Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072752.t1 | XP_003611036.1 | 98.3 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 1.90E-115 | 425.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072752.t1 | Q41396 | 79.9 | 229 | 45 | 1 | 1 | 229 | 1 | 228 | 3.8e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072752.t1 | B7FMK2 | 98.3 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 1.4e-115 | 425.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072752 | MS.gene44998 | PPI |
| MS.gene048900 | MS.gene072752 | PPI |
| MS.gene024661 | MS.gene072752 | PPI |
| MS.gene072752 | MS.gene06042 | PPI |
| MS.gene072752 | MS.gene22330 | PPI |
| MS.gene072752 | MS.gene87386 | PPI |
| MS.gene072752 | MS.gene55771 | PPI |
| MS.gene072752 | MS.gene003523 | PPI |
| MS.gene072752 | MS.gene52076 | PPI |
| MS.gene072752 | MS.gene91075 | PPI |
| MS.gene55771 | MS.gene072752 | PPI |
| MS.gene072752 | MS.gene011917 | PPI |
| MS.gene072752 | MS.gene90980 | PPI |
| MS.gene072752 | MS.gene21642 | PPI |
| MS.gene072752 | MS.gene28505 | PPI |
| MS.gene91075 | MS.gene072752 | PPI |
| MS.gene072752 | MS.gene057707 | PPI |
| MS.gene90980 | MS.gene072752 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072752.t1 | MTR_5g009720 | 98.261 | 230 | 4 | 0 | 1 | 230 | 1 | 230 | 3.94e-164 | 452 |
| MS.gene072752.t1 | MTR_8g099190 | 78.243 | 239 | 42 | 1 | 1 | 229 | 1 | 239 | 1.08e-132 | 373 |
| MS.gene072752.t1 | MTR_8g099190 | 74.502 | 251 | 42 | 2 | 1 | 229 | 1 | 251 | 6.22e-129 | 364 |
| MS.gene072752.t1 | MTR_8g099190 | 72.803 | 239 | 40 | 2 | 1 | 229 | 1 | 224 | 3.58e-118 | 336 |
| MS.gene072752.t1 | MTR_4g073800 | 71.818 | 220 | 60 | 1 | 1 | 218 | 1 | 220 | 1.01e-110 | 318 |
| MS.gene072752.t1 | MTR_8g099190 | 76.020 | 196 | 37 | 1 | 1 | 186 | 1 | 196 | 3.03e-103 | 298 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072752.t1 | AT4G11150 | 79.039 | 229 | 48 | 0 | 1 | 229 | 1 | 229 | 7.08e-132 | 371 |
| MS.gene072752.t1 | AT1G64200 | 76.170 | 235 | 50 | 1 | 1 | 229 | 1 | 235 | 9.22e-128 | 360 |
| MS.gene072752.t1 | AT1G64200 | 75.771 | 227 | 49 | 1 | 1 | 221 | 1 | 227 | 3.97e-122 | 346 |
| MS.gene072752.t1 | AT3G08560 | 70.175 | 228 | 66 | 1 | 1 | 226 | 1 | 228 | 1.55e-108 | 312 |
| MS.gene072752.t1 | AT1G64200 | 75.789 | 190 | 40 | 1 | 1 | 184 | 1 | 190 | 1.39e-98 | 285 |
Find 49 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCTTTCTCTTCGGCTTCT+TGG | 0.240421 | 5.3:-3582714 | None:intergenic |
| TCTAAAAGATCTCGTTATTC+AGG | 0.260442 | 5.3:+3585083 | MS.gene072752:CDS |
| GCACTTGGTAGAGGAAGTTT+TGG | 0.315846 | 5.3:+3585890 | MS.gene072752:CDS |
| CAGCTCTGGAGGTGTGGTAT+TGG | 0.325702 | 5.3:+3586300 | MS.gene072752:intron |
| ATCATGGGGATTGTGATGGC+TGG | 0.343640 | 5.3:-3586000 | None:intergenic |
| CAGATCCGCAAGCAGCTCTT+TGG | 0.350673 | 5.3:+3587527 | MS.gene072752:intron |
| TTTATTAACCACATCATCTT+GGG | 0.412688 | 5.3:-3584995 | None:intergenic |
| CCTCTTTCCGACACCTCAAT+AGG | 0.416620 | 5.3:-3585863 | None:intergenic |
| AAATACACTTGATGCGCGTT+TGG | 0.420715 | 5.3:+3586351 | MS.gene072752:CDS |
| GATCTCGTTGGCTTTCTCTT+CGG | 0.426517 | 5.3:-3582722 | None:intergenic |
| TCCTTATCAACAACGATCTC+TGG | 0.435488 | 5.3:-3585957 | None:intergenic |
| CACCATCTGCTGGATTTGCT+TGG | 0.437939 | 5.3:-3582680 | None:intergenic |
| GTTGAATGCTTCACGGTTGA+AGG | 0.443148 | 5.3:+3584963 | MS.gene072752:CDS |
| ACCAGAGATCGTTGTTGATA+AGG | 0.446783 | 5.3:+3585956 | MS.gene072752:CDS |
| TGCTCAGGAGTATGCTGAAA+AGG | 0.449579 | 5.3:+3585920 | MS.gene072752:CDS |
| CTTTCTCTTCGGCTTCTTGG+CGG | 0.452151 | 5.3:-3582711 | None:intergenic |
| GGATGAACCGCACCATCTGC+TGG | 0.455942 | 5.3:-3582690 | None:intergenic |
| CTATGCAGTTGAATGCTTCA+CGG | 0.456350 | 5.3:+3584956 | MS.gene072752:CDS |
| TCATGGGGATTGTGATGGCT+GGG | 0.459295 | 5.3:-3585999 | None:intergenic |
| TTACATGTGGGAGTTTGTTA+CGG | 0.463593 | 5.3:-3586384 | None:intergenic |
| CGAGAAGTTGCAGTTGGTTG+AGG | 0.469869 | 5.3:+3582915 | MS.gene072752:CDS |
| AACATTACCAGTGGAGATCA+TGG | 0.476950 | 5.3:-3586016 | None:intergenic |
| AAGAGAAGCAAGTTGATGTT+CGG | 0.494758 | 5.3:+3582974 | MS.gene072752:CDS |
| ATGGGGATTGTGATGGCTGG+GGG | 0.508306 | 5.3:-3585997 | None:intergenic |
| CCTATTGAGGTGTCGGAAAG+AGG | 0.513705 | 5.3:+3585863 | MS.gene072752:CDS |
| TTGTTATTCTTCAGCTCTGG+AGG | 0.520387 | 5.3:+3586289 | MS.gene072752:intron |
| AGAGGACCTGCACTTGGTAG+AGG | 0.521773 | 5.3:+3585881 | MS.gene072752:CDS |
| CAATATCGAGAAGTTGCAGT+TGG | 0.528790 | 5.3:+3582909 | MS.gene072752:CDS |
| GCTCACATTCAAGAGTTCCT+TGG | 0.530777 | 5.3:-3585034 | None:intergenic |
| CATGGGGATTGTGATGGCTG+GGG | 0.531144 | 5.3:-3585998 | None:intergenic |
| CACATTCAAGAGTTCCTTGG+CGG | 0.533307 | 5.3:-3585031 | None:intergenic |
| ATTCTTCAGCTCTGGAGGTG+TGG | 0.541669 | 5.3:+3586294 | MS.gene072752:intron |
| ACATTACCAGTGGAGATCAT+GGG | 0.551646 | 5.3:-3586015 | None:intergenic |
| CTTCTGTCCTATTGAGGTGT+CGG | 0.557410 | 5.3:+3585856 | MS.gene072752:CDS |
| AAGAACCTTCTGTCCTATTG+AGG | 0.558216 | 5.3:+3585850 | MS.gene072752:CDS |
| GTGGTATTGGCTTCTCATGA+TGG | 0.567055 | 5.3:+3586313 | MS.gene072752:CDS |
| AAACTTCCTCTACCAAGTGC+AGG | 0.570638 | 5.3:-3585887 | None:intergenic |
| AATGAAAGAGTCTGCCGCCA+AGG | 0.574070 | 5.3:+3585017 | MS.gene072752:CDS |
| CGACACCTCAATAGGACAGA+AGG | 0.579267 | 5.3:-3585855 | None:intergenic |
| ACAATCCCCATGATCTCCAC+TGG | 0.579484 | 5.3:+3586009 | MS.gene072752:CDS |
| TCGGAAAGAGGACCTGCACT+TGG | 0.588677 | 5.3:+3585875 | MS.gene072752:CDS |
| AGCGGAAACAGAGATCTCGT+TGG | 0.593299 | 5.3:-3582734 | None:intergenic |
| CTCCAAGCAAATCCAGCAGA+TGG | 0.599092 | 5.3:+3582678 | MS.gene072752:CDS |
| GAAGTGATTTACTTCTTCAG+CGG | 0.599607 | 5.3:-3582752 | None:intergenic |
| TCTTCAAGCCCAAGATGATG+TGG | 0.617482 | 5.3:+3584987 | MS.gene072752:CDS |
| CATTACCAGTGGAGATCATG+GGG | 0.626749 | 5.3:-3586014 | None:intergenic |
| AGCAAATCCAGCAGATGGTG+CGG | 0.627594 | 5.3:+3582683 | MS.gene072752:CDS |
| GGAGATCATGGGGATTGTGA+TGG | 0.645556 | 5.3:-3586004 | None:intergenic |
| CTTGTCCAAAGAGCTGCTTG+CGG | 0.716823 | 5.3:-3587532 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAAAAATATGTAAA+AGG | - | chr5.3:3583014-3583033 | None:intergenic | 10.0% |
| !! | AAAGATATAAATAATAAGAA+AGG | - | chr5.3:3585467-3585486 | None:intergenic | 10.0% |
| !! | ATACTAAATTCAAATATATT+CGG | - | chr5.3:3583393-3583412 | None:intergenic | 10.0% |
| !!! | TTATTTTCTCAAATTATTAT+CGG | - | chr5.3:3585302-3585321 | None:intergenic | 10.0% |
| !!! | TTTTTAGTAAAAAAACTATT+TGG | + | chr5.3:3587391-3587410 | MS.gene072752:intron | 10.0% |
| !! | AAAAAATTAACAAACAAAAG+AGG | - | chr5.3:3587000-3587019 | None:intergenic | 15.0% |
| !! | AAAAATTAACAAACAAAAGA+GGG | - | chr5.3:3586999-3587018 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr5.3:3583913-3583932 | None:intergenic | 15.0% |
| !! | AAAATATAATTGGAAAAATC+AGG | - | chr5.3:3585147-3585166 | None:intergenic | 15.0% |
| !! | AAACAAATATCTAACATAAA+TGG | - | chr5.3:3586483-3586502 | None:intergenic | 15.0% |
| !! | ATAACAAATAATACAATATC+AGG | - | chr5.3:3586276-3586295 | None:intergenic | 15.0% |
| !!! | AAATAACGAAAAATTTTGTT+AGG | - | chr5.3:3585717-3585736 | None:intergenic | 15.0% |
| !!! | GCATAGTTTTTTTTTTTTTT+GGG | + | chr5.3:3586447-3586466 | MS.gene072752:intron | 15.0% |
| !!! | GTTGTGATATTATATTTTTT+AGG | + | chr5.3:3586181-3586200 | MS.gene072752:intron | 15.0% |
| !!! | TGCATAGTTTTTTTTTTTTT+TGG | + | chr5.3:3586446-3586465 | MS.gene072752:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr5.3:3583912-3583931 | MS.gene072752:intron | 15.0% |
| !!! | TTTCCAATTATATTTTCAAT+AGG | + | chr5.3:3585151-3585170 | MS.gene072752:intron | 15.0% |
| !! | AAAGTACAAGTTATAATCAA+CGG | - | chr5.3:3586919-3586938 | None:intergenic | 20.0% |
| !! | ATCCAACTATTATAATTGAA+TGG | - | chr5.3:3583211-3583230 | None:intergenic | 20.0% |
| !! | CTTTCAATATTTGCAATATA+AGG | + | chr5.3:3586880-3586899 | MS.gene072752:intron | 20.0% |
| !! | GAAAAAGTGAAATTAAGAAA+TGG | - | chr5.3:3582786-3582805 | None:intergenic | 20.0% |
| !! | GAAACTTGGAATTAAATAAA+AGG | + | chr5.3:3585797-3585816 | MS.gene072752:intron | 20.0% |
| !! | GATCCTATTGAAAATATAAT+TGG | - | chr5.3:3585157-3585176 | None:intergenic | 20.0% |
| !! | GCATATTCTTATAAAATTCT+AGG | - | chr5.3:3585179-3585198 | None:intergenic | 20.0% |
| !! | TACTAAAAATCACATTTGAA+GGG | - | chr5.3:3587380-3587399 | None:intergenic | 20.0% |
| !! | TATAACAAAAACTTACATGT+GGG | - | chr5.3:3586399-3586418 | None:intergenic | 20.0% |
| !! | TCAATTATAATAGTTGGATT+TGG | + | chr5.3:3583212-3583231 | MS.gene072752:intron | 20.0% |
| !! | TTAATCAAGAACAGTTATTT+AGG | - | chr5.3:3586058-3586077 | None:intergenic | 20.0% |
| !! | TTACTAAAAATCACATTTGA+AGG | - | chr5.3:3587381-3587400 | None:intergenic | 20.0% |
| !! | TTATAACAAAAACTTACATG+TGG | - | chr5.3:3586400-3586419 | None:intergenic | 20.0% |
| !!! | AAAATTTTGTTAGGTTTCTT+TGG | - | chr5.3:3585708-3585727 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTAGGTTTCTTT+GGG | - | chr5.3:3585707-3585726 | None:intergenic | 20.0% |
| !!! | CATATAGTTTTGGATTTATT+TGG | + | chr5.3:3583147-3583166 | MS.gene072752:intron | 20.0% |
| !!! | CTACTTGGAATATAATTTTA+GGG | + | chr5.3:3585637-3585656 | MS.gene072752:intron | 20.0% |
| !!! | GGTCAGTTAAAATTTTAATA+TGG | + | chr5.3:3585104-3585123 | MS.gene072752:intron | 20.0% |
| !!! | TAAAACGTAGTTTTTATACT+AGG | + | chr5.3:3587465-3587484 | MS.gene072752:intron | 20.0% |
| !!! | TCAAAGTTTTCATATAGTTT+TGG | + | chr5.3:3583137-3583156 | MS.gene072752:intron | 20.0% |
| !!! | TCTACTTGGAATATAATTTT+AGG | + | chr5.3:3585636-3585655 | MS.gene072752:intron | 20.0% |
| !!! | TCTTTTTCTAACTTGAAAAA+TGG | + | chr5.3:3584881-3584900 | MS.gene072752:intron | 20.0% |
| !!! | TTGTTATTTACATATGTGAA+TGG | + | chr5.3:3583067-3583086 | MS.gene072752:intron | 20.0% |
| ! | AAACACACTATATAAATACC+GGG | - | chr5.3:3587320-3587339 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr5.3:3584656-3584675 | MS.gene072752:intron | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr5.3:3583906-3583925 | None:intergenic | 25.0% |
| ! | AATAATAAGAAAGGATGAGA+AGG | - | chr5.3:3585458-3585477 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr5.3:3583905-3583924 | None:intergenic | 25.0% |
| ! | AGTGAAATTAAGAAATGGAT+CGG | - | chr5.3:3582781-3582800 | None:intergenic | 25.0% |
| ! | ATAAATTAGTTGCATTGTAC+AGG | - | chr5.3:3587241-3587260 | None:intergenic | 25.0% |
| ! | ATTAAAACAATCCATTATGC+CGG | + | chr5.3:3586073-3586092 | MS.gene072752:intron | 25.0% |
| ! | ATTTAATCAGTCATCATACT+TGG | - | chr5.3:3583617-3583636 | None:intergenic | 25.0% |
| ! | ATTTGATCACAAAACTTGTA+TGG | + | chr5.3:3583043-3583062 | MS.gene072752:intron | 25.0% |
| ! | CAAACACACTATATAAATAC+CGG | - | chr5.3:3587321-3587340 | None:intergenic | 25.0% |
| ! | GGTATTTATATAGTGTGTTT+GGG | + | chr5.3:3587320-3587339 | MS.gene072752:intron | 25.0% |
| ! | GTATGATGACTGATTAAATT+TGG | + | chr5.3:3583618-3583637 | MS.gene072752:intron | 25.0% |
| ! | GTTCTATCAAAGATCATATT+TGG | - | chr5.3:3584696-3584715 | None:intergenic | 25.0% |
| ! | TAAATTAGTTGCATTGTACA+GGG | - | chr5.3:3587240-3587259 | None:intergenic | 25.0% |
| ! | TAATATTGAGAAATGAAGTG+CGG | - | chr5.3:3586856-3586875 | None:intergenic | 25.0% |
| ! | TATTGTTATGGGAAAATCTA+TGG | - | chr5.3:3583863-3583882 | None:intergenic | 25.0% |
| ! | TGCCATTCAATTATAATAGT+TGG | + | chr5.3:3583206-3583225 | MS.gene072752:intron | 25.0% |
| ! | TTAAAACTCACAGATACAAT+TGG | + | chr5.3:3583245-3583264 | MS.gene072752:intron | 25.0% |
| ! | TTTAGTGTAATCATATGTGT+TGG | + | chr5.3:3585327-3585346 | MS.gene072752:intron | 25.0% |
| ! | TTTATTAACCACATCATCTT+GGG | - | chr5.3:3584998-3585017 | None:intergenic | 25.0% |
| ! | TTTGTGATGAATAGAGTAAA+GGG | + | chr5.3:3586715-3586734 | MS.gene072752:intron | 25.0% |
| !! | AACTAGTAAATTTGAAACTC+AGG | - | chr5.3:3586221-3586240 | None:intergenic | 25.0% |
| !! | AATTTTGTTAGGTTTCTTTG+GGG | - | chr5.3:3585706-3585725 | None:intergenic | 25.0% |
| !! | ACTAGTAAATTTGAAACTCA+GGG | - | chr5.3:3586220-3586239 | None:intergenic | 25.0% |
| !! | ATAGATTTTCCCATAACAAT+AGG | + | chr5.3:3583862-3583881 | MS.gene072752:intron | 25.0% |
| !! | ATAGTTAGTTAACAGAGTTT+TGG | - | chr5.3:3586755-3586774 | None:intergenic | 25.0% |
| !! | TATCGCTGATTAATAGAATT+TGG | + | chr5.3:3583585-3583604 | MS.gene072752:intron | 25.0% |
| !! | TTTAGATGATTTTTGATCGT+CGG | + | chr5.3:3587109-3587128 | MS.gene072752:intron | 25.0% |
| !! | TTTTATTAACCACATCATCT+TGG | - | chr5.3:3584999-3585018 | None:intergenic | 25.0% |
| !! | TTTTCTAACTTGAAAAATGG+TGG | + | chr5.3:3584884-3584903 | MS.gene072752:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr5.3:3584649-3584668 | None:intergenic | 25.0% |
| !! | TTTTGTGATGAATAGAGTAA+AGG | + | chr5.3:3586714-3586733 | MS.gene072752:intron | 25.0% |
| !!! | ACACTTAGTTTTCATTGATT+TGG | + | chr5.3:3583699-3583718 | MS.gene072752:intron | 25.0% |
| !!! | ACTGTTTCTATAGTTGATTA+AGG | + | chr5.3:3586244-3586263 | MS.gene072752:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr5.3:3584514-3584533 | MS.gene072752:intron | 25.0% |
| AAAAGTTAAGAATGAAACGC+AGG | - | chr5.3:3586812-3586831 | None:intergenic | 30.0% | |
| AAAATCAGGTAAACAACTAC+AGG | - | chr5.3:3585133-3585152 | None:intergenic | 30.0% | |
| AATATTGAGAAATGAAGTGC+GGG | - | chr5.3:3586855-3586874 | None:intergenic | 30.0% | |
| AATGAAATACTTGAGAGTTG+AGG | + | chr5.3:3586605-3586624 | MS.gene072752:intron | 30.0% | |
| ACGATCTAATAAGCAAAACA+TGG | - | chr5.3:3582851-3582870 | None:intergenic | 30.0% | |
| AGATTTAGAGGTCAATGAAT+TGG | + | chr5.3:3584668-3584687 | MS.gene072752:intron | 30.0% | |
| AGGAAAAGACATGGATTTAT+AGG | + | chr5.3:3587210-3587229 | MS.gene072752:intron | 30.0% | |
| AGGAATTAGGAACTGTATAA+AGG | + | chr5.3:3586666-3586685 | MS.gene072752:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr5.3:3584175-3584194 | None:intergenic | 30.0% | |
| ATCAATTTCTGCATATGTGT+TGG | + | chr5.3:3587151-3587170 | MS.gene072752:intron | 30.0% | |
| CGGTATTTATATAGTGTGTT+TGG | + | chr5.3:3587319-3587338 | MS.gene072752:intron | 30.0% | |
| CTTACACAAATACTAAAACC+CGG | + | chr5.3:3587299-3587318 | MS.gene072752:intron | 30.0% | |
| GAATTAGGAACTGTATAAAG+GGG | + | chr5.3:3586668-3586687 | MS.gene072752:intron | 30.0% | |
| GATCCAACTATTGTAATTGA+AGG | - | chr5.3:3583369-3583388 | None:intergenic | 30.0% | |
| GCAATCTATTCTGTAATTGA+AGG | - | chr5.3:3585213-3585232 | None:intergenic | 30.0% | |
| GGAAAAGACATGGATTTATA+GGG | + | chr5.3:3587211-3587230 | MS.gene072752:intron | 30.0% | |
| GGAATTAGGAACTGTATAAA+GGG | + | chr5.3:3586667-3586686 | MS.gene072752:intron | 30.0% | |
| TACAATTGTTTGCAATTGCT+TGG | + | chr5.3:3583443-3583462 | MS.gene072752:intron | 30.0% | |
| TATGACTTCTAATCAAACCA+AGG | - | chr5.3:3587447-3587466 | None:intergenic | 30.0% | |
| TATTCCAAGTAGACTTAAGA+AGG | - | chr5.3:3585629-3585648 | None:intergenic | 30.0% | |
| TCAATTACAGAATAGATTGC+AGG | + | chr5.3:3585213-3585232 | MS.gene072752:intron | 30.0% | |
| TCTAAAAGATCTCGTTATTC+AGG | + | chr5.3:3585083-3585102 | MS.gene072752:CDS | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr5.3:3584581-3584600 | MS.gene072752:intron | 30.0% | |
| TGTCCTTCAATTACAATAGT+TGG | + | chr5.3:3583363-3583382 | MS.gene072752:intron | 30.0% | |
| TTAACAAACAAAAGAGGGAA+AGG | - | chr5.3:3586994-3587013 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr5.3:3584178-3584197 | MS.gene072752:intron | 30.0% | |
| TTACTTTGTGTATGGAAACT+TGG | + | chr5.3:3585783-3585802 | MS.gene072752:intron | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | chr5.3:3584580-3584599 | None:intergenic | 30.0% | |
| TTTAACTGTAACATTACCAG+TGG | - | chr5.3:3586028-3586047 | None:intergenic | 30.0% | |
| ! | ATAAATTTTCCTCCAAACCT+TGG | + | chr5.3:3587427-3587446 | MS.gene072752:intron | 30.0% |
| ! | ATTTTGTTAGGTTTCTTTGG+GGG | - | chr5.3:3585705-3585724 | None:intergenic | 30.0% |
| ! | GAATAACGAGATCTTTTAGA+AGG | - | chr5.3:3585083-3585102 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr5.3:3584661-3584680 | None:intergenic | 30.0% |
| ! | GATCTTTTCTCATAGATCAT+TGG | + | chr5.3:3583528-3583547 | MS.gene072752:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.3:3584639-3584658 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr5.3:3584510-3584529 | None:intergenic | 30.0% |
| ! | TTTTGTACACATGATGATCA+CGG | - | chr5.3:3585059-3585078 | None:intergenic | 30.0% |
| !! | TATTTGTTATTCTTCAGCTC+TGG | + | chr5.3:3586286-3586305 | MS.gene072752:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr5.3:3583705-3583724 | MS.gene072752:intron | 30.0% |
| !!! | GTATTTTACAGAGTTTGTTG+AGG | + | chr5.3:3585823-3585842 | MS.gene072752:intron | 30.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr5.3:3584312-3584331 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr5.3:3584584-3584603 | MS.gene072752:intron | 35.0% | |
| ACTGATGTGTCTAATGTCAT+GGG | + | chr5.3:3585553-3585572 | MS.gene072752:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr5.3:3584503-3584522 | MS.gene072752:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr5.3:3584316-3584335 | MS.gene072752:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr5.3:3584163-3584182 | MS.gene072752:intron | 35.0% | |
| CATCCAAAACGAGTTTACTT+TGG | - | chr5.3:3583316-3583335 | None:intergenic | 35.0% | |
| CTTCTAATCAAACCAAGGTT+TGG | - | chr5.3:3587442-3587461 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr5.3:3584528-3584547 | MS.gene072752:intron | 35.0% | |
| GAAGTGATTTACTTCTTCAG+CGG | - | chr5.3:3582755-3582774 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr5.3:3584176-3584195 | None:intergenic | 35.0% | |
| GGTTGTGGTATTTAGGTATA+GGG | + | chr5.3:3585248-3585267 | MS.gene072752:intron | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr5.3:3584177-3584196 | MS.gene072752:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr5.3:3584174-3584193 | None:intergenic | 35.0% | |
| TCTTCAATGTTGCAAAACGT+TGG | + | chr5.3:3586569-3586588 | MS.gene072752:intron | 35.0% | |
| TGAGAGTTTAGGAAAAGACA+TGG | + | chr5.3:3587201-3587220 | MS.gene072752:intron | 35.0% | |
| TGATCTTTGATAGAACACTG+TGG | + | chr5.3:3584700-3584719 | MS.gene072752:intron | 35.0% | |
| TGGAATGTAACTTCAGCAAA+AGG | + | chr5.3:3584103-3584122 | MS.gene072752:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr5.3:3584523-3584542 | MS.gene072752:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr5.3:3584303-3584322 | MS.gene072752:intron | 35.0% |
| ! | ACTGTCTTGTCGTTTAAGAA+AGG | - | chr5.3:3585433-3585452 | None:intergenic | 35.0% |
| ! | CATCCAAAGTAAACTCGTTT+TGG | + | chr5.3:3583310-3583329 | MS.gene072752:intron | 35.0% |
| ! | CATGCACTTCGAATATTTTC+AGG | - | chr5.3:3587275-3587294 | None:intergenic | 35.0% |
| ! | CTGTCTTGTCGTTTAAGAAA+GGG | - | chr5.3:3585432-3585451 | None:intergenic | 35.0% |
| !! | AAGAGAAGCAAGTTGATGTT+CGG | + | chr5.3:3582974-3582993 | MS.gene072752:CDS | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr5.3:3583794-3583813 | None:intergenic | 35.0% |
| !! | GAATTACGCTGTTTTGTTGT+AGG | + | chr5.3:3582882-3582901 | MS.gene072752:intron | 35.0% |
| !! | TGTGCTACTTACTTTGTGTA+TGG | + | chr5.3:3585775-3585794 | MS.gene072752:intron | 35.0% |
| !! | TTACATGTGGGAGTTTGTTA+CGG | - | chr5.3:3586387-3586406 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr5.3:3584205-3584224 | None:intergenic | 35.0% |
| !!! | GTAAGTCTTTTTTATCCGTC+CGG | - | chr5.3:3583681-3583700 | None:intergenic | 35.0% |
| !!! | TTTAGTTTTGGATGTGCTGA+CGG | + | chr5.3:3583924-3583943 | MS.gene072752:intron | 35.0% |
| AAATACACTTGATGCGCGTT+TGG | + | chr5.3:3586351-3586370 | MS.gene072752:CDS | 40.0% | |
| AACATTACCAGTGGAGATCA+TGG | - | chr5.3:3586019-3586038 | None:intergenic | 40.0% | |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr5.3:3584111-3584130 | MS.gene072752:intron | 40.0% | |
| AAGAACCTTCTGTCCTATTG+AGG | + | chr5.3:3585850-3585869 | MS.gene072752:CDS | 40.0% | |
| AAGGCCTTCTTAAGTCTACT+TGG | + | chr5.3:3585622-3585641 | MS.gene072752:intron | 40.0% | |
| ACAAAAGAGGGAAAGGAAGT+TGG | - | chr5.3:3586987-3587006 | None:intergenic | 40.0% | |
| ACATTACCAGTGGAGATCAT+GGG | - | chr5.3:3586018-3586037 | None:intergenic | 40.0% | |
| ACCAGAGATCGTTGTTGATA+AGG | + | chr5.3:3585956-3585975 | MS.gene072752:CDS | 40.0% | |
| ACCATTGGTGTGTCAGTTAA+GGG | - | chr5.3:3585512-3585531 | None:intergenic | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr5.3:3584112-3584131 | MS.gene072752:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | chr5.3:3584451-3584470 | MS.gene072752:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr5.3:3583801-3583820 | MS.gene072752:intron | 40.0% | |
| AGGAGAGTCAGGTTAAAAGA+GGG | + | chr5.3:3584604-3584623 | MS.gene072752:intron | 40.0% | |
| AGGTCAATTATGCACTGTGA+GGG | + | chr5.3:3586625-3586644 | MS.gene072752:intron | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr5.3:3583874-3583893 | MS.gene072752:intron | 40.0% | |
| ATCTCCAACTTTCACCTTCA+AGG | - | chr5.3:3584142-3584161 | None:intergenic | 40.0% | |
| CAAAAGAGGGAAAGGAAGTT+GGG | - | chr5.3:3586986-3587005 | None:intergenic | 40.0% | |
| CAATATCGAGAAGTTGCAGT+TGG | + | chr5.3:3582909-3582928 | MS.gene072752:CDS | 40.0% | |
| CACTGATGTGTCTAATGTCA+TGG | + | chr5.3:3585552-3585571 | MS.gene072752:intron | 40.0% | |
| CAGCGATATGTGATTAGTAC+TGG | - | chr5.3:3583573-3583592 | None:intergenic | 40.0% | |
| CATGACATTAGACACATCAG+TGG | - | chr5.3:3585554-3585573 | None:intergenic | 40.0% | |
| CCTTGTTGACCAGTAAAAAG+GGG | - | chr5.3:3585606-3585625 | None:intergenic | 40.0% | |
| CTAATCAAACCAAGGTTTGG+AGG | - | chr5.3:3587439-3587458 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr5.3:3583803-3583822 | MS.gene072752:intron | 40.0% | |
| CTATGCAGTTGAATGCTTCA+CGG | + | chr5.3:3584956-3584975 | MS.gene072752:CDS | 40.0% | |
| GAGAAAGGGTTGTGGTATTT+AGG | + | chr5.3:3585241-3585260 | MS.gene072752:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr5.3:3583802-3583821 | MS.gene072752:intron | 40.0% | |
| GCTTCTTGAAGCAATACCAT+TGG | - | chr5.3:3585527-3585546 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr5.3:3583745-3583764 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr5.3:3584198-3584217 | MS.gene072752:intron | 40.0% | |
| GGGTTGTGGTATTTAGGTAT+AGG | + | chr5.3:3585247-3585266 | MS.gene072752:intron | 40.0% | |
| GTTAAGGGGTTTGTAGTTAG+TGG | - | chr5.3:3585497-3585516 | None:intergenic | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr5.3:3583875-3583894 | MS.gene072752:intron | 40.0% | |
| TAAGAAAGGGCTGTGGTATA+GGG | - | chr5.3:3585419-3585438 | None:intergenic | 40.0% | |
| TACCATTGGTGTGTCAGTTA+AGG | - | chr5.3:3585513-3585532 | None:intergenic | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr5.3:3583804-3583823 | MS.gene072752:intron | 40.0% | |
| TCCTTATCAACAACGATCTC+TGG | - | chr5.3:3585960-3585979 | None:intergenic | 40.0% | |
| TCTACCTTGAAGGTGAAAGT+TGG | + | chr5.3:3584135-3584154 | MS.gene072752:intron | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr5.3:3583789-3583808 | MS.gene072752:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr5.3:3583874-3583893 | None:intergenic | 40.0% | |
| TTAAGAAAGGGCTGTGGTAT+AGG | - | chr5.3:3585420-3585439 | None:intergenic | 40.0% | |
| TTAGGAACTGTATAAAGGGG+CGG | + | chr5.3:3586671-3586690 | MS.gene072752:intron | 40.0% | |
| TTGGGCAGTAATGCTAAGTT+GGG | - | chr5.3:3586968-3586987 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr5.3:3583875-3583894 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr5.3:3584749-3584768 | None:intergenic | 40.0% |
| ! | AGATTGCAGGACTTTGAGAA+AGG | + | chr5.3:3585226-3585245 | MS.gene072752:intron | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr5.3:3584750-3584769 | None:intergenic | 40.0% |
| ! | CGATATGTGATTAGTACTGG+CGG | - | chr5.3:3583570-3583589 | None:intergenic | 40.0% |
| ! | CTTTTCGCTCATACTCTTGA+CGG | - | chr5.3:3582957-3582976 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr5.3:3583737-3583756 | MS.gene072752:intron | 40.0% |
| ! | GATTGCAGGACTTTGAGAAA+GGG | + | chr5.3:3585227-3585246 | MS.gene072752:intron | 40.0% |
| ! | GCCTTGTTGACCAGTAAAAA+GGG | - | chr5.3:3585607-3585626 | None:intergenic | 40.0% |
| ! | TCTGCAAAAAGCATGCATCT+CGG | - | chr5.3:3583970-3583989 | None:intergenic | 40.0% |
| ! | TGTGTTTGGGTTCACAATAG+AGG | + | chr5.3:3587333-3587352 | MS.gene072752:intron | 40.0% |
| ! | TTGTTATTCTTCAGCTCTGG+AGG | + | chr5.3:3586289-3586308 | MS.gene072752:intron | 40.0% |
| !! | ACTCGTTTTGGATGCTTTGT+CGG | + | chr5.3:3583322-3583341 | MS.gene072752:intron | 40.0% |
| !! | GATATGTGATTAGTACTGGC+GGG | - | chr5.3:3583569-3583588 | None:intergenic | 40.0% |
| !! | TGTCTAGCTCTGTTAGTCAA+GGG | + | chr5.3:3586124-3586143 | MS.gene072752:intron | 40.0% |
| AAACTTCCTCTACCAAGTGC+AGG | - | chr5.3:3585890-3585909 | None:intergenic | 45.0% | |
| AACTGTATAAAGGGGCGGAA+CGG | + | chr5.3:3586676-3586695 | MS.gene072752:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr5.3:3584478-3584497 | MS.gene072752:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr5.3:3584350-3584369 | MS.gene072752:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.3:3584593-3584612 | MS.gene072752:intron | 45.0% | |
| AGGTATAGGGCTATGAAGCA+CGG | + | chr5.3:3585261-3585280 | MS.gene072752:intron | 45.0% | |
| AGTCAGGTTAAAAGAGGGAG+AGG | + | chr5.3:3584609-3584628 | MS.gene072752:intron | 45.0% | |
| ATCCATTATGCCGGACTTCT+AGG | + | chr5.3:3586082-3586101 | MS.gene072752:intron | 45.0% | |
| ATGCATTGTGCAAGTGGTTC+GGG | + | chr5.3:3587174-3587193 | MS.gene072752:intron | 45.0% | |
| ATTATGCCGGACTTCTAGGT+AGG | + | chr5.3:3586086-3586105 | MS.gene072752:intron | 45.0% | |
| CAATTCCCTACCTAGAAGTC+CGG | - | chr5.3:3586095-3586114 | None:intergenic | 45.0% | |
| CACATTCAAGAGTTCCTTGG+CGG | - | chr5.3:3585034-3585053 | None:intergenic | 45.0% | |
| CATTACCAGTGGAGATCATG+GGG | - | chr5.3:3586017-3586036 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGACT+TGG | + | chr5.3:3584748-3584767 | MS.gene072752:intron | 45.0% | |
| CCATTGGTGTGTCAGTTAAG+GGG | - | chr5.3:3585511-3585530 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr5.3:3584398-3584417 | MS.gene072752:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr5.3:3584395-3584414 | None:intergenic | 45.0% | |
| CTTAGTGGGATAAGACTTGG+TGG | + | chr5.3:3584751-3584770 | MS.gene072752:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr5.3:3584283-3584302 | None:intergenic | 45.0% | |
| CTTCTGTCCTATTGAGGTGT+CGG | + | chr5.3:3585856-3585875 | MS.gene072752:CDS | 45.0% | |
| GAAAGCCCTGAAGAAGAAAG+GGG | + | chr5.3:3583759-3583778 | MS.gene072752:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr5.3:3584477-3584496 | MS.gene072752:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.3:3584603-3584622 | MS.gene072752:intron | 45.0% | |
| GAGGTCAATTATGCACTGTG+AGG | + | chr5.3:3586624-3586643 | MS.gene072752:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | + | chr5.3:3584440-3584459 | MS.gene072752:intron | 45.0% | |
| GATGCATTGTGCAAGTGGTT+CGG | + | chr5.3:3587173-3587192 | MS.gene072752:intron | 45.0% | |
| GCTAGAAGCAATCTGAGCAA+TGG | - | chr5.3:3586781-3586800 | None:intergenic | 45.0% | |
| GCTCACATTCAAGAGTTCCT+TGG | - | chr5.3:3585037-3585056 | None:intergenic | 45.0% | |
| GGAAAGCCCTGAAGAAGAAA+GGG | + | chr5.3:3583758-3583777 | MS.gene072752:intron | 45.0% | |
| GTAAAAAGGGGAAGAGAAGC+AGG | - | chr5.3:3585594-3585613 | None:intergenic | 45.0% | |
| GTACACCATCGTATTCAAGC+CGG | + | chr5.3:3584237-3584256 | MS.gene072752:intron | 45.0% | |
| GTCAAACCGGCAATGTTGTA+TGG | + | chr5.3:3584345-3584364 | MS.gene072752:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | chr5.3:3584445-3584464 | MS.gene072752:intron | 45.0% | |
| GTTGAATGCTTCACGGTTGA+AGG | + | chr5.3:3584963-3584982 | MS.gene072752:CDS | 45.0% | |
| GTTGGGCAGTAATGCTAAGT+TGG | - | chr5.3:3586969-3586988 | None:intergenic | 45.0% | |
| TAAACGGGAAGCTAGAGACT+TGG | + | chr5.3:3584025-3584044 | MS.gene072752:intron | 45.0% | |
| TACACCATCGTATTCAAGCC+GGG | + | chr5.3:3584238-3584257 | MS.gene072752:intron | 45.0% | |
| TACCTAGAAGTCCGGCATAA+TGG | - | chr5.3:3586087-3586106 | None:intergenic | 45.0% | |
| TAGAAGCAAGACGGAGTACA+TGG | + | chr5.3:3584083-3584102 | MS.gene072752:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr5.3:3584354-3584373 | None:intergenic | 45.0% | |
| TCTCTCGGGTCTAACTTGAT+TGG | + | chr5.3:3586159-3586178 | MS.gene072752:intron | 45.0% | |
| TCTTCAAGCCCAAGATGATG+TGG | + | chr5.3:3584987-3585006 | MS.gene072752:CDS | 45.0% | |
| TCTTCTCCATTTCAACCACC+CGG | - | chr5.3:3584259-3584278 | None:intergenic | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr5.3:3584476-3584495 | MS.gene072752:intron | 45.0% | |
| TGGAAAGCCCTGAAGAAGAA+AGG | + | chr5.3:3583757-3583776 | MS.gene072752:intron | 45.0% | |
| TGGGCAGTAATGCTAAGTTG+GGG | - | chr5.3:3586967-3586986 | None:intergenic | 45.0% | |
| TGGTATAGGGCTATGAAGCA+CGG | - | chr5.3:3585406-3585425 | None:intergenic | 45.0% | |
| TGTTGGATGCATTGTGCAAG+TGG | + | chr5.3:3587168-3587187 | MS.gene072752:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr5.3:3584358-3584377 | MS.gene072752:intron | 45.0% | |
| TTATGCCGGACTTCTAGGTA+GGG | + | chr5.3:3586087-3586106 | MS.gene072752:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr5.3:3584264-3584283 | MS.gene072752:intron | 45.0% | |
| ! | ACTAGTGTGATGATGCAGGA+TGG | + | chr5.3:3583832-3583851 | MS.gene072752:intron | 45.0% |
| ! | AGGACTTTGAGAAAGGGTTG+TGG | + | chr5.3:3585233-3585252 | MS.gene072752:intron | 45.0% |
| ! | AGTTGGGGGCGTATCTATTT+AGG | - | chr5.3:3586952-3586971 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr5.3:3584751-3584770 | None:intergenic | 45.0% |
| ! | CCCCTTTTTACTGGTCAACA+AGG | + | chr5.3:3585603-3585622 | MS.gene072752:intron | 45.0% |
| ! | CGGAACGGACTTAAGGATTA+AGG | + | chr5.3:3586691-3586710 | MS.gene072752:intron | 45.0% |
| ! | CTAGTGTGATGATGCAGGAT+GGG | + | chr5.3:3583833-3583852 | MS.gene072752:intron | 45.0% |
| ! | GCACTTGGTAGAGGAAGTTT+TGG | + | chr5.3:3585890-3585909 | MS.gene072752:CDS | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr5.3:3583985-3584004 | MS.gene072752:intron | 45.0% |
| ! | GCTTCTCTTCCCCTTTTTAC+TGG | + | chr5.3:3585594-3585613 | MS.gene072752:intron | 45.0% |
| ! | GTTAGGTTTCTTTGGGGGAA+GGG | - | chr5.3:3585700-3585719 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr5.3:3584359-3584378 | MS.gene072752:intron | 45.0% |
| ! | TAGTGTGATGATGCAGGATG+GGG | + | chr5.3:3583834-3583853 | MS.gene072752:intron | 45.0% |
| ! | TGCTCAGGAGTATGCTGAAA+AGG | + | chr5.3:3585920-3585939 | MS.gene072752:CDS | 45.0% |
| ! | TGTCGTTTAAGAAAGGGCTG+TGG | - | chr5.3:3585426-3585445 | None:intergenic | 45.0% |
| ! | TGTTAGGTTTCTTTGGGGGA+AGG | - | chr5.3:3585701-3585720 | None:intergenic | 45.0% |
| ! | TTAGGTTTCTTTGGGGGAAG+GGG | - | chr5.3:3585699-3585718 | None:intergenic | 45.0% |
| ! | TTCGACTAGTGTGATGATGC+AGG | + | chr5.3:3583828-3583847 | MS.gene072752:intron | 45.0% |
| !! | CGACAGATGACGCTCTAAAA+AGG | - | chr5.3:3587051-3587070 | None:intergenic | 45.0% |
| !! | GATCTCGTTGGCTTTCTCTT+CGG | - | chr5.3:3582725-3582744 | None:intergenic | 45.0% |
| !! | GGCCTTGTTGACCAGTAAAA+AGG | - | chr5.3:3585608-3585627 | None:intergenic | 45.0% |
| !! | GTGGTATTGGCTTCTCATGA+TGG | + | chr5.3:3586313-3586332 | MS.gene072752:CDS | 45.0% |
| !! | GTGTCTAGCTCTGTTAGTCA+AGG | + | chr5.3:3586123-3586142 | MS.gene072752:intron | 45.0% |
| !!! | AGTTTTGGATTCAGCTGCTC+AGG | + | chr5.3:3585905-3585924 | MS.gene072752:CDS | 45.0% |
| !!! | TTTTAGAGCGTCATCTGTCG+CGG | + | chr5.3:3587051-3587070 | MS.gene072752:intron | 45.0% |
| AAGCCCCCTCATACATATCC+TGG | - | chr5.3:3583810-3583829 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr5.3:3583894-3583913 | None:intergenic | 50.0% | |
| AATGAAAGAGTCTGCCGCCA+AGG | + | chr5.3:3585017-3585036 | MS.gene072752:CDS | 50.0% | |
| ACAATCCCCATGATCTCCAC+TGG | + | chr5.3:3586009-3586028 | MS.gene072752:CDS | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+AGG | - | chr5.3:3584080-3584099 | None:intergenic | 50.0% | |
| AGCAAATCCAGCAGATGGTG+CGG | + | chr5.3:3582683-3582702 | MS.gene072752:CDS | 50.0% | |
| AGCGGAAACAGAGATCTCGT+TGG | - | chr5.3:3582737-3582756 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr5.3:3584426-3584445 | MS.gene072752:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr5.3:3584010-3584029 | MS.gene072752:intron | 50.0% | |
| ATCATGGGGATTGTGATGGC+TGG | - | chr5.3:3586003-3586022 | None:intergenic | 50.0% | |
| ATGAAGCACGGGCAAAGACA+CGG | + | chr5.3:3585273-3585292 | MS.gene072752:intron | 50.0% | |
| ATGCACTGTGAGGGACAACT+TGG | + | chr5.3:3586634-3586653 | MS.gene072752:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr5.3:3584479-3584498 | MS.gene072752:intron | 50.0% | |
| CCCCTTAACTGACACACCAA+TGG | + | chr5.3:3585508-3585527 | MS.gene072752:intron | 50.0% | |
| CCTCACCCCTTTCTTCTTCA+GGG | - | chr5.3:3583767-3583786 | None:intergenic | 50.0% | |
| CCTCTTTCCGACACCTCAAT+AGG | - | chr5.3:3585866-3585885 | None:intergenic | 50.0% | |
| CGACACCTCAATAGGACAGA+AGG | - | chr5.3:3585858-3585877 | None:intergenic | 50.0% | |
| CGAGAAGTTGCAGTTGGTTG+AGG | + | chr5.3:3582915-3582934 | MS.gene072752:CDS | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr5.3:3583648-3583667 | MS.gene072752:intron | 50.0% | |
| CTATCGGACAGCAGTCAAAC+CGG | + | chr5.3:3584332-3584351 | MS.gene072752:intron | 50.0% | |
| CTCCAAGCAAATCCAGCAGA+TGG | + | chr5.3:3582678-3582697 | MS.gene072752:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.3:3584745-3584764 | None:intergenic | 50.0% | |
| CTTGTCCAAAGAGCTGCTTG+CGG | - | chr5.3:3587535-3587554 | None:intergenic | 50.0% | |
| CTTTCTCTTCGGCTTCTTGG+CGG | - | chr5.3:3582714-3582733 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTGA+AGG | + | chr5.3:3584125-3584144 | MS.gene072752:intron | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr5.3:3584009-3584028 | MS.gene072752:intron | 50.0% | |
| GCTCAGATTGCTTCTAGCAC+TGG | + | chr5.3:3586783-3586802 | MS.gene072752:intron | 50.0% | |
| GGAGATCATGGGGATTGTGA+TGG | - | chr5.3:3586007-3586026 | None:intergenic | 50.0% | |
| GGGAAGAGAAGCAGGATGAT+AGG | - | chr5.3:3585586-3585605 | None:intergenic | 50.0% | |
| GGTATAGGGCTATGAAGCAC+GGG | + | chr5.3:3585262-3585281 | MS.gene072752:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr5.3:3584484-3584503 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr5.3:3585395-3585414 | None:intergenic | 50.0% | |
| TCATGGGGATTGTGATGGCT+GGG | - | chr5.3:3586002-3586021 | None:intergenic | 50.0% | |
| TCCTCACCCCTTTCTTCTTC+AGG | - | chr5.3:3583768-3583787 | None:intergenic | 50.0% | |
| TGAAGTGCGGGTACTACTCA+AGG | - | chr5.3:3586843-3586862 | None:intergenic | 50.0% | |
| TGCACTGTGAGGGACAACTT+GGG | + | chr5.3:3586635-3586654 | MS.gene072752:intron | 50.0% | |
| TGGCTTTCTCTTCGGCTTCT+TGG | - | chr5.3:3582717-3582736 | None:intergenic | 50.0% | |
| TTCAAGCCGGGTGGTTGAAA+TGG | + | chr5.3:3584250-3584269 | MS.gene072752:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr5.3:3584406-3584425 | MS.gene072752:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr5.3:3584048-3584067 | MS.gene072752:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr5.3:3583996-3584015 | MS.gene072752:intron | 50.0% |
| ! | ATTGTGCAAGTGGTTCGGGT+GGG | + | chr5.3:3587178-3587197 | MS.gene072752:intron | 50.0% |
| ! | CACCATCTGCTGGATTTGCT+TGG | - | chr5.3:3582683-3582702 | None:intergenic | 50.0% |
| ! | GGGCAGTAATGCTAAGTTGG+GGG | - | chr5.3:3586966-3586985 | None:intergenic | 50.0% |
| ! | GGGGGCGTATCTATTTAGGA+AGG | - | chr5.3:3586948-3586967 | None:intergenic | 50.0% |
| ! | TAGGTTTCTTTGGGGGAAGG+GGG | - | chr5.3:3585698-3585717 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr5.3:3583995-3584014 | MS.gene072752:intron | 50.0% |
| !! | ATTCTTCAGCTCTGGAGGTG+TGG | + | chr5.3:3586294-3586313 | MS.gene072752:intron | 50.0% |
| !! | CCTATTGAGGTGTCGGAAAG+AGG | + | chr5.3:3585863-3585882 | MS.gene072752:CDS | 50.0% |
| !! | GGCTTGCATCTAGTTCTCTC+GGG | + | chr5.3:3586145-3586164 | MS.gene072752:intron | 50.0% |
| !! | GGGCTTGCATCTAGTTCTCT+CGG | + | chr5.3:3586144-3586163 | MS.gene072752:intron | 50.0% |
| !! | TGCATCTCGGTGCTAACTCT+TGG | - | chr5.3:3583957-3583976 | None:intergenic | 50.0% |
| ACCATCGTATTCAAGCCGGG+TGG | + | chr5.3:3584241-3584260 | MS.gene072752:intron | 55.0% | |
| ACGGGAAGCTAGAGACTTGG+AGG | + | chr5.3:3584028-3584047 | MS.gene072752:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.3:3584737-3584756 | None:intergenic | 55.0% | |
| AGAGGACCTGCACTTGGTAG+AGG | + | chr5.3:3585881-3585900 | MS.gene072752:CDS | 55.0% | |
| ATGGGGATTGTGATGGCTGG+GGG | - | chr5.3:3586000-3586019 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.3:3584736-3584755 | MS.gene072752:intron | 55.0% | |
| CAGATCCGCAAGCAGCTCTT+TGG | + | chr5.3:3587527-3587546 | MS.gene072752:intron | 55.0% | |
| CATGGGGATTGTGATGGCTG+GGG | - | chr5.3:3586001-3586020 | None:intergenic | 55.0% | |
| CCCTGAAGAAGAAAGGGGTG+AGG | + | chr5.3:3583764-3583783 | MS.gene072752:intron | 55.0% | |
| CCGCCTGAGTAGAAGCAAGA+CGG | + | chr5.3:3584074-3584093 | MS.gene072752:intron | 55.0% | |
| CCGTCTTGCTTCTACTCAGG+CGG | - | chr5.3:3584077-3584096 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr5.3:3584418-3584437 | MS.gene072752:intron | 55.0% | |
| GCGGAAGCCATACGCTTCTA+AGG | - | chr5.3:3584058-3584077 | None:intergenic | 55.0% | |
| GTTCGGGTGGGTGAGAGTTT+AGG | + | chr5.3:3587190-3587209 | MS.gene072752:intron | 55.0% | |
| TCGGAAAGAGGACCTGCACT+TGG | + | chr5.3:3585875-3585894 | MS.gene072752:CDS | 55.0% | |
| TGAAGCACGGGCAAAGACAC+GGG | + | chr5.3:3585274-3585293 | MS.gene072752:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.3:3584737-3584756 | MS.gene072752:intron | 55.0% | |
| ! | AAAGGGGCGGAACGGACTTA+AGG | + | chr5.3:3586684-3586703 | MS.gene072752:intron | 55.0% |
| ! | ACCACCCGGCTTGAATACGA+TGG | - | chr5.3:3584245-3584264 | None:intergenic | 55.0% |
| ! | AGGTTTCTTTGGGGGAAGGG+GGG | - | chr5.3:3585697-3585716 | None:intergenic | 55.0% |
| ! | CATTGTGCAAGTGGTTCGGG+TGG | + | chr5.3:3587177-3587196 | MS.gene072752:intron | 55.0% |
| ! | TCCTCGGATTAGGTGTGTCC+CGG | - | chr5.3:3585379-3585398 | None:intergenic | 55.0% |
| !! | CAGCTCTGGAGGTGTGGTAT+TGG | + | chr5.3:3586300-3586319 | MS.gene072752:intron | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr5.3:3584362-3584381 | MS.gene072752:intron | 55.0% |
| ACCGGGACACACCTAATCCG+AGG | + | chr5.3:3585375-3585394 | MS.gene072752:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr5.3:3585389-3585408 | None:intergenic | 60.0% | |
| GGATGAACCGCACCATCTGC+TGG | - | chr5.3:3582693-3582712 | None:intergenic | 60.0% | |
| ! | CGTGATGGAGCGATACCGGA+CGG | + | chr5.3:3583663-3583682 | MS.gene072752:intron | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr5.3:3583999-3584018 | MS.gene072752:intron | 60.0% |
| ! | GACGCGTGATGGAGCGATAC+CGG | + | chr5.3:3583659-3583678 | MS.gene072752:intron | 60.0% |
| ! | GGTTTCTTTGGGGGAAGGGG+GGG | - | chr5.3:3585696-3585715 | None:intergenic | 60.0% |
| ! | TAGAGCGTCATCTGTCGCGG+TGG | + | chr5.3:3587054-3587073 | MS.gene072752:intron | 60.0% |
| ACCGACGCGTGTCTGACACC+GGG | + | chr5.3:3585358-3585377 | MS.gene072752:intron | 65.0% | |
| CACCGACGCGTGTCTGACAC+CGG | + | chr5.3:3585357-3585376 | MS.gene072752:intron | 65.0% | |
| GGATTGTGATGGCTGGGGGC+AGG | - | chr5.3:3585996-3586015 | None:intergenic | 65.0% | |
| TTGTGATGGCTGGGGGCAGG+TGG | - | chr5.3:3585993-3586012 | None:intergenic | 65.0% | |
| ! | TCCCGGTGTCAGACACGCGT+CGG | - | chr5.3:3585362-3585381 | None:intergenic | 65.0% |
| ! | TTCTTTGGGGGAAGGGGGGG+TGG | - | chr5.3:3585693-3585712 | None:intergenic | 65.0% |
| !! | GAAGGGGGGGTGGACTGTGG+AGG | - | chr5.3:3585683-3585702 | None:intergenic | 70.0% |
| !! | GGGGAAGGGGGGGTGGACTG+TGG | - | chr5.3:3585686-3585705 | None:intergenic | 75.0% |
| !! | GGGGGGGTGGACTGTGGAGG+CGG | - | chr5.3:3585680-3585699 | None:intergenic | 75.0% |
| !! | GGGGGGTGGACTGTGGAGGC+GGG | - | chr5.3:3585679-3585698 | None:intergenic | 75.0% |
| !! | GGGGGTGGACTGTGGAGGCG+GGG | - | chr5.3:3585678-3585697 | None:intergenic | 75.0% |
| !! | GGGGTGGACTGTGGAGGCGG+GGG | - | chr5.3:3585677-3585696 | None:intergenic | 75.0% |
| !! | GGGTGGACTGTGGAGGCGGG+GGG | - | chr5.3:3585676-3585695 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3582661 | 3587565 | 3582661 | ID=MS.gene072752 |
| chr5.3 | mRNA | 3582661 | 3587565 | 3582661 | ID=MS.gene072752.t1;Parent=MS.gene072752 |
| chr5.3 | exon | 3582661 | 3582762 | 3582661 | ID=MS.gene072752.t1.exon1;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3582661 | 3582762 | 3582661 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| chr5.3 | exon | 3582904 | 3583004 | 3582904 | ID=MS.gene072752.t1.exon2;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3582904 | 3583004 | 3582904 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| chr5.3 | exon | 3584948 | 3585104 | 3584948 | ID=MS.gene072752.t1.exon3;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3584948 | 3585104 | 3584948 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| chr5.3 | exon | 3585834 | 3586030 | 3585834 | ID=MS.gene072752.t1.exon4;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3585834 | 3586030 | 3585834 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| chr5.3 | exon | 3586303 | 3586402 | 3586303 | ID=MS.gene072752.t1.exon5;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3586303 | 3586402 | 3586303 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| chr5.3 | exon | 3587530 | 3587565 | 3587530 | ID=MS.gene072752.t1.exon6;Parent=MS.gene072752.t1 |
| chr5.3 | CDS | 3587530 | 3587565 | 3587530 | ID=cds.MS.gene072752.t1;Parent=MS.gene072752.t1 |
| Gene Sequence |
| Protein sequence |
