AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47372

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47372.t1 MTR_1g061690 98.168 546 8 1 1 544 1 546 0.0 1120
MS.gene47372.t1 MTR_4g056390 67.170 530 166 2 12 533 7 536 0.0 759
MS.gene47372.t1 MTR_2g084555 68.362 531 149 5 11 530 7 529 0.0 748
MS.gene47372.t1 MTR_5g024270 53.509 456 154 4 23 477 17 415 6.50e-172 493
MS.gene47372.t1 MTR_8g073250 52.203 454 157 4 23 476 17 410 7.49e-169 486
MS.gene47372.t1 MTR_5g024270 52.480 383 124 4 23 404 17 342 1.43e-134 396
MS.gene47372.t1 MTR_3g076540 38.608 158 90 4 29 186 80 230 5.46e-27 114
MS.gene47372.t1 MTR_3g076540 30.899 178 88 6 317 476 259 419 2.84e-17 84.7
MS.gene47372.t1 MTR_3g076540 38.608 158 90 4 29 186 80 230 6.47e-27 113
MS.gene47372.t1 MTR_3g076540 29.570 186 88 7 317 476 259 427 9.17e-15 77.0
MS.gene47372.t1 MTR_3g109390 36.250 160 95 4 27 186 58 210 8.55e-27 111
MS.gene47372.t1 MTR_3g109390 40.206 97 52 1 317 413 238 328 6.68e-16 79.3
MS.gene47372.t1 MTR_3g109390 36.250 160 95 4 27 186 58 210 1.04e-26 112
MS.gene47372.t1 MTR_3g109390 32.955 176 91 3 317 478 238 400 3.69e-21 96.3
MS.gene47372.t1 MTR_3g109390 36.250 160 95 4 27 186 58 210 1.13e-26 112
MS.gene47372.t1 MTR_3g109390 33.523 176 88 4 317 478 238 398 1.49e-20 94.4
MS.gene47372.t1 MTR_3g109390 36.250 160 95 4 27 186 36 188 1.29e-26 112
MS.gene47372.t1 MTR_3g109390 32.955 176 91 3 317 478 216 378 2.55e-21 96.3
MS.gene47372.t1 MTR_4g104620 37.580 157 91 4 29 185 84 233 2.07e-26 112
MS.gene47372.t1 MTR_4g104620 30.857 175 86 6 317 473 263 420 8.84e-16 80.1
MS.gene47372.t1 MTR_3g076540 39.474 152 85 4 35 186 4 148 6.80e-26 109
MS.gene47372.t1 MTR_3g076540 30.899 178 88 6 317 476 177 337 1.71e-17 84.3
MS.gene47372.t1 MTR_3g086530 32.941 170 104 5 19 185 66 228 1.27e-24 104
MS.gene47372.t1 MTR_3g086530 32.941 170 104 5 19 185 66 228 2.65e-24 105
MS.gene47372.t1 MTR_3g086530 33.654 104 63 1 317 420 260 357 2.83e-13 72.0
MS.gene47372.t1 MTR_3g086530 32.941 170 104 5 19 185 66 228 5.69e-24 105
MS.gene47372.t1 MTR_3g086530 33.654 104 63 1 317 420 260 357 2.55e-13 72.4
MS.gene47372.t1 MTR_4g104620 38.571 140 80 3 46 185 6 139 1.47e-23 102
MS.gene47372.t1 MTR_4g104620 30.857 175 86 6 317 473 169 326 8.36e-16 79.3
MS.gene47372.t1 MTR_8g070930 40.136 147 82 3 41 186 136 277 5.73e-23 103
MS.gene47372.t1 MTR_8g070930 38.333 120 64 3 308 423 273 386 1.30e-15 80.9
MS.gene47372.t1 MTR_3g076540 38.686 137 78 3 50 186 1 131 1.60e-22 99.0
MS.gene47372.t1 MTR_3g076540 30.899 178 88 6 317 476 160 320 1.89e-17 84.0
MS.gene47372.t1 MTR_4g104620 38.235 136 78 3 50 185 1 130 3.99e-22 97.8
MS.gene47372.t1 MTR_4g104620 30.857 175 86 6 317 473 160 317 9.92e-16 79.0
MS.gene47372.t1 MTR_3g109390 37.313 134 78 3 53 186 70 197 1.33e-21 97.4
MS.gene47372.t1 MTR_3g109390 32.955 176 91 3 317 478 225 387 4.94e-21 95.5
MS.gene47372.t1 MTR_3g109390 37.313 134 78 3 53 186 92 219 1.75e-21 97.4
MS.gene47372.t1 MTR_3g109390 32.955 176 91 3 317 478 247 409 1.05e-20 95.1
MS.gene47372.t1 MTR_6g074905 29.213 178 110 5 306 476 996 1164 1.87e-18 89.7
MS.gene47372.t1 MTR_5g082700 29.944 177 110 5 306 476 537 705 7.91e-18 87.4
MS.gene47372.t1 MTR_5g082700 33.548 155 94 3 35 185 394 543 1.06e-14 77.8
MS.gene47372.t1 MTR_3g086530 36.207 116 68 3 70 185 2 111 1.78e-17 84.0
MS.gene47372.t1 MTR_3g086530 33.654 104 63 1 317 420 143 240 1.29e-13 72.4
MS.gene47372.t1 MTR_1g111180 32.500 160 97 5 29 183 662 815 4.49e-17 85.5
MS.gene47372.t1 MTR_1g111180 32.124 193 105 6 308 483 814 997 2.13e-15 80.1
MS.gene47372.t1 MTR_1g111180 32.500 160 97 5 29 183 661 814 4.52e-17 85.5
MS.gene47372.t1 MTR_1g111180 32.124 193 105 6 308 483 813 996 2.07e-15 80.1
MS.gene47372.t1 MTR_0349s0030 29.609 179 110 5 306 477 116 285 1.06e-16 81.3
MS.gene47372.t1 MTR_5g082700 33.548 155 94 3 35 185 394 543 7.24e-15 77.8
MS.gene47372.t1 MTR_5g082700 33.548 155 94 3 35 185 394 543 9.80e-15 77.8
MS.gene47372.t1 MTR_5g082700 31.200 125 78 3 306 428 537 655 3.81e-12 69.3
MS.gene47372.t1 MTR_3g086530 33.333 105 64 1 316 420 87 185 4.14e-14 72.8
MS.gene47372.t1 MTR_6g074870 30.973 113 70 2 306 416 227 333 3.41e-12 68.6
MS.gene47372.t1 MTR_4g117490 34.254 181 92 9 306 477 155 317 3.82e-12 69.3
MS.gene47372.t1 MTR_4g087620 32.292 192 107 9 289 476 168 340 9.54e-12 67.4
MS.gene47372.t1 MTR_6g074750 39.130 69 40 1 306 372 45 113 1.07e-11 62.4
MS.gene47372.t1 MTR_4g117490 34.254 181 92 9 306 477 155 317 3.98e-11 65.9
MS.gene47372.t1 MTR_8g028720 33.898 177 87 9 308 476 169 323 5.61e-11 64.7
MS.gene47372.t1 MTR_8g098845 28.870 239 132 9 289 521 165 371 7.52e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47372.t1 AT3G53030 72.180 532 125 6 10 535 8 522 0.0 784
MS.gene47372.t1 AT3G44850 69.202 526 146 5 9 524 10 529 0.0 751
MS.gene47372.t1 AT5G22840 69.157 522 148 4 10 528 11 522 0.0 750
MS.gene47372.t1 AT4G35500 53.304 454 158 4 25 478 19 418 5.74e-172 493
MS.gene47372.t1 AT2G17530 51.101 454 167 3 25 478 19 417 1.97e-163 472
MS.gene47372.t1 AT2G17530 51.101 454 167 3 25 478 19 417 1.97e-163 472
MS.gene47372.t1 AT4G35500 51.209 455 167 4 25 478 19 419 8.62e-163 470
MS.gene47372.t1 AT2G17530 49.868 379 135 3 25 403 19 342 2.24e-124 369
MS.gene47372.t1 AT4G24740 37.209 172 100 5 29 200 84 247 3.20e-28 115
MS.gene47372.t1 AT4G24740 37.209 172 100 5 29 200 84 247 5.04e-28 115
MS.gene47372.t1 AT4G24740 35.833 120 70 2 284 403 231 343 2.07e-14 75.1
MS.gene47372.t1 AT4G24740 37.209 172 100 5 29 200 46 209 7.50e-28 115
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 193 385 8.05e-18 85.9
MS.gene47372.t1 AT4G24740 37.209 172 100 5 29 200 84 247 1.10e-27 115
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 231 423 8.99e-18 86.3
MS.gene47372.t1 AT4G32660 35.625 160 96 3 27 186 55 207 2.22e-26 110
MS.gene47372.t1 AT4G32660 42.574 101 51 3 317 416 235 329 2.37e-15 78.2
MS.gene47372.t1 AT4G32660 35.625 160 96 3 27 186 47 199 3.19e-26 111
MS.gene47372.t1 AT4G32660 34.706 170 93 5 317 476 227 388 7.96e-18 86.3
MS.gene47372.t1 AT4G32660 35.625 160 96 3 27 186 55 207 3.44e-26 111
MS.gene47372.t1 AT4G32660 34.706 170 93 5 317 476 235 396 8.73e-18 85.9
MS.gene47372.t1 AT3G53570 36.471 170 98 5 20 186 89 251 8.19e-26 110
MS.gene47372.t1 AT3G53570 31.844 179 88 5 316 476 281 443 1.40e-17 85.9
MS.gene47372.t1 AT3G53570 36.471 170 98 5 20 186 89 251 8.19e-26 110
MS.gene47372.t1 AT3G53570 31.844 179 88 5 316 476 281 443 1.40e-17 85.9
MS.gene47372.t1 AT3G53570 36.471 170 98 5 20 186 89 251 8.19e-26 110
MS.gene47372.t1 AT3G53570 31.844 179 88 5 316 476 281 443 1.40e-17 85.9
MS.gene47372.t1 AT3G53570 36.471 170 98 5 20 186 75 237 8.89e-26 110
MS.gene47372.t1 AT3G53570 31.844 179 88 5 316 476 267 429 1.70e-17 85.5
MS.gene47372.t1 AT3G53570 36.471 170 98 5 20 186 75 237 8.89e-26 110
MS.gene47372.t1 AT3G53570 31.844 179 88 5 316 476 267 429 1.70e-17 85.5
MS.gene47372.t1 AT4G24740 37.748 151 87 4 50 200 1 144 1.31e-24 103
MS.gene47372.t1 AT4G24740 35.833 120 70 2 284 403 128 240 1.14e-14 74.3
MS.gene47372.t1 AT4G24740 37.748 151 87 4 50 200 1 144 3.16e-24 103
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 128 320 6.75e-18 85.5
MS.gene47372.t1 AT4G24740 37.748 151 87 4 50 200 1 144 3.16e-24 103
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 128 320 6.75e-18 85.5
MS.gene47372.t1 AT4G24740 37.748 151 87 4 50 200 1 144 3.16e-24 103
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 128 320 6.75e-18 85.5
MS.gene47372.t1 AT5G35980 38.415 164 91 4 33 191 107 265 4.29e-24 107
MS.gene47372.t1 AT5G35980 38.525 122 65 4 306 423 253 368 3.05e-15 79.7
MS.gene47372.t1 AT5G35980 38.415 164 91 4 33 191 72 230 4.91e-24 107
MS.gene47372.t1 AT5G35980 38.525 122 65 4 306 423 218 333 4.20e-15 79.3
MS.gene47372.t1 AT5G35980 38.415 164 91 4 33 191 107 265 8.27e-24 106
MS.gene47372.t1 AT5G35980 38.525 122 65 4 306 423 253 368 4.16e-15 79.0
MS.gene47372.t1 AT1G73460 30.726 179 108 5 306 477 992 1161 7.20e-21 97.4
MS.gene47372.t1 AT1G73460 32.886 149 91 3 41 185 855 998 3.24e-13 73.2
MS.gene47372.t1 AT1G73460 30.726 179 108 5 306 477 992 1161 7.20e-21 97.4
MS.gene47372.t1 AT1G73460 32.886 149 91 3 41 185 855 998 3.24e-13 73.2
MS.gene47372.t1 AT1G73450 30.726 179 108 5 306 477 975 1144 8.84e-21 97.4
MS.gene47372.t1 AT1G73450 32.886 149 91 3 41 185 838 981 3.74e-13 73.2
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 25 217 4.69e-19 86.7
MS.gene47372.t1 AT4G24740 29.858 211 112 7 284 476 25 217 4.69e-19 86.7
MS.gene47372.t1 AT2G40120 31.073 177 110 5 306 477 395 564 9.62e-19 90.1
MS.gene47372.t1 AT2G40120 33.548 155 94 3 35 185 252 401 1.40e-14 77.0
MS.gene47372.t1 AT4G32660 34.706 170 93 5 317 476 123 284 4.42e-18 85.1
MS.gene47372.t1 AT4G32660 36.364 99 57 2 88 186 3 95 7.11e-14 72.8
MS.gene47372.t1 AT3G17750 29.545 176 112 4 306 476 961 1129 6.80e-18 88.2
MS.gene47372.t1 AT3G17750 32.500 160 97 4 30 185 815 967 5.79e-14 75.5
MS.gene47372.t1 AT3G25840 31.250 160 99 5 29 183 603 756 3.29e-15 79.3
MS.gene47372.t1 AT3G25840 32.571 175 97 5 317 476 764 932 4.24e-14 75.9
MS.gene47372.t1 AT3G53640 33.146 178 93 7 317 476 470 639 3.93e-15 79.0
MS.gene47372.t1 AT3G53640 30.625 160 100 5 29 183 309 462 5.63e-13 72.0
MS.gene47372.t1 AT1G13350 30.625 160 100 5 29 183 428 581 6.82e-15 78.2
MS.gene47372.t1 AT1G13350 30.682 176 100 5 317 476 589 758 1.89e-14 77.0
MS.gene47372.t1 AT3G25840 31.250 160 99 5 29 183 341 494 7.89e-15 78.2
MS.gene47372.t1 AT3G25840 32.571 175 97 5 317 476 502 670 4.37e-14 75.5
MS.gene47372.t1 AT1G13350 30.625 160 100 5 29 183 455 608 9.46e-15 77.8
MS.gene47372.t1 AT1G13350 30.682 176 100 5 317 476 616 785 2.83e-14 76.3
MS.gene47372.t1 AT1G13350 30.625 160 100 5 29 183 501 654 1.62e-14 77.4
MS.gene47372.t1 AT1G13350 30.682 176 100 5 317 476 662 831 3.90e-14 75.9
MS.gene47372.t1 AT1G73670 30.526 190 106 9 306 486 220 392 3.14e-12 69.7
MS.gene47372.t1 AT3G59790 29.333 225 126 9 289 510 173 367 7.33e-12 67.8
MS.gene47372.t1 AT2G30980 31.148 183 101 8 315 494 211 371 4.78e-11 65.5

Find 137 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCATAAGCACTTTATTTA+AGG 0.062791 1.4:-50849615 None:intergenic
AGAGATATGCTTTCATATTT+TGG 0.133189 1.4:+50845692 MS.gene47372:CDS
CATCTTTGTCCTTGTTCTTC+TGG 0.137125 1.4:-50849832 None:intergenic
CGGGATTTCTTCAATAGATA+TGG 0.256557 1.4:+50849557 MS.gene47372:CDS
GCCCTTAAATAAAGTGCTTA+TGG 0.273324 1.4:+50849613 MS.gene47372:CDS
GAATGTAGGTCCCCGTCTTT+TGG 0.274592 1.4:+50849754 MS.gene47372:CDS
GCATTAATGATGGAACTTCT+TGG 0.282888 1.4:+50849413 MS.gene47372:CDS
TATACTTAATAAGAGTTAAT+AGG 0.290620 1.4:-50845635 None:intergenic
TCTCCACTGTTTGGCTCGCT+TGG 0.295410 1.4:+50844399 MS.gene47372:CDS
CCTTGGAATACTTTCTTTGA+TGG 0.309821 1.4:-50849926 None:intergenic
TTAGACCATTTCAAGCATTC+TGG 0.313545 1.4:+50845564 MS.gene47372:CDS
TCCATAAGCACTTTATTTAA+GGG 0.317347 1.4:-50849614 None:intergenic
ATTCTACATCTGCGGATCTT+TGG 0.322906 1.4:+50846288 MS.gene47372:CDS
TCACGGATTGCCTATCAATA+TGG 0.323581 1.4:+50845665 MS.gene47372:CDS
TTGACTTTGGTAATGCTTGC+TGG 0.327850 1.4:+50846192 MS.gene47372:CDS
ATAGTCTTGTCTTTACTGTT+AGG 0.332521 1.4:-50845843 None:intergenic
CGTTCAGAGCAAGCTTGGTT+GGG 0.339812 1.4:+50844370 MS.gene47372:CDS
GGGGTCATTTCTCCACTGTT+TGG 0.341167 1.4:+50844390 MS.gene47372:CDS
ATATCCGTCGGCTGCGATTC+TGG 0.344849 1.4:+50849591 MS.gene47372:CDS
CTCCACTGTTTGGCTCGCTT+GGG 0.347766 1.4:+50844400 MS.gene47372:CDS
AAGAGGAGCACCAGATTTCC+TGG 0.363522 1.4:-50845814 None:intergenic
GAGGCCATGGAGGCTGGAAT+TGG 0.365219 1.4:+50849860 MS.gene47372:CDS
ATCAACAATTGATCCGTCTA+AGG 0.368658 1.4:+50845788 MS.gene47372:CDS
ATACAAACATGCTGTCCATT+TGG 0.376683 1.4:-50845588 None:intergenic
ATAGTGGTGACAACTTTGAT+AGG 0.377741 1.4:+50846366 MS.gene47372:CDS
ATCTCTTTAACCATATTGAT+AGG 0.403343 1.4:-50845675 None:intergenic
GAGAGGGAGGCCATGGAGGC+TGG 0.404591 1.4:+50849854 MS.gene47372:CDS
TGATTAGAAGACGGCATTGA+TGG 0.409832 1.4:-50849779 None:intergenic
TCTAAGGATCCCAGGAAATC+TGG 0.413304 1.4:+50845804 MS.gene47372:CDS
GGAGGTGAAATCGCTGCTTT+CGG 0.420256 1.4:-50844264 None:intergenic
AAATGGACAGCATGTTTGTA+TGG 0.420622 1.4:+50845590 MS.gene47372:CDS
TTCAAGCATTCTGGTCCAAA+TGG 0.428400 1.4:+50845573 MS.gene47372:CDS
AGAGACACTAAAACATCAAA+TGG 0.428919 1.4:+50845885 MS.gene47372:CDS
CTAGTTCTGCTGGCACTAGT+AGG 0.430061 1.4:+50846063 MS.gene47372:CDS
ACATCCATGAGCTGCTTGCT+TGG 0.434213 1.4:-50845949 None:intergenic
TGAACTACTTGCGGCTGCCT+TGG 0.440976 1.4:-50849943 None:intergenic
TTGGACCAGAATGCTTGAAA+TGG 0.452574 1.4:-50845569 None:intergenic
CGGTGCCCAGAGGTTATCCT+TGG 0.454662 1.4:+50846257 MS.gene47372:CDS
GGCTACCACGCCGTTCGAAT+CGG 0.458904 1.4:+50844320 MS.gene47372:CDS
TCTCTTGCAGAACTTGCATT+CGG 0.467917 1.4:-50846032 None:intergenic
GCATTACACAGAGGCTGCCC+TGG 0.469898 1.4:+50845473 MS.gene47372:CDS
CCGGCTGTAGGTCGTTTCTC+AGG 0.474020 1.4:-50849707 None:intergenic
GAAGTAGCAGTTTCAGCACC+AGG 0.474460 1.4:-50849806 None:intergenic
CATATCTATTGAAGAAATCC+CGG 0.482137 1.4:-50849556 None:intergenic
CAAAGATGAGAGGGAGGCCA+TGG 0.484725 1.4:+50849847 MS.gene47372:CDS
CATTGATGGCTCCAAAAGAC+GGG 0.487038 1.4:-50849765 None:intergenic
TCGTTCAGAGCAAGCTTGGT+TGG 0.487627 1.4:+50844369 MS.gene47372:CDS
AGCTCATGGATGTGCGGAGA+AGG 0.490342 1.4:+50845959 MS.gene47372:CDS
GAAATCGCTGCTTTCGGTGG+TGG 0.490996 1.4:-50844258 None:intergenic
GCAAAATCGTTATCTCATCC+AGG 0.491981 1.4:-50845491 None:intergenic
AAGTGCAAGTTAGTTGACTT+TGG 0.494805 1.4:+50846179 MS.gene47372:CDS
TTTGATCCAAGGATAACCTC+TGG 0.500060 1.4:-50846263 None:intergenic
CGGATGTAGCAGGCATTGAC+CGG 0.500642 1.4:-50849726 None:intergenic
TGGAATGAAGTCAAAAGAGC+AGG 0.504504 1.4:+50846100 MS.gene47372:CDS
AAAGCCAAGCAAGCAGCTCA+TGG 0.505034 1.4:+50845945 MS.gene47372:CDS
GTTCAGAGCAAGCTTGGTTG+GGG 0.505953 1.4:+50844371 MS.gene47372:CDS
CAGTAAAGACAAGACTATGC+TGG 0.508183 1.4:+50845848 MS.gene47372:CDS
AAGAAGAACGAACAGAATGA+TGG 0.508503 1.4:-50844427 None:intergenic
TATAATTCTCAGATCGCACT+AGG 0.509453 1.4:+50849521 MS.gene47372:intron
GAACAAGCTTCTAGTTCTGC+TGG 0.516084 1.4:+50846053 MS.gene47372:CDS
CATTCATCCACGGATGTAGC+AGG 0.517627 1.4:-50849736 None:intergenic
TATGTCGTTCAGAGCAAGCT+TGG 0.518360 1.4:+50844365 MS.gene47372:CDS
GTTTCCAATTCCAGCCTCCA+TGG 0.523041 1.4:-50849864 None:intergenic
TTCTGTGCCTTCGTCTTCGG+AGG 0.523074 1.4:-50844282 None:intergenic
TTACTGTTAGGAAGAATAAG+AGG 0.526154 1.4:-50845831 None:intergenic
GACATAACGACCGGAGCTGA+AGG 0.539436 1.4:-50844348 None:intergenic
AAAGAGCAGGGCAACAGAAG+AGG 0.541507 1.4:+50846113 MS.gene47372:CDS
ATCGGCGATACCTTCAGCTC+CGG 0.545934 1.4:+50844338 MS.gene47372:CDS
GTCAATGCCTGCTACATCCG+TGG 0.547156 1.4:+50849729 MS.gene47372:CDS
GAACAAGGACAAAGATGAGA+GGG 0.551701 1.4:+50849838 MS.gene47372:CDS
GAGAAGGAGGCATCTGAAGA+TGG 0.552642 1.4:+50845975 MS.gene47372:CDS
CTACATCCGTGGATGAATGT+AGG 0.555309 1.4:+50849740 MS.gene47372:CDS
GCATTGATGGCTCCAAAAGA+CGG 0.555544 1.4:-50849766 None:intergenic
GGACCACTTAGCATTAATGA+TGG 0.555688 1.4:+50849403 MS.gene47372:intron
GATTTCCTGGGATCCTTAGA+CGG 0.556902 1.4:-50845801 None:intergenic
GATCAATTGTTGATAAGAGA+AGG 0.558128 1.4:-50845779 None:intergenic
TCAAAGTTGTCACCACTATG+AGG 0.558782 1.4:-50846362 None:intergenic
GTTCCATCATTAATGCTAAG+TGG 0.559588 1.4:-50849406 None:intergenic
ATATCTATTGAAGAAATCCC+GGG 0.566218 1.4:-50849555 None:intergenic
TTGATCCGTCTAAGGATCCC+AGG 0.566867 1.4:+50845796 MS.gene47372:CDS
GTATTATTTGATCCTCATAG+TGG 0.567179 1.4:+50846350 MS.gene47372:CDS
ATTAAGTATAGTGATTATCA+CGG 0.569731 1.4:+50845648 MS.gene47372:CDS
AAGAAATTTATTACCTTCCG+CGG 0.571931 1.4:-50849443 None:intergenic
CACTAGTAGGTTATCAGATG+CGG 0.576983 1.4:+50846076 MS.gene47372:CDS
CAAGGACAAAGATGAGAGGG+AGG 0.580802 1.4:+50849841 MS.gene47372:CDS
TGGGTCAAACAAATGGGTGG+CGG 0.584188 1.4:+50844224 None:intergenic
TCTTGGAATGATGCCGCGGA+AGG 0.584206 1.4:+50849430 MS.gene47372:CDS
CTATCAAGATGAACTACTTG+CGG 0.587404 1.4:-50849952 None:intergenic
TTGATCCAAGGATAACCTCT+GGG 0.587839 1.4:-50846262 None:intergenic
AGAAGAACGAACAGAATGAT+GGG 0.588817 1.4:-50844426 None:intergenic
GAAGGTATCGCCGATTCGAA+CGG 0.589832 1.4:-50844330 None:intergenic
GGTGAAATCGCTGCTTTCGG+TGG 0.592150 1.4:-50844261 None:intergenic
TCATGGATGTGCGGAGAAGG+AGG 0.595831 1.4:+50845962 MS.gene47372:CDS
CCTGAGAAACGACCTACAGC+CGG 0.605154 1.4:+50849707 MS.gene47372:CDS
GATGGTAATCATGAAACCTC+TGG 0.606715 1.4:+50845993 MS.gene47372:CDS
ATAATTCTCAGATCGCACTA+GGG 0.611148 1.4:+50849522 MS.gene47372:intron
AGAGGAGCACCAGATTTCCT+GGG 0.614355 1.4:-50845813 None:intergenic
AGATGATTCTACAGCACCAG+AGG 0.614399 1.4:-50846009 None:intergenic
TAGTGGTGACAACTTTGATA+GGG 0.616977 1.4:+50846367 MS.gene47372:CDS
AAGTAGCAGTTTCAGCACCA+GGG 0.617453 1.4:-50849805 None:intergenic
ATCCCAAGCGAGCCAAACAG+TGG 0.619472 1.4:-50844402 None:intergenic
TTTGATGGAGAATGCATGAG+TGG 0.621786 1.4:-50849911 None:intergenic
CAAAATCGTTATCTCATCCA+GGG 0.625815 1.4:-50845490 None:intergenic
CCGTCTTCTAATCACAACCC+TGG 0.626806 1.4:+50849788 MS.gene47372:CDS
CCATCAAAGAAAGTATTCCA+AGG 0.627091 1.4:+50849926 MS.gene47372:CDS
ATATTCAGACAAGACAGTAT+CGG 0.630386 1.4:+50846237 MS.gene47372:CDS
TACTTCTGACCAGAAGAACA+AGG 0.631653 1.4:+50849823 MS.gene47372:CDS
AGGGCCAGAATCGCAGCCGA+CGG 0.635004 1.4:-50849595 None:intergenic
AGAACAAGGACAAAGATGAG+AGG 0.640119 1.4:+50849837 MS.gene47372:CDS
GCTCTGAACGACATAACGAC+CGG 0.640589 1.4:-50844357 None:intergenic
ATCAAAATATTCTACATCTG+CGG 0.641197 1.4:+50846280 MS.gene47372:CDS
AGATGAGAGGGAGGCCATGG+AGG 0.643015 1.4:+50849850 MS.gene47372:CDS
AACTTCTTGGAATGATGCCG+CGG 0.644175 1.4:+50849426 MS.gene47372:CDS
CCAGGGTTGTGATTAGAAGA+CGG 0.645495 1.4:-50849788 None:intergenic
AGTAGGTTATCAGATGCGGA+TGG 0.646147 1.4:+50846080 MS.gene47372:CDS
CGGGGACCTACATTCATCCA+CGG 0.647503 1.4:-50849746 None:intergenic
GTGATTTGAGACATATCCGT+CGG 0.649441 1.4:+50849579 MS.gene47372:CDS
GTTTCTCAGGAACAAAGTCA+AGG 0.651456 1.4:-50849694 None:intergenic
TAATTCTCAGATCGCACTAG+GGG 0.655674 1.4:+50849523 MS.gene47372:intron
GGAATGAAGTCAAAAGAGCA+GGG 0.655804 1.4:+50846101 MS.gene47372:CDS
GCAAGCAGCTCATGGATGTG+CGG 0.656226 1.4:+50845953 MS.gene47372:CDS
ACAGAAAATTACCGTCGCGG+TGG 0.665098 1.4:+50844299 MS.gene47372:CDS
GAGTTAATAGGTTATCCCCA+AGG 0.667992 1.4:-50845623 None:intergenic
GCAGTTTCTGTCTCACTGTG+CGG 0.668245 1.4:-50846139 None:intergenic
ATTCTCAGATCGCACTAGGG+GGG 0.670913 1.4:+50849525 MS.gene47372:intron
AGCAGGCATTGACCGGCTGT+AGG 0.674560 1.4:-50849719 None:intergenic
AATTCTCAGATCGCACTAGG+GGG 0.677507 1.4:+50849524 MS.gene47372:intron
GATTTCACCTCCGAAGACGA+AGG 0.680908 1.4:+50844275 MS.gene47372:CDS
CGGCGTGGTAGCCACCGCGA+CGG 0.681696 1.4:-50844310 None:intergenic
TGGAGATTTGCAGAGATACG+TGG 0.683349 1.4:+50845425 MS.gene47372:intron
CTTGCACTTGACATCAGCTG+AGG 0.686469 1.4:-50846165 None:intergenic
TGACAACTTTGATAGGGACG+AGG 0.691000 1.4:+50846373 MS.gene47372:CDS
GGCACAGAAAATTACCGTCG+CGG 0.698019 1.4:+50844296 MS.gene47372:CDS
GAGTGCTCAGCATTACACAG+AGG 0.702864 1.4:+50845464 MS.gene47372:CDS
TATCGCCGATTCGAACGGCG+TGG 0.712115 1.4:-50844325 None:intergenic
ATTGATGGCTCCAAAAGACG+GGG 0.727950 1.4:-50849764 None:intergenic
AAGACAGTATCGGTGCCCAG+AGG 0.753096 1.4:+50846247 MS.gene47372:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATTTATGTGTTAAT+AGG + chr1.4:50846467-50846486 MS.gene47372:intron 10.0%
!!! AATTTTAACTATTTATGAAT+TGG + chr1.4:50846768-50846787 MS.gene47372:intron 10.0%
!!! AGTTTTTTTTTTAATGTTTT+TGG + chr1.4:50844521-50844540 MS.gene47372:intron 10.0%
!!! ATAGTTAAAATTATAGTTTT+CGG - chr1.4:50846760-50846779 None:intergenic 10.0%
!!! ATTTTAACTATTTATGAATT+GGG + chr1.4:50846769-50846788 MS.gene47372:intron 10.0%
!! AAATATAAATTCTGTCAAAA+AGG + chr1.4:50847317-50847336 MS.gene47372:intron 15.0%
!! ACATTTAGTTACAAATATTA+TGG + chr1.4:50848927-50848946 MS.gene47372:intron 15.0%
!! TATACTTAATAAGAGTTAAT+AGG - chr1.4:50845638-50845657 None:intergenic 15.0%
!!! AAAAGATGATTTTTATACTA+CGG + chr1.4:50848901-50848920 MS.gene47372:intron 15.0%
!!! AAAATAATGCTTTGAATTTT+AGG + chr1.4:50844929-50844948 MS.gene47372:intron 15.0%
!!! AAATAATGCTTTGAATTTTA+GGG + chr1.4:50844930-50844949 MS.gene47372:intron 15.0%
!!! AAATGATACTTTGAATTTTA+GGG + chr1.4:50844567-50844586 MS.gene47372:intron 15.0%
!!! AAGATTTTCCTATATAATTA+GGG + chr1.4:50847805-50847824 MS.gene47372:intron 15.0%
!!! GAACTTAAAATGATTTTAAA+AGG - chr1.4:50848880-50848899 None:intergenic 15.0%
!!! TAAATGATACTTTGAATTTT+AGG + chr1.4:50844566-50844585 MS.gene47372:intron 15.0%
!!! TAAGATTTTCCTATATAATT+AGG + chr1.4:50847804-50847823 MS.gene47372:intron 15.0%
!!! TTTTGAAATATGAAATAGAA+GGG - chr1.4:50848578-50848597 None:intergenic 15.0%
!! AAAACAACTTATAGCTTATA+TGG + chr1.4:50845119-50845138 MS.gene47372:intron 20.0%
!! AAAACCTTCAAAAATTTAGA+CGG - chr1.4:50846576-50846595 None:intergenic 20.0%
!! AAACAACTTATAGCTTATAT+GGG + chr1.4:50845120-50845139 MS.gene47372:intron 20.0%
!! ATTAAGTATAGTGATTATCA+CGG + chr1.4:50845648-50845667 MS.gene47372:CDS 20.0%
!! GTAAAATTTGAACTTACTAA+TGG + chr1.4:50849076-50849095 MS.gene47372:intron 20.0%
!! TGATCATAAATGAAAAGAAA+TGG - chr1.4:50849473-50849492 None:intergenic 20.0%
!!! AAAAAATGAGTTTTAGAAGA+GGG + chr1.4:50847128-50847147 MS.gene47372:intron 20.0%
!!! AAATTATAGTTTTCGGTTAA+CGG - chr1.4:50846753-50846772 None:intergenic 20.0%
!!! AATAGAATACCTTGAATTTT+AGG + chr1.4:50844857-50844876 MS.gene47372:intron 20.0%
!!! ATAGAATACCTTGAATTTTA+GGG + chr1.4:50844858-50844877 MS.gene47372:intron 20.0%
!!! ATTATCTTCCTTTAGTTTAA+CGG + chr1.4:50848749-50848768 MS.gene47372:intron 20.0%
!!! ATTTTTTTTAGCTTATGCAA+AGG - chr1.4:50844797-50844816 None:intergenic 20.0%
!!! CAGTTTTTATCTTTTGTTTT+TGG + chr1.4:50845251-50845270 MS.gene47372:intron 20.0%
!!! CTAAAATCATTCTTTTACAA+AGG + chr1.4:50847348-50847367 MS.gene47372:intron 20.0%
!!! GAGCAATTTAATTTATATCT+AGG + chr1.4:50844903-50844922 MS.gene47372:intron 20.0%
!!! GTAAAAAGAGAAGATTTTTA+GGG - chr1.4:50844454-50844473 None:intergenic 20.0%
!!! GTTTTGAAATATGAAATAGA+AGG - chr1.4:50848579-50848598 None:intergenic 20.0%
!!! TAAAAAATGAGTTTTAGAAG+AGG + chr1.4:50847127-50847146 MS.gene47372:intron 20.0%
!!! TAAAAAGAGAAGATTTTTAG+GGG - chr1.4:50844453-50844472 None:intergenic 20.0%
!!! TGTAAAAAGAGAAGATTTTT+AGG - chr1.4:50844455-50844474 None:intergenic 20.0%
!!! TTATTTTTTTGTTGAGGAAA+TGG + chr1.4:50849153-50849172 MS.gene47372:intron 20.0%
!!! TTGATTTGCATGATATATTT+TGG - chr1.4:50849119-50849138 None:intergenic 20.0%
! AAAAAAAAACTGTCCAAACA+AGG + chr1.4:50849003-50849022 MS.gene47372:intron 25.0%
! AAAAAATCTCAAGAGACAAT+AGG + chr1.4:50847155-50847174 MS.gene47372:intron 25.0%
! AAAATCCATTTAGAAGAGAA+TGG - chr1.4:50848648-50848667 None:intergenic 25.0%
! AAACCTTCAAAAATTTAGAC+GGG - chr1.4:50846575-50846594 None:intergenic 25.0%
! AATTGTGAATTGTGAAATTC+TGG - chr1.4:50848378-50848397 None:intergenic 25.0%
! ACATAACAAAAGAATCAACA+TGG - chr1.4:50849271-50849290 None:intergenic 25.0%
! ATAAACAAGAAAACGTGAAA+AGG - chr1.4:50846923-50846942 None:intergenic 25.0%
! ATCAAAATATTCTACATCTG+CGG + chr1.4:50846280-50846299 MS.gene47372:CDS 25.0%
! ATCTCTTTAACCATATTGAT+AGG - chr1.4:50845678-50845697 None:intergenic 25.0%
! ATTCCTTATAGTAAAAAGCA+TGG + chr1.4:50848178-50848197 MS.gene47372:intron 25.0%
! ATTGACTAAATATCATGGAA+TGG + chr1.4:50846793-50846812 MS.gene47372:intron 25.0%
! ATTTCCATGTACTGAAATTA+AGG + chr1.4:50847948-50847967 MS.gene47372:intron 25.0%
! CATAAATGAAAAGAAATGGA+TGG - chr1.4:50849469-50849488 None:intergenic 25.0%
! CTAAAGGAAGATAATAAAGT+TGG - chr1.4:50848744-50848763 None:intergenic 25.0%
! CTGAAAAAAAACACTAGTAT+GGG + chr1.4:50847871-50847890 MS.gene47372:intron 25.0%
! GTCATCTAATAGATAAATTC+AGG - chr1.4:50847574-50847593 None:intergenic 25.0%
! TAGCAATAATGATGTCAATA+GGG + chr1.4:50847409-50847428 MS.gene47372:intron 25.0%
! TATTATTCATAAGCTTGTCA+AGG - chr1.4:50844746-50844765 None:intergenic 25.0%
! TCTAATAGATAAATTCAGGT+AGG - chr1.4:50847570-50847589 None:intergenic 25.0%
! TCTATTAGATGACCTTATTA+TGG + chr1.4:50847581-50847600 MS.gene47372:intron 25.0%
! TCTGAAAAAAAACACTAGTA+TGG + chr1.4:50847870-50847889 MS.gene47372:intron 25.0%
! TTGTCTCATTAACCATAATA+AGG - chr1.4:50847596-50847615 None:intergenic 25.0%
!! AGAGATATGCTTTCATATTT+TGG + chr1.4:50845692-50845711 MS.gene47372:CDS 25.0%
!! AGATGAATGATGCAAATTTT+AGG + chr1.4:50848001-50848020 MS.gene47372:intron 25.0%
!! ATATTAGAGCTTTGTATTAC+AGG - chr1.4:50846661-50846680 None:intergenic 25.0%
!! CTCTATCTTTAATTTATCTC+AGG + chr1.4:50849382-50849401 MS.gene47372:intron 25.0%
!! GGAAAAATCTTTATTTCTCA+AGG + chr1.4:50847646-50847665 MS.gene47372:intron 25.0%
!! TCCATAAGCACTTTATTTAA+GGG - chr1.4:50849617-50849636 None:intergenic 25.0%
!! TCTAAAACAGAGATAGAAAA+GGG + chr1.4:50847191-50847210 MS.gene47372:intron 25.0%
!! TGATAAGAGAAGGATATTTT+CGG - chr1.4:50845772-50845791 None:intergenic 25.0%
!! TGTATAATGGGATGTAATTA+AGG + chr1.4:50847720-50847739 MS.gene47372:intron 25.0%
!! TTATCTTCCTTTAGTTTAAC+GGG + chr1.4:50848750-50848769 MS.gene47372:intron 25.0%
!! TTTTTACTATAAGGAATGTG+TGG - chr1.4:50848175-50848194 None:intergenic 25.0%
!!! AAAAATGAGTTTTAGAAGAG+GGG + chr1.4:50847129-50847148 MS.gene47372:intron 25.0%
!!! ACGTTTTCTTGTTTATATGA+GGG + chr1.4:50846927-50846946 MS.gene47372:intron 25.0%
!!! ATACTTTGAATTTTAGGGAT+TGG + chr1.4:50844572-50844591 MS.gene47372:intron 25.0%
!!! ATATGCTTTCATATTTTGGT+TGG + chr1.4:50845696-50845715 MS.gene47372:CDS 25.0%
!!! ATGTAGAATATTTTGATCCA+AGG - chr1.4:50846277-50846296 None:intergenic 25.0%
!!! TAACCATGCTTTTTACTATA+AGG - chr1.4:50848184-50848203 None:intergenic 25.0%
!!! TACTTTGAATTTTAGGGATT+GGG + chr1.4:50844573-50844592 MS.gene47372:intron 25.0%
!!! TCTCTTCTAAATGGATTTTA+TGG + chr1.4:50848649-50848668 MS.gene47372:intron 25.0%
!!! TGTTTTTTAATGCTACTTAC+TGG + chr1.4:50849190-50849209 MS.gene47372:intron 25.0%
!!! TTCTAAAACAGAGATAGAAA+AGG + chr1.4:50847190-50847209 MS.gene47372:intron 25.0%
!!! TTTGACTTTTCTTTGATGTT+TGG - chr1.4:50847300-50847319 None:intergenic 25.0%
!!! TTTTTGGTTGAACAATTTGA+GGG + chr1.4:50844537-50844556 MS.gene47372:intron 25.0%
AAAAAATGCTATTCCAGCAT+AGG - chr1.4:50846723-50846742 None:intergenic 30.0%
AAAAATGCTATTCCAGCATA+GGG - chr1.4:50846722-50846741 None:intergenic 30.0%
AAAGGCCAACATTATGAATA+AGG - chr1.4:50846905-50846924 None:intergenic 30.0%
AAATATTATGGTCCATGAGA+TGG + chr1.4:50848939-50848958 MS.gene47372:intron 30.0%
AACCTTCAAAAATTTAGACG+GGG - chr1.4:50846574-50846593 None:intergenic 30.0%
AAGAAATTTATTACCTTCCG+CGG - chr1.4:50849446-50849465 None:intergenic 30.0%
AATTTCAGTACATGGAAATG+TGG - chr1.4:50847947-50847966 None:intergenic 30.0%
ACCTAAAAAGCTCTATTATG+AGG + chr1.4:50847679-50847698 MS.gene47372:intron 30.0%
AGAGACACTAAAACATCAAA+TGG + chr1.4:50845885-50845904 MS.gene47372:CDS 30.0%
AGTCAATTTGGGAAATGATT+TGG + chr1.4:50848461-50848480 MS.gene47372:intron 30.0%
AGTCTTCAAGACATTGTAAA+AGG - chr1.4:50847534-50847553 None:intergenic 30.0%
ATAAAAACTGTCCCAATGTT+TGG - chr1.4:50845241-50845260 None:intergenic 30.0%
ATATCTATTGAAGAAATCCC+GGG - chr1.4:50849558-50849577 None:intergenic 30.0%
ATATTCAGACAAGACAGTAT+CGG + chr1.4:50846237-50846256 MS.gene47372:CDS 30.0%
CAACATTATGAATAAGGCAT+GGG - chr1.4:50846899-50846918 None:intergenic 30.0%
CACTGATGATAAAAAATGTG+TGG + chr1.4:50845533-50845552 MS.gene47372:CDS 30.0%
CATATCTATTGAAGAAATCC+CGG - chr1.4:50849559-50849578 None:intergenic 30.0%
CATCAGTTTATGTTATAAGC+TGG + chr1.4:50845200-50845219 MS.gene47372:intron 30.0%
CATGTCAAACCAAAACAATA+TGG - chr1.4:50845277-50845296 None:intergenic 30.0%
CCAATTGCAAACTATAAAGT+TGG - chr1.4:50848969-50848988 None:intergenic 30.0%
CCTGTAATTCTAGTCAATTT+GGG + chr1.4:50848450-50848469 MS.gene47372:intron 30.0%
CTAGCAATAATGATGTCAAT+AGG + chr1.4:50847408-50847427 MS.gene47372:intron 30.0%
CTTAGTTATGGGTGTATAAT+GGG + chr1.4:50847708-50847727 MS.gene47372:intron 30.0%
CTTCCTAGATAATAAACCAA+TGG - chr1.4:50844837-50844856 None:intergenic 30.0%
CTTTATCTAATACTCAGTTC+AGG - chr1.4:50849057-50849076 None:intergenic 30.0%
GCAAGTTATTATGTTGAAAC+TGG - chr1.4:50849233-50849252 None:intergenic 30.0%
GCTGGAATTGATTAATTGTA+TGG + chr1.4:50846492-50846511 MS.gene47372:intron 30.0%
GTATTATTTGATCCTCATAG+TGG + chr1.4:50846350-50846369 MS.gene47372:CDS 30.0%
GTCAATTTGGGAAATGATTT+GGG + chr1.4:50848462-50848481 MS.gene47372:intron 30.0%
TAAACATGAATAATGAGTGC+TGG + chr1.4:50847048-50847067 MS.gene47372:intron 30.0%
TAACTGTTCATCCAAACATT+GGG + chr1.4:50845227-50845246 MS.gene47372:intron 30.0%
TAATAAACCAATGGCTCATT+TGG - chr1.4:50844828-50844847 None:intergenic 30.0%
TACTGAAATTAAGGTTGAGT+GGG + chr1.4:50847957-50847976 MS.gene47372:intron 30.0%
TCAACCTTAATTTCAGTACA+TGG - chr1.4:50847955-50847974 None:intergenic 30.0%
TCATGCAAATCAATTACTTC+AGG + chr1.4:50849126-50849145 MS.gene47372:intron 30.0%
TCCTGTAATTCTAGTCAATT+TGG + chr1.4:50848449-50848468 MS.gene47372:intron 30.0%
TGCAATCACCCTAATTATAT+AGG - chr1.4:50847816-50847835 None:intergenic 30.0%
TGGGAATTGACTAAATATCA+TGG + chr1.4:50846788-50846807 MS.gene47372:intron 30.0%
TTAACTGTTCATCCAAACAT+TGG + chr1.4:50845226-50845245 MS.gene47372:intron 30.0%
TTAAGCAACCATTTAGACTA+CGG + chr1.4:50844954-50844973 MS.gene47372:intron 30.0%
TTACTGTTAGGAAGAATAAG+AGG - chr1.4:50845834-50845853 None:intergenic 30.0%
TTCTACTTTCTATCAAGACT+GGG - chr1.4:50847253-50847272 None:intergenic 30.0%
TTGTTGTACTTCTAACATCT+TGG + chr1.4:50848832-50848851 MS.gene47372:intron 30.0%
TTTATGTGTTAATAGGTTGC+TGG + chr1.4:50846474-50846493 MS.gene47372:intron 30.0%
TTTCATAAGCTATCTTAGAG+AGG - chr1.4:50845102-50845121 None:intergenic 30.0%
TTTCTACTTTCTATCAAGAC+TGG - chr1.4:50847254-50847273 None:intergenic 30.0%
TTTCTGATAAGATCACAGTT+TGG + chr1.4:50848102-50848121 MS.gene47372:intron 30.0%
! ACCTCATAATAGAGCTTTTT+AGG - chr1.4:50847683-50847702 None:intergenic 30.0%
! ATAATGGGATGTAATTAAGG+TGG + chr1.4:50847723-50847742 MS.gene47372:intron 30.0%
! ATATTTTCGCTATGTAGAGT+AGG - chr1.4:50846452-50846471 None:intergenic 30.0%
! CCAACTTTATAGTTTGCAAT+TGG + chr1.4:50848966-50848985 MS.gene47372:intron 30.0%
! CTCCATAAGCACTTTATTTA+AGG - chr1.4:50849618-50849637 None:intergenic 30.0%
! GATAAGAGAAGGATATTTTC+GGG - chr1.4:50845771-50845790 None:intergenic 30.0%
! GATCAATTGTTGATAAGAGA+AGG - chr1.4:50845782-50845801 None:intergenic 30.0%
! GTAATGATAAGAAGCACATA+AGG + chr1.4:50847749-50847768 MS.gene47372:intron 30.0%
! TTTTATAAAGCCCAGACTTT+AGG + chr1.4:50848030-50848049 MS.gene47372:intron 30.0%
! TTTTTCCATGTTTCCAACTA+TGG - chr1.4:50847633-50847652 None:intergenic 30.0%
! TTTTTGTTGAGGAAATGGTT+TGG + chr1.4:50849158-50849177 MS.gene47372:intron 30.0%
!! AACATAATAACTTGCTTTGC+TGG + chr1.4:50849238-50849257 MS.gene47372:intron 30.0%
!! ATAGTCTTGTCTTTACTGTT+AGG - chr1.4:50845846-50845865 None:intergenic 30.0%
!! CACGTTTTCTTGTTTATATG+AGG + chr1.4:50846926-50846945 MS.gene47372:intron 30.0%
!! CAGTTTTTATTTGTCGTTGT+TGG + chr1.4:50845340-50845359 MS.gene47372:intron 30.0%
!! CGTTTTCTTGTTTATATGAG+GGG + chr1.4:50846928-50846947 MS.gene47372:intron 30.0%
!!! CTTTCATATTTTGGTTGGAT+TGG + chr1.4:50845701-50845720 MS.gene47372:CDS 30.0%
!!! GGCTGATTATTTTTTTGTTG+AGG + chr1.4:50849147-50849166 MS.gene47372:intron 30.0%
!!! GTCTTTGCTTTTTTGTGTTT+TGG + chr1.4:50845316-50845335 MS.gene47372:intron 30.0%
!!! GTTTTTGGTTGAACAATTTG+AGG + chr1.4:50844536-50844555 MS.gene47372:intron 30.0%
!!! TCTATCTCTGTTTTAGAAGA+CGG - chr1.4:50847188-50847207 None:intergenic 30.0%
!!! TGTTTTTGGCCATATTGTTT+TGG + chr1.4:50845265-50845284 MS.gene47372:intron 30.0%
!!! TTTGGACAGTTTTTTTTTCC+AGG - chr1.4:50849001-50849020 None:intergenic 30.0%
AAAATGCTATTCCAGCATAG+GGG - chr1.4:50846721-50846740 None:intergenic 35.0%
AAATGGACAGCATGTTTGTA+TGG + chr1.4:50845590-50845609 MS.gene47372:CDS 35.0%
AACACTTTCTTACTCTGCTT+CGG + chr1.4:50847775-50847794 MS.gene47372:intron 35.0%
AACATAGTTACGAAGGACTT+GGG - chr1.4:50848354-50848373 None:intergenic 35.0%
AACTGCTCCAAATCACTAAA+TGG - chr1.4:50844602-50844621 None:intergenic 35.0%
AAGAAGAACGAACAGAATGA+TGG - chr1.4:50844430-50844449 None:intergenic 35.0%
ACAATGTCTTGAAGACTTTC+AGG + chr1.4:50847537-50847556 MS.gene47372:intron 35.0%
AGAAATGTGATGACTAATCG+TGG - chr1.4:50847390-50847409 None:intergenic 35.0%
AGAAGAACGAACAGAATGAT+GGG - chr1.4:50844429-50844448 None:intergenic 35.0%
ATAACTGTAAGTACCAGAAC+GGG + chr1.4:50847459-50847478 MS.gene47372:intron 35.0%
ATAATTCTCAGATCGCACTA+GGG + chr1.4:50849522-50849541 MS.gene47372:intron 35.0%
ATACAAACATGCTGTCCATT+TGG - chr1.4:50845591-50845610 None:intergenic 35.0%
ATAGTGGTGACAACTTTGAT+AGG + chr1.4:50846366-50846385 MS.gene47372:CDS 35.0%
ATCAACAATTGATCCGTCTA+AGG + chr1.4:50845788-50845807 MS.gene47372:CDS 35.0%
ATCCATTTAGAAGAGAATGG+TGG - chr1.4:50848645-50848664 None:intergenic 35.0%
ATTTAGTTGGTCACGTTGAA+AGG + chr1.4:50846527-50846546 MS.gene47372:intron 35.0%
CAAAATCGTTATCTCATCCA+GGG - chr1.4:50845493-50845512 None:intergenic 35.0%
CAAATGCATACCTAAAGTCT+GGG - chr1.4:50848043-50848062 None:intergenic 35.0%
CATAACTGTAAGTACCAGAA+CGG + chr1.4:50847458-50847477 MS.gene47372:intron 35.0%
CCAACATTATGAATAAGGCA+TGG - chr1.4:50846900-50846919 None:intergenic 35.0%
CCCAAATTGACTAGAATTAC+AGG - chr1.4:50848453-50848472 None:intergenic 35.0%
CCTCAACTTGTAAAACAAGA+CGG - chr1.4:50848244-50848263 None:intergenic 35.0%
CCTTGGAATACTTTCTTTGA+TGG - chr1.4:50849929-50849948 None:intergenic 35.0%
CGGGATTTCTTCAATAGATA+TGG + chr1.4:50849557-50849576 MS.gene47372:CDS 35.0%
CTTCAGTGAGTGGTTTAATT+GGG - chr1.4:50846693-50846712 None:intergenic 35.0%
GAACCTGTGAAAACAACTTA+CGG + chr1.4:50845041-50845060 MS.gene47372:intron 35.0%
GCTTAGTTATGGGTGTATAA+TGG + chr1.4:50847707-50847726 MS.gene47372:intron 35.0%
GTACTGAAATTAAGGTTGAG+TGG + chr1.4:50847956-50847975 MS.gene47372:intron 35.0%
GTTCCATCATTAATGCTAAG+TGG - chr1.4:50849409-50849428 None:intergenic 35.0%
TAAGCAACCATTTAGACTAC+GGG + chr1.4:50844955-50844974 MS.gene47372:intron 35.0%
TAGAGAATTGATGCCATAGT+TGG + chr1.4:50847617-50847636 MS.gene47372:intron 35.0%
TAGGGATTGAGCAACAATTT+GGG + chr1.4:50844876-50844895 MS.gene47372:intron 35.0%
TAGTGGTGACAACTTTGATA+GGG + chr1.4:50846367-50846386 MS.gene47372:CDS 35.0%
TATAATTCTCAGATCGCACT+AGG + chr1.4:50849521-50849540 MS.gene47372:intron 35.0%
TCAAATGCATACCTAAAGTC+TGG - chr1.4:50848044-50848063 None:intergenic 35.0%
TCCATTTAGAAGAGAATGGT+GGG - chr1.4:50848644-50848663 None:intergenic 35.0%
TGCTCAATCCCTAAAATTCA+AGG - chr1.4:50844869-50844888 None:intergenic 35.0%
TTAGACCATTTCAAGCATTC+TGG + chr1.4:50845564-50845583 MS.gene47372:CDS 35.0%
TTAGGGATTGAGCAACAATT+TGG + chr1.4:50844875-50844894 MS.gene47372:intron 35.0%
TTCAGTGAGTGGTTTAATTG+GGG - chr1.4:50846692-50846711 None:intergenic 35.0%
TTGCCAGTAACAGTTATATG+CGG - chr1.4:50846981-50847000 None:intergenic 35.0%
! AACGATTTTGCAACAGATTG+CGG + chr1.4:50845503-50845522 MS.gene47372:CDS 35.0%
! AAGTGACATGAGTGACTTTT+TGG + chr1.4:50849664-50849683 MS.gene47372:CDS 35.0%
! AAGTGCAAGTTAGTTGACTT+TGG + chr1.4:50846179-50846198 MS.gene47372:CDS 35.0%
! ATGAAGACACAGTTTTCGTT+AGG - chr1.4:50844702-50844721 None:intergenic 35.0%
! ATTTTGCAAGTCATCCTTTG+AGG + chr1.4:50848400-50848419 MS.gene47372:intron 35.0%
! CCATGCCTTATTCATAATGT+TGG + chr1.4:50846897-50846916 MS.gene47372:intron 35.0%
! GCATTAATGATGGAACTTCT+TGG + chr1.4:50849413-50849432 MS.gene47372:CDS 35.0%
! GCATTCCATTCTAGAAATAG+AGG - chr1.4:50848789-50848808 None:intergenic 35.0%
! GCCCTTAAATAAAGTGCTTA+TGG + chr1.4:50849613-50849632 MS.gene47372:CDS 35.0%
! GGTATGCATTTGATGATTCT+TGG + chr1.4:50848051-50848070 MS.gene47372:intron 35.0%
! TAATTTGTAAGCGAGAGAGA+GGG + chr1.4:50848539-50848558 MS.gene47372:intron 35.0%
! TCCTTTAGTTTAACGGGTAA+TGG + chr1.4:50848756-50848775 MS.gene47372:intron 35.0%
! TGAAGACACAGTTTTCGTTA+GGG - chr1.4:50844701-50844720 None:intergenic 35.0%
! TTATAGTTTTCGGTTAACGG+TGG - chr1.4:50846750-50846769 None:intergenic 35.0%
! TTCCCCGTCTAAATTTTTGA+AGG + chr1.4:50846569-50846588 MS.gene47372:intron 35.0%
! TTTAGTGATTTGGAGCAGTT+TGG + chr1.4:50844602-50844621 MS.gene47372:intron 35.0%
! TTTTACTCGCATTTGTGCTT+TGG + chr1.4:50849330-50849349 MS.gene47372:intron 35.0%
! TTTTCTTTGATGTTTGGCGA+GGG - chr1.4:50847294-50847313 None:intergenic 35.0%
! TTTTGCAAGTCATCCTTTGA+GGG + chr1.4:50848401-50848420 MS.gene47372:intron 35.0%
!! ATATGTTTTGAGCTTGCAAC+TGG + chr1.4:50846323-50846342 MS.gene47372:CDS 35.0%
!! CCATCAAAGAAAGTATTCCA+AGG + chr1.4:50849926-50849945 MS.gene47372:CDS 35.0%
!! GAGCCATTGGTTTATTATCT+AGG + chr1.4:50844831-50844850 MS.gene47372:intron 35.0%
!! GCAATCCTCTATTTCTAGAA+TGG + chr1.4:50848781-50848800 MS.gene47372:intron 35.0%
!! TTAATTTGTAAGCGAGAGAG+AGG + chr1.4:50848538-50848557 MS.gene47372:intron 35.0%
!!! AAAGTTGGTTTTCCATCTCA+TGG - chr1.4:50848954-50848973 None:intergenic 35.0%
!!! ACAGTTTTTTTTTCCAGGCA+TGG - chr1.4:50848996-50849015 None:intergenic 35.0%
!!! CGTTGTTGGCTTTATTGTTT+TGG + chr1.4:50845354-50845373 MS.gene47372:intron 35.0%
!!! GCTGCTGTGTTTTATTTAGT+TGG + chr1.4:50846514-50846533 MS.gene47372:intron 35.0%
!!! GTATGGTTTTTGAGTACCTT+GGG + chr1.4:50845607-50845626 MS.gene47372:CDS 35.0%
!!! TATGGTTTTTGAGTACCTTG+GGG + chr1.4:50845608-50845627 MS.gene47372:CDS 35.0%
!!! TGTATGGTTTTTGAGTACCT+TGG + chr1.4:50845606-50845625 MS.gene47372:CDS 35.0%
!!! TGTCTTTGCTTTTTTGTGTG+TGG + chr1.4:50845405-50845424 MS.gene47372:intron 35.0%
AAACAAGCCCGTAGTCTAAA+TGG - chr1.4:50844965-50844984 None:intergenic 40.0%
AACCAATGGCTCATTTGGAT+TGG - chr1.4:50844823-50844842 None:intergenic 40.0%
AATTGAATAGTCTCCCGTTC+TGG - chr1.4:50847475-50847494 None:intergenic 40.0%
AATTTGTAAGCGAGAGAGAG+GGG + chr1.4:50848540-50848559 MS.gene47372:intron 40.0%
ACACATTCTCAACGTGGAAA+GGG + chr1.4:50848210-50848229 MS.gene47372:intron 40.0%
AGAACAAGGACAAAGATGAG+AGG + chr1.4:50849837-50849856 MS.gene47372:CDS 40.0%
AGGACTTGGGATAGTAGAAT+AGG - chr1.4:50848341-50848360 None:intergenic 40.0%
ATCACAGTTTGGCATAAGCA+AGG + chr1.4:50848113-50848132 MS.gene47372:intron 40.0%
ATGAGGTGCAAGCTTAGTTA+TGG + chr1.4:50847696-50847715 MS.gene47372:intron 40.0%
ATTCTACATCTGCGGATCTT+TGG + chr1.4:50846288-50846307 MS.gene47372:CDS 40.0%
CAACATAGTTACGAAGGACT+TGG - chr1.4:50848355-50848374 None:intergenic 40.0%
CACTAGTAGGTTATCAGATG+CGG + chr1.4:50846076-50846095 MS.gene47372:CDS 40.0%
CAGTAAAGACAAGACTATGC+TGG + chr1.4:50845848-50845867 MS.gene47372:CDS 40.0%
CATCACACAACATCCTTGTT+TGG - chr1.4:50849019-50849038 None:intergenic 40.0%
CATCTTTGTCCTTGTTCTTC+TGG - chr1.4:50849835-50849854 None:intergenic 40.0%
CCAGAAACAAAAACCATGAG+AGG + chr1.4:50848268-50848287 MS.gene47372:intron 40.0%
CTCAAGAGACAATAGGCATT+AGG + chr1.4:50847162-50847181 MS.gene47372:intron 40.0%
GAACAAGGACAAAGATGAGA+GGG + chr1.4:50849838-50849857 MS.gene47372:CDS 40.0%
GAGTTAATAGGTTATCCCCA+AGG - chr1.4:50845626-50845645 None:intergenic 40.0%
GATGGTAATCATGAAACCTC+TGG + chr1.4:50845993-50846012 MS.gene47372:CDS 40.0%
GCAAAATCGTTATCTCATCC+AGG - chr1.4:50845494-50845513 None:intergenic 40.0%
GCCATTACCCGTTAAACTAA+AGG - chr1.4:50848760-50848779 None:intergenic 40.0%
GCTTCAGTGAGTGGTTTAAT+TGG - chr1.4:50846694-50846713 None:intergenic 40.0%
GGAATGAAGTCAAAAGAGCA+GGG + chr1.4:50846101-50846120 MS.gene47372:CDS 40.0%
GGACCACTTAGCATTAATGA+TGG + chr1.4:50849403-50849422 MS.gene47372:intron 40.0%
GGTCAGACTTGAGATTCAAT+TGG + chr1.4:50848483-50848502 MS.gene47372:intron 40.0%
GTGCGCATCAAAATCATGTA+TGG + chr1.4:50846828-50846847 MS.gene47372:intron 40.0%
GTTTCTCAGGAACAAAGTCA+AGG - chr1.4:50849697-50849716 None:intergenic 40.0%
TAATTCTCAGATCGCACTAG+GGG + chr1.4:50849523-50849542 MS.gene47372:intron 40.0%
TACTTCTGACCAGAAGAACA+AGG + chr1.4:50849823-50849842 MS.gene47372:CDS 40.0%
TAGGGTGATTGCATGTTGAT+TGG + chr1.4:50847823-50847842 MS.gene47372:intron 40.0%
TCAAAGTTGTCACCACTATG+AGG - chr1.4:50846365-50846384 None:intergenic 40.0%
TCCCACCATTCTCTTCTAAA+TGG + chr1.4:50848640-50848659 MS.gene47372:intron 40.0%
TCGCATTTGTGCTTTGGTTA+TGG + chr1.4:50849336-50849355 MS.gene47372:intron 40.0%
TCTCTTGCAGAACTTGCATT+CGG - chr1.4:50846035-50846054 None:intergenic 40.0%
TGACTAATCGTGGAAACACA+TGG - chr1.4:50847380-50847399 None:intergenic 40.0%
TGAGGTGCAAGCTTAGTTAT+GGG + chr1.4:50847697-50847716 MS.gene47372:intron 40.0%
TGATGCCATAGTTGGAAACA+TGG + chr1.4:50847625-50847644 MS.gene47372:intron 40.0%
TGGAATGAAGTCAAAAGAGC+AGG + chr1.4:50846100-50846119 MS.gene47372:CDS 40.0%
TGGATTCTCAAGACAGTGAT+GGG - chr1.4:50848724-50848743 None:intergenic 40.0%
TGGGTAGCCATTTAGTGATT+TGG + chr1.4:50844592-50844611 MS.gene47372:intron 40.0%
TTAACCACACATTCTCAACG+TGG + chr1.4:50848204-50848223 MS.gene47372:intron 40.0%
TTCAAGCATTCTGGTCCAAA+TGG + chr1.4:50845573-50845592 MS.gene47372:CDS 40.0%
TTCTGGCAACATAGTTACGA+AGG - chr1.4:50848361-50848380 None:intergenic 40.0%
TTGATCCAAGGATAACCTCT+GGG - chr1.4:50846265-50846284 None:intergenic 40.0%
TTGGACCAGAATGCTTGAAA+TGG - chr1.4:50845572-50845591 None:intergenic 40.0%
TTGGATTCTCAAGACAGTGA+TGG - chr1.4:50848725-50848744 None:intergenic 40.0%
TTGTTGTGAAGATGACGTGT+TGG + chr1.4:50846955-50846974 MS.gene47372:intron 40.0%
TTTGATCCAAGGATAACCTC+TGG - chr1.4:50846266-50846285 None:intergenic 40.0%
TTTGATGGAGAATGCATGAG+TGG - chr1.4:50849914-50849933 None:intergenic 40.0%
! AATGGTGGGAAGTCATTTGT+GGG - chr1.4:50848630-50848649 None:intergenic 40.0%
! ATCCTTTGAGGGAGTCAAAA+TGG + chr1.4:50848412-50848431 MS.gene47372:intron 40.0%
! ATTTTCTGTGCCTTCGTCTT+CGG - chr1.4:50844288-50844307 None:intergenic 40.0%
! ATTTTGCAACAGATTGCGGA+GGG + chr1.4:50845507-50845526 MS.gene47372:CDS 40.0%
! CATTTGATGATTCTTGGCCT+CGG + chr1.4:50848057-50848076 MS.gene47372:intron 40.0%
! CTTTTCTTTGATGTTTGGCG+AGG - chr1.4:50847295-50847314 None:intergenic 40.0%
! GCAAGGAGGGTAAAGTTTTA+TGG + chr1.4:50848130-50848149 MS.gene47372:intron 40.0%
! GTGATTTGAGACATATCCGT+CGG + chr1.4:50849579-50849598 MS.gene47372:CDS 40.0%
! GTTACTGGCAACATTGATTG+TGG + chr1.4:50846990-50847009 MS.gene47372:intron 40.0%
! GTTTGCAGTTAACTTGAGTC+TGG + chr1.4:50849496-50849515 MS.gene47372:intron 40.0%
! TCACGGATTGCCTATCAATA+TGG + chr1.4:50845665-50845684 MS.gene47372:CDS 40.0%
! TGATTAGAAGACGGCATTGA+TGG - chr1.4:50849782-50849801 None:intergenic 40.0%
! TGATTTGGAGCAGTTTGGAT+TGG + chr1.4:50844607-50844626 MS.gene47372:intron 40.0%
!! ATGCCGTAAGTTGTTTTCAC+AGG - chr1.4:50845047-50845066 None:intergenic 40.0%
!! CCTCTCATGGTTTTTGTTTC+TGG - chr1.4:50848271-50848290 None:intergenic 40.0%
!! TTGACTTTGGTAATGCTTGC+TGG + chr1.4:50846192-50846211 MS.gene47372:CDS 40.0%
!!! CCGTCTTGTTTTACAAGTTG+AGG + chr1.4:50848241-50848260 MS.gene47372:intron 40.0%
!!! TTTTGATTTCCCAGCCTGAT+TGG + chr1.4:50848675-50848694 MS.gene47372:intron 40.0%
AACTTCTTGGAATGATGCCG+CGG + chr1.4:50849426-50849445 MS.gene47372:CDS 45.0%
AAGTAGCAGTTTCAGCACCA+GGG - chr1.4:50849808-50849827 None:intergenic 45.0%
AATTCTCAGATCGCACTAGG+GGG + chr1.4:50849524-50849543 MS.gene47372:intron 45.0%
ACAGTTTGGCATAAGCAAGG+AGG + chr1.4:50848116-50848135 MS.gene47372:intron 45.0%
ACTTTCTTACTCTGCTTCGG+TGG + chr1.4:50847778-50847797 MS.gene47372:intron 45.0%
AGATGATTCTACAGCACCAG+AGG - chr1.4:50846012-50846031 None:intergenic 45.0%
AGCCAATCCAAATGAGCCAT+TGG + chr1.4:50844818-50844837 MS.gene47372:intron 45.0%
AGTAGGTTATCAGATGCGGA+TGG + chr1.4:50846080-50846099 MS.gene47372:CDS 45.0%
CACACATTCTCAACGTGGAA+AGG + chr1.4:50848209-50848228 MS.gene47372:intron 45.0%
CAGTTTGGCATAAGCAAGGA+GGG + chr1.4:50848117-50848136 MS.gene47372:intron 45.0%
CCAGGGTTGTGATTAGAAGA+CGG - chr1.4:50849791-50849810 None:intergenic 45.0%
CTACATCCGTGGATGAATGT+AGG + chr1.4:50849740-50849759 MS.gene47372:CDS 45.0%
CTTTCCACGTTGAGAATGTG+TGG - chr1.4:50848211-50848230 None:intergenic 45.0%
GATTTCCTGGGATCCTTAGA+CGG - chr1.4:50845804-50845823 None:intergenic 45.0%
GTGGCAGCATACAAAACACA+AGG - chr1.4:50848156-50848175 None:intergenic 45.0%
TATGTCGTTCAGAGCAAGCT+TGG + chr1.4:50844365-50844384 MS.gene47372:CDS 45.0%
TCTAAGGATCCCAGGAAATC+TGG + chr1.4:50845804-50845823 MS.gene47372:CDS 45.0%
TGACAACTTTGATAGGGACG+AGG + chr1.4:50846373-50846392 MS.gene47372:CDS 45.0%
TGGAGATTTGCAGAGATACG+TGG + chr1.4:50845425-50845444 MS.gene47372:intron 45.0%
TGGCCGCATATAACTGTTAC+TGG + chr1.4:50846975-50846994 MS.gene47372:intron 45.0%
TGGGATGTAATTAAGGTGGC+AGG + chr1.4:50847727-50847746 MS.gene47372:intron 45.0%
TTCTCAACGTGGAAAGGGAT+AGG + chr1.4:50848215-50848234 MS.gene47372:intron 45.0%
TTTCCCAGCCTGATTGGATA+AGG + chr1.4:50848681-50848700 MS.gene47372:intron 45.0%
! ATGGTGGGAAGTCATTTGTG+GGG - chr1.4:50848629-50848648 None:intergenic 45.0%
! ATTGATGGCTCCAAAAGACG+GGG - chr1.4:50849767-50849786 None:intergenic 45.0%
! CATTGATGGCTCCAAAAGAC+GGG - chr1.4:50849768-50849787 None:intergenic 45.0%
! CTTTGAGGGAGTCAAAATGG+TGG + chr1.4:50848415-50848434 MS.gene47372:intron 45.0%
! GAATGGTGGGAAGTCATTTG+TGG - chr1.4:50848631-50848650 None:intergenic 45.0%
! GACTACGGGCTTGTTTGAAT+TGG + chr1.4:50844969-50844988 MS.gene47372:intron 45.0%
! GATTTTGCAACAGATTGCGG+AGG + chr1.4:50845506-50845525 MS.gene47372:CDS 45.0%
! GCATTGATGGCTCCAAAAGA+CGG - chr1.4:50849769-50849788 None:intergenic 45.0%
!! GAACAAGCTTCTAGTTCTGC+TGG + chr1.4:50846053-50846072 MS.gene47372:CDS 45.0%
!! TAACTTGCTTTGCTGGAGAG+TGG + chr1.4:50849245-50849264 MS.gene47372:intron 45.0%
!!! CACCATTTTGACTCCCTCAA+AGG - chr1.4:50848417-50848436 None:intergenic 45.0%
AAAGAGCAGGGCAACAGAAG+AGG + chr1.4:50846113-50846132 MS.gene47372:CDS 50.0%
AAAGCCAAGCAAGCAGCTCA+TGG + chr1.4:50845945-50845964 MS.gene47372:CDS 50.0%
ACAGAAAATTACCGTCGCGG+TGG + chr1.4:50844299-50844318 MS.gene47372:CDS 50.0%
ACATCCATGAGCTGCTTGCT+TGG - chr1.4:50845952-50845971 None:intergenic 50.0%
ATTCTCAGATCGCACTAGGG+GGG + chr1.4:50849525-50849544 MS.gene47372:intron 50.0%
CAACCGTGCCTTATCCAATC+AGG - chr1.4:50848692-50848711 None:intergenic 50.0%
CAAGGACAAAGATGAGAGGG+AGG + chr1.4:50849841-50849860 MS.gene47372:CDS 50.0%
CAGCCTGATTGGATAAGGCA+CGG + chr1.4:50848686-50848705 MS.gene47372:intron 50.0%
CATGGAATGGTACACAGCCA+GGG + chr1.4:50846806-50846825 MS.gene47372:intron 50.0%
CATTCATCCACGGATGTAGC+AGG - chr1.4:50849739-50849758 None:intergenic 50.0%
CCAAGCATCAGAGAAAACCG+AGG - chr1.4:50848077-50848096 None:intergenic 50.0%
CCGTCTTCTAATCACAACCC+TGG + chr1.4:50849788-50849807 MS.gene47372:CDS 50.0%
CGTTCAGAGCAAGCTTGGTT+GGG + chr1.4:50844370-50844389 MS.gene47372:CDS 50.0%
CTGAAGCAAAACCCCTATGC+TGG + chr1.4:50846707-50846726 MS.gene47372:intron 50.0%
CTTGCACTTGACATCAGCTG+AGG - chr1.4:50846168-50846187 None:intergenic 50.0%
GAAGTAGCAGTTTCAGCACC+AGG - chr1.4:50849809-50849828 None:intergenic 50.0%
GAGTGCTCAGCATTACACAG+AGG + chr1.4:50845464-50845483 MS.gene47372:CDS 50.0%
GATTTCACCTCCGAAGACGA+AGG + chr1.4:50844275-50844294 MS.gene47372:CDS 50.0%
GCAGTTTCTGTCTCACTGTG+CGG - chr1.4:50846142-50846161 None:intergenic 50.0%
GGCACAGAAAATTACCGTCG+CGG + chr1.4:50844296-50844315 MS.gene47372:CDS 50.0%
GGGGTCATTTCTCCACTGTT+TGG + chr1.4:50844390-50844409 MS.gene47372:CDS 50.0%
GTGCCTTATCCAATCAGGCT+GGG - chr1.4:50848687-50848706 None:intergenic 50.0%
GTTCAGAGCAAGCTTGGTTG+GGG + chr1.4:50844371-50844390 MS.gene47372:CDS 50.0%
GTTTCCAATTCCAGCCTCCA+TGG - chr1.4:50849867-50849886 None:intergenic 50.0%
TAGGCGTCTGCATCTTGTTC+AGG - chr1.4:50848322-50848341 None:intergenic 50.0%
TAGGGATGGGGGAATCAATC+AGG - chr1.4:50848514-50848533 None:intergenic 50.0%
TCAACGTGGAAAGGGATAGG+TGG + chr1.4:50848218-50848237 MS.gene47372:intron 50.0%
TCATGGAATGGTACACAGCC+AGG + chr1.4:50846805-50846824 MS.gene47372:intron 50.0%
TCGTTCAGAGCAAGCTTGGT+TGG + chr1.4:50844369-50844388 MS.gene47372:CDS 50.0%
TGCAATTGGACAACCATGCC+TGG + chr1.4:50848980-50848999 MS.gene47372:intron 50.0%
TGGTGGGAAGTCATTTGTGG+GGG - chr1.4:50848628-50848647 None:intergenic 50.0%
TTGATCCGTCTAAGGATCCC+AGG + chr1.4:50845796-50845815 MS.gene47372:CDS 50.0%
! AGGGGTTTTGCTTCAGTGAG+TGG - chr1.4:50846703-50846722 None:intergenic 50.0%
! CAGTTGCCTCGACTTGTTTC+TGG - chr1.4:50848298-50848317 None:intergenic 50.0%
! CCTCGGTTTTCTCTGATGCT+TGG + chr1.4:50848074-50848093 MS.gene47372:intron 50.0%
! GAATGTAGGTCCCCGTCTTT+TGG + chr1.4:50849754-50849773 MS.gene47372:CDS 50.0%
! GCTCTGAACGACATAACGAC+CGG - chr1.4:50844360-50844379 None:intergenic 50.0%
! GGAGGTGAAATCGCTGCTTT+CGG - chr1.4:50844267-50844286 None:intergenic 50.0%
!! AAGAGGAGCACCAGATTTCC+TGG - chr1.4:50845817-50845836 None:intergenic 50.0%
!! AGAGGAGCACCAGATTTCCT+GGG - chr1.4:50845816-50845835 None:intergenic 50.0%
!! CATGATTTTGATGCGCACCC+TGG - chr1.4:50846826-50846845 None:intergenic 50.0%
!! CTAGTTCTGCTGGCACTAGT+AGG + chr1.4:50846063-50846082 MS.gene47372:CDS 50.0%
!! GAAGGTATCGCCGATTCGAA+CGG - chr1.4:50844333-50844352 None:intergenic 50.0%
!! GAGAAGGAGGCATCTGAAGA+TGG + chr1.4:50845975-50845994 MS.gene47372:CDS 50.0%
!! TGTTTCTGGTCTGCCTCTCA+TGG - chr1.4:50848284-50848303 None:intergenic 50.0%
AGCTCATGGATGTGCGGAGA+AGG + chr1.4:50845959-50845978 MS.gene47372:CDS 55.0%
ATCCCAAGCGAGCCAAACAG+TGG - chr1.4:50844405-50844424 None:intergenic 55.0%
ATCGGCGATACCTTCAGCTC+CGG + chr1.4:50844338-50844357 MS.gene47372:CDS 55.0%
CAAAGATGAGAGGGAGGCCA+TGG + chr1.4:50849847-50849866 MS.gene47372:CDS 55.0%
CCTGAGAAACGACCTACAGC+CGG + chr1.4:50849707-50849726 MS.gene47372:CDS 55.0%
CGGGGACCTACATTCATCCA+CGG - chr1.4:50849749-50849768 None:intergenic 55.0%
CGTGCCTTATCCAATCAGGC+TGG - chr1.4:50848688-50848707 None:intergenic 55.0%
GACATAACGACCGGAGCTGA+AGG - chr1.4:50844351-50844370 None:intergenic 55.0%
GCAAGCAGCTCATGGATGTG+CGG + chr1.4:50845953-50845972 MS.gene47372:CDS 55.0%
GGAAGTCATTTGTGGGGGGA+AGG - chr1.4:50848623-50848642 None:intergenic 55.0%
GGCAGACCAGAAACAAGTCG+AGG + chr1.4:50848289-50848308 MS.gene47372:intron 55.0%
GGTGGGAAGTCATTTGTGGG+GGG - chr1.4:50848627-50848646 None:intergenic 55.0%
GTCAATGCCTGCTACATCCG+TGG + chr1.4:50849729-50849748 MS.gene47372:CDS 55.0%
TCATGGATGTGCGGAGAAGG+AGG + chr1.4:50845962-50845981 MS.gene47372:CDS 55.0%
TCTTGGAATGATGCCGCGGA+AGG + chr1.4:50849430-50849449 MS.gene47372:CDS 55.0%
TGTAAGCGAGAGAGAGGGGA+AGG + chr1.4:50848544-50848563 MS.gene47372:intron 55.0%
TTCTGTGCCTTCGTCTTCGG+AGG - chr1.4:50844285-50844304 None:intergenic 55.0%
! ATATCCGTCGGCTGCGATTC+TGG + chr1.4:50849591-50849610 MS.gene47372:CDS 55.0%
! CTCCACTGTTTGGCTCGCTT+GGG + chr1.4:50844400-50844419 MS.gene47372:CDS 55.0%
! GAAATCGCTGCTTTCGGTGG+TGG - chr1.4:50844261-50844280 None:intergenic 55.0%
! GGTGAAATCGCTGCTTTCGG+TGG - chr1.4:50844264-50844283 None:intergenic 55.0%
! TCTCCACTGTTTGGCTCGCT+TGG + chr1.4:50844399-50844418 MS.gene47372:CDS 55.0%
!! AAGACAGTATCGGTGCCCAG+AGG + chr1.4:50846247-50846266 MS.gene47372:CDS 55.0%
!! CGGATGTAGCAGGCATTGAC+CGG - chr1.4:50849729-50849748 None:intergenic 55.0%
AAGCGAGAGAGAGGGGAAGG+AGG + chr1.4:50848547-50848566 MS.gene47372:intron 60.0%
AGATGAGAGGGAGGCCATGG+AGG + chr1.4:50849850-50849869 MS.gene47372:CDS 60.0%
CCGGCTGTAGGTCGTTTCTC+AGG - chr1.4:50849710-50849729 None:intergenic 60.0%
CGGTGCCCAGAGGTTATCCT+TGG + chr1.4:50846257-50846276 MS.gene47372:CDS 60.0%
GAGGCCATGGAGGCTGGAAT+TGG + chr1.4:50849860-50849879 MS.gene47372:CDS 60.0%
GCATTACACAGAGGCTGCCC+TGG + chr1.4:50845473-50845492 MS.gene47372:CDS 60.0%
GGCTACCACGCCGTTCGAAT+CGG + chr1.4:50844320-50844339 MS.gene47372:CDS 60.0%
!! ACTAGGGGGGCGTTATTCCC+GGG + chr1.4:50849538-50849557 MS.gene47372:CDS 60.0%
!! AGCAGGCATTGACCGGCTGT+AGG - chr1.4:50849722-50849741 None:intergenic 60.0%
!! CACTAGGGGGGCGTTATTCC+CGG + chr1.4:50849537-50849556 MS.gene47372:CDS 60.0%
!! TATCGCCGATTCGAACGGCG+TGG - chr1.4:50844328-50844347 None:intergenic 60.0%
AGGGCCAGAATCGCAGCCGA+CGG - chr1.4:50849598-50849617 None:intergenic 65.0%
GAGAGGGAGGCCATGGAGGC+TGG + chr1.4:50849854-50849873 MS.gene47372:CDS 70.0%
CGGCGTGGTAGCCACCGCGA+CGG - chr1.4:50844313-50844332 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 50844236 50849961 50844236 ID=MS.gene47372
chr1.4 mRNA 50844236 50849961 50844236 ID=MS.gene47372.t1;Parent=MS.gene47372
chr1.4 exon 50844236 50844436 50844236 ID=MS.gene47372.t1.exon1;Parent=MS.gene47372.t1
chr1.4 CDS 50844236 50844436 50844236 ID=cds.MS.gene47372.t1;Parent=MS.gene47372.t1
chr1.4 exon 50845438 50846394 50845438 ID=MS.gene47372.t1.exon2;Parent=MS.gene47372.t1
chr1.4 CDS 50845438 50846394 50845438 ID=cds.MS.gene47372.t1;Parent=MS.gene47372.t1
chr1.4 exon 50849404 50849451 50849404 ID=MS.gene47372.t1.exon3;Parent=MS.gene47372.t1
chr1.4 CDS 50849404 50849451 50849404 ID=cds.MS.gene47372.t1;Parent=MS.gene47372.t1
chr1.4 exon 50849533 50849961 50849533 ID=MS.gene47372.t1.exon4;Parent=MS.gene47372.t1
chr1.4 CDS 50849533 50849961 50849533 ID=cds.MS.gene47372.t1;Parent=MS.gene47372.t1
Gene Sequence

>MS.gene47372

ATGGGTGGCGGACACGACGATACCACCACCGAAAGCAGCGATTTCACCTCCGAAGACGAAGGCACAGAAAATTACCGTCGCGGTGGCTACCACGCCGTTCGAATCGGCGATACCTTCAGCTCCGGTCGTTATGTCGTTCAGAGCAAGCTTGGTTGGGGTCATTTCTCCACTGTTTGGCTCGCTTGGGATTCCCATCATTCTGTTCGTTCTTCTTCCCCTAAAAATCTTCTCTTTTTACATTTTTTTTTTATATTTATTTAATCACAAATTTCATTTTTTTTATTAAGTTTTTTTTTTAATGTTTTTGGTTGAACAATTTGAGGGATTAAGTAAATGATACTTTGAATTTTAGGGATTGGGTAGCCATTTAGTGATTTGGAGCAGTTTGGATTGGCTTATTTTTGAGCTTATGAACAATAGCTTATGTAAATAAATAAGCTTTTGTGTTAATTCATAAGTTCTCCCTAACGAAAACTGTGTCTTCATAAGCTGTTTTTTCATAAACTACCTTGACAAGCTTATGAATAATAGATAAAAGCTTATTTATTTACATAAGCTCCTTTGCATAAGCTAAAAAAAATAAGCCAATCCAAATGAGCCATTGGTTTATTATCTAGGAAGAATAGAATACCTTGAATTTTAGGGATTGAGCAACAATTTGGGTATTGAGCAATTTAATTTATATCTAGGAAGAAAATAATGCTTTGAATTTTAGGGATTAAGCAACCATTTAGACTACGGGCTTGTTTGAATTGGCTTATTTCAACTTATCTATTGACATAAACAATTCTGAGACTGATTAAGAGAACCTGTGAAAACAACTTACGGCATGTTCATAAGCTGTTTTCAGCTTATTTTCATGACCTCTCTAAGATAGCTTATGAAAACAACTTATAGCTTATATGGGAAAAAGTAACTTTCTTTTATCTTTTGTTATAGAAATGATTTATACATAAGCGCTTATCATCAGTTTATGTTATAAGCTGGAAATTAACTGTTCATCCAAACATTGGGACAGTTTTTATCTTTTGTTTTTGGCCATATTGTTTTGGTTTGACATGTTTTTCACATTATTAGTTTGTCTTTGCTTTTTTGTGTTTTGGACAGTTTTTATTTGTCGTTGTTGGCTTTATTGTTTTGGTTTGACATGTTTTTTCACATTATTAGTTTGTCTTTGCTTTTTTGTGTGTGGAGATTTGCAGAGATACGTGGCTTTGAAAGTTCAGAAGAGTGCTCAGCATTACACAGAGGCTGCCCTGGATGAGATAACGATTTTGCAACAGATTGCGGAGGGAGACACTGATGATAAAAAATGTGTGGTCAAGCTTTTAGACCATTTCAAGCATTCTGGTCCAAATGGACAGCATGTTTGTATGGTTTTTGAGTACCTTGGGGATAACCTATTAACTCTTATTAAGTATAGTGATTATCACGGATTGCCTATCAATATGGTTAAAGAGATATGCTTTCATATTTTGGTTGGATTGGATTACTTACATAAGCAGCTTTCTATCATACATACTGACTTAAAACCCGAAAATATCCTTCTCTTATCAACAATTGATCCGTCTAAGGATCCCAGGAAATCTGGTGCTCCTCTTATTCTTCCTAACAGTAAAGACAAGACTATGCTGGAGTCAACGACTGCAAGAGACACTAAAACATCAAATGGAGATTTTATTAAGAATCATAAGAAAAATATTAAGAGAAAAGCCAAGCAAGCAGCTCATGGATGTGCGGAGAAGGAGGCATCTGAAGATGGTAATCATGAAACCTCTGGTGCTGTAGAATCATCTCCGAATGCAAGTTCTGCAAGAGAACAAGCTTCTAGTTCTGCTGGCACTAGTAGGTTATCAGATGCGGATGGAATGAAGTCAAAAGAGCAGGGCAACAGAAGAGGAAGCCGCACAGTGAGACAGAAACTGCTTGCCTCAGCTGATGTCAAGTGCAAGTTAGTTGACTTTGGTAATGCTTGCTGGACATATAAACAGTTTACAAATGATATTCAGACAAGACAGTATCGGTGCCCAGAGGTTATCCTTGGATCAAAATATTCTACATCTGCGGATCTTTGGTCATTTGCTTGCATATGTTTTGAGCTTGCAACTGGAGATGTATTATTTGATCCTCATAGTGGTGACAACTTTGATAGGGACGAGGTAAGAATTTTTTTATTTACGTATTTAGACGTTCTATGCTTTTATGTCATCATTCCTACTCTACATAGCGAAAATATTATTTATGTGTTAATAGGTTGCTGGAATTGATTAATTGTATGGCTGCTGTGTTTTATTTAGTTGGTCACGTTGAAAGGATTATCTATGTGTAAACTTTTCCCCGTCTAAATTTTTGAAGGTTTTAATAAAACAACACATACAGATACACTACTTGATGTAAGACAGAAATTCACATTTTAACGAATCCTGTAATACAAAGCTCTAATATCATAAAAACCCCAATTAAACCACTCACTGAAGCAAAACCCCTATGCTGGAATAGCATTTTTTAAAACCACCGTTAACCGAAAACTATAATTTTAACTATTTATGAATTGGGAATTGACTAAATATCATGGAATGGTACACAGCCAGGGTGCGCATCAAAATCATGTATGGAGCTTACTGAATGATATGTATGCTGCTTTACATTTTATGTAACATCCCATGCCTTATTCATAATGTTGGCCTTTTCACGTTTTCTTGTTTATATGAGGGGACTTTTGTTGTGAAGATGACGTGTTGGCCGCATATAACTGTTACTGGCAACATTGATTGTGGAGAATTTTGAAGCATAAGCTGACTATCTCAACTGTTAAACATGAATAATGAGTGCTGGAAGTTTCTAATTCAATTTGTATATTAAAGAATGTGCTTAAATTTTTATTTTTGTTGTAAAAAATGAGTTTTAGAAGAGGGGAAGAAAAAATCTCAAGAGACAATAGGCATTAGGCCGTCTTCTAAAACAGAGATAGAAAAGGGAATTTTTTTTCTTTGAATTTCACTACAGAAAAGTTACCCAGTCTTGATAGAAAGTAGAAACAATGTTATAAAGATGACCCTCGCCAAACATCAAAGAAAAGTCAAATATAAATTCTGTCAAAAAGGTACATGAGCTAAAATCATTCTTTTACAAAGGCAGAGTCCATGTGTTTCCACGATTAGTCATCACATTTCTAGCAATAATGATGTCAATAGGGAGTGTTTTGATGAGTTTGTAATAAAACATAACTGTAAGTACCAGAACGGGAGACTATTCAATTACAAATGTGTGCAATTAATGATCTTTTATACATTATCCTTTTACAATGTCTTGAAGACTTTCAGGATAAGAACCTACCTGAATTTATCTATTAGATGACCTTATTATGGTTAATGAGACAAATAGAGAATTGATGCCATAGTTGGAAACATGGAAAAATCTTTATTTCTCAAGGTTTTCAACAAACCTAAAAAGCTCTATTATGAGGTGCAAGCTTAGTTATGGGTGTATAATGGGATGTAATTAAGGTGGCAGGTAATGATAAGAAGCACATAAGGTTAAACACTTTCTTACTCTGCTTCGGTGGCAGTAAGATTTTCCTATATAATTAGGGTGATTGCATGTTGATTGGTGAAAAGCATGTTAATTTATGTGATCTGAAAAAAAACACTAGTATGGGTTCTATATAAAAAATAGTACTGATACTACACTATAATGATAATTAAGAAACCACATTTCCATGTACTGAAATTAAGGTTGAGTGGGTAGTGACACAAAATGAATAGAAGATGAATGATGCAAATTTTAGGCTTGCATTTTATAAAGCCCAGACTTTAGGTATGCATTTGATGATTCTTGGCCTCGGTTTTCTCTGATGCTTGGAGCAGTTTCTGATAAGATCACAGTTTGGCATAAGCAAGGAGGGTAAAGTTTTATGGCCTTGTGTTTTGTATGCTGCCACACATTCCTTATAGTAAAAAGCATGGTTATTAACCACACATTCTCAACGTGGAAAGGGATAGGTGGCCGTCTTGTTTTACAAGTTGAGGCTGACCAGAAACAAAAACCATGAGAGGCAGACCAGAAACAAGTCGAGGCAACTGTCCTGAACAAGATGCAGACGCCTATTCTACTATCCCAAGTCCTTCGTAACTATGTTGCCAGAATTTCACAATTCACAATTTAATTTTGCAAGTCATCCTTTGAGGGAGTCAAAATGGTGGATAAATTTTTATCCTGTAATTCTAGTCAATTTGGGAAATGATTTGGGTCAGACTTGAGATTCAATTGGAAAATCCTGATTGATTCCCCCATCCCTATTTATTAATTTGTAAGCGAGAGAGAGGGGAAGGAGGAAAAGCCCTTCTATTTCATATTTCAAAACAATCAATCAAAACTAAATTAGCCTTCCCCCCACAAATGACTTCCCACCATTCTCTTCTAAATGGATTTTATGGAAATTTTGATTTCCCAGCCTGATTGGATAAGGCACGGTTGTTGTTGATGCCCATCACTGTCTTGAGAATCCAACTTTATTATCTTCCTTTAGTTTAACGGGTAATGGCAGCAATCCTCTATTTCTAGAATGGAATGCATAAATCTTGATTAGCTCATAGCTTGTTGTACTTCTAACATCTTGGTTTTGAACTGTAATGATTGTCACCTTTTAAAATCATTTTAAGTTCGAAAAGATGATTTTTATACTACGGATAACATTTAGTTACAAATATTATGGTCCATGAGATGGAAAACCAACTTTATAGTTTGCAATTGGACAACCATGCCTGGAAAAAAAAACTGTCCAAACAAGGATGTTGTGTGATGTCTGTTAGTTAACTACCTGAACTGAGTATTAGATAAAGTAAAATTTGAACTTACTAATGGATAAAAACACACTTACACCAAAATATATCATGCAAATCAATTACTTCAGGCTGATTATTTTTTTGTTGAGGAAATGGTTTGGTTTGTGTTCTGTTTTTTAATGCTACTTACTGGATGTGTGCTTATGCATTCCAGTTTCAACATAATAACTTGCTTTGCTGGAGAGTGGCCATGTTGATTCTTTTGTTATGTTAGTTCTATCTTTAATTAATACTAACATTTTGAAATAATTTTTACTCGCATTTGTGCTTTGGTTATGGTATTAATGTCTGATGTAAGCTTGCTCTATCTTTAATTTATCTCAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCGCGGAAGGTAATAAATTTCTTCCATCCATTTCTTTTCATTTATGATCATTAGTTTGCAGTTAACTTGAGTCTGGATTATAATTCTCAGATCGCACTAGGGGGGCGTTATTCCCGGGATTTCTTCAATAGATATGGTGATTTGAGACATATCCGTCGGCTGCGATTCTGGCCCTTAAATAAAGTGCTTATGGAGAAGTACGATTTTAGTGAGAAAGATGCAAGTGACATGAGTGACTTTTTGGTTTCTATCCTTGACTTTGTTCCTGAGAAACGACCTACAGCCGGTCAATGCCTGCTACATCCGTGGATGAATGTAGGTCCCCGTCTTTTGGAGCCATCAATGCCGTCTTCTAATCACAACCCTGGTGCTGAAACTGCTACTTCTGACCAGAAGAACAAGGACAAAGATGAGAGGGAGGCCATGGAGGCTGGAATTGGAAACATTGCTATCAATTCAGATTCTAAACCACTCATGCATTCTCCATCAAAGAAAGTATTCCAAGGCAGCCGCAAGTAG
Protein sequence

>MS.gene47372.t1

MGGGHDDTTTESSDFTSEDEGTENYRRGGYHAVRIGDTFSSGRYVVQSKLGWGHFSTVWLAWDSHHSRYVALKVQKSAQHYTEAALDEITILQQIAEGDTDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYHGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSTIDPSKDPRKSGAPLILPNSKDKTMLESTTARDTKTSNGDFIKNHKKNIKRKAKQAAHGCAEKEASEDGNHETSGAVESSPNASSAREQASSSAGTSRLSDADGMKSKEQGNRRGSRTVRQKLLASADVKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDASDMSDFLVSILDFVPEKRPTAGQCLLHPWMNVGPRLLEPSMPSSNHNPGAETATSDQKNKDKDEREAMEAGIGNIAINSDSKPLMHSPSKKVFQGSRK