 440 | 0.0 | 715 |
Find 96 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGTCCTATTAACAATTT+TGG | 0.135845 | 8.1:+29069722 | MS.gene44998:CDS |
| TGAGCCTGCAATTGAATATT+TGG | 0.152768 | 8.1:+29068010 | MS.gene44998:CDS |
| TCACCCGTTCCTTGGCTTTA+AGG | 0.180102 | 8.1:-29069839 | None:intergenic |
| CTTTGGCAGCGAACCCTAAA+AGG | 0.193917 | 8.1:+29065131 | MS.gene44998:intron |
| GAAATCATGCTCTTCAAAAT+TGG | 0.212649 | 8.1:-29069317 | None:intergenic |
| TTCATGTGTTGCAGATTCTA+AGG | 0.279693 | 8.1:+29069703 | MS.gene44998:intron |
| ACGAGTCCAAAATTGTTAAT+AGG | 0.288657 | 8.1:-29069728 | None:intergenic |
| ACATCATCAATACTGGTAAA+TGG | 0.305918 | 8.1:-29066494 | None:intergenic |
| AGATCCTTGCCTTAATAGTT+AGG | 0.340589 | 8.1:+29066295 | MS.gene44998:CDS |
| AGATACTGTGGAGTATGTTT+TGG | 0.345588 | 8.1:+29064997 | MS.gene44998:CDS |
| AACCTGATCGGTGGTTAATT+CGG | 0.348733 | 8.1:-29064510 | None:intergenic |
| TTGCCTTTCAACTCTACTTA+AGG | 0.349983 | 8.1:+29067582 | MS.gene44998:CDS |
| ATGAAACAAGTCTCTGCATT+TGG | 0.354572 | 8.1:+29067973 | MS.gene44998:CDS |
| TGCACAAAGATCCCATCTTT+TGG | 0.361790 | 8.1:+29069281 | MS.gene44998:CDS |
| AGAAGTTCTTCTCGGCAATC+TGG | 0.364797 | 8.1:+29069246 | MS.gene44998:CDS |
| TTCATCCAGTGCCATCCGGC+TGG | 0.367544 | 8.1:+29069798 | MS.gene44998:CDS |
| GACTGCTTCGGAAAGGAAAC+TGG | 0.368536 | 8.1:+29066250 | MS.gene44998:intron |
| AAAGTATGCAAGCTTCTTGC+AGG | 0.371219 | 8.1:+29069938 | MS.gene44998:CDS |
| TTGAATATTTGGCTACTTCA+AGG | 0.384243 | 8.1:+29068021 | MS.gene44998:CDS |
| TTTGTATTACCTAACTATTA+AGG | 0.390901 | 8.1:-29066304 | None:intergenic |
| AATCAAAACATCATCAATAC+TGG | 0.405259 | 8.1:-29066501 | None:intergenic |
| AGCTAGAGTCCTTGGATCAT+TGG | 0.405799 | 8.1:-29069751 | None:intergenic |
| GTAGCCAAATATTCAATTGC+AGG | 0.408085 | 8.1:-29068014 | None:intergenic |
| GGTAAAATGGCTTTGTGAGC+AGG | 0.413777 | 8.1:+29066529 | MS.gene44998:CDS |
| CTCTCTGGAAGAAGGGCTTA+AGG | 0.434534 | 8.1:+29069183 | MS.gene44998:CDS |
| CAGAGTGGCGTTGCTTCAAA+TGG | 0.436370 | 8.1:+29066449 | MS.gene44998:CDS |
| TTCTTCTCGGCAATCTGGAT+TGG | 0.439850 | 8.1:+29069251 | MS.gene44998:CDS |
| CGTAACGGCGCAAGAGTTGA+AGG | 0.444536 | 8.1:-29064748 | None:intergenic |
| TCCGCCCAGCCGGATGGCAC+TGG | 0.445744 | 8.1:-29069803 | None:intergenic |
| TACAAGCAAGAAGTTCTTCT+CGG | 0.448235 | 8.1:+29069238 | MS.gene44998:CDS |
| CAAGCAACAGCTAGAGTCCT+TGG | 0.449302 | 8.1:-29069759 | None:intergenic |
| GTTGGAGGCACTGAACTCTC+TGG | 0.462163 | 8.1:+29069168 | MS.gene44998:CDS |
| TTGATGTCAAAAGGGACATT+GGG | 0.464953 | 8.1:+29068305 | MS.gene44998:CDS |
| CTTGATGTCAAAAGGGACAT+TGG | 0.466332 | 8.1:+29068304 | MS.gene44998:CDS |
| ATCCACTCAACAATCTATTC+AGG | 0.466562 | 8.1:+29067675 | MS.gene44998:CDS |
| TCGTACTTTGTTCAAACTGA+TGG | 0.468044 | 8.1:+29067619 | MS.gene44998:CDS |
| GAAAGGCAATTGATAGCAGT+TGG | 0.470551 | 8.1:-29067568 | None:intergenic |
| TAGTTTCATCACCCGTTCCT+TGG | 0.471725 | 8.1:-29069847 | None:intergenic |
| GATTGTGTGGCAGGATGGTC+CGG | 0.472350 | 8.1:+29064928 | MS.gene44998:intron |
| TAAGAGTTCTACAAAAGAAA+AGG | 0.474052 | 8.1:+29068070 | MS.gene44998:CDS |
| GATAAGCTTGGTGGACATGT+AGG | 0.480468 | 8.1:-29064714 | None:intergenic |
| TACTTAAGGAACCTGTGGTC+AGG | 0.484763 | 8.1:+29067596 | MS.gene44998:CDS |
| GTGGACATGTAGGTTTCCCA+TGG | 0.486337 | 8.1:-29064704 | None:intergenic |
| ATGTCCACCAAGCTTATCTC+TGG | 0.487261 | 8.1:+29064719 | MS.gene44998:CDS |
| AGGGACATTGGGTGCTCAGA+TGG | 0.492699 | 8.1:+29068316 | MS.gene44998:CDS |
| CATCAAGTAACTGTGCTCTC+TGG | 0.494640 | 8.1:-29064787 | None:intergenic |
| TTAACAACATCAATCAGTCT+TGG | 0.496128 | 8.1:-29068050 | None:intergenic |
| TCATGTGTTGCAGATTCTAA+GGG | 0.497992 | 8.1:+29069704 | MS.gene44998:intron |
| CGTACTTTGTTCAAACTGAT+GGG | 0.502271 | 8.1:+29067620 | MS.gene44998:CDS |
| TGACCTTAAAGCCAAGGAAC+GGG | 0.504993 | 8.1:+29069836 | MS.gene44998:CDS |
| GCACTGAACTCTCTGGAAGA+AGG | 0.505091 | 8.1:+29069175 | MS.gene44998:CDS |
| TCATCCAGTGCCATCCGGCT+GGG | 0.508926 | 8.1:+29069799 | MS.gene44998:CDS |
| ACAGTTCATCCAGTGCCATC+CGG | 0.510383 | 8.1:+29069794 | MS.gene44998:CDS |
| GTCACAATGATCCGCCCAGC+CGG | 0.514567 | 8.1:-29069813 | None:intergenic |
| TTCAAACTTTGAACAACTTG+TGG | 0.515858 | 8.1:-29068353 | None:intergenic |
| AGCCGAATTAACCACCGATC+AGG | 0.518255 | 8.1:+29064508 | MS.gene44998:CDS |
| GCAGTTGGAACTCCACGACT+TGG | 0.537420 | 8.1:-29067553 | None:intergenic |
| GATCGGTGGTTAATTCGGCT+TGG | 0.538244 | 8.1:-29064505 | None:intergenic |
| AAAGTTTGAAAGCACAAGCA+TGG | 0.539296 | 8.1:+29068366 | MS.gene44998:CDS |
| CAACATCAATCAGTCTTGGA+AGG | 0.542110 | 8.1:-29068046 | None:intergenic |
| CACTGAACTCTCTGGAAGAA+GGG | 0.545338 | 8.1:+29069176 | MS.gene44998:CDS |
| TTTGGCAGCGAACCCTAAAA+GGG | 0.545638 | 8.1:+29065132 | MS.gene44998:intron |
| TTCTGAGCAGGGATATCCCA+TGG | 0.555770 | 8.1:+29064687 | MS.gene44998:CDS |
| ATAGATTGTTGAGTGGATGC+TGG | 0.556132 | 8.1:-29067670 | None:intergenic |
| CAATGATCCGCCCAGCCGGA+TGG | 0.559951 | 8.1:-29069809 | None:intergenic |
| ACAAACACGCGAACATAAGC+CGG | 0.563310 | 8.1:-29064947 | None:intergenic |
| AAAGATGGGATCTTTGTGCA+TGG | 0.563821 | 8.1:-29069278 | None:intergenic |
| GTTCCTTAAGTAGAGTTGAA+AGG | 0.566263 | 8.1:-29067585 | None:intergenic |
| CGGATCGGAACGAACCTGAT+CGG | 0.567280 | 8.1:-29064522 | None:intergenic |
| TGTTCCAGAGATAAGCTTGG+TGG | 0.570170 | 8.1:-29064723 | None:intergenic |
| TTTCTGGAAGGTTCTGAGCA+GGG | 0.571661 | 8.1:+29064676 | MS.gene44998:intron |
| AACTCTACTTAAGGAACCTG+TGG | 0.573470 | 8.1:+29067591 | MS.gene44998:CDS |
| GTAAATACTTAACTTAGGAA+AGG | 0.579235 | 8.1:-29065202 | None:intergenic |
| ATGATAGATGAAATGCTGAC+AGG | 0.587203 | 8.1:+29065022 | MS.gene44998:CDS |
| TTGCACCCAAGAAAAGTCGT+TGG | 0.588611 | 8.1:-29069917 | None:intergenic |
| ACTCCACGACTTGGATGAGA+AGG | 0.588701 | 8.1:-29067544 | None:intergenic |
| TGGACTCGTCCAATGATCCA+AGG | 0.596481 | 8.1:+29069742 | MS.gene44998:CDS |
| AACATCAATCAGTCTTGGAA+GGG | 0.598970 | 8.1:-29068045 | None:intergenic |
| GCTTGTTCCAGAGATAAGCT+TGG | 0.600940 | 8.1:-29064726 | None:intergenic |
| AAGATGGGATCTTTGTGCAT+GGG | 0.601062 | 8.1:-29069277 | None:intergenic |
| GTGGATGCTGGACAAATCAA+TGG | 0.605600 | 8.1:-29067658 | None:intergenic |
| ATTACCTAACTATTAAGGCA+AGG | 0.608709 | 8.1:-29066299 | None:intergenic |
| GTTTCATGACAATGCTCTCG+CGG | 0.609258 | 8.1:+29065162 | MS.gene44998:CDS |
| TCCAGTGCCATCCGGCTGGG+CGG | 0.612825 | 8.1:+29069802 | MS.gene44998:CDS |
| AAGCCTTCTCATCCAAGTCG+TGG | 0.615465 | 8.1:+29067541 | MS.gene44998:CDS |
| TGGACATGTAGGTTTCCCAT+GGG | 0.621215 | 8.1:-29064703 | None:intergenic |
| CTGACCTTAAAGCCAAGGAA+CGG | 0.626093 | 8.1:+29069835 | MS.gene44998:CDS |
| ACAAAGTACGACCTGACCAC+AGG | 0.637592 | 8.1:-29067607 | None:intergenic |
| TGTGACTGACCTTAAAGCCA+AGG | 0.638812 | 8.1:+29069830 | MS.gene44998:CDS |
| GTACTTTGTTCAAACTGATG+GGG | 0.648822 | 8.1:+29067621 | MS.gene44998:CDS |
| TCTGAGCAGGGATATCCCAT+GGG | 0.668404 | 8.1:+29064688 | MS.gene44998:CDS |
| TTTCTGATCTATGATCGTAA+CGG | 0.670590 | 8.1:-29064763 | None:intergenic |
| ATCGGAACGAACCTGATCGG+TGG | 0.686459 | 8.1:-29064519 | None:intergenic |
| TACCTGAATAGATTGTTGAG+TGG | 0.689400 | 8.1:-29067677 | None:intergenic |
| AATGAATCATGAGAGTGCCG+AGG | 0.694038 | 8.1:+29069869 | MS.gene44998:CDS |
| AGCACAAGCATGGAGTGATG+AGG | 0.723682 | 8.1:+29068376 | MS.gene44998:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAAAAATTGTT+TGG | - | chr8.1:29067181-29067200 | None:intergenic | 10.0% |
| !! | ATATTGTATTAGTATATATA+AGG | + | chr8.1:29066029-29066048 | MS.gene44998:intron | 10.0% |
| !! | TATTGTATTAGTATATATAA+GGG | + | chr8.1:29066030-29066049 | MS.gene44998:intron | 10.0% |
| !! | TTTCTAATTAATAGAAAATT+CGG | - | chr8.1:29069132-29069151 | None:intergenic | 10.0% |
| !!! | AATTTTTGAATTATTATCTT+TGG | + | chr8.1:29065114-29065133 | MS.gene44998:intron | 10.0% |
| !!! | ATTAATTATTTACTTTTCTT+CGG | + | chr8.1:29065249-29065268 | MS.gene44998:intron | 10.0% |
| !! | AAAATCTTATGAACTAAATA+TGG | - | chr8.1:29067401-29067420 | None:intergenic | 15.0% |
| !! | AAATGTCATAAAACTATAAT+AGG | + | chr8.1:29068440-29068459 | MS.gene44998:intron | 15.0% |
| !! | ATAAAATCGAAAAAATTGAA+AGG | - | chr8.1:29064601-29064620 | None:intergenic | 15.0% |
| !! | ATACTCTTAATATAATAACA+AGG | - | chr8.1:29065909-29065928 | None:intergenic | 15.0% |
| !! | CAATATCAACTTATATTATT+TGG | + | chr8.1:29065628-29065647 | MS.gene44998:intron | 15.0% |
| !! | TAAAATCGAAAAAATTGAAA+GGG | - | chr8.1:29064600-29064619 | None:intergenic | 15.0% |
| !! | TATGAAATTACAAAGAAAAA+TGG | - | chr8.1:29069380-29069399 | None:intergenic | 15.0% |
| !! | TTCTAATTAATAGAAAATTC+GGG | - | chr8.1:29069131-29069150 | None:intergenic | 15.0% |
| !! | TTGTTTATATTTCATAACTT+TGG | - | chr8.1:29066201-29066220 | None:intergenic | 15.0% |
| !!! | ATATTTTGTAGAATTGTTTT+TGG | + | chr8.1:29066826-29066845 | MS.gene44998:intron | 15.0% |
| !!! | ATTCAGAATTTTCATATTTT+CGG | - | chr8.1:29067721-29067740 | None:intergenic | 15.0% |
| !!! | CAATAGTTATAATTTTATGA+TGG | + | chr8.1:29068177-29068196 | MS.gene44998:intron | 15.0% |
| !!! | CATTTATTTGTTAGTATAAT+AGG | + | chr8.1:29065999-29066018 | MS.gene44998:intron | 15.0% |
| !!! | TTAATTAGAAAAGTTTTCAT+AGG | + | chr8.1:29069141-29069160 | MS.gene44998:intron | 15.0% |
| !! | ACAAAACAAAAACAAATTCA+GGG | - | chr8.1:29065227-29065246 | None:intergenic | 20.0% |
| !! | ATAAAATTATAACTATTGCC+AGG | - | chr8.1:29068175-29068194 | None:intergenic | 20.0% |
| !! | TAATAGAAAAAGGAAAATCA+AGG | + | chr8.1:29068608-29068627 | MS.gene44998:intron | 20.0% |
| !! | TACAAAACAAAAACAAATTC+AGG | - | chr8.1:29065228-29065247 | None:intergenic | 20.0% |
| !! | TTAAAAACTTGATGTCAAAA+GGG | + | chr8.1:29068297-29068316 | MS.gene44998:CDS | 20.0% |
| !! | TTTGTATTACCTAACTATTA+AGG | - | chr8.1:29066307-29066326 | None:intergenic | 20.0% |
| !!! | GTTAGCATTTTAATAGAAAA+AGG | + | chr8.1:29068598-29068617 | MS.gene44998:intron | 20.0% |
| !!! | TATAGTTGATGTTAATATGA+AGG | - | chr8.1:29066143-29066162 | None:intergenic | 20.0% |
| !!! | TTCAGAATTTTCATATTTTC+GGG | - | chr8.1:29067720-29067739 | None:intergenic | 20.0% |
| ! | AAAAAAGAGAAAACTGAAAC+TGG | - | chr8.1:29066912-29066931 | None:intergenic | 25.0% |
| ! | AAAAATGAGACGAACATAAA+TGG | - | chr8.1:29068111-29068130 | None:intergenic | 25.0% |
| ! | AAAACAAGCAAGATAATACA+TGG | - | chr8.1:29068776-29068795 | None:intergenic | 25.0% |
| ! | AAAACTTCGAATTGTGAATA+TGG | - | chr8.1:29066105-29066124 | None:intergenic | 25.0% |
| ! | AATCAAAACATCATCAATAC+TGG | - | chr8.1:29066504-29066523 | None:intergenic | 25.0% |
| ! | ACTCTTATACTGCATATAAT+TGG | - | chr8.1:29067280-29067299 | None:intergenic | 25.0% |
| ! | AGTATATTAGATTATCTCAC+AGG | + | chr8.1:29065924-29065943 | MS.gene44998:intron | 25.0% |
| ! | ATATTGTTCCAGATGTAATA+TGG | + | chr8.1:29065593-29065612 | MS.gene44998:intron | 25.0% |
| ! | ATGCATATCAAAACAATAGA+AGG | - | chr8.1:29068818-29068837 | None:intergenic | 25.0% |
| ! | CTCTTATACTGCATATAATT+GGG | - | chr8.1:29067279-29067298 | None:intergenic | 25.0% |
| ! | CTTAAAAACTTGATGTCAAA+AGG | + | chr8.1:29068296-29068315 | MS.gene44998:CDS | 25.0% |
| ! | GATATGTAAATGTCTTTGAT+AGG | + | chr8.1:29066649-29066668 | MS.gene44998:intron | 25.0% |
| ! | GTAAATACTTAACTTAGGAA+AGG | - | chr8.1:29065205-29065224 | None:intergenic | 25.0% |
| ! | TAACAAAATTGGCAAAAGAA+TGG | - | chr8.1:29068251-29068270 | None:intergenic | 25.0% |
| ! | TAAGAGTTCTACAAAAGAAA+AGG | + | chr8.1:29068070-29068089 | MS.gene44998:CDS | 25.0% |
| ! | TAGATTTGAATTTGATTGTG+TGG | + | chr8.1:29064915-29064934 | MS.gene44998:intron | 25.0% |
| ! | TATATGATGACTTGAAAATG+TGG | + | chr8.1:29068708-29068727 | MS.gene44998:intron | 25.0% |
| ! | TCTCAATTAGAAAACAGTTT+CGG | - | chr8.1:29067155-29067174 | None:intergenic | 25.0% |
| ! | TCTTATACTGCATATAATTG+GGG | - | chr8.1:29067278-29067297 | None:intergenic | 25.0% |
| ! | TTCGAATAGAAATTAGCATT+AGG | - | chr8.1:29067874-29067893 | None:intergenic | 25.0% |
| ! | TTGTTAATTTCATTGCCAAA+TGG | - | chr8.1:29069593-29069612 | None:intergenic | 25.0% |
| ! | TTTACTAACATATGTTGTTC+AGG | + | chr8.1:29068130-29068149 | MS.gene44998:intron | 25.0% |
| ! | TTTATCTCTATTCAATCATC+TGG | + | chr8.1:29069069-29069088 | MS.gene44998:intron | 25.0% |
| !! | AAAGTTTTCATAGGATTTGT+TGG | + | chr8.1:29069150-29069169 | MS.gene44998:intron | 25.0% |
| !! | AGTTGATATTGAAAATCAGT+AGG | - | chr8.1:29065619-29065638 | None:intergenic | 25.0% |
| !! | ATTCTTTTGCCAATTTTGTT+AGG | + | chr8.1:29068250-29068269 | MS.gene44998:intron | 25.0% |
| !! | GATATTGTGTAATTGTTTTC+TGG | + | chr8.1:29064660-29064679 | MS.gene44998:intron | 25.0% |
| !! | GTTATAATTTTATGATGGCT+AGG | + | chr8.1:29068182-29068201 | MS.gene44998:intron | 25.0% |
| !! | TCAGAATTTTCATATTTTCG+GGG | - | chr8.1:29067719-29067738 | None:intergenic | 25.0% |
| !!! | AGGTAATTTGTTGGATAAAA+AGG | + | chr8.1:29065042-29065061 | MS.gene44998:intron | 25.0% |
| !!! | AGTATTGATGATGTTTTGAT+TGG | + | chr8.1:29066503-29066522 | MS.gene44998:CDS | 25.0% |
| !!! | ATTTTGATTCGAAGTAGATT+TGG | + | chr8.1:29064834-29064853 | MS.gene44998:intron | 25.0% |
| !!! | CTGAGTATTTATGATTTGTT+GGG | + | chr8.1:29067914-29067933 | MS.gene44998:intron | 25.0% |
| !!! | GATAATTTTGGTGTTGTAAT+TGG | + | chr8.1:29066605-29066624 | MS.gene44998:intron | 25.0% |
| !!! | GGTAATTTGTTGGATAAAAA+GGG | + | chr8.1:29065043-29065062 | MS.gene44998:intron | 25.0% |
| !!! | GTAATTTGTTGGATAAAAAG+GGG | + | chr8.1:29065044-29065063 | MS.gene44998:intron | 25.0% |
| !!! | TAATTTGTTGGATAAAAAGG+GGG | + | chr8.1:29065045-29065064 | MS.gene44998:intron | 25.0% |
| !!! | TATGATTTGTTTGTTGTTAG+TGG | + | chr8.1:29065079-29065098 | MS.gene44998:intron | 25.0% |
| !!! | TATGGCATTTTAGTTTCAAA+TGG | + | chr8.1:29066337-29066356 | MS.gene44998:intron | 25.0% |
| !!! | TTTTGATTGGATTGGTAAAA+TGG | + | chr8.1:29066516-29066535 | MS.gene44998:CDS | 25.0% |
| AAAATGTGGTCTGATGAAAT+TGG | + | chr8.1:29068722-29068741 | MS.gene44998:intron | 30.0% | |
| AAGAGCCACTAAATAAAAAC+TGG | - | chr8.1:29065406-29065425 | None:intergenic | 30.0% | |
| AATACAAACACGAGTCATTA+TGG | + | chr8.1:29066319-29066338 | MS.gene44998:intron | 30.0% | |
| ACAAAGAAAAATGGAATCAC+AGG | - | chr8.1:29069371-29069390 | None:intergenic | 30.0% | |
| ACATCATCAATACTGGTAAA+TGG | - | chr8.1:29066497-29066516 | None:intergenic | 30.0% | |
| ACGAGTCCAAAATTGTTAAT+AGG | - | chr8.1:29069731-29069750 | None:intergenic | 30.0% | |
| AGAAAAGTAAGTTGTAACTC+TGG | + | chr8.1:29069406-29069425 | MS.gene44998:intron | 30.0% | |
| AGAAATTCCGTTCTTCATAA+TGG | - | chr8.1:29069044-29069063 | None:intergenic | 30.0% | |
| ATCGAAGAAATGAGAAGAAT+CGG | - | chr8.1:29064545-29064564 | None:intergenic | 30.0% | |
| ATCTATTCAGGTAAGATTAC+CGG | + | chr8.1:29067687-29067706 | MS.gene44998:intron | 30.0% | |
| ATTACCTAACTATTAAGGCA+AGG | - | chr8.1:29066302-29066321 | None:intergenic | 30.0% | |
| ATTATGAAGAACGGAATTTC+TGG | + | chr8.1:29069043-29069062 | MS.gene44998:intron | 30.0% | |
| CAATAGAAGGAAACAAATTG+TGG | - | chr8.1:29068805-29068824 | None:intergenic | 30.0% | |
| CATCCAATTGTAAGGATATA+TGG | - | chr8.1:29065340-29065359 | None:intergenic | 30.0% | |
| CCAACAAATCATAAATACTC+AGG | - | chr8.1:29067916-29067935 | None:intergenic | 30.0% | |
| CTCTAACAACCTAACAAAAT+TGG | - | chr8.1:29068262-29068281 | None:intergenic | 30.0% | |
| GAAAAGTAAGTTGTAACTCT+GGG | + | chr8.1:29069407-29069426 | MS.gene44998:intron | 30.0% | |
| GAAATCATGCTCTTCAAAAT+TGG | - | chr8.1:29069320-29069339 | None:intergenic | 30.0% | |
| GAAATTCCGTTCTTCATAAT+GGG | - | chr8.1:29069043-29069062 | None:intergenic | 30.0% | |
| GAATTGGCAATGTTCATTAA+TGG | + | chr8.1:29066964-29066983 | MS.gene44998:intron | 30.0% | |
| GATAGATTTCTTAAGCAAGA+GGG | - | chr8.1:29069485-29069504 | None:intergenic | 30.0% | |
| GCTCAAAATATTTCTTTCAG+AGG | - | chr8.1:29066687-29066706 | None:intergenic | 30.0% | |
| TAACTATTGCCAGGAAAAAA+AGG | - | chr8.1:29068166-29068185 | None:intergenic | 30.0% | |
| TATGTATAAGAAGAGCCATT+TGG | + | chr8.1:29069575-29069594 | MS.gene44998:intron | 30.0% | |
| TCAGGGTAAATACTTAACTT+AGG | - | chr8.1:29065210-29065229 | None:intergenic | 30.0% | |
| TGATAGATTTCTTAAGCAAG+AGG | - | chr8.1:29069486-29069505 | None:intergenic | 30.0% | |
| TTAACAACATCAATCAGTCT+TGG | - | chr8.1:29068053-29068072 | None:intergenic | 30.0% | |
| TTATTGCATGCAGTAATAGA+TGG | + | chr8.1:29067820-29067839 | MS.gene44998:intron | 30.0% | |
| TTCAAACTTTGAACAACTTG+TGG | - | chr8.1:29068356-29068375 | None:intergenic | 30.0% | |
| TTCCTCGTAAATGAAAAAAG+AGG | - | chr8.1:29068946-29068965 | None:intergenic | 30.0% | |
| TTGAATATTTGGCTACTTCA+AGG | + | chr8.1:29068021-29068040 | MS.gene44998:CDS | 30.0% | |
| TTTCTGATCTATGATCGTAA+CGG | - | chr8.1:29064766-29064785 | None:intergenic | 30.0% | |
| ! | AAGGGTCCTATTAACAATTT+TGG | + | chr8.1:29069722-29069741 | MS.gene44998:CDS | 30.0% |
| ! | AGTAAATTTTCAGCAGGAAA+AGG | - | chr8.1:29068415-29068434 | None:intergenic | 30.0% |
| ! | AGTTCATCAGCTGATAATTT+TGG | + | chr8.1:29066593-29066612 | MS.gene44998:intron | 30.0% |
| ! | ATATTTTCTCGCCAAAAGAT+GGG | - | chr8.1:29069295-29069314 | None:intergenic | 30.0% |
| ! | CCTGAGTATTTATGATTTGT+TGG | + | chr8.1:29067913-29067932 | MS.gene44998:intron | 30.0% |
| ! | TATATTTTCTCGCCAAAAGA+TGG | - | chr8.1:29069296-29069315 | None:intergenic | 30.0% |
| ! | TCAACAAGTAAATTTTCAGC+AGG | - | chr8.1:29068421-29068440 | None:intergenic | 30.0% |
| ! | TTCTCTTTTCCTTTTTTTCC+TGG | + | chr8.1:29068154-29068173 | MS.gene44998:intron | 30.0% |
| ! | TTGTGTAATTGTTTTCTGGA+AGG | + | chr8.1:29064664-29064683 | MS.gene44998:intron | 30.0% |
| ! | TTTTGTGAATCGCAAAAACA+CGG | + | chr8.1:29066940-29066959 | MS.gene44998:intron | 30.0% |
| !! | TATTTTCAAGGAAGATACTG+TGG | + | chr8.1:29064985-29065004 | MS.gene44998:CDS | 30.0% |
| !! | TGGTACCAGTTTTTATTTAG+TGG | + | chr8.1:29065398-29065417 | MS.gene44998:intron | 30.0% |
| !! | TTGTTTTTCTCAGAACTCTT+TGG | + | chr8.1:29068634-29068653 | MS.gene44998:intron | 30.0% |
| !!! | CTATTTGCTCTTATTTTTGC+TGG | + | chr8.1:29068972-29068991 | MS.gene44998:intron | 30.0% |
| !!! | TGATGATGTTTTGATTGGAT+TGG | + | chr8.1:29066508-29066527 | MS.gene44998:CDS | 30.0% |
| AAACCAAAACTCATCCAAAC+AGG | + | chr8.1:29067252-29067271 | MS.gene44998:intron | 35.0% | |
| AAATGTTTACATCACCGTTG+AGG | - | chr8.1:29069536-29069555 | None:intergenic | 35.0% | |
| AACATCAATCAGTCTTGGAA+GGG | - | chr8.1:29068048-29068067 | None:intergenic | 35.0% | |
| AATGTTTACATCACCGTTGA+GGG | - | chr8.1:29069535-29069554 | None:intergenic | 35.0% | |
| ACCTATAGGCAGAATTCATA+CGG | - | chr8.1:29067767-29067786 | None:intergenic | 35.0% | |
| AGAAAACTGAAACTGGAAAC+AGG | - | chr8.1:29066905-29066924 | None:intergenic | 35.0% | |
| AGAAATGAGAAGAATCGGAT+CGG | - | chr8.1:29064540-29064559 | None:intergenic | 35.0% | |
| AGATCCTTGCCTTAATAGTT+AGG | + | chr8.1:29066295-29066314 | MS.gene44998:CDS | 35.0% | |
| AGTCACATTTGATCTACCAA+CGG | + | chr8.1:29067297-29067316 | MS.gene44998:intron | 35.0% | |
| AGTTCGAAATCGAGCATAAT+CGG | - | chr8.1:29064573-29064592 | None:intergenic | 35.0% | |
| ATCAGCTGATGAACTGAATT+TGG | - | chr8.1:29066588-29066607 | None:intergenic | 35.0% | |
| ATCCACTCAACAATCTATTC+AGG | + | chr8.1:29067675-29067694 | MS.gene44998:CDS | 35.0% | |
| ATGAAACAAGTCTCTGCATT+TGG | + | chr8.1:29067973-29067992 | MS.gene44998:CDS | 35.0% | |
| ATGATAGATGAAATGCTGAC+AGG | + | chr8.1:29065022-29065041 | MS.gene44998:CDS | 35.0% | |
| CAAAAAACATCAGCTAAGAC+AGG | - | chr8.1:29065521-29065540 | None:intergenic | 35.0% | |
| CGTACTTTGTTCAAACTGAT+GGG | + | chr8.1:29067620-29067639 | MS.gene44998:CDS | 35.0% | |
| GAATTCATACGGTTCAACTA+TGG | - | chr8.1:29067756-29067775 | None:intergenic | 35.0% | |
| GACTGCAGATAAATCAACAA+TGG | - | chr8.1:29068514-29068533 | None:intergenic | 35.0% | |
| GGTATTTGTTCTGACTTAGT+TGG | + | chr8.1:29065481-29065500 | MS.gene44998:intron | 35.0% | |
| GTACTTTGTTCAAACTGATG+GGG | + | chr8.1:29067621-29067640 | MS.gene44998:CDS | 35.0% | |
| GTAGCCAAATATTCAATTGC+AGG | - | chr8.1:29068017-29068036 | None:intergenic | 35.0% | |
| GTCATCAAATTGTAGTGTAG+TGG | - | chr8.1:29065771-29065790 | None:intergenic | 35.0% | |
| GTTCCTTAAGTAGAGTTGAA+AGG | - | chr8.1:29067588-29067607 | None:intergenic | 35.0% | |
| TACAAGCAAGAAGTTCTTCT+CGG | + | chr8.1:29069238-29069257 | MS.gene44998:CDS | 35.0% | |
| TACCTGAATAGATTGTTGAG+TGG | - | chr8.1:29067680-29067699 | None:intergenic | 35.0% | |
| TCAAGTCATCATATATGCTG+TGG | - | chr8.1:29068703-29068722 | None:intergenic | 35.0% | |
| TCAGCTGATGAACTGAATTT+GGG | - | chr8.1:29066587-29066606 | None:intergenic | 35.0% | |
| TCATGTGTTGCAGATTCTAA+GGG | + | chr8.1:29069704-29069723 | MS.gene44998:intron | 35.0% | |
| TCGTACTTTGTTCAAACTGA+TGG | + | chr8.1:29067619-29067638 | MS.gene44998:CDS | 35.0% | |
| TCTTCTCCCATTATGAAGAA+CGG | + | chr8.1:29069034-29069053 | MS.gene44998:intron | 35.0% | |
| TGAGCCTGCAATTGAATATT+TGG | + | chr8.1:29068010-29068029 | MS.gene44998:CDS | 35.0% | |
| TTCATGTGTTGCAGATTCTA+AGG | + | chr8.1:29069703-29069722 | MS.gene44998:intron | 35.0% | |
| TTCTATTCGAAGAACACTGA+CGG | + | chr8.1:29067883-29067902 | MS.gene44998:intron | 35.0% | |
| TTGATGTCAAAAGGGACATT+GGG | + | chr8.1:29068305-29068324 | MS.gene44998:CDS | 35.0% | |
| TTGCCTTTCAACTCTACTTA+AGG | + | chr8.1:29067582-29067601 | MS.gene44998:CDS | 35.0% | |
| TTTGAATTTGATTGTGTGGC+AGG | + | chr8.1:29064919-29064938 | MS.gene44998:intron | 35.0% | |
| ! | AAAGTTTGAAAGCACAAGCA+TGG | + | chr8.1:29068366-29068385 | MS.gene44998:CDS | 35.0% |
| ! | AAGAAGCACATCCAATTGTA+AGG | - | chr8.1:29065348-29065367 | None:intergenic | 35.0% |
| ! | AATGCTGACAGGTAATTTGT+TGG | + | chr8.1:29065033-29065052 | MS.gene44998:intron | 35.0% |
| ! | AGATACTGTGGAGTATGTTT+TGG | + | chr8.1:29064997-29065016 | MS.gene44998:CDS | 35.0% |
| ! | CAAGATAATACATGGTGCTA+AGG | - | chr8.1:29068768-29068787 | None:intergenic | 35.0% |
| ! | TAGTTGTCTCAGTTTAGCTT+TGG | + | chr8.1:29065460-29065479 | MS.gene44998:intron | 35.0% |
| ! | TGATAGTTCTACCACTTCAA+AGG | - | chr8.1:29067104-29067123 | None:intergenic | 35.0% |
| ! | TGTTTTGCGCGATATTTTCA+AGG | + | chr8.1:29064973-29064992 | MS.gene44998:CDS | 35.0% |
| ! | TTTTTGTTCCCACGGAAATT+TGG | + | chr8.1:29065564-29065583 | MS.gene44998:intron | 35.0% |
| !! | ACTGAATTTGGGTTAGTGAA+AGG | - | chr8.1:29066576-29066595 | None:intergenic | 35.0% |
| !! | CATATTTTCGGGGTAAAAAC+CGG | - | chr8.1:29067709-29067728 | None:intergenic | 35.0% |
| !! | CTGAATTTGGGTTAGTGAAA+GGG | - | chr8.1:29066575-29066594 | None:intergenic | 35.0% |
| !! | GCTTGTTGTATGAAGATCAA+GGG | + | chr8.1:29066729-29066748 | MS.gene44998:intron | 35.0% |
| !! | TGCTTGTTGTATGAAGATCA+AGG | + | chr8.1:29066728-29066747 | MS.gene44998:intron | 35.0% |
| !! | TTTTGAAGAGCATGATTTCC+AGG | + | chr8.1:29069321-29069340 | MS.gene44998:CDS | 35.0% |
| !!! | AATGCTTGTTTTTGTTCCCA+CGG | + | chr8.1:29065556-29065575 | MS.gene44998:intron | 35.0% |
| !!! | CACCTCTTTTTTCATTTACG+AGG | + | chr8.1:29068941-29068960 | MS.gene44998:intron | 35.0% |
| !!! | CAGTGCATTTTTAGTAACCT+CGG | - | chr8.1:29069889-29069908 | None:intergenic | 35.0% |
| !!! | CTTTTGCTCTTGTTTTGTCT+CGG | + | chr8.1:29065423-29065442 | MS.gene44998:intron | 35.0% |
| !!! | GATGTTTTTTGTCCCAGTTA+CGG | + | chr8.1:29065530-29065549 | MS.gene44998:intron | 35.0% |
| !!! | GCTCTTATTTTTGCTGGATA+TGG | + | chr8.1:29068978-29068997 | MS.gene44998:intron | 35.0% |
| !!! | GTTTTCATAGGATTTGTTGG+AGG | + | chr8.1:29069153-29069172 | MS.gene44998:intron | 35.0% |
| AAAGATGGGATCTTTGTGCA+TGG | - | chr8.1:29069281-29069300 | None:intergenic | 40.0% | |
| AAAGTATGCAAGCTTCTTGC+AGG | + | chr8.1:29069938-29069957 | MS.gene44998:CDS | 40.0% | |
| AACAAGCATTAGACCGTAAC+TGG | - | chr8.1:29065546-29065565 | None:intergenic | 40.0% | |
| AACCTGATCGGTGGTTAATT+CGG | - | chr8.1:29064513-29064532 | None:intergenic | 40.0% | |
| AACTCTACTTAAGGAACCTG+TGG | + | chr8.1:29067591-29067610 | MS.gene44998:CDS | 40.0% | |
| AAGATGGGATCTTTGTGCAT+GGG | - | chr8.1:29069280-29069299 | None:intergenic | 40.0% | |
| AATGATTCTTTGCCCCTCAA+CGG | + | chr8.1:29069519-29069538 | MS.gene44998:intron | 40.0% | |
| AATTTGATTGTGTGGCAGGA+TGG | + | chr8.1:29064923-29064942 | MS.gene44998:intron | 40.0% | |
| ACAAGCATTAGACCGTAACT+GGG | - | chr8.1:29065545-29065564 | None:intergenic | 40.0% | |
| ACCGTATGAATTCTGCCTAT+AGG | + | chr8.1:29067763-29067782 | MS.gene44998:intron | 40.0% | |
| ACTTAGTTGGATCTCGGTAT+TGG | + | chr8.1:29065494-29065513 | MS.gene44998:intron | 40.0% | |
| ATAGATTGTTGAGTGGATGC+TGG | - | chr8.1:29067673-29067692 | None:intergenic | 40.0% | |
| ATCGCAAAAACACGGAGAAT+TGG | + | chr8.1:29066948-29066967 | MS.gene44998:intron | 40.0% | |
| ATGTTTACATCACCGTTGAG+GGG | - | chr8.1:29069534-29069553 | None:intergenic | 40.0% | |
| ATTCGAGACCAAATTTCCGT+GGG | - | chr8.1:29065575-29065594 | None:intergenic | 40.0% | |
| CAACATCAATCAGTCTTGGA+AGG | - | chr8.1:29068049-29068068 | None:intergenic | 40.0% | |
| CCACGATATGAATCCTCATT+GGG | + | chr8.1:29067367-29067386 | MS.gene44998:intron | 40.0% | |
| CGGCCATATATCCTTACAAT+TGG | + | chr8.1:29065334-29065353 | MS.gene44998:intron | 40.0% | |
| CTGAAAAACACGAGAATGCT+AGG | + | chr8.1:29067020-29067039 | MS.gene44998:intron | 40.0% | |
| CTTGATGTCAAAAGGGACAT+TGG | + | chr8.1:29068304-29068323 | MS.gene44998:CDS | 40.0% | |
| GCATTAGGCTAGATGCATTT+AGG | - | chr8.1:29067859-29067878 | None:intergenic | 40.0% | |
| GTCACATTTGATCTACCAAC+GGG | + | chr8.1:29067298-29067317 | MS.gene44998:intron | 40.0% | |
| GTGAAAGCAATGGCAGTAAA+AGG | - | chr8.1:29065310-29065329 | None:intergenic | 40.0% | |
| GTTCTGACTTAGTTGGATCT+CGG | + | chr8.1:29065488-29065507 | MS.gene44998:intron | 40.0% | |
| GTTGTCTGAATGTCTATGCA+TGG | - | chr8.1:29068882-29068901 | None:intergenic | 40.0% | |
| GTTGTGCAGAGTTCAATCAT+TGG | + | chr8.1:29068464-29068483 | MS.gene44998:intron | 40.0% | |
| TAGACATTCCAAGCTTACAC+AGG | - | chr8.1:29067791-29067810 | None:intergenic | 40.0% | |
| TATGGACACTTATCCCAATG+AGG | - | chr8.1:29067383-29067402 | None:intergenic | 40.0% | |
| TATTCGAGACCAAATTTCCG+TGG | - | chr8.1:29065576-29065595 | None:intergenic | 40.0% | |
| TCACATTTGATCTACCAACG+GGG | + | chr8.1:29067299-29067318 | MS.gene44998:intron | 40.0% | |
| TCAGTAGGCCATATTACATC+TGG | - | chr8.1:29065604-29065623 | None:intergenic | 40.0% | |
| TCCACGATATGAATCCTCAT+TGG | + | chr8.1:29067366-29067385 | MS.gene44998:intron | 40.0% | |
| TGAAACTGGAAACAGGTTTC+AGG | - | chr8.1:29066898-29066917 | None:intergenic | 40.0% | |
| TGTAAGGATATATGGCCGAA+AGG | - | chr8.1:29065332-29065351 | None:intergenic | 40.0% | |
| TTATGATGGCTAGGATGAGA+AGG | + | chr8.1:29068191-29068210 | MS.gene44998:intron | 40.0% | |
| TTTGACAACACTAGGCTTGA+GGG | + | chr8.1:29065849-29065868 | MS.gene44998:intron | 40.0% | |
| ! | GAAACAGTCTTGCCCTTTTA+GGG | - | chr8.1:29065147-29065166 | None:intergenic | 40.0% |
| ! | GAAAGGCAATTGATAGCAGT+TGG | - | chr8.1:29067571-29067590 | None:intergenic | 40.0% |
| ! | TGAAACAGTCTTGCCCTTTT+AGG | - | chr8.1:29065148-29065167 | None:intergenic | 40.0% |
| ! | TGCACAAAGATCCCATCTTT+TGG | + | chr8.1:29069281-29069300 | MS.gene44998:CDS | 40.0% |
| ! | TGCATCCAACGACTTTTCTT+GGG | + | chr8.1:29069912-29069931 | MS.gene44998:CDS | 40.0% |
| !! | GAAACAGGTTTCAGGTGTTT+TGG | - | chr8.1:29066890-29066909 | None:intergenic | 40.0% |
| !! | TCAGAACTCTTTGGAATGAC+TGG | + | chr8.1:29068643-29068662 | MS.gene44998:intron | 40.0% |
| AAGAGGGAACAACGCATATG+TGG | - | chr8.1:29069469-29069488 | None:intergenic | 45.0% | |
| AAGCTTACACAGGCACCTAT+AGG | - | chr8.1:29067781-29067800 | None:intergenic | 45.0% | |
| AATGGAATCACAGGTATGCC+AGG | - | chr8.1:29069362-29069381 | None:intergenic | 45.0% | |
| ACAAACACGCGAACATAAGC+CGG | - | chr8.1:29064950-29064969 | None:intergenic | 45.0% | |
| ACATTTGATCTACCAACGGG+GGG | + | chr8.1:29067301-29067320 | MS.gene44998:intron | 45.0% | |
| AGAAGTTCTTCTCGGCAATC+TGG | + | chr8.1:29069246-29069265 | MS.gene44998:CDS | 45.0% | |
| AGAGGGAACAACGCATATGT+GGG | - | chr8.1:29069468-29069487 | None:intergenic | 45.0% | |
| AGCTAGAGTCCTTGGATCAT+TGG | - | chr8.1:29069754-29069773 | None:intergenic | 45.0% | |
| AGGGATAATGCACAGATACC+TGG | - | chr8.1:29069342-29069361 | None:intergenic | 45.0% | |
| AGGTATCTGTGCATTATCCC+TGG | + | chr8.1:29069341-29069360 | MS.gene44998:intron | 45.0% | |
| AGTCGCTGTTTGACAACACT+AGG | + | chr8.1:29065841-29065860 | MS.gene44998:intron | 45.0% | |
| ATATCGTGGATCACCACAAC+TGG | - | chr8.1:29067356-29067375 | None:intergenic | 45.0% | |
| ATGGAATCACAGGTATGCCA+GGG | - | chr8.1:29069361-29069380 | None:intergenic | 45.0% | |
| ATGTCCACCAAGCTTATCTC+TGG | + | chr8.1:29064719-29064738 | MS.gene44998:CDS | 45.0% | |
| CACAATTGACAACACTGCTC+AGG | - | chr8.1:29065718-29065737 | None:intergenic | 45.0% | |
| CACATTTGATCTACCAACGG+GGG | + | chr8.1:29067300-29067319 | MS.gene44998:intron | 45.0% | |
| CATCAAGTAACTGTGCTCTC+TGG | - | chr8.1:29064790-29064809 | None:intergenic | 45.0% | |
| CCCAATGAGGATTCATATCG+TGG | - | chr8.1:29067370-29067389 | None:intergenic | 45.0% | |
| CCTGACACTGCAATCAGAAA+GGG | - | chr8.1:29066420-29066439 | None:intergenic | 45.0% | |
| CTAGTAAGCAAGCATTCGAG+GGG | - | chr8.1:29068680-29068699 | None:intergenic | 45.0% | |
| CTGACACTGCAATCAGAAAG+GGG | - | chr8.1:29066419-29066438 | None:intergenic | 45.0% | |
| CTGACCTTAAAGCCAAGGAA+CGG | + | chr8.1:29069835-29069854 | MS.gene44998:CDS | 45.0% | |
| CTGAGCAGTGTTGTCAATTG+TGG | + | chr8.1:29065716-29065735 | MS.gene44998:intron | 45.0% | |
| CTGCCATTGCTTTCACCTTT+CGG | + | chr8.1:29065314-29065333 | MS.gene44998:intron | 45.0% | |
| GCATATAATTGGGGCCTGTT+TGG | - | chr8.1:29067269-29067288 | None:intergenic | 45.0% | |
| GCTAGTAAGCAAGCATTCGA+GGG | - | chr8.1:29068681-29068700 | None:intergenic | 45.0% | |
| GCTTGTTCCAGAGATAAGCT+TGG | - | chr8.1:29064729-29064748 | None:intergenic | 45.0% | |
| GTCAGGCCAAAAAATCAGAG+TGG | + | chr8.1:29066434-29066453 | MS.gene44998:CDS | 45.0% | |
| GTGGATGCTGGACAAATCAA+TGG | - | chr8.1:29067661-29067680 | None:intergenic | 45.0% | |
| GTTGTGTCTCAGTTGCGATT+TGG | + | chr8.1:29065378-29065397 | MS.gene44998:intron | 45.0% | |
| GTTTCATGACAATGCTCTCG+CGG | + | chr8.1:29065162-29065181 | MS.gene44998:CDS | 45.0% | |
| GTTTGACAACACTAGGCTTG+AGG | + | chr8.1:29065848-29065867 | MS.gene44998:intron | 45.0% | |
| TACTTAAGGAACCTGTGGTC+AGG | + | chr8.1:29067596-29067615 | MS.gene44998:CDS | 45.0% | |
| TAGTAAGCAAGCATTCGAGG+GGG | - | chr8.1:29068679-29068698 | None:intergenic | 45.0% | |
| TAGTTTCATCACCCGTTCCT+TGG | - | chr8.1:29069850-29069869 | None:intergenic | 45.0% | |
| TATAGGTGCCTGTGTAAGCT+TGG | + | chr8.1:29067780-29067799 | MS.gene44998:intron | 45.0% | |
| TATCGTGGATCACCACAACT+GGG | - | chr8.1:29067355-29067374 | None:intergenic | 45.0% | |
| TCTTTCAGACTGCTTCGGAA+AGG | + | chr8.1:29066243-29066262 | MS.gene44998:intron | 45.0% | |
| TGACCTTAAAGCCAAGGAAC+GGG | + | chr8.1:29069836-29069855 | MS.gene44998:CDS | 45.0% | |
| TGGACATGTAGGTTTCCCAT+GGG | - | chr8.1:29064706-29064725 | None:intergenic | 45.0% | |
| TGTGACTGACCTTAAAGCCA+AGG | + | chr8.1:29069830-29069849 | MS.gene44998:CDS | 45.0% | |
| TGTTCCAGAGATAAGCTTGG+TGG | - | chr8.1:29064726-29064745 | None:intergenic | 45.0% | |
| TTCCGAAGCAGTCTGAAAGA+CGG | - | chr8.1:29066243-29066262 | None:intergenic | 45.0% | |
| TTCGAAGAACACTGACGGAA+TGG | + | chr8.1:29067888-29067907 | MS.gene44998:intron | 45.0% | |
| TTCTTCTCGGCAATCTGGAT+TGG | + | chr8.1:29069251-29069270 | MS.gene44998:CDS | 45.0% | |
| TTGCACCCAAGAAAAGTCGT+TGG | - | chr8.1:29069920-29069939 | None:intergenic | 45.0% | |
| TTTGGCAGCGAACCCTAAAA+GGG | + | chr8.1:29065132-29065151 | MS.gene44998:intron | 45.0% | |
| ! | CACTGAACTCTCTGGAAGAA+GGG | + | chr8.1:29069176-29069195 | MS.gene44998:CDS | 45.0% |
| ! | CTGCATCCAACGACTTTTCT+TGG | + | chr8.1:29069911-29069930 | MS.gene44998:CDS | 45.0% |
| ! | GATAAGCTTGGTGGACATGT+AGG | - | chr8.1:29064717-29064736 | None:intergenic | 45.0% |
| ! | GCGTGTATGTTCCTTTGAAG+TGG | + | chr8.1:29067090-29067109 | MS.gene44998:intron | 45.0% |
| ! | GTTTTGTCTCGGTTGTGGTT+TGG | + | chr8.1:29065434-29065453 | MS.gene44998:intron | 45.0% |
| !! | AATGAATCATGAGAGTGCCG+AGG | + | chr8.1:29069869-29069888 | MS.gene44998:CDS | 45.0% |
| !! | GGTAAAATGGCTTTGTGAGC+AGG | + | chr8.1:29066529-29066548 | MS.gene44998:CDS | 45.0% |
| !! | TTTCTGGAAGGTTCTGAGCA+GGG | + | chr8.1:29064676-29064695 | MS.gene44998:intron | 45.0% |
| !!! | CTCTTGTTTTGTCTCGGTTG+TGG | + | chr8.1:29065429-29065448 | MS.gene44998:intron | 45.0% |
| !!! | GCAACGCCACTCTGATTTTT+TGG | - | chr8.1:29066443-29066462 | None:intergenic | 45.0% |
| !!! | TTTTCTGGAAGGTTCTGAGC+AGG | + | chr8.1:29064675-29064694 | MS.gene44998:intron | 45.0% |
| AAGCCTTCTCATCCAAGTCG+TGG | + | chr8.1:29067541-29067560 | MS.gene44998:CDS | 50.0% | |
| ACAAAGTACGACCTGACCAC+AGG | - | chr8.1:29067610-29067629 | None:intergenic | 50.0% | |
| ACAGTTCATCCAGTGCCATC+CGG | + | chr8.1:29069794-29069813 | MS.gene44998:CDS | 50.0% | |
| AGCACAAGCATGGAGTGATG+AGG | + | chr8.1:29068376-29068395 | MS.gene44998:CDS | 50.0% | |
| AGCCGAATTAACCACCGATC+AGG | + | chr8.1:29064508-29064527 | MS.gene44998:CDS | 50.0% | |
| ATCGTGGATCACCACAACTG+GGG | - | chr8.1:29067354-29067373 | None:intergenic | 50.0% | |
| CAAGCAACAGCTAGAGTCCT+TGG | - | chr8.1:29069762-29069781 | None:intergenic | 50.0% | |
| CAGAGTGGCGTTGCTTCAAA+TGG | + | chr8.1:29066449-29066468 | MS.gene44998:CDS | 50.0% | |
| CCCTTTCTGATTGCAGTGTC+AGG | + | chr8.1:29066417-29066436 | MS.gene44998:intron | 50.0% | |
| CTTTGGCAGCGAACCCTAAA+AGG | + | chr8.1:29065131-29065150 | MS.gene44998:intron | 50.0% | |
| GACTGCTTCGGAAAGGAAAC+TGG | + | chr8.1:29066250-29066269 | MS.gene44998:intron | 50.0% | |
| GATCGGTGGTTAATTCGGCT+TGG | - | chr8.1:29064508-29064527 | None:intergenic | 50.0% | |
| GCCTGACACTGCAATCAGAA+AGG | - | chr8.1:29066421-29066440 | None:intergenic | 50.0% | |
| GGCTAGTAAGCAAGCATTCG+AGG | - | chr8.1:29068682-29068701 | None:intergenic | 50.0% | |
| GTCCGTCTTTCAGACTGCTT+CGG | + | chr8.1:29066238-29066257 | MS.gene44998:intron | 50.0% | |
| GTGGACATGTAGGTTTCCCA+TGG | - | chr8.1:29064707-29064726 | None:intergenic | 50.0% | |
| TCTGAGCAGGGATATCCCAT+GGG | + | chr8.1:29064688-29064707 | MS.gene44998:CDS | 50.0% | |
| TGGACTCGTCCAATGATCCA+AGG | + | chr8.1:29069742-29069761 | MS.gene44998:CDS | 50.0% | |
| TGGCCGAAAGGTGAAAGCAA+TGG | - | chr8.1:29065320-29065339 | None:intergenic | 50.0% | |
| TTCTGAGCAGGGATATCCCA+TGG | + | chr8.1:29064687-29064706 | MS.gene44998:CDS | 50.0% | |
| ! | ACTCCACGACTTGGATGAGA+AGG | - | chr8.1:29067547-29067566 | None:intergenic | 50.0% |
| ! | CTCTCTGGAAGAAGGGCTTA+AGG | + | chr8.1:29069183-29069202 | MS.gene44998:CDS | 50.0% |
| ! | GCACTGAACTCTCTGGAAGA+AGG | + | chr8.1:29069175-29069194 | MS.gene44998:CDS | 50.0% |
| ! | GGGCCTGTTTGGATGAGTTT+TGG | - | chr8.1:29067258-29067277 | None:intergenic | 50.0% |
| !! | TCACCCGTTCCTTGGCTTTA+AGG | - | chr8.1:29069842-29069861 | None:intergenic | 50.0% |
| AAGCATTCGAGGGGGAGATG+GGG | - | chr8.1:29068671-29068690 | None:intergenic | 55.0% | |
| AGGGACATTGGGTGCTCAGA+TGG | + | chr8.1:29068316-29068335 | MS.gene44998:CDS | 55.0% | |
| ATCGGAACGAACCTGATCGG+TGG | - | chr8.1:29064522-29064541 | None:intergenic | 55.0% | |
| CAAGCATTCGAGGGGGAGAT+GGG | - | chr8.1:29068672-29068691 | None:intergenic | 55.0% | |
| CGGATCGGAACGAACCTGAT+CGG | - | chr8.1:29064525-29064544 | None:intergenic | 55.0% | |
| CGTAACGGCGCAAGAGTTGA+AGG | - | chr8.1:29064751-29064770 | None:intergenic | 55.0% | |
| GATTGTGTGGCAGGATGGTC+CGG | + | chr8.1:29064928-29064947 | MS.gene44998:intron | 55.0% | |
| GCAGTTGGAACTCCACGACT+TGG | - | chr8.1:29067556-29067575 | None:intergenic | 55.0% | |
| GGGGTTGGGTCTTGCAAAAG+AGG | + | chr8.1:29067320-29067339 | MS.gene44998:intron | 55.0% | |
| TCGTGGATCACCACAACTGG+GGG | - | chr8.1:29067353-29067372 | None:intergenic | 55.0% | |
| TGATCTACCAACGGGGGGTT+GGG | + | chr8.1:29067306-29067325 | MS.gene44998:intron | 55.0% | |
| TTGATCTACCAACGGGGGGT+TGG | + | chr8.1:29067305-29067324 | MS.gene44998:intron | 55.0% | |
| !! | GTTGGAGGCACTGAACTCTC+TGG | + | chr8.1:29069168-29069187 | MS.gene44998:CDS | 55.0% |
| CGTGGATCACCACAACTGGG+GGG | - | chr8.1:29067352-29067371 | None:intergenic | 60.0% | |
| GCAAGCATTCGAGGGGGAGA+TGG | - | chr8.1:29068673-29068692 | None:intergenic | 60.0% | |
| GTCACAATGATCCGCCCAGC+CGG | - | chr8.1:29069816-29069835 | None:intergenic | 60.0% | |
| GTGGATCACCACAACTGGGG+GGG | - | chr8.1:29067351-29067370 | None:intergenic | 60.0% | |
| TCATCCAGTGCCATCCGGCT+GGG | + | chr8.1:29069799-29069818 | MS.gene44998:CDS | 60.0% | |
| TTCATCCAGTGCCATCCGGC+TGG | + | chr8.1:29069798-29069817 | MS.gene44998:CDS | 60.0% | |
| CAATGATCCGCCCAGCCGGA+TGG | - | chr8.1:29069812-29069831 | None:intergenic | 65.0% | |
| TGCAAGACCCAACCCCCCGT+TGG | - | chr8.1:29067316-29067335 | None:intergenic | 65.0% | |
| AGGCTCGTCCCCCCCAGTTG+TGG | + | chr8.1:29067340-29067359 | MS.gene44998:intron | 70.0% | |
| TCCAGTGCCATCCGGCTGGG+CGG | + | chr8.1:29069802-29069821 | MS.gene44998:CDS | 70.0% | |
| TCCGCCCAGCCGGATGGCAC+TGG | - | chr8.1:29069806-29069825 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 29064500 | 29069965 | 29064500 | ID=MS.gene44998 |
| chr8.1 | mRNA | 29064500 | 29069965 | 29064500 | ID=MS.gene44998.t1;Parent=MS.gene44998 |
| chr8.1 | exon | 29064500 | 29064529 | 29064500 | ID=MS.gene44998.t1.exon1;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29064500 | 29064529 | 29064500 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29064686 | 29064811 | 29064686 | ID=MS.gene44998.t1.exon2;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29064686 | 29064811 | 29064686 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29064941 | 29065043 | 29064941 | ID=MS.gene44998.t1.exon3;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29064941 | 29065043 | 29064941 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29065140 | 29065211 | 29065140 | ID=MS.gene44998.t1.exon4;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29065140 | 29065211 | 29065140 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29066265 | 29066316 | 29066265 | ID=MS.gene44998.t1.exon5;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29066265 | 29066316 | 29066265 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29066433 | 29066550 | 29066433 | ID=MS.gene44998.t1.exon6;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29066433 | 29066550 | 29066433 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29067535 | 29067696 | 29067535 | ID=MS.gene44998.t1.exon7;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29067535 | 29067696 | 29067535 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29067966 | 29068091 | 29067966 | ID=MS.gene44998.t1.exon8;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29067966 | 29068091 | 29067966 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29068272 | 29068397 | 29068272 | ID=MS.gene44998.t1.exon9;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29068272 | 29068397 | 29068272 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29069163 | 29069342 | 29069163 | ID=MS.gene44998.t1.exon10;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29069163 | 29069342 | 29069163 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| chr8.1 | exon | 29069717 | 29069965 | 29069717 | ID=MS.gene44998.t1.exon11;Parent=MS.gene44998.t1 |
| chr8.1 | CDS | 29069717 | 29069965 | 29069717 | ID=cds.MS.gene44998.t1;Parent=MS.gene44998.t1 |
| Gene Sequence |
| Protein sequence |
