Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024661.t1 | XP_003611036.1 | 98.3 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 1.90E-115 | 425.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024661.t1 | Q41396 | 79.9 | 229 | 45 | 1 | 1 | 229 | 1 | 228 | 3.8e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024661.t1 | B7FMK2 | 98.3 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 1.4e-115 | 425.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024661 | MS.gene011917 | PPI |
| MS.gene024661 | MS.gene90980 | PPI |
| MS.gene024661 | MS.gene072752 | PPI |
| MS.gene024661 | MS.gene21642 | PPI |
| MS.gene024661 | MS.gene003523 | PPI |
| MS.gene024661 | MS.gene28505 | PPI |
| MS.gene024661 | MS.gene057707 | PPI |
| MS.gene048900 | MS.gene024661 | PPI |
| MS.gene024661 | MS.gene44998 | PPI |
| MS.gene024661 | MS.gene06042 | PPI |
| MS.gene024661 | MS.gene22330 | PPI |
| MS.gene024661 | MS.gene87386 | PPI |
| MS.gene024661 | MS.gene55771 | PPI |
| MS.gene024661 | MS.gene52076 | PPI |
| MS.gene024661 | MS.gene91075 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024661.t1 | MTR_5g009720 | 98.261 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 3.94e-164 | 452 |
| MS.gene024661.t1 | MTR_8g099190 | 78.243 | 239 | 42 | 1 | 1 | 229 | 1 | 239 | 1.08e-132 | 373 |
| MS.gene024661.t1 | MTR_8g099190 | 74.502 | 251 | 42 | 2 | 1 | 229 | 1 | 251 | 6.22e-129 | 364 |
| MS.gene024661.t1 | MTR_8g099190 | 72.803 | 239 | 40 | 2 | 1 | 229 | 1 | 224 | 3.58e-118 | 336 |
| MS.gene024661.t1 | MTR_4g073800 | 71.818 | 220 | 60 | 1 | 1 | 218 | 1 | 220 | 1.01e-110 | 318 |
| MS.gene024661.t1 | MTR_8g099190 | 76.020 | 196 | 37 | 1 | 1 | 186 | 1 | 196 | 3.03e-103 | 298 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024661.t1 | AT4G11150 | 79.039 | 229 | 48 | 0 | 1 | 229 | 1 | 229 | 7.08e-132 | 371 |
| MS.gene024661.t1 | AT1G64200 | 76.170 | 235 | 50 | 1 | 1 | 229 | 1 | 235 | 9.22e-128 | 360 |
| MS.gene024661.t1 | AT1G64200 | 75.771 | 227 | 49 | 1 | 1 | 221 | 1 | 227 | 3.97e-122 | 346 |
| MS.gene024661.t1 | AT3G08560 | 70.175 | 228 | 66 | 1 | 1 | 226 | 1 | 228 | 1.55e-108 | 312 |
| MS.gene024661.t1 | AT1G64200 | 75.789 | 190 | 40 | 1 | 1 | 184 | 1 | 190 | 1.39e-98 | 285 |
Find 49 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTTCTCTTCGGCTTCT+TGG | 0.240421 | 5.1:-3280951 | None:intergenic |
| TCTAAAAGATCTCGTTATTC+AGG | 0.260442 | 5.1:+3283332 | MS.gene024661:CDS |
| GCACTTGGTAGAGGAAGTTT+TGG | 0.315846 | 5.1:+3284138 | MS.gene024661:CDS |
| CAGCTCTGGAGGTGTGGTAT+TGG | 0.325702 | 5.1:+3284548 | MS.gene024661:intron |
| ATCATGGGGATTGTGATGGC+TGG | 0.343640 | 5.1:-3284248 | None:intergenic |
| CAGATCCGCAAGCAGCTCTT+TGG | 0.350673 | 5.1:+3285768 | MS.gene024661:intron |
| TTTATTAACCACATCATCTT+GGG | 0.412688 | 5.1:-3283244 | None:intergenic |
| CCTCTTTCCGACACCTCAAT+AGG | 0.416620 | 5.1:-3284111 | None:intergenic |
| AAATACACTTGATGCGCGTT+TGG | 0.420715 | 5.1:+3284599 | MS.gene024661:CDS |
| GATCTCGTTGGCTTTCTCTT+CGG | 0.426517 | 5.1:-3280959 | None:intergenic |
| TCCTTATCAACAACGATCTC+TGG | 0.435488 | 5.1:-3284205 | None:intergenic |
| CACCATCTGCTGGATTTGCT+TGG | 0.437939 | 5.1:-3280917 | None:intergenic |
| GTTGAATGCTTCACGGTTGA+AGG | 0.443148 | 5.1:+3283212 | MS.gene024661:CDS |
| ACCAGAGATCGTTGTTGATA+AGG | 0.446783 | 5.1:+3284204 | MS.gene024661:CDS |
| TGCTCAGGAGTATGCTGAAA+AGG | 0.449579 | 5.1:+3284168 | MS.gene024661:CDS |
| CTTTCTCTTCGGCTTCTTGG+CGG | 0.452151 | 5.1:-3280948 | None:intergenic |
| GGATGAACCGCACCATCTGC+TGG | 0.455942 | 5.1:-3280927 | None:intergenic |
| CTATGCAGTTGAATGCTTCA+CGG | 0.456350 | 5.1:+3283205 | MS.gene024661:CDS |
| TCATGGGGATTGTGATGGCT+GGG | 0.459295 | 5.1:-3284247 | None:intergenic |
| TTACATGTGGGAGTTTGTTA+CGG | 0.463593 | 5.1:-3284632 | None:intergenic |
| CGAGAAGTTGCAGTTGGTTG+AGG | 0.469869 | 5.1:+3281152 | MS.gene024661:CDS |
| AACATTACCAGTGGAGATCA+TGG | 0.476950 | 5.1:-3284264 | None:intergenic |
| AAGAGAAGCAAGTTGATGTT+CGG | 0.494758 | 5.1:+3281211 | MS.gene024661:CDS |
| ATGGGGATTGTGATGGCTGG+GGG | 0.508306 | 5.1:-3284245 | None:intergenic |
| CCTATTGAGGTGTCGGAAAG+AGG | 0.513705 | 5.1:+3284111 | MS.gene024661:CDS |
| TTGTTATTCTTCAGCTCTGG+AGG | 0.520387 | 5.1:+3284537 | MS.gene024661:intron |
| AGAGGACCTGCACTTGGTAG+AGG | 0.521773 | 5.1:+3284129 | MS.gene024661:CDS |
| CAATATCGAGAAGTTGCAGT+TGG | 0.528790 | 5.1:+3281146 | MS.gene024661:CDS |
| GCTCACATTCAAGAGTTCCT+TGG | 0.530777 | 5.1:-3283283 | None:intergenic |
| CATGGGGATTGTGATGGCTG+GGG | 0.531144 | 5.1:-3284246 | None:intergenic |
| CACATTCAAGAGTTCCTTGG+CGG | 0.533307 | 5.1:-3283280 | None:intergenic |
| ATTCTTCAGCTCTGGAGGTG+TGG | 0.541669 | 5.1:+3284542 | MS.gene024661:intron |
| ACATTACCAGTGGAGATCAT+GGG | 0.551646 | 5.1:-3284263 | None:intergenic |
| CTTCTGTCCTATTGAGGTGT+CGG | 0.557410 | 5.1:+3284104 | MS.gene024661:CDS |
| AAGAACCTTCTGTCCTATTG+AGG | 0.558216 | 5.1:+3284098 | MS.gene024661:CDS |
| GTGGTATTGGCTTCTCATGA+TGG | 0.567055 | 5.1:+3284561 | MS.gene024661:CDS |
| AAACTTCCTCTACCAAGTGC+AGG | 0.570638 | 5.1:-3284135 | None:intergenic |
| AATGAAAGAGTCTGCCGCCA+AGG | 0.574070 | 5.1:+3283266 | MS.gene024661:CDS |
| CGACACCTCAATAGGACAGA+AGG | 0.579267 | 5.1:-3284103 | None:intergenic |
| ACAATCCCCATGATCTCCAC+TGG | 0.579484 | 5.1:+3284257 | MS.gene024661:CDS |
| TCGGAAAGAGGACCTGCACT+TGG | 0.588677 | 5.1:+3284123 | MS.gene024661:CDS |
| AGCGGAAACAGAGATCTCGT+TGG | 0.593299 | 5.1:-3280971 | None:intergenic |
| CTCCAAGCAAATCCAGCAGA+TGG | 0.599092 | 5.1:+3280915 | MS.gene024661:CDS |
| GAAGTGATTTACTTCTTCAG+CGG | 0.599607 | 5.1:-3280989 | None:intergenic |
| TCTTCAAGCCCAAGATGATG+TGG | 0.617482 | 5.1:+3283236 | MS.gene024661:CDS |
| CATTACCAGTGGAGATCATG+GGG | 0.626749 | 5.1:-3284262 | None:intergenic |
| AGCAAATCCAGCAGATGGTG+CGG | 0.627594 | 5.1:+3280920 | MS.gene024661:CDS |
| GGAGATCATGGGGATTGTGA+TGG | 0.645556 | 5.1:-3284252 | None:intergenic |
| CTTGTCCAAAGAGCTGCTTG+CGG | 0.716823 | 5.1:-3285773 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAAAAATATGTAAA+AGG | - | chr5.1:3281251-3281270 | None:intergenic | 10.0% |
| !! | AAAGATATAAATAATAAGAA+AGG | - | chr5.1:3283716-3283735 | None:intergenic | 10.0% |
| !! | ATACTAAATTCAAATATATT+CGG | - | chr5.1:3281630-3281649 | None:intergenic | 10.0% |
| !!! | AAAATAACAAAAATTTTGTT+AGG | - | chr5.1:3283966-3283985 | None:intergenic | 10.0% |
| !!! | TTATTTTCTCAAATTATTAT+CGG | - | chr5.1:3283551-3283570 | None:intergenic | 10.0% |
| !!! | TTTTTAGTAAAAAAACTATT+TGG | + | chr5.1:3285629-3285648 | MS.gene024661:intron | 10.0% |
| !! | AAAAAATTAACAAACAAAAG+AGG | - | chr5.1:3285238-3285257 | None:intergenic | 15.0% |
| !! | AAAAATTAACAAACAAAAGA+GGG | - | chr5.1:3285237-3285256 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr5.1:3282150-3282169 | None:intergenic | 15.0% |
| !! | AAAATATAATTGGAAAAATC+AGG | - | chr5.1:3283396-3283415 | None:intergenic | 15.0% |
| !! | AAACAAATATCTAACATAAA+TGG | - | chr5.1:3284730-3284749 | None:intergenic | 15.0% |
| !! | ATAACAAATAATACAATATC+AGG | - | chr5.1:3284524-3284543 | None:intergenic | 15.0% |
| !!! | GTTGTGATATTATATTTTTT+AGG | + | chr5.1:3284429-3284448 | MS.gene024661:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr5.1:3282149-3282168 | MS.gene024661:intron | 15.0% |
| !!! | TTTCCAATTATATTTTCAAT+AGG | + | chr5.1:3283400-3283419 | MS.gene024661:intron | 15.0% |
| !! | AAAGTACAAGTTATAATCAA+CGG | - | chr5.1:3285157-3285176 | None:intergenic | 20.0% |
| !! | ATCCAACTATTATAATTGAA+TGG | - | chr5.1:3281448-3281467 | None:intergenic | 20.0% |
| !! | CTTTCAATATTTGCAATATA+AGG | + | chr5.1:3285118-3285137 | MS.gene024661:intron | 20.0% |
| !! | GAAAAAGTGAAATTAAGAAA+TGG | - | chr5.1:3281023-3281042 | None:intergenic | 20.0% |
| !! | GAAACTTGGAATTAAATAAA+AGG | + | chr5.1:3284045-3284064 | MS.gene024661:intron | 20.0% |
| !! | GATCCTATTGAAAATATAAT+TGG | - | chr5.1:3283406-3283425 | None:intergenic | 20.0% |
| !! | GCATATTCTTATAAAATTCT+AGG | - | chr5.1:3283428-3283447 | None:intergenic | 20.0% |
| !! | TACTAAAAATCACATTTGAA+GGG | - | chr5.1:3285618-3285637 | None:intergenic | 20.0% |
| !! | TATAACAAAAACTTACATGT+GGG | - | chr5.1:3284647-3284666 | None:intergenic | 20.0% |
| !! | TCAATTATAATAGTTGGATT+TGG | + | chr5.1:3281449-3281468 | MS.gene024661:intron | 20.0% |
| !! | TTAATCAAGAACAGTTATTT+AGG | - | chr5.1:3284306-3284325 | None:intergenic | 20.0% |
| !! | TTACTAAAAATCACATTTGA+AGG | - | chr5.1:3285619-3285638 | None:intergenic | 20.0% |
| !! | TTATAACAAAAACTTACATG+TGG | - | chr5.1:3284648-3284667 | None:intergenic | 20.0% |
| !!! | AAAATTTTGTTAGGTTTCTT+TGG | - | chr5.1:3283957-3283976 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTAGGTTTCTTT+GGG | - | chr5.1:3283956-3283975 | None:intergenic | 20.0% |
| !!! | AACGTAGTTTTTTTTATACT+AGG | + | chr5.1:3285706-3285725 | MS.gene024661:intron | 20.0% |
| !!! | CATATAGTTTTGGATTTATT+TGG | + | chr5.1:3281384-3281403 | MS.gene024661:intron | 20.0% |
| !!! | CTACTTGGAATATAATTTTA+GGG | + | chr5.1:3283886-3283905 | MS.gene024661:intron | 20.0% |
| !!! | GGTCAGTTAAAATTTTAATA+TGG | + | chr5.1:3283353-3283372 | MS.gene024661:intron | 20.0% |
| !!! | TCAAAGTTTTCATATAGTTT+TGG | + | chr5.1:3281374-3281393 | MS.gene024661:intron | 20.0% |
| !!! | TCTACTTGGAATATAATTTT+AGG | + | chr5.1:3283885-3283904 | MS.gene024661:intron | 20.0% |
| !!! | TCTTTTTCTAACTTGAAAAA+TGG | + | chr5.1:3283130-3283149 | MS.gene024661:intron | 20.0% |
| !!! | TGCATAGTGTTTTTTTTTTT+GGG | + | chr5.1:3284694-3284713 | MS.gene024661:intron | 20.0% |
| !!! | TTGCATAGTGTTTTTTTTTT+TGG | + | chr5.1:3284693-3284712 | MS.gene024661:intron | 20.0% |
| !!! | TTGTTATTTACATATGTGAA+TGG | + | chr5.1:3281304-3281323 | MS.gene024661:intron | 20.0% |
| ! | AAACACACTATATAAATACC+GGG | - | chr5.1:3285558-3285577 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr5.1:3282893-3282912 | MS.gene024661:intron | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr5.1:3282143-3282162 | None:intergenic | 25.0% |
| ! | AATAATAAGAAAGGATGAGA+AGG | - | chr5.1:3283707-3283726 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr5.1:3282142-3282161 | None:intergenic | 25.0% |
| ! | AGTGAAATTAAGAAATGGAT+CGG | - | chr5.1:3281018-3281037 | None:intergenic | 25.0% |
| ! | ATAAATTAGTTGCATTGTAC+AGG | - | chr5.1:3285479-3285498 | None:intergenic | 25.0% |
| ! | ATTAAAACAATCCATTATGC+CGG | + | chr5.1:3284321-3284340 | MS.gene024661:intron | 25.0% |
| ! | ATTTAATCAGTCATCATACT+TGG | - | chr5.1:3281854-3281873 | None:intergenic | 25.0% |
| ! | ATTTGATCACAAAACTTGTA+TGG | + | chr5.1:3281280-3281299 | MS.gene024661:intron | 25.0% |
| ! | CAAACACACTATATAAATAC+CGG | - | chr5.1:3285559-3285578 | None:intergenic | 25.0% |
| ! | GGTATTTATATAGTGTGTTT+GGG | + | chr5.1:3285558-3285577 | MS.gene024661:intron | 25.0% |
| ! | GTATGATGACTGATTAAATT+TGG | + | chr5.1:3281855-3281874 | MS.gene024661:intron | 25.0% |
| ! | GTTCTATCAAAGATCATATT+TGG | - | chr5.1:3282933-3282952 | None:intergenic | 25.0% |
| ! | TAAATTAGTTGCATTGTACA+GGG | - | chr5.1:3285478-3285497 | None:intergenic | 25.0% |
| ! | TAATATTGAGAAATGAAGTG+CGG | - | chr5.1:3285094-3285113 | None:intergenic | 25.0% |
| ! | TATTGTTATGGGAAAATCTA+CGG | - | chr5.1:3282100-3282119 | None:intergenic | 25.0% |
| ! | TGCCATTCAATTATAATAGT+TGG | + | chr5.1:3281443-3281462 | MS.gene024661:intron | 25.0% |
| ! | TTAAAACTCACAGATACAAT+TGG | + | chr5.1:3281482-3281501 | MS.gene024661:intron | 25.0% |
| ! | TTTAGTGTAATCATATGTGT+TGG | + | chr5.1:3283576-3283595 | MS.gene024661:intron | 25.0% |
| ! | TTTATTAACCACATCATCTT+GGG | - | chr5.1:3283247-3283266 | None:intergenic | 25.0% |
| ! | TTTGTGATGAATAGAGTAAA+GGG | + | chr5.1:3284952-3284971 | MS.gene024661:intron | 25.0% |
| !! | AACTAGTAAATTTGAAACTC+AGG | - | chr5.1:3284469-3284488 | None:intergenic | 25.0% |
| !! | AATTTTGTTAGGTTTCTTTG+GGG | - | chr5.1:3283955-3283974 | None:intergenic | 25.0% |
| !! | ACTAGTAAATTTGAAACTCA+GGG | - | chr5.1:3284468-3284487 | None:intergenic | 25.0% |
| !! | ATAGTTAGTTAACAGAGTTT+TGG | - | chr5.1:3284992-3285011 | None:intergenic | 25.0% |
| !! | TATCGCTGATTAATAGAATT+TGG | + | chr5.1:3281822-3281841 | MS.gene024661:intron | 25.0% |
| !! | TTTAGATGATTTTTGATCGT+CGG | + | chr5.1:3285347-3285366 | MS.gene024661:intron | 25.0% |
| !! | TTTTATTAACCACATCATCT+TGG | - | chr5.1:3283248-3283267 | None:intergenic | 25.0% |
| !! | TTTTCTAACTTGAAAAATGG+TGG | + | chr5.1:3283133-3283152 | MS.gene024661:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr5.1:3282886-3282905 | None:intergenic | 25.0% |
| !! | TTTTGTGATGAATAGAGTAA+AGG | + | chr5.1:3284951-3284970 | MS.gene024661:intron | 25.0% |
| !!! | ACACTTAGTTTTCATTGATT+TGG | + | chr5.1:3281936-3281955 | MS.gene024661:intron | 25.0% |
| !!! | ACTGTTTCTATAGTTGATTA+AGG | + | chr5.1:3284492-3284511 | MS.gene024661:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr5.1:3282751-3282770 | MS.gene024661:intron | 25.0% |
| AAAAGTTAAGAATGAAACGC+AGG | - | chr5.1:3285049-3285068 | None:intergenic | 30.0% | |
| AAAATCAGGTAAACAACTAC+AGG | - | chr5.1:3283382-3283401 | None:intergenic | 30.0% | |
| AATATTGAGAAATGAAGTGC+GGG | - | chr5.1:3285093-3285112 | None:intergenic | 30.0% | |
| AATGAAATACTTGAGAGTTG+AGG | + | chr5.1:3284852-3284871 | MS.gene024661:intron | 30.0% | |
| ACGATCTAATAAGCAAAACA+TGG | - | chr5.1:3281088-3281107 | None:intergenic | 30.0% | |
| AGATTTAGAGGTCAATGAAT+TGG | + | chr5.1:3282905-3282924 | MS.gene024661:intron | 30.0% | |
| AGGAAAAGACATGGATTTAT+AGG | + | chr5.1:3285448-3285467 | MS.gene024661:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr5.1:3282412-3282431 | None:intergenic | 30.0% | |
| ATCAATTTCTGCATATGTGT+TGG | + | chr5.1:3285389-3285408 | MS.gene024661:intron | 30.0% | |
| CATTTAGGAACTGTATAAAG+GGG | + | chr5.1:3284905-3284924 | MS.gene024661:intron | 30.0% | |
| CGGTATTTATATAGTGTGTT+TGG | + | chr5.1:3285557-3285576 | MS.gene024661:intron | 30.0% | |
| CTTACACAAATACTAAAACC+CGG | + | chr5.1:3285537-3285556 | MS.gene024661:intron | 30.0% | |
| GATCCAACTATTGTAATTGA+AGG | - | chr5.1:3281606-3281625 | None:intergenic | 30.0% | |
| GCAATCTATTCTGTAATTGA+AGG | - | chr5.1:3283462-3283481 | None:intergenic | 30.0% | |
| GCATTTAGGAACTGTATAAA+GGG | + | chr5.1:3284904-3284923 | MS.gene024661:intron | 30.0% | |
| GGAAAAGACATGGATTTATA+GGG | + | chr5.1:3285449-3285468 | MS.gene024661:intron | 30.0% | |
| TACAATTGTTTGCAATTGCT+TGG | + | chr5.1:3281680-3281699 | MS.gene024661:intron | 30.0% | |
| TATGACTTCTAATCAAACCA+AGG | - | chr5.1:3285685-3285704 | None:intergenic | 30.0% | |
| TATTCCAAGTAGACTTAAGA+AGG | - | chr5.1:3283878-3283897 | None:intergenic | 30.0% | |
| TCAATTACAGAATAGATTGC+AGG | + | chr5.1:3283462-3283481 | MS.gene024661:intron | 30.0% | |
| TCTAAAAGATCTCGTTATTC+AGG | + | chr5.1:3283332-3283351 | MS.gene024661:CDS | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr5.1:3282818-3282837 | MS.gene024661:intron | 30.0% | |
| TGTCCTTCAATTACAATAGT+TGG | + | chr5.1:3281600-3281619 | MS.gene024661:intron | 30.0% | |
| TTAACAAACAAAAGAGGGAA+AGG | - | chr5.1:3285232-3285251 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr5.1:3282415-3282434 | MS.gene024661:intron | 30.0% | |
| TTACTTTGTGTATGGAAACT+TGG | + | chr5.1:3284031-3284050 | MS.gene024661:intron | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | chr5.1:3282817-3282836 | None:intergenic | 30.0% | |
| TTTAACTGTAACATTACCAG+TGG | - | chr5.1:3284276-3284295 | None:intergenic | 30.0% | |
| ! | ATAAATTTTCCTCCAAACCT+TGG | + | chr5.1:3285665-3285684 | MS.gene024661:intron | 30.0% |
| ! | ATTTTGTTAGGTTTCTTTGG+GGG | - | chr5.1:3283954-3283973 | None:intergenic | 30.0% |
| ! | GAATAACGAGATCTTTTAGA+AGG | - | chr5.1:3283332-3283351 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr5.1:3282898-3282917 | None:intergenic | 30.0% |
| ! | GATCTTTTCTCATAGATCAT+TGG | + | chr5.1:3281765-3281784 | MS.gene024661:intron | 30.0% |
| ! | GTAGATTTTCCCATAACAAT+AGG | + | chr5.1:3282099-3282118 | MS.gene024661:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.1:3282876-3282895 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr5.1:3282747-3282766 | None:intergenic | 30.0% |
| ! | TTTTGTACACATGATGATCA+CGG | - | chr5.1:3283308-3283327 | None:intergenic | 30.0% |
| !! | TATTTGTTATTCTTCAGCTC+TGG | + | chr5.1:3284534-3284553 | MS.gene024661:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr5.1:3281942-3281961 | MS.gene024661:intron | 30.0% |
| !!! | GTATTTTACAGAGTTTGTTG+AGG | + | chr5.1:3284071-3284090 | MS.gene024661:intron | 30.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr5.1:3282549-3282568 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr5.1:3282821-3282840 | MS.gene024661:intron | 35.0% | |
| ACTGATGTGTCTAATGTCAT+GGG | + | chr5.1:3283802-3283821 | MS.gene024661:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr5.1:3282740-3282759 | MS.gene024661:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr5.1:3282553-3282572 | MS.gene024661:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr5.1:3282400-3282419 | MS.gene024661:intron | 35.0% | |
| CATCCAAAACGAGTTTACTT+TGG | - | chr5.1:3281553-3281572 | None:intergenic | 35.0% | |
| CTTCTAATCAAACCAAGGTT+TGG | - | chr5.1:3285680-3285699 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr5.1:3282765-3282784 | MS.gene024661:intron | 35.0% | |
| GAAGTGATTTACTTCTTCAG+CGG | - | chr5.1:3280992-3281011 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr5.1:3282413-3282432 | None:intergenic | 35.0% | |
| GGCATTTAGGAACTGTATAA+AGG | + | chr5.1:3284903-3284922 | MS.gene024661:intron | 35.0% | |
| GGTTGTGGTATTTAGGTATA+GGG | + | chr5.1:3283497-3283516 | MS.gene024661:intron | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr5.1:3282414-3282433 | MS.gene024661:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr5.1:3282411-3282430 | None:intergenic | 35.0% | |
| TCTTCAATGTTGCAAAACGT+TGG | + | chr5.1:3284816-3284835 | MS.gene024661:intron | 35.0% | |
| TGAGAGTTTAGGAAAAGACA+TGG | + | chr5.1:3285439-3285458 | MS.gene024661:intron | 35.0% | |
| TGATCTTTGATAGAACACTG+TGG | + | chr5.1:3282937-3282956 | MS.gene024661:intron | 35.0% | |
| TGGAATGTAACTTCAGCAAA+AGG | + | chr5.1:3282340-3282359 | MS.gene024661:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr5.1:3282760-3282779 | MS.gene024661:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr5.1:3282540-3282559 | MS.gene024661:intron | 35.0% |
| ! | CATCCAAAGTAAACTCGTTT+TGG | + | chr5.1:3281547-3281566 | MS.gene024661:intron | 35.0% |
| ! | CATGCACTTCGAATATTTTC+AGG | - | chr5.1:3285513-3285532 | None:intergenic | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr5.1:3282207-3282226 | None:intergenic | 35.0% |
| !! | AAGAGAAGCAAGTTGATGTT+CGG | + | chr5.1:3281211-3281230 | MS.gene024661:CDS | 35.0% |
| !! | AATCTAGCTCTGTTAGTCAA+GGG | + | chr5.1:3284372-3284391 | MS.gene024661:intron | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr5.1:3282031-3282050 | None:intergenic | 35.0% |
| !! | GAATTACGCTGTTTTGTTGT+AGG | + | chr5.1:3281119-3281138 | MS.gene024661:intron | 35.0% |
| !! | TGTGCTACTTACTTTGTGTA+TGG | + | chr5.1:3284023-3284042 | MS.gene024661:intron | 35.0% |
| !! | TTACATGTGGGAGTTTGTTA+CGG | - | chr5.1:3284635-3284654 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr5.1:3282442-3282461 | None:intergenic | 35.0% |
| !!! | GTAAGACTTTTTTATCCGTC+CGG | - | chr5.1:3281918-3281937 | None:intergenic | 35.0% |
| !!! | TTTAGTTTTGGATGTGCTGA+CGG | + | chr5.1:3282161-3282180 | MS.gene024661:intron | 35.0% |
| AAATACACTTGATGCGCGTT+TGG | + | chr5.1:3284599-3284618 | MS.gene024661:CDS | 40.0% | |
| AACATTACCAGTGGAGATCA+TGG | - | chr5.1:3284267-3284286 | None:intergenic | 40.0% | |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr5.1:3282348-3282367 | MS.gene024661:intron | 40.0% | |
| AAGAACCTTCTGTCCTATTG+AGG | + | chr5.1:3284098-3284117 | MS.gene024661:CDS | 40.0% | |
| AAGGCCTTCTTAAGTCTACT+TGG | + | chr5.1:3283871-3283890 | MS.gene024661:intron | 40.0% | |
| ACAAAAGAGGGAAAGGAAGT+TGG | - | chr5.1:3285225-3285244 | None:intergenic | 40.0% | |
| ACATTACCAGTGGAGATCAT+GGG | - | chr5.1:3284266-3284285 | None:intergenic | 40.0% | |
| ACCAGAGATCGTTGTTGATA+AGG | + | chr5.1:3284204-3284223 | MS.gene024661:CDS | 40.0% | |
| ACCATTGGTGTGTCAGTTAA+GGG | - | chr5.1:3283761-3283780 | None:intergenic | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr5.1:3282349-3282368 | MS.gene024661:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | chr5.1:3282688-3282707 | MS.gene024661:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr5.1:3282038-3282057 | MS.gene024661:intron | 40.0% | |
| AGGAGAGTCAGGTTAAAAGA+GGG | + | chr5.1:3282841-3282860 | MS.gene024661:intron | 40.0% | |
| AGGTCAATTATGCACTGTGA+GGG | + | chr5.1:3284872-3284891 | MS.gene024661:intron | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr5.1:3282111-3282130 | MS.gene024661:intron | 40.0% | |
| ATCCATTATGCCGGATTTCT+AGG | + | chr5.1:3284330-3284349 | MS.gene024661:intron | 40.0% | |
| ATCTCCAACTTTCACCTTCA+AGG | - | chr5.1:3282379-3282398 | None:intergenic | 40.0% | |
| CAAAAGAGGGAAAGGAAGTT+GGG | - | chr5.1:3285224-3285243 | None:intergenic | 40.0% | |
| CAATATCGAGAAGTTGCAGT+TGG | + | chr5.1:3281146-3281165 | MS.gene024661:CDS | 40.0% | |
| CAATTCCCTACCTAGAAATC+CGG | - | chr5.1:3284343-3284362 | None:intergenic | 40.0% | |
| CACTGATGTGTCTAATGTCA+TGG | + | chr5.1:3283801-3283820 | MS.gene024661:intron | 40.0% | |
| CAGCGATATGTGATTAGTAC+TGG | - | chr5.1:3281810-3281829 | None:intergenic | 40.0% | |
| CATGACATTAGACACATCAG+TGG | - | chr5.1:3283803-3283822 | None:intergenic | 40.0% | |
| CCTTGTTGACCAGTAAAAAG+GGG | - | chr5.1:3283855-3283874 | None:intergenic | 40.0% | |
| CTAATCAAACCAAGGTTTGG+AGG | - | chr5.1:3285677-3285696 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr5.1:3282040-3282059 | MS.gene024661:intron | 40.0% | |
| CTATGCAGTTGAATGCTTCA+CGG | + | chr5.1:3283205-3283224 | MS.gene024661:CDS | 40.0% | |
| GAGAAAGGGTTGTGGTATTT+AGG | + | chr5.1:3283490-3283509 | MS.gene024661:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr5.1:3282039-3282058 | MS.gene024661:intron | 40.0% | |
| GCTTCTTGAAGCAATACCAT+TGG | - | chr5.1:3283776-3283795 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr5.1:3281982-3282001 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr5.1:3282435-3282454 | MS.gene024661:intron | 40.0% | |
| GGGTTGTGGTATTTAGGTAT+AGG | + | chr5.1:3283496-3283515 | MS.gene024661:intron | 40.0% | |
| GTTAAGGGGTTTGTAGTTAG+TGG | - | chr5.1:3283746-3283765 | None:intergenic | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr5.1:3282112-3282131 | MS.gene024661:intron | 40.0% | |
| TACCATTGGTGTGTCAGTTA+AGG | - | chr5.1:3283762-3283781 | None:intergenic | 40.0% | |
| TACCTAGAAATCCGGCATAA+TGG | - | chr5.1:3284335-3284354 | None:intergenic | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr5.1:3282041-3282060 | MS.gene024661:intron | 40.0% | |
| TCCTTATCAACAACGATCTC+TGG | - | chr5.1:3284208-3284227 | None:intergenic | 40.0% | |
| TCTACCTTGAAGGTGAAAGT+TGG | + | chr5.1:3282372-3282391 | MS.gene024661:intron | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr5.1:3282026-3282045 | MS.gene024661:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr5.1:3282111-3282130 | None:intergenic | 40.0% | |
| TTAGGAACTGTATAAAGGGG+CGG | + | chr5.1:3284908-3284927 | MS.gene024661:intron | 40.0% | |
| TTGGGCAGTAATGCTAAGTT+GGG | - | chr5.1:3285206-3285225 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr5.1:3282112-3282131 | None:intergenic | 40.0% | |
| ! | ACTGTCTTGTCGTTTGAGAA+AGG | - | chr5.1:3283682-3283701 | None:intergenic | 40.0% |
| ! | AGATTGCAGGACTTTGAGAA+AGG | + | chr5.1:3283475-3283494 | MS.gene024661:intron | 40.0% |
| ! | ATTATGCCGGATTTCTAGGT+AGG | + | chr5.1:3284334-3284353 | MS.gene024661:intron | 40.0% |
| ! | CGATATGTGATTAGTACTGG+CGG | - | chr5.1:3281807-3281826 | None:intergenic | 40.0% |
| ! | CTGTCTTGTCGTTTGAGAAA+GGG | - | chr5.1:3283681-3283700 | None:intergenic | 40.0% |
| ! | CTTTTCGCTCATACTCTTGA+CGG | - | chr5.1:3281194-3281213 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr5.1:3281974-3281993 | MS.gene024661:intron | 40.0% |
| ! | GATTGCAGGACTTTGAGAAA+GGG | + | chr5.1:3283476-3283495 | MS.gene024661:intron | 40.0% |
| ! | GCCTTGTTGACCAGTAAAAA+GGG | - | chr5.1:3283856-3283875 | None:intergenic | 40.0% |
| ! | TGTGTTTGGGTTCACAATAG+AGG | + | chr5.1:3285571-3285590 | MS.gene024661:intron | 40.0% |
| ! | TTATGCCGGATTTCTAGGTA+GGG | + | chr5.1:3284335-3284354 | MS.gene024661:intron | 40.0% |
| ! | TTGTTATTCTTCAGCTCTGG+AGG | + | chr5.1:3284537-3284556 | MS.gene024661:intron | 40.0% |
| !! | ACTCGTTTTGGATGCTTTGT+TGG | + | chr5.1:3281559-3281578 | MS.gene024661:intron | 40.0% |
| !! | GAATCTAGCTCTGTTAGTCA+AGG | + | chr5.1:3284371-3284390 | MS.gene024661:intron | 40.0% |
| !! | GATATGTGATTAGTACTGGC+GGG | - | chr5.1:3281806-3281825 | None:intergenic | 40.0% |
| AAACTTCCTCTACCAAGTGC+AGG | - | chr5.1:3284138-3284157 | None:intergenic | 45.0% | |
| AACTGTATAAAGGGGCGGAA+CGG | + | chr5.1:3284913-3284932 | MS.gene024661:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr5.1:3282715-3282734 | MS.gene024661:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr5.1:3282587-3282606 | MS.gene024661:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.1:3282830-3282849 | MS.gene024661:intron | 45.0% | |
| AGGTATAGGGCTATGAAGCA+CGG | + | chr5.1:3283510-3283529 | MS.gene024661:intron | 45.0% | |
| AGTCAGGTTAAAAGAGGGAG+AGG | + | chr5.1:3282846-3282865 | MS.gene024661:intron | 45.0% | |
| ATGCATTGTGCAAGTGGTTC+GGG | + | chr5.1:3285412-3285431 | MS.gene024661:intron | 45.0% | |
| CACATTCAAGAGTTCCTTGG+CGG | - | chr5.1:3283283-3283302 | None:intergenic | 45.0% | |
| CATTACCAGTGGAGATCATG+GGG | - | chr5.1:3284265-3284284 | None:intergenic | 45.0% | |
| CCATTGGTGTGTCAGTTAAG+GGG | - | chr5.1:3283760-3283779 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr5.1:3282635-3282654 | MS.gene024661:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr5.1:3282632-3282651 | None:intergenic | 45.0% | |
| CTATCGGACAACAGTCAAAC+CGG | + | chr5.1:3282569-3282588 | MS.gene024661:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr5.1:3282520-3282539 | None:intergenic | 45.0% | |
| CTTCTGTCCTATTGAGGTGT+CGG | + | chr5.1:3284104-3284123 | MS.gene024661:CDS | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr5.1:3282714-3282733 | MS.gene024661:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.1:3282840-3282859 | MS.gene024661:intron | 45.0% | |
| GAGGTCAATTATGCACTGTG+AGG | + | chr5.1:3284871-3284890 | MS.gene024661:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | + | chr5.1:3282677-3282696 | MS.gene024661:intron | 45.0% | |
| GATGCATTGTGCAAGTGGTT+CGG | + | chr5.1:3285411-3285430 | MS.gene024661:intron | 45.0% | |
| GCTAGAAGCAATCTGAGCAA+TGG | - | chr5.1:3285018-3285037 | None:intergenic | 45.0% | |
| GCTCACATTCAAGAGTTCCT+TGG | - | chr5.1:3283286-3283305 | None:intergenic | 45.0% | |
| GTAAAAAGGGGAAGAGAAGC+AGG | - | chr5.1:3283843-3283862 | None:intergenic | 45.0% | |
| GTACACCATCGTATTCAAGC+CGG | + | chr5.1:3282474-3282493 | MS.gene024661:intron | 45.0% | |
| GTCAAACCGGCAATGTTGTA+TGG | + | chr5.1:3282582-3282601 | MS.gene024661:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | chr5.1:3282682-3282701 | MS.gene024661:intron | 45.0% | |
| GTTGAATGCTTCACGGTTGA+AGG | + | chr5.1:3283212-3283231 | MS.gene024661:CDS | 45.0% | |
| GTTGGGCAGTAATGCTAAGT+TGG | - | chr5.1:3285207-3285226 | None:intergenic | 45.0% | |
| TAAACGGGAAGCTAGAGACT+TGG | + | chr5.1:3282262-3282281 | MS.gene024661:intron | 45.0% | |
| TACACCATCGTATTCAAGCC+GGG | + | chr5.1:3282475-3282494 | MS.gene024661:intron | 45.0% | |
| TAGAAGCAAGACGGAGTACA+TGG | + | chr5.1:3282320-3282339 | MS.gene024661:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr5.1:3282591-3282610 | None:intergenic | 45.0% | |
| TCTCTCGGGTCTAACTTGAT+TGG | + | chr5.1:3284407-3284426 | MS.gene024661:intron | 45.0% | |
| TCTTCAAGCCCAAGATGATG+TGG | + | chr5.1:3283236-3283255 | MS.gene024661:CDS | 45.0% | |
| TCTTCTCCATTTCAACCACC+CGG | - | chr5.1:3282496-3282515 | None:intergenic | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr5.1:3282713-3282732 | MS.gene024661:intron | 45.0% | |
| TGAGAAAGGGCTGTGGTATA+GGG | - | chr5.1:3283668-3283687 | None:intergenic | 45.0% | |
| TGGGCAGTAATGCTAAGTTG+GGG | - | chr5.1:3285205-3285224 | None:intergenic | 45.0% | |
| TGGTATAGGGCTATGAAGCA+CGG | - | chr5.1:3283655-3283674 | None:intergenic | 45.0% | |
| TGTTGGATGCATTGTGCAAG+TGG | + | chr5.1:3285406-3285425 | MS.gene024661:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr5.1:3282595-3282614 | MS.gene024661:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr5.1:3282501-3282520 | MS.gene024661:intron | 45.0% | |
| TTGAGAAAGGGCTGTGGTAT+AGG | - | chr5.1:3283669-3283688 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.1:3282986-3283005 | None:intergenic | 45.0% |
| ! | ACTAGTGTGATGATGCAGGA+TGG | + | chr5.1:3282069-3282088 | MS.gene024661:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr5.1:3281984-3282003 | MS.gene024661:intron | 45.0% |
| ! | AGGACTTTGAGAAAGGGTTG+TGG | + | chr5.1:3283482-3283501 | MS.gene024661:intron | 45.0% |
| ! | AGTTGGGGGCGTATCTATTT+AGG | - | chr5.1:3285190-3285209 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.1:3282987-3283006 | None:intergenic | 45.0% |
| ! | CCCCTTTTTACTGGTCAACA+AGG | + | chr5.1:3283852-3283871 | MS.gene024661:intron | 45.0% |
| ! | CGGAACGGACTTAAGGATTA+AGG | + | chr5.1:3284928-3284947 | MS.gene024661:intron | 45.0% |
| ! | CTAGTGTGATGATGCAGGAT+GGG | + | chr5.1:3282070-3282089 | MS.gene024661:intron | 45.0% |
| ! | GCACTTGGTAGAGGAAGTTT+TGG | + | chr5.1:3284138-3284157 | MS.gene024661:CDS | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr5.1:3282222-3282241 | MS.gene024661:intron | 45.0% |
| ! | GCTTCTCTTCCCCTTTTTAC+TGG | + | chr5.1:3283843-3283862 | MS.gene024661:intron | 45.0% |
| ! | GTTAGGTTTCTTTGGGGGAA+GGG | - | chr5.1:3283949-3283968 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr5.1:3282596-3282615 | MS.gene024661:intron | 45.0% |
| ! | TAGTGTGATGATGCAGGATG+GGG | + | chr5.1:3282071-3282090 | MS.gene024661:intron | 45.0% |
| ! | TGCTCAGGAGTATGCTGAAA+AGG | + | chr5.1:3284168-3284187 | MS.gene024661:CDS | 45.0% |
| ! | TGTTAGGTTTCTTTGGGGGA+AGG | - | chr5.1:3283950-3283969 | None:intergenic | 45.0% |
| ! | TTAGGTTTCTTTGGGGGAAG+GGG | - | chr5.1:3283948-3283967 | None:intergenic | 45.0% |
| ! | TTCGACTAGTGTGATGATGC+AGG | + | chr5.1:3282065-3282084 | MS.gene024661:intron | 45.0% |
| !! | CGACAGATGACGCTCTAAAA+AGG | - | chr5.1:3285289-3285308 | None:intergenic | 45.0% |
| !! | GATCTCGTTGGCTTTCTCTT+CGG | - | chr5.1:3280962-3280981 | None:intergenic | 45.0% |
| !! | GGCCTTGTTGACCAGTAAAA+AGG | - | chr5.1:3283857-3283876 | None:intergenic | 45.0% |
| !! | GTGGTATTGGCTTCTCATGA+TGG | + | chr5.1:3284561-3284580 | MS.gene024661:CDS | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr5.1:3282194-3282213 | None:intergenic | 45.0% |
| !!! | AGTTTTGGATTCAGCTGCTC+AGG | + | chr5.1:3284153-3284172 | MS.gene024661:CDS | 45.0% |
| !!! | TTTTAGAGCGTCATCTGTCG+CGG | + | chr5.1:3285289-3285308 | MS.gene024661:intron | 45.0% |
| AAGCCCCCTCATACATATCC+TGG | - | chr5.1:3282047-3282066 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr5.1:3282131-3282150 | None:intergenic | 50.0% | |
| AATGAAAGAGTCTGCCGCCA+AGG | + | chr5.1:3283266-3283285 | MS.gene024661:CDS | 50.0% | |
| ACAATCCCCATGATCTCCAC+TGG | + | chr5.1:3284257-3284276 | MS.gene024661:CDS | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+AGG | - | chr5.1:3282317-3282336 | None:intergenic | 50.0% | |
| AGCAAATCCAGCAGATGGTG+CGG | + | chr5.1:3280920-3280939 | MS.gene024661:CDS | 50.0% | |
| AGCGGAAACAGAGATCTCGT+TGG | - | chr5.1:3280974-3280993 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr5.1:3282663-3282682 | MS.gene024661:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr5.1:3282247-3282266 | MS.gene024661:intron | 50.0% | |
| ATCATGGGGATTGTGATGGC+TGG | - | chr5.1:3284251-3284270 | None:intergenic | 50.0% | |
| ATGAAGCACGGGCAAAGACA+CGG | + | chr5.1:3283522-3283541 | MS.gene024661:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr5.1:3282716-3282735 | MS.gene024661:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.1:3282985-3283004 | MS.gene024661:intron | 50.0% | |
| CCCCTTAACTGACACACCAA+TGG | + | chr5.1:3283757-3283776 | MS.gene024661:intron | 50.0% | |
| CCTCTTTCCGACACCTCAAT+AGG | - | chr5.1:3284114-3284133 | None:intergenic | 50.0% | |
| CGACACCTCAATAGGACAGA+AGG | - | chr5.1:3284106-3284125 | None:intergenic | 50.0% | |
| CGAGAAGTTGCAGTTGGTTG+AGG | + | chr5.1:3281152-3281171 | MS.gene024661:CDS | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr5.1:3281885-3281904 | MS.gene024661:intron | 50.0% | |
| CTCCAAGCAAATCCAGCAGA+TGG | + | chr5.1:3280915-3280934 | MS.gene024661:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.1:3282982-3283001 | None:intergenic | 50.0% | |
| CTTGTCCAAAGAGCTGCTTG+CGG | - | chr5.1:3285776-3285795 | None:intergenic | 50.0% | |
| CTTTCTCTTCGGCTTCTTGG+CGG | - | chr5.1:3280951-3280970 | None:intergenic | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr5.1:3281996-3282015 | MS.gene024661:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTGA+AGG | + | chr5.1:3282362-3282381 | MS.gene024661:intron | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr5.1:3282246-3282265 | MS.gene024661:intron | 50.0% | |
| GCTCAGATTGCTTCTAGCAC+TGG | + | chr5.1:3285020-3285039 | MS.gene024661:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr5.1:3281995-3282014 | MS.gene024661:intron | 50.0% | |
| GGAGATCATGGGGATTGTGA+TGG | - | chr5.1:3284255-3284274 | None:intergenic | 50.0% | |
| GGGAAGAGAAGCAGGATGAT+AGG | - | chr5.1:3283835-3283854 | None:intergenic | 50.0% | |
| GGTATAGGGCTATGAAGCAC+GGG | + | chr5.1:3283511-3283530 | MS.gene024661:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr5.1:3282721-3282740 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr5.1:3283644-3283663 | None:intergenic | 50.0% | |
| TCATGGGGATTGTGATGGCT+GGG | - | chr5.1:3284250-3284269 | None:intergenic | 50.0% | |
| TGAAGTGCGGGTACTACTCA+AGG | - | chr5.1:3285081-3285100 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr5.1:3281994-3282013 | MS.gene024661:intron | 50.0% | |
| TGGCTTTCTCTTCGGCTTCT+TGG | - | chr5.1:3280954-3280973 | None:intergenic | 50.0% | |
| TTCAAGCCGGGTGGTTGAAA+TGG | + | chr5.1:3282487-3282506 | MS.gene024661:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr5.1:3282643-3282662 | MS.gene024661:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr5.1:3282285-3282304 | MS.gene024661:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr5.1:3282233-3282252 | MS.gene024661:intron | 50.0% |
| ! | ATTGTGCAAGTGGTTCGGGT+GGG | + | chr5.1:3285416-3285435 | MS.gene024661:intron | 50.0% |
| ! | CACCATCTGCTGGATTTGCT+TGG | - | chr5.1:3280920-3280939 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.1:3282988-3283007 | None:intergenic | 50.0% |
| ! | GGGCAGTAATGCTAAGTTGG+GGG | - | chr5.1:3285204-3285223 | None:intergenic | 50.0% |
| ! | GGGGGCGTATCTATTTAGGA+AGG | - | chr5.1:3285186-3285205 | None:intergenic | 50.0% |
| ! | TAGGTTTCTTTGGGGGAAGG+GGG | - | chr5.1:3283947-3283966 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr5.1:3282232-3282251 | MS.gene024661:intron | 50.0% |
| ! | TGTCGTTTGAGAAAGGGCTG+TGG | - | chr5.1:3283675-3283694 | None:intergenic | 50.0% |
| !! | ATTCTTCAGCTCTGGAGGTG+TGG | + | chr5.1:3284542-3284561 | MS.gene024661:intron | 50.0% |
| !! | CCTATTGAGGTGTCGGAAAG+AGG | + | chr5.1:3284111-3284130 | MS.gene024661:CDS | 50.0% |
| !! | GGCTTGCATCTAGTTCTCTC+GGG | + | chr5.1:3284393-3284412 | MS.gene024661:intron | 50.0% |
| !! | GGGCTTGCATCTAGTTCTCT+CGG | + | chr5.1:3284392-3284411 | MS.gene024661:intron | 50.0% |
| ACCATCGTATTCAAGCCGGG+TGG | + | chr5.1:3282478-3282497 | MS.gene024661:intron | 55.0% | |
| ACGGGAAGCTAGAGACTTGG+AGG | + | chr5.1:3282265-3282284 | MS.gene024661:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.1:3282974-3282993 | None:intergenic | 55.0% | |
| AGAGGACCTGCACTTGGTAG+AGG | + | chr5.1:3284129-3284148 | MS.gene024661:CDS | 55.0% | |
| ATGGGGATTGTGATGGCTGG+GGG | - | chr5.1:3284248-3284267 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.1:3282973-3282992 | MS.gene024661:intron | 55.0% | |
| CAGATCCGCAAGCAGCTCTT+TGG | + | chr5.1:3285768-3285787 | MS.gene024661:intron | 55.0% | |
| CATGGGGATTGTGATGGCTG+GGG | - | chr5.1:3284249-3284268 | None:intergenic | 55.0% | |
| CCGCCTGAGTAGAAGCAAGA+CGG | + | chr5.1:3282311-3282330 | MS.gene024661:intron | 55.0% | |
| CCGTCTTGCTTCTACTCAGG+CGG | - | chr5.1:3282314-3282333 | None:intergenic | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr5.1:3282004-3282023 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.1:3282980-3282999 | MS.gene024661:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr5.1:3282655-3282674 | MS.gene024661:intron | 55.0% | |
| GCGGAAGCCATACGCTTCTA+AGG | - | chr5.1:3282295-3282314 | None:intergenic | 55.0% | |
| GTTCGGGTGGGTGAGAGTTT+AGG | + | chr5.1:3285428-3285447 | MS.gene024661:intron | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr5.1:3282005-3282024 | None:intergenic | 55.0% | |
| TCGGAAAGAGGACCTGCACT+TGG | + | chr5.1:3284123-3284142 | MS.gene024661:CDS | 55.0% | |
| TGAAGCACGGGCAAAGACAC+GGG | + | chr5.1:3283523-3283542 | MS.gene024661:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.1:3282974-3282993 | MS.gene024661:intron | 55.0% | |
| ! | AAAGGGGCGGAACGGACTTA+AGG | + | chr5.1:3284921-3284940 | MS.gene024661:intron | 55.0% |
| ! | ACCACCCGGCTTGAATACGA+TGG | - | chr5.1:3282482-3282501 | None:intergenic | 55.0% |
| ! | AGGTTTCTTTGGGGGAAGGG+GGG | - | chr5.1:3283946-3283965 | None:intergenic | 55.0% |
| ! | CATTGTGCAAGTGGTTCGGG+TGG | + | chr5.1:3285415-3285434 | MS.gene024661:intron | 55.0% |
| ! | TCCTCGGATTAGGTGTGTCC+CGG | - | chr5.1:3283628-3283647 | None:intergenic | 55.0% |
| !! | CAGCTCTGGAGGTGTGGTAT+TGG | + | chr5.1:3284548-3284567 | MS.gene024661:intron | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr5.1:3282599-3282618 | MS.gene024661:intron | 55.0% |
| ACCGGGACACACCTAATCCG+AGG | + | chr5.1:3283624-3283643 | MS.gene024661:intron | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr5.1:3282001-3282020 | MS.gene024661:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr5.1:3283638-3283657 | None:intergenic | 60.0% | |
| GGATGAACCGCACCATCTGC+TGG | - | chr5.1:3280930-3280949 | None:intergenic | 60.0% | |
| ! | CGTGATGGAGCGATACCGGA+CGG | + | chr5.1:3281900-3281919 | MS.gene024661:intron | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr5.1:3282236-3282255 | MS.gene024661:intron | 60.0% |
| ! | GACGCGTGATGGAGCGATAC+CGG | + | chr5.1:3281896-3281915 | MS.gene024661:intron | 60.0% |
| ! | GGTTTCTTTGGGGGAAGGGG+GGG | - | chr5.1:3283945-3283964 | None:intergenic | 60.0% |
| ! | TAGAGCGTCATCTGTCGCGG+TGG | + | chr5.1:3285292-3285311 | MS.gene024661:intron | 60.0% |
| ACCGACGCGTGTCTGACACC+GGG | + | chr5.1:3283607-3283626 | MS.gene024661:intron | 65.0% | |
| CACCGACGCGTGTCTGACAC+CGG | + | chr5.1:3283606-3283625 | MS.gene024661:intron | 65.0% | |
| GGATTGTGATGGCTGGGGGC+AGG | - | chr5.1:3284244-3284263 | None:intergenic | 65.0% | |
| TTGTGATGGCTGGGGGCAGG+TGG | - | chr5.1:3284241-3284260 | None:intergenic | 65.0% | |
| ! | TCCCGGTGTCAGACACGCGT+CGG | - | chr5.1:3283611-3283630 | None:intergenic | 65.0% |
| ! | TTCTTTGGGGGAAGGGGGGG+TGG | - | chr5.1:3283942-3283961 | None:intergenic | 65.0% |
| !! | GAAGGGGGGGTGGACTGTGG+AGG | - | chr5.1:3283932-3283951 | None:intergenic | 70.0% |
| !! | GGGGAAGGGGGGGTGGACTG+TGG | - | chr5.1:3283935-3283954 | None:intergenic | 75.0% |
| !! | GGGGGGGTGGACTGTGGAGG+CGG | - | chr5.1:3283929-3283948 | None:intergenic | 75.0% |
| !! | GGGGGGTGGACTGTGGAGGC+GGG | - | chr5.1:3283928-3283947 | None:intergenic | 75.0% |
| !! | GGGGGTGGACTGTGGAGGCG+GGG | - | chr5.1:3283927-3283946 | None:intergenic | 75.0% |
| !! | GGGGTGGACTGTGGAGGCGG+GGG | - | chr5.1:3283926-3283945 | None:intergenic | 75.0% |
| !! | GGGTGGACTGTGGAGGCGGG+GGG | - | chr5.1:3283925-3283944 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 3280898 | 3285806 | 3280898 | ID=MS.gene024661 |
| chr5.1 | mRNA | 3280898 | 3285806 | 3280898 | ID=MS.gene024661.t1;Parent=MS.gene024661 |
| chr5.1 | exon | 3280898 | 3280999 | 3280898 | ID=MS.gene024661.t1.exon1;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3280898 | 3280999 | 3280898 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| chr5.1 | exon | 3281141 | 3281241 | 3281141 | ID=MS.gene024661.t1.exon2;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3281141 | 3281241 | 3281141 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| chr5.1 | exon | 3283197 | 3283353 | 3283197 | ID=MS.gene024661.t1.exon3;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3283197 | 3283353 | 3283197 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| chr5.1 | exon | 3284082 | 3284278 | 3284082 | ID=MS.gene024661.t1.exon4;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3284082 | 3284278 | 3284082 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| chr5.1 | exon | 3284551 | 3284650 | 3284551 | ID=MS.gene024661.t1.exon5;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3284551 | 3284650 | 3284551 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| chr5.1 | exon | 3285771 | 3285806 | 3285771 | ID=MS.gene024661.t1.exon6;Parent=MS.gene024661.t1 |
| chr5.1 | CDS | 3285771 | 3285806 | 3285771 | ID=cds.MS.gene024661.t1;Parent=MS.gene024661.t1 |
| Gene Sequence |
| Protein sequence |
