Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49880.t1 | XP_003621550.1 | 97.3 | 441 | 12 | 0 | 1 | 441 | 1 | 441 | 1.10E-246 | 862.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49880.t1 | Q9M3B4 | 51.4 | 440 | 199 | 8 | 1 | 434 | 1 | 431 | 2.6e-122 | 440.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49880.t1 | Q2HSF1 | 97.3 | 441 | 12 | 0 | 1 | 441 | 1 | 441 | 8.3e-247 | 862.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056304 | MS.gene49880 | 0.966265 | 1.09E-125 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72659 | MS.gene49880 | PPI |
| MS.gene49880 | MS.gene27974 | PPI |
| MS.gene49880 | MS.gene65332 | PPI |
| MS.gene49880 | MS.gene030899 | PPI |
| MS.gene004849 | MS.gene49880 | PPI |
| MS.gene69969 | MS.gene49880 | PPI |
| MS.gene066499 | MS.gene49880 | PPI |
| MS.gene49880 | MS.gene07384 | PPI |
| MS.gene49880 | MS.gene004394 | PPI |
| MS.gene47936 | MS.gene49880 | PPI |
| MS.gene52951 | MS.gene49880 | PPI |
| MS.gene05830 | MS.gene49880 | PPI |
| MS.gene96258 | MS.gene49880 | PPI |
| MS.gene49880 | MS.gene64891 | PPI |
| MS.gene99555 | MS.gene49880 | PPI |
| MS.gene49880 | MS.gene53503 | PPI |
| MS.gene002713 | MS.gene49880 | PPI |
| MS.gene23814 | MS.gene49880 | PPI |
| MS.gene85555 | MS.gene49880 | PPI |
| MS.gene49880 | MS.gene86544 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49880.t1 | MTR_7g016970 | 97.279 | 441 | 12 | 0 | 1 | 441 | 1 | 441 | 0.0 | 894 |
| MS.gene49880.t1 | MTR_1g034785 | 71.719 | 442 | 118 | 6 | 1 | 440 | 1 | 437 | 0.0 | 630 |
| MS.gene49880.t1 | MTR_4g103760 | 32.615 | 371 | 229 | 7 | 5 | 366 | 9 | 367 | 1.66e-57 | 196 |
| MS.gene49880.t1 | MTR_8g054430 | 26.444 | 450 | 277 | 15 | 3 | 441 | 4 | 410 | 8.92e-32 | 126 |
| MS.gene49880.t1 | MTR_1g072140 | 24.206 | 252 | 166 | 8 | 79 | 326 | 69 | 299 | 1.11e-12 | 68.9 |
| MS.gene49880.t1 | MTR_4g119620 | 21.862 | 247 | 166 | 6 | 82 | 323 | 81 | 305 | 2.73e-12 | 67.8 |
| MS.gene49880.t1 | MTR_7g016980 | 81.081 | 37 | 7 | 0 | 270 | 306 | 21 | 57 | 3.85e-12 | 64.3 |
| MS.gene49880.t1 | MTR_2g436510 | 24.000 | 225 | 146 | 8 | 80 | 302 | 213 | 414 | 6.95e-12 | 67.4 |
| MS.gene49880.t1 | MTR_7g076230 | 25.490 | 255 | 153 | 7 | 72 | 311 | 319 | 551 | 8.69e-12 | 67.8 |
| MS.gene49880.t1 | MTR_1g021590 | 29.858 | 211 | 115 | 8 | 117 | 318 | 215 | 401 | 1.51e-11 | 66.6 |
| MS.gene49880.t1 | MTR_3g106080 | 24.793 | 242 | 159 | 5 | 91 | 331 | 431 | 650 | 1.70e-11 | 66.6 |
| MS.gene49880.t1 | MTR_1g054300 | 25.373 | 268 | 148 | 11 | 85 | 316 | 167 | 418 | 3.30e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49880.t1 | AT3G49180 | 51.364 | 440 | 199 | 8 | 1 | 434 | 1 | 431 | 7.00e-157 | 451 |
| MS.gene49880.t1 | AT2G47410 | 29.565 | 230 | 134 | 9 | 108 | 326 | 41 | 253 | 8.87e-15 | 77.4 |
| MS.gene49880.t1 | AT2G47410 | 29.565 | 230 | 134 | 9 | 108 | 326 | 223 | 435 | 1.17e-14 | 77.0 |
| MS.gene49880.t1 | AT2G47410 | 29.565 | 230 | 134 | 9 | 108 | 326 | 222 | 434 | 1.19e-14 | 77.0 |
| MS.gene49880.t1 | AT2G47410 | 27.917 | 240 | 135 | 8 | 108 | 326 | 41 | 263 | 1.25e-14 | 77.0 |
| MS.gene49880.t1 | AT2G47410 | 27.917 | 240 | 135 | 8 | 108 | 326 | 41 | 263 | 1.25e-14 | 77.0 |
| MS.gene49880.t1 | AT2G47410 | 27.917 | 240 | 135 | 8 | 108 | 326 | 223 | 445 | 1.70e-14 | 76.6 |
| MS.gene49880.t1 | AT3G50390 | 29.596 | 223 | 112 | 9 | 120 | 326 | 210 | 403 | 3.46e-12 | 68.6 |
| MS.gene49880.t1 | AT5G25150 | 24.400 | 250 | 166 | 5 | 81 | 329 | 420 | 647 | 2.54e-11 | 66.2 |
| MS.gene49880.t1 | AT5G25150 | 24.400 | 250 | 166 | 5 | 81 | 329 | 420 | 647 | 2.57e-11 | 66.2 |
| MS.gene49880.t1 | AT1G15440 | 24.535 | 269 | 172 | 8 | 72 | 335 | 299 | 541 | 4.61e-11 | 65.5 |
| MS.gene49880.t1 | AT4G15900 | 21.127 | 213 | 144 | 6 | 85 | 296 | 224 | 413 | 5.76e-11 | 64.7 |
| MS.gene49880.t1 | AT1G15440 | 24.535 | 269 | 172 | 8 | 72 | 335 | 339 | 581 | 5.98e-11 | 65.1 |
Find 84 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGGTGGGATTGGATGC+TGG | 0.244369 | 7.4:-83216288 | MS.gene49880:CDS |
| GACGACTCGCTTCTGATATC+TGG | 0.250870 | 7.4:-83215381 | MS.gene49880:CDS |
| TGCTGGTGGGATTGGATGCT+GGG | 0.296640 | 7.4:-83216287 | MS.gene49880:CDS |
| AGAACAAGAATGTTGGTTAT+TGG | 0.297183 | 7.4:+83212396 | None:intergenic |
| TAACCATCTGCACCGACTTT+TGG | 0.309736 | 7.4:+83211793 | None:intergenic |
| TCTGATGCTGCTGGTGGGAT+TGG | 0.339838 | 7.4:-83216295 | MS.gene49880:CDS |
| AATGATGTTGTGATTGGTTA+TGG | 0.343075 | 7.4:-83215134 | MS.gene49880:CDS |
| GCGAAGGATGGTGGTTGTTT+TGG | 0.343910 | 7.4:-83216326 | None:intergenic |
| TAGTTACAGTAAAGAACTTC+AGG | 0.349150 | 7.4:-83212178 | MS.gene49880:intron |
| ATGATGGAATAGTTCGAGTT+TGG | 0.359268 | 7.4:-83213112 | MS.gene49880:CDS |
| AAAATGGAAGCGTGCGAGTC+TGG | 0.394218 | 7.4:-83215353 | MS.gene49880:CDS |
| AAGGTATGGACCTTATCTAA+TGG | 0.396842 | 7.4:-83214123 | MS.gene49880:CDS |
| TCTAGTTGGTGGAGGTTTGT+CGG | 0.404057 | 7.4:-83215925 | MS.gene49880:CDS |
| TTCTGCTGCTGCTTCTGAAA+TGG | 0.408358 | 7.4:-83211841 | MS.gene49880:CDS |
| GCTTCATCTTCTGATGCTGC+TGG | 0.415214 | 7.4:-83216304 | MS.gene49880:CDS |
| ATTACATGTTAGGTTGAAAC+CGG | 0.418189 | 7.4:-83215465 | MS.gene49880:intron |
| TTAGCAGCAAGAGGCGTAAT+AGG | 0.423260 | 7.4:+83215963 | None:intergenic |
| CTAGTTGGTGGAGGTTTGTC+GGG | 0.424140 | 7.4:-83215924 | MS.gene49880:CDS |
| TTAATATCTGGATCTGATGA+TGG | 0.432196 | 7.4:-83213128 | MS.gene49880:CDS |
| GGGAGCTCAATTTCCTCCTC+TGG | 0.433253 | 7.4:-83212310 | MS.gene49880:CDS |
| TGTGTAAATGATGTTGTGAT+TGG | 0.433668 | 7.4:-83215140 | MS.gene49880:CDS |
| CAAACCTCCACCAACTAGAT+AGG | 0.434226 | 7.4:+83215929 | None:intergenic |
| CTCTATGCTGGCAGTGAAGA+TGG | 0.444346 | 7.4:-83214030 | MS.gene49880:CDS |
| TTTCTTCTGGTCCTGGTCCA+AGG | 0.447303 | 7.4:-83216134 | MS.gene49880:intron |
| GCTGAACATGTTCTCTATGC+TGG | 0.452358 | 7.4:-83214042 | MS.gene49880:CDS |
| CGAGACGCAGCAACTTCCTC+TGG | 0.457499 | 7.4:-83216163 | MS.gene49880:CDS |
| CGGTGCAGATGGTTAACAAA+TGG | 0.457919 | 7.4:-83211785 | MS.gene49880:CDS |
| GGATGCTGGGACCTTCATAC+AGG | 0.460477 | 7.4:-83216274 | MS.gene49880:CDS |
| CCCATGTCTTCTAATTTACA+AGG | 0.473030 | 7.4:-83212348 | MS.gene49880:CDS |
| TTGTAGCATTCCATTAGATA+AGG | 0.474133 | 7.4:+83214113 | None:intergenic |
| TCTCATGGACTTGTCTCTGT+TGG | 0.475646 | 7.4:-83216214 | MS.gene49880:CDS |
| AGATGAAGACTCGGATAAAA+CGG | 0.479408 | 7.4:-83212268 | MS.gene49880:CDS |
| CCACTTCTTAAGCAATCTCC+CGG | 0.484159 | 7.4:+83215446 | None:intergenic |
| TGTGTAAAGGAGATGCTAGA+TGG | 0.498321 | 7.4:-83211732 | MS.gene49880:CDS |
| ATCAGATGATCGGACGTGTA+AGG | 0.503466 | 7.4:-83215084 | MS.gene49880:intron |
| TCATCTTCTGATGCTGCTGG+TGG | 0.503684 | 7.4:-83216301 | MS.gene49880:CDS |
| AGAGGCGTAATAGGTTCAGC+AGG | 0.504311 | 7.4:+83215972 | None:intergenic |
| CATCTTCTGATGCTGCTGGT+GGG | 0.505639 | 7.4:-83216300 | MS.gene49880:CDS |
| CGTGTCTTTAAACATGCTAA+AGG | 0.505720 | 7.4:-83213065 | MS.gene49880:intron |
| GGCACCTATCTAGTTGGTGG+AGG | 0.512048 | 7.4:-83215933 | MS.gene49880:CDS |
| AGTCGTCTTCAGAAAATACT+AGG | 0.514742 | 7.4:+83215397 | None:intergenic |
| ACGGCCATTGTCAGTCTTGG+TGG | 0.515813 | 7.4:-83212249 | MS.gene49880:CDS |
| GCATAGAGAACATGTTCAGC+AGG | 0.517203 | 7.4:+83214045 | None:intergenic |
| GATCAAGTTTCATATATCAC+TGG | 0.521879 | 7.4:-83213961 | MS.gene49880:CDS |
| TAGAAATCACTTGAGAACTA+AGG | 0.524010 | 7.4:+83212199 | None:intergenic |
| CTTTAGCATGTTTAAAGACA+CGG | 0.528525 | 7.4:+83213066 | None:intergenic |
| AAAACGGCCATTGTCAGTCT+TGG | 0.531849 | 7.4:-83212252 | MS.gene49880:CDS |
| CACAGTGGCACCTATCTAGT+TGG | 0.535889 | 7.4:-83215939 | MS.gene49880:CDS |
| TCCTTGTAAATTAGAAGACA+TGG | 0.536145 | 7.4:+83212347 | None:intergenic |
| GAAGTGGCATGGTCATAATA+CGG | 0.538433 | 7.4:-83215430 | MS.gene49880:CDS |
| GGACCAGGACCAGAAGAAAA+CGG | 0.547729 | 7.4:+83216138 | None:intergenic |
| TAACCTATGTATCAGAGTCA+AGG | 0.550821 | 7.4:-83211864 | MS.gene49880:intron |
| ACGGATGATGTTATGAGTGC+TGG | 0.558411 | 7.4:+83213085 | None:intergenic |
| TAGCTTCAGCATCAGATGAT+CGG | 0.564804 | 7.4:-83215094 | MS.gene49880:CDS |
| AGTGGCACCTATCTAGTTGG+TGG | 0.564827 | 7.4:-83215936 | MS.gene49880:CDS |
| CCAGAAGAAAACGGAACCAG+AGG | 0.566880 | 7.4:+83216147 | None:intergenic |
| TTGCCAAAAGTCGGTGCAGA+TGG | 0.571216 | 7.4:-83211796 | MS.gene49880:CDS |
| TTGTCTAAGAACAAGAATGT+TGG | 0.573571 | 7.4:+83212389 | None:intergenic |
| TAAACAAAAGACCTTGGACC+AGG | 0.575890 | 7.4:+83216123 | None:intergenic |
| ATCATTAGTAGTGATTCTTG+TGG | 0.576774 | 7.4:+83213981 | None:intergenic |
| TCTGCTCAGAACCTGTATGA+AGG | 0.579541 | 7.4:+83216263 | None:intergenic |
| ATTTGACGATGTGAGAAGAC+GGG | 0.592153 | 7.4:-83215207 | MS.gene49880:CDS |
| CCTTGTAAATTAGAAGACAT+GGG | 0.594125 | 7.4:+83212348 | None:intergenic |
| ACAGAGACAAGTCCATGAGA+AGG | 0.598718 | 7.4:+83216217 | None:intergenic |
| CACAACATCATTTACACACA+AGG | 0.601098 | 7.4:+83215145 | None:intergenic |
| TATTTGACGATGTGAGAAGA+CGG | 0.605152 | 7.4:-83215208 | MS.gene49880:CDS |
| CCGGGAGATTGCTTAAGAAG+TGG | 0.610312 | 7.4:-83215446 | MS.gene49880:CDS |
| TTCAGCAGGATCCAATGCAA+TGG | 0.616382 | 7.4:+83214059 | None:intergenic |
| GAGAAGAAAATGATTTGTAG+CGG | 0.616824 | 7.4:+83216239 | None:intergenic |
| CTCGAAGCTGAGAAGATGCA+AGG | 0.616897 | 7.4:+83216182 | None:intergenic |
| GCTACCACCAAGACTGACAA+TGG | 0.618807 | 7.4:+83212245 | None:intergenic |
| TGTCGGGTGAAATATACTTG+TGG | 0.619202 | 7.4:-83215908 | MS.gene49880:CDS |
| CCACTGTGATTAGCAGCAAG+AGG | 0.623842 | 7.4:+83215954 | None:intergenic |
| TGGTGGTAGCAATATATGCA+TGG | 0.630913 | 7.4:-83212232 | MS.gene49880:CDS |
| AAAACGTGATTGCCAAAAGT+CGG | 0.635151 | 7.4:-83211805 | MS.gene49880:CDS |
| AAGCTCTTAACTTCAACTTG+AGG | 0.638403 | 7.4:+83215996 | None:intergenic |
| AGATTGCTTAAGAAGTGGCA+TGG | 0.640873 | 7.4:-83215441 | MS.gene49880:CDS |
| GATGTTGTGATTGGTTATGG+AGG | 0.650928 | 7.4:-83215131 | MS.gene49880:CDS |
| CATCATTTACACACAAGGCG+TGG | 0.660037 | 7.4:+83215150 | None:intergenic |
| AAATTCAATAGATGAAGACT+CGG | 0.668957 | 7.4:-83212277 | MS.gene49880:CDS |
| TTACATGTTAGGTTGAAACC+GGG | 0.673175 | 7.4:-83215464 | MS.gene49880:intron |
| TGACGATGTGAGAAGACGGG+AGG | 0.682456 | 7.4:-83215204 | MS.gene49880:CDS |
| GGGTGAAATATACTTGTGGA+AGG | 0.684136 | 7.4:-83215904 | MS.gene49880:intron |
| CCTCTTGCTGCTAATCACAG+TGG | 0.745823 | 7.4:-83215954 | MS.gene49880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAACTCATTATTTAA+AGG | - | chr7.4:83216110-83216129 | MS.gene49880:intron | 10.0% |
| !! | CATAGTAAAAAATTAAATTA+TGG | + | chr7.4:83214394-83214413 | None:intergenic | 10.0% |
| !!! | TTGAAAATTTTAATCATTTA+TGG | - | chr7.4:83213090-83213109 | MS.gene49880:CDS | 10.0% |
| !! | AAAAAAGATGCAAAATAATT+AGG | + | chr7.4:83213546-83213565 | None:intergenic | 15.0% |
| !! | AAAAAGATGCAAAATAATTA+GGG | + | chr7.4:83213545-83213564 | None:intergenic | 15.0% |
| !! | CAAATTTAGAGAAAATAAAA+AGG | + | chr7.4:83214182-83214201 | None:intergenic | 15.0% |
| !! | CCAATTTAATAATTTGAAAA+GGG | - | chr7.4:83213763-83213782 | MS.gene49880:intron | 15.0% |
| !! | TCCAATTTAATAATTTGAAA+AGG | - | chr7.4:83213762-83213781 | MS.gene49880:intron | 15.0% |
| !!! | AAATGTCTTTTCTTTTTTTA+AGG | - | chr7.4:83213896-83213915 | MS.gene49880:intron | 15.0% |
| !!! | CTTTTTATTTTCTCTAAATT+TGG | - | chr7.4:83214180-83214199 | MS.gene49880:intron | 15.0% |
| !!! | TTTTTTTTTTGTAATTGACA+AGG | + | chr7.4:83214781-83214800 | None:intergenic | 15.0% |
| !! | AAAAAGAAACAGCAAAATAA+AGG | + | chr7.4:83212530-83212549 | None:intergenic | 20.0% |
| !! | AAAAGAAACAGCAAAATAAA+GGG | + | chr7.4:83212529-83212548 | None:intergenic | 20.0% |
| !! | AAAAGATGCAAAATAATTAG+GGG | + | chr7.4:83213544-83213563 | None:intergenic | 20.0% |
| !! | AGTATTTATTGCTTACTTAT+TGG | + | chr7.4:83213613-83213632 | None:intergenic | 20.0% |
| !! | ATATATTACAGAATAATTGG+TGG | + | chr7.4:83213368-83213387 | None:intergenic | 20.0% |
| !! | ATTAAATTGTTTATCCAAAC+AGG | + | chr7.4:83214441-83214460 | None:intergenic | 20.0% |
| !! | ATTTATACTTGGTTTCTTTA+TGG | - | chr7.4:83211937-83211956 | MS.gene49880:intron | 20.0% |
| !! | GAAATGTAAAAATTAAATCC+TGG | - | chr7.4:83212233-83212252 | MS.gene49880:CDS | 20.0% |
| !! | GGAATATATTACAGAATAAT+TGG | + | chr7.4:83213371-83213390 | None:intergenic | 20.0% |
| !! | GTAGAAAAATAGATAAACAA+TGG | - | chr7.4:83213010-83213029 | MS.gene49880:intron | 20.0% |
| !! | TAAACTCATTATTTAAAGGA+TGG | - | chr7.4:83216114-83216133 | MS.gene49880:intron | 20.0% |
| !! | TAATTAGTACAGTTATAAAC+TGG | + | chr7.4:83213506-83213525 | None:intergenic | 20.0% |
| !! | TATAAATAAACAAAAGACCT+TGG | + | chr7.4:83211924-83211943 | None:intergenic | 20.0% |
| !! | TCCAGATATTAAAAAATTCT+CGG | + | chr7.4:83214902-83214921 | None:intergenic | 20.0% |
| !! | TTAAATTGTTTATCCAAACA+GGG | + | chr7.4:83214440-83214459 | None:intergenic | 20.0% |
| !! | TTCAAAGATAATTAATCACA+GGG | + | chr7.4:83213327-83213346 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGAAACAATGATT+TGG | - | chr7.4:83212417-83212436 | MS.gene49880:intron | 20.0% |
| !!! | CCCTTTTCAAATTATTAAAT+TGG | + | chr7.4:83213766-83213785 | None:intergenic | 20.0% |
| !!! | GCATATATTTAAGGAAATTT+TGG | - | chr7.4:83213212-83213231 | MS.gene49880:intron | 20.0% |
| !!! | GGTTTATTTATTTTTCCAAA+AGG | - | chr7.4:83213846-83213865 | MS.gene49880:intron | 20.0% |
| !!! | GTCTTTTGTTTATTTATACT+TGG | - | chr7.4:83211926-83211945 | MS.gene49880:intron | 20.0% |
| !!! | TAACTACACTATCAAATTTT+TGG | + | chr7.4:83214217-83214236 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTTTTAAGGTA+TGG | - | chr7.4:83213901-83213920 | MS.gene49880:intron | 20.0% |
| !!! | TTCATTTTAAATTGCTAGTT+AGG | - | chr7.4:83212327-83212346 | MS.gene49880:CDS | 20.0% |
| !!! | TTTGTTTTACTGTTTTTATG+TGG | - | chr7.4:83212977-83212996 | MS.gene49880:intron | 20.0% |
| ! | AAAAATTAAAGCCATTGCAT+TGG | - | chr7.4:83213968-83213987 | MS.gene49880:CDS | 25.0% |
| ! | AAATTAAATCAGGAGATAGT+TGG | + | chr7.4:83214723-83214742 | None:intergenic | 25.0% |
| ! | AAATTCAATAGATGAAGACT+CGG | - | chr7.4:83215761-83215780 | MS.gene49880:intron | 25.0% |
| ! | AGAGAAAATAAAAAGGATCA+TGG | + | chr7.4:83214175-83214194 | None:intergenic | 25.0% |
| ! | AGAGTATATTGAAAAGAATG+AGG | + | chr7.4:83215456-83215475 | None:intergenic | 25.0% |
| ! | AGAGTTCTTAAAAAAAACTG+AGG | + | chr7.4:83215308-83215327 | None:intergenic | 25.0% |
| ! | AGATATTAAAAAATTCTCGG+CGG | + | chr7.4:83214899-83214918 | None:intergenic | 25.0% |
| ! | ATAAGCTAATTCTATAGCAA+AGG | - | chr7.4:83214484-83214503 | MS.gene49880:intron | 25.0% |
| ! | ATCAAAACTTTCATAATGCT+GGG | - | chr7.4:83213119-83213138 | MS.gene49880:CDS | 25.0% |
| ! | ATGAATTCTACCAAACATTT+AGG | - | chr7.4:83214414-83214433 | MS.gene49880:intron | 25.0% |
| ! | GATATATTGTCAGTGTAAAA+AGG | + | chr7.4:83216089-83216108 | None:intergenic | 25.0% |
| ! | GGAAAGATATTCTACAAAAA+GGG | + | chr7.4:83213485-83213504 | None:intergenic | 25.0% |
| ! | GTATACGTGTGTAAAAAAAA+GGG | + | chr7.4:83215434-83215453 | None:intergenic | 25.0% |
| ! | GTTACAACCAAAATTAAATC+AGG | + | chr7.4:83214733-83214752 | None:intergenic | 25.0% |
| ! | GTTCAAAGATAATTAATCAC+AGG | + | chr7.4:83213328-83213347 | None:intergenic | 25.0% |
| ! | TAAGCAATAAATACTATGCA+GGG | - | chr7.4:83213618-83213637 | MS.gene49880:intron | 25.0% |
| ! | TACCTGATCAAAACAAATAT+AGG | - | chr7.4:83215263-83215282 | MS.gene49880:intron | 25.0% |
| ! | TATCAAAACTTTCATAATGC+TGG | - | chr7.4:83213118-83213137 | MS.gene49880:CDS | 25.0% |
| ! | TCGTAAATGATAAATGATGA+CGG | - | chr7.4:83211984-83212003 | MS.gene49880:intron | 25.0% |
| ! | TGGAAAGATATTCTACAAAA+AGG | + | chr7.4:83213486-83213505 | None:intergenic | 25.0% |
| ! | TTATCATTTACGAAAATTGC+CGG | + | chr7.4:83211977-83211996 | None:intergenic | 25.0% |
| !! | CAATTTTATTAGAGAGAAGA+TGG | - | chr7.4:83212373-83212392 | MS.gene49880:CDS | 25.0% |
| !! | GTAATATATTCCGTCTTTTT+AGG | - | chr7.4:83213379-83213398 | MS.gene49880:intron | 25.0% |
| !! | GTATAAGAGGCATATATTTA+AGG | - | chr7.4:83213203-83213222 | MS.gene49880:intron | 25.0% |
| !!! | ACTATCTCCTGATTTAATTT+TGG | - | chr7.4:83214723-83214742 | MS.gene49880:intron | 25.0% |
| !!! | ATTGTTGTTTTCTAATTCAC+AGG | - | chr7.4:83213825-83213844 | MS.gene49880:intron | 25.0% |
| !!! | CAAAATAATTAGGGGTATTT+TGG | + | chr7.4:83213536-83213555 | None:intergenic | 25.0% |
| !!! | CAATGGCTTTAATTTTTGAA+GGG | + | chr7.4:83213965-83213984 | None:intergenic | 25.0% |
| !!! | CTGATATCTGGTTTTAAAAA+TGG | - | chr7.4:83212669-83212688 | MS.gene49880:intron | 25.0% |
| !!! | GATTGTTGGTTGATTTTTTA+TGG | - | chr7.4:83212211-83212230 | MS.gene49880:CDS | 25.0% |
| !!! | GCTAGTTGATAAATTCAAAT+AGG | - | chr7.4:83214634-83214653 | MS.gene49880:intron | 25.0% |
| !!! | GTTTTGTTGTTTGGAATTTA+TGG | - | chr7.4:83214342-83214361 | MS.gene49880:intron | 25.0% |
| !!! | TCAAAAAAGCATTATGTTCA+TGG | + | chr7.4:83213238-83213257 | None:intergenic | 25.0% |
| AAATAAAGCTGAAAACAGCA+TGG | - | chr7.4:83214555-83214574 | MS.gene49880:intron | 30.0% | |
| AGCTTAGCTAATTTACTGTT+TGG | - | chr7.4:83213278-83213297 | MS.gene49880:intron | 30.0% | |
| ATCATTAGTAGTGATTCTTG+TGG | + | chr7.4:83214060-83214079 | None:intergenic | 30.0% | |
| ATTAAATCCTGGATTGTAAC+TGG | - | chr7.4:83212244-83212263 | MS.gene49880:CDS | 30.0% | |
| ATTGTAACTTCTTGTTCCTA+CGG | - | chr7.4:83214296-83214315 | MS.gene49880:intron | 30.0% | |
| CAAGAATCAACCTAAAAAGA+CGG | + | chr7.4:83213392-83213411 | None:intergenic | 30.0% | |
| CCTTGTAAATTAGAAGACAT+GGG | + | chr7.4:83215693-83215712 | None:intergenic | 30.0% | |
| CTTTAGCATGTTTAAAGACA+CGG | + | chr7.4:83214975-83214994 | None:intergenic | 30.0% | |
| GATCAAGTTTCATATATCAC+TGG | - | chr7.4:83214077-83214096 | MS.gene49880:CDS | 30.0% | |
| GCTTAGCTAATTTACTGTTT+GGG | - | chr7.4:83213279-83213298 | MS.gene49880:intron | 30.0% | |
| GGTATACGTGTGTAAAAAAA+AGG | + | chr7.4:83215435-83215454 | None:intergenic | 30.0% | |
| GTAAGCAATAAATACTATGC+AGG | - | chr7.4:83213617-83213636 | MS.gene49880:intron | 30.0% | |
| GTCAGATCATTAAAAACGTT+TGG | - | chr7.4:83216001-83216020 | MS.gene49880:intron | 30.0% | |
| TAAACAAGCTCCTACATTTA+GGG | - | chr7.4:83213694-83213713 | MS.gene49880:intron | 30.0% | |
| TAGAAATCACTTGAGAACTA+AGG | + | chr7.4:83215842-83215861 | None:intergenic | 30.0% | |
| TAGTTACAGTAAAGAACTTC+AGG | - | chr7.4:83215860-83215879 | MS.gene49880:intron | 30.0% | |
| TCAAAACTTTCATAATGCTG+GGG | - | chr7.4:83213120-83213139 | MS.gene49880:CDS | 30.0% | |
| TCATATCTCATATCACTTTC+AGG | - | chr7.4:83215530-83215549 | MS.gene49880:intron | 30.0% | |
| TCCTTGTAAATTAGAAGACA+TGG | + | chr7.4:83215694-83215713 | None:intergenic | 30.0% | |
| TGAAAGGAAAAAACAATAGG+AGG | + | chr7.4:83212757-83212776 | None:intergenic | 30.0% | |
| TGTAGACACTTCTTGAAATA+TGG | - | chr7.4:83214999-83215018 | MS.gene49880:intron | 30.0% | |
| TGTGTAAATGATGTTGTGAT+TGG | - | chr7.4:83212898-83212917 | MS.gene49880:intron | 30.0% | |
| TTAAATCCTGGATTGTAACT+GGG | - | chr7.4:83212245-83212264 | MS.gene49880:CDS | 30.0% | |
| TTAAATTGCTAGTTAGGAGA+TGG | - | chr7.4:83212333-83212352 | MS.gene49880:CDS | 30.0% | |
| TTAATATCTGGATCTGATGA+TGG | - | chr7.4:83214910-83214929 | MS.gene49880:intron | 30.0% | |
| TTGTAGCATTCCATTAGATA+AGG | + | chr7.4:83213928-83213947 | None:intergenic | 30.0% | |
| TTGTCTAAGAACAAGAATGT+TGG | + | chr7.4:83215652-83215671 | None:intergenic | 30.0% | |
| ! | AATGATGTTGTGATTGGTTA+TGG | - | chr7.4:83212904-83212923 | MS.gene49880:intron | 30.0% |
| ! | AGAACAAGAATGTTGGTTAT+TGG | + | chr7.4:83215645-83215664 | None:intergenic | 30.0% |
| ! | CTTGCATCAATTTTGTGTAA+AGG | - | chr7.4:83216293-83216312 | MS.gene49880:CDS | 30.0% |
| ! | GAGAAGAAAATGATTTGTAG+CGG | + | chr7.4:83211802-83211821 | None:intergenic | 30.0% |
| ! | GTGCTTTATTCAAGTATAAG+AGG | - | chr7.4:83213190-83213209 | MS.gene49880:intron | 30.0% |
| ! | GTGTATTTTGTCCCTAATAT+AGG | - | chr7.4:83213436-83213455 | MS.gene49880:intron | 30.0% |
| ! | TATGCATCAAGAGTTTGTTT+CGG | - | chr7.4:83212182-83212201 | MS.gene49880:CDS | 30.0% |
| ! | TTCTCACTCAAGTTCTAATT+TGG | + | chr7.4:83215169-83215188 | None:intergenic | 30.0% |
| !! | ATTACATGTTAGGTTGAAAC+CGG | - | chr7.4:83212573-83212592 | MS.gene49880:intron | 30.0% |
| !! | GATGTTTTTACTTGTGTGTT+GGG | - | chr7.4:83212012-83212031 | MS.gene49880:intron | 30.0% |
| !! | TAGCTTTATGCCACAAAATT+GGG | + | chr7.4:83213790-83213809 | None:intergenic | 30.0% |
| !! | TATGGATTAGTATTTGTGTC+CGG | - | chr7.4:83211955-83211974 | MS.gene49880:intron | 30.0% |
| !! | TGATGTTTTTACTTGTGTGT+TGG | - | chr7.4:83212011-83212030 | MS.gene49880:intron | 30.0% |
| !!! | AAGCATTCAGTTTTGTTGTT+TGG | - | chr7.4:83214333-83214352 | MS.gene49880:intron | 30.0% |
| !!! | CACCTATATTTGTTTTGATC+AGG | + | chr7.4:83215268-83215287 | None:intergenic | 30.0% |
| !!! | CTATTGTTTTTTCCTTTCAC+CGG | - | chr7.4:83212758-83212777 | MS.gene49880:intron | 30.0% |
| !!! | GCAATGGCTTTAATTTTTGA+AGG | + | chr7.4:83213966-83213985 | None:intergenic | 30.0% |
| !!! | GCCGAGAATTTTTTAATATC+TGG | - | chr7.4:83214898-83214917 | MS.gene49880:intron | 30.0% |
| !!! | TGTTTCGGAATTTTGATTGT+TGG | - | chr7.4:83212197-83212216 | MS.gene49880:CDS | 30.0% |
| AAAACGTGATTGCCAAAAGT+CGG | - | chr7.4:83216233-83216252 | MS.gene49880:CDS | 35.0% | |
| AAAACTTTCATAATGCTGGG+GGG | - | chr7.4:83213122-83213141 | MS.gene49880:CDS | 35.0% | |
| AACAATAGGAGGTGAACAAA+TGG | + | chr7.4:83212746-83212765 | None:intergenic | 35.0% | |
| AAGCTCTTAACTTCAACTTG+AGG | + | chr7.4:83212045-83212064 | None:intergenic | 35.0% | |
| AAGGTATGGACCTTATCTAA+TGG | - | chr7.4:83213915-83213934 | MS.gene49880:intron | 35.0% | |
| AATATGGCCTACTTATGGTT+TGG | - | chr7.4:83215015-83215034 | MS.gene49880:intron | 35.0% | |
| ACTTTCTCATTCTTACAGCA+AGG | - | chr7.4:83214849-83214868 | MS.gene49880:intron | 35.0% | |
| AGATGAAGACTCGGATAAAA+CGG | - | chr7.4:83215770-83215789 | MS.gene49880:intron | 35.0% | |
| AGTCGTCTTCAGAAAATACT+AGG | + | chr7.4:83212644-83212663 | None:intergenic | 35.0% | |
| ATATGGCCTACTTATGGTTT+GGG | - | chr7.4:83215016-83215035 | MS.gene49880:intron | 35.0% | |
| ATCACGGGAATTAAGAAAGT+TGG | + | chr7.4:83213670-83213689 | None:intergenic | 35.0% | |
| ATGACAACAGTTCAATACAG+TGG | + | chr7.4:83214144-83214163 | None:intergenic | 35.0% | |
| ATGGACGAATTTGATGAGTA+TGG | - | chr7.4:83214361-83214380 | MS.gene49880:intron | 35.0% | |
| CAAAACTTTCATAATGCTGG+GGG | - | chr7.4:83213121-83213140 | MS.gene49880:CDS | 35.0% | |
| CACAACATCATTTACACACA+AGG | + | chr7.4:83212896-83212915 | None:intergenic | 35.0% | |
| CCCATGTCTTCTAATTTACA+AGG | - | chr7.4:83215690-83215709 | MS.gene49880:intron | 35.0% | |
| CGGTGAAAGGAAAAAACAAT+AGG | + | chr7.4:83212760-83212779 | None:intergenic | 35.0% | |
| CGTGTCTTTAAACATGCTAA+AGG | - | chr7.4:83214973-83214992 | MS.gene49880:intron | 35.0% | |
| CTTGAAATATGGCCTACTTA+TGG | - | chr7.4:83215010-83215029 | MS.gene49880:intron | 35.0% | |
| GATACAACATCACAGACTAA+GGG | + | chr7.4:83214674-83214693 | None:intergenic | 35.0% | |
| GATATGAGATATGAGCATGT+GGG | + | chr7.4:83215524-83215543 | None:intergenic | 35.0% | |
| GGTTTCAACCTAACATGTAA+TGG | + | chr7.4:83212574-83212593 | None:intergenic | 35.0% | |
| GTAAACAAGCTCCTACATTT+AGG | - | chr7.4:83213693-83213712 | MS.gene49880:intron | 35.0% | |
| TAAAAAGGATCATGGAAGAG+AGG | + | chr7.4:83214167-83214186 | None:intergenic | 35.0% | |
| TAACCTATGTATCAGAGTCA+AGG | - | chr7.4:83216174-83216193 | MS.gene49880:CDS | 35.0% | |
| TAACTACCATGTATGTTCCA+AGG | + | chr7.4:83214267-83214286 | None:intergenic | 35.0% | |
| TAATGACTAAGAATCAGCTC+TGG | + | chr7.4:83214696-83214715 | None:intergenic | 35.0% | |
| TAGCTAATTTACTGTTTGGG+TGG | - | chr7.4:83213282-83213301 | MS.gene49880:intron | 35.0% | |
| TATTTGACGATGTGAGAAGA+CGG | - | chr7.4:83212830-83212849 | MS.gene49880:intron | 35.0% | |
| TCAATACAGTGGACAATAAG+AGG | + | chr7.4:83214133-83214152 | None:intergenic | 35.0% | |
| TCTAATTATCTCAGTGCAGT+TGG | - | chr7.4:83215325-83215344 | MS.gene49880:intron | 35.0% | |
| TGATATGAGATATGAGCATG+TGG | + | chr7.4:83215525-83215544 | None:intergenic | 35.0% | |
| TGGACGAATTTGATGAGTAT+GGG | - | chr7.4:83214362-83214381 | MS.gene49880:intron | 35.0% | |
| TTCAACCTAACATGTAATGG+AGG | + | chr7.4:83212571-83212590 | None:intergenic | 35.0% | |
| TTGTAACTTCTTGTTCCTAC+GGG | - | chr7.4:83214297-83214316 | MS.gene49880:intron | 35.0% | |
| ! | AAGATCTGTGAATTGCCTTT+TGG | + | chr7.4:83213864-83213883 | None:intergenic | 35.0% |
| ! | ATGATGGAATAGTTCGAGTT+TGG | - | chr7.4:83214926-83214945 | MS.gene49880:intron | 35.0% |
| ! | CAAGGTAGTGTTTTCTACAA+TGG | + | chr7.4:83212793-83212812 | None:intergenic | 35.0% |
| ! | CAATTTTGTGGCATAAAGCT+AGG | - | chr7.4:83213789-83213808 | MS.gene49880:intron | 35.0% |
| ! | GAATTTGCGTATTTTTCCAG+AGG | + | chr7.4:83215747-83215766 | None:intergenic | 35.0% |
| ! | GAGCTTGTTTACTAAATCAC+GGG | + | chr7.4:83213685-83213704 | None:intergenic | 35.0% |
| ! | GGAGCTTGTTTACTAAATCA+CGG | + | chr7.4:83213686-83213705 | None:intergenic | 35.0% |
| ! | GTTTGTCTCTATTGATGATC+AGG | - | chr7.4:83215882-83215901 | MS.gene49880:intron | 35.0% |
| ! | TCATTTTCTTCTCCTTCTCA+TGG | - | chr7.4:83211809-83211828 | MS.gene49880:CDS | 35.0% |
| ! | TTCTTGGGTGATAATGTCAA+AGG | - | chr7.4:83213161-83213180 | MS.gene49880:CDS | 35.0% |
| !! | CTAGCTTTATGCCACAAAAT+TGG | + | chr7.4:83213791-83213810 | None:intergenic | 35.0% |
| !! | CTTCTAAAGTCACACATGAT+TGG | - | chr7.4:83216039-83216058 | MS.gene49880:intron | 35.0% |
| !! | TTACATGTTAGGTTGAAACC+GGG | - | chr7.4:83212574-83212593 | MS.gene49880:intron | 35.0% |
| AAACCAGCTGTTCTTGTTCT+TGG | - | chr7.4:83213145-83213164 | MS.gene49880:CDS | 40.0% | |
| AACCAGCTGTTCTTGTTCTT+GGG | - | chr7.4:83213146-83213165 | MS.gene49880:CDS | 40.0% | |
| AGAGATGTTAACTCGCAAAC+AGG | + | chr7.4:83216152-83216171 | None:intergenic | 40.0% | |
| AGAGGTGAAAAGATAACCTG+TGG | + | chr7.4:83214115-83214134 | None:intergenic | 40.0% | |
| AGATTGCTTAAGAAGTGGCA+TGG | - | chr7.4:83212597-83212616 | MS.gene49880:intron | 40.0% | |
| AGCAATCCCAAACCATAAGT+AGG | + | chr7.4:83215025-83215044 | None:intergenic | 40.0% | |
| AGTTGCCTCCATTACATGTT+AGG | - | chr7.4:83212563-83212582 | MS.gene49880:intron | 40.0% | |
| ATACAAGCGGGTCCTATATT+AGG | + | chr7.4:83213451-83213470 | None:intergenic | 40.0% | |
| ATTTGACGATGTGAGAAGAC+GGG | - | chr7.4:83212831-83212850 | MS.gene49880:intron | 40.0% | |
| GAACCTTGACTCTGATACAT+AGG | + | chr7.4:83216180-83216199 | None:intergenic | 40.0% | |
| GAAGTGGCATGGTCATAATA+CGG | - | chr7.4:83212608-83212627 | MS.gene49880:intron | 40.0% | |
| GACCAGCAAAAAATACAAGC+GGG | + | chr7.4:83213463-83213482 | None:intergenic | 40.0% | |
| GGACCAGCAAAAAATACAAG+CGG | + | chr7.4:83213464-83213483 | None:intergenic | 40.0% | |
| GGACGAATTTGATGAGTATG+GGG | - | chr7.4:83214363-83214382 | MS.gene49880:intron | 40.0% | |
| GGATACAACATCACAGACTA+AGG | + | chr7.4:83214675-83214694 | None:intergenic | 40.0% | |
| GGGTGAAATATACTTGTGGA+AGG | - | chr7.4:83212134-83212153 | MS.gene49880:intron | 40.0% | |
| GGTGGAGTAAAAAGTAACTC+AGG | + | chr7.4:83213350-83213369 | None:intergenic | 40.0% | |
| TAAACAAAAGACCTTGGACC+AGG | + | chr7.4:83211918-83211937 | None:intergenic | 40.0% | |
| TAAGTTCCCAGTTACAATCC+AGG | + | chr7.4:83212254-83212273 | None:intergenic | 40.0% | |
| TACAAGCGGGTCCTATATTA+GGG | + | chr7.4:83213450-83213469 | None:intergenic | 40.0% | |
| TAGCTTCAGCATCAGATGAT+CGG | - | chr7.4:83212944-83212963 | MS.gene49880:intron | 40.0% | |
| TCAAATAGGCAAATCCGAAC+AGG | - | chr7.4:83214648-83214667 | MS.gene49880:intron | 40.0% | |
| TCCTGCAACATTCGAAAGAT+TGG | + | chr7.4:83215622-83215641 | None:intergenic | 40.0% | |
| TCTACAATGGTTAGCACTAC+CGG | + | chr7.4:83212780-83212799 | None:intergenic | 40.0% | |
| TGACAAGGAGAGAAGCAAAA+AGG | + | chr7.4:83214766-83214785 | None:intergenic | 40.0% | |
| TGGTGGTAGCAATATATGCA+TGG | - | chr7.4:83215806-83215825 | MS.gene49880:intron | 40.0% | |
| TGTCGGGTGAAATATACTTG+TGG | - | chr7.4:83212130-83212149 | MS.gene49880:intron | 40.0% | |
| TGTGTAAAGGAGATGCTAGA+TGG | - | chr7.4:83216306-83216325 | MS.gene49880:CDS | 40.0% | |
| TTATCTCCGTCCCTAAATGT+AGG | + | chr7.4:83213707-83213726 | None:intergenic | 40.0% | |
| ! | CAACTAGCTTAAGCACTTGT+GGG | + | chr7.4:83214622-83214641 | None:intergenic | 40.0% |
| ! | CTGGTTCATTTTCTAACCAC+AGG | - | chr7.4:83214096-83214115 | MS.gene49880:CDS | 40.0% |
| ! | GATGTTGTGATTGGTTATGG+AGG | - | chr7.4:83212907-83212926 | MS.gene49880:intron | 40.0% |
| ! | TCAACTAGCTTAAGCACTTG+TGG | + | chr7.4:83214623-83214642 | None:intergenic | 40.0% |
| ! | TGAAAAGGGACCCAATTTTG+TGG | - | chr7.4:83213777-83213796 | MS.gene49880:intron | 40.0% |
| ! | TTTGCGTATTTTTCCAGAGG+AGG | + | chr7.4:83215744-83215763 | None:intergenic | 40.0% |
| AAAACGGCCATTGTCAGTCT+TGG | - | chr7.4:83215786-83215805 | MS.gene49880:intron | 45.0% | |
| AAACACTACCTTGCACGTCA+TGG | - | chr7.4:83212800-83212819 | MS.gene49880:intron | 45.0% | |
| ACAGAGACAAGTCCATGAGA+AGG | + | chr7.4:83211824-83211843 | None:intergenic | 45.0% | |
| ACGGATGATGTTATGAGTGC+TGG | + | chr7.4:83214956-83214975 | None:intergenic | 45.0% | |
| ACTGTCTTATGCTCTCTCCT+TGG | - | chr7.4:83214247-83214266 | MS.gene49880:intron | 45.0% | |
| ATCAGATGATCGGACGTGTA+AGG | - | chr7.4:83212954-83212973 | MS.gene49880:intron | 45.0% | |
| CAAACCTCCACCAACTAGAT+AGG | + | chr7.4:83212112-83212131 | None:intergenic | 45.0% | |
| CAAGCTCCTACATTTAGGGA+CGG | - | chr7.4:83213698-83213717 | MS.gene49880:intron | 45.0% | |
| CATCATTTACACACAAGGCG+TGG | + | chr7.4:83212891-83212910 | None:intergenic | 45.0% | |
| CCAAACAGGGCCTAAATGTT+TGG | + | chr7.4:83214427-83214446 | None:intergenic | 45.0% | |
| CCAAACATTTAGGCCCTGTT+TGG | - | chr7.4:83214424-83214443 | MS.gene49880:intron | 45.0% | |
| CCACTTCTTAAGCAATCTCC+CGG | + | chr7.4:83212595-83212614 | None:intergenic | 45.0% | |
| CGGTGCAGATGGTTAACAAA+TGG | - | chr7.4:83216253-83216272 | MS.gene49880:CDS | 45.0% | |
| CTCTCTCCTTGGAACATACA+TGG | - | chr7.4:83214258-83214277 | MS.gene49880:intron | 45.0% | |
| GAGAAGATGGAAGACATGCT+TGG | - | chr7.4:83212386-83212405 | MS.gene49880:CDS | 45.0% | |
| GAGATATGAGCATGTGGGTT+CGG | + | chr7.4:83215519-83215538 | None:intergenic | 45.0% | |
| GCATAGAGAACATGTTCAGC+AGG | + | chr7.4:83213996-83214015 | None:intergenic | 45.0% | |
| GCCAATCTTTCGAATGTTGC+AGG | - | chr7.4:83215618-83215637 | MS.gene49880:intron | 45.0% | |
| GCTGAACATGTTCTCTATGC+TGG | - | chr7.4:83213996-83214015 | MS.gene49880:CDS | 45.0% | |
| TCTCATGGACTTGTCTCTGT+TGG | - | chr7.4:83211824-83211843 | MS.gene49880:CDS | 45.0% | |
| TCTGCTCAGAACCTGTATGA+AGG | + | chr7.4:83211778-83211797 | None:intergenic | 45.0% | |
| TTCAGCAGGATCCAATGCAA+TGG | + | chr7.4:83213982-83214001 | None:intergenic | 45.0% | |
| ! | GAGAGAGCATAAGACAGTCA+TGG | + | chr7.4:83214245-83214264 | None:intergenic | 45.0% |
| ! | TTAGCAGCAAGAGGCGTAAT+AGG | + | chr7.4:83212078-83212097 | None:intergenic | 45.0% |
| ! | TTCTGCTGCTGCTTCTGAAA+TGG | - | chr7.4:83216197-83216216 | MS.gene49880:CDS | 45.0% |
| !! | TCTAGTTGGTGGAGGTTTGT+CGG | - | chr7.4:83212113-83212132 | MS.gene49880:intron | 45.0% |
| !! | TGGGATTGCTTTTGCAGATC+TGG | - | chr7.4:83215035-83215054 | MS.gene49880:intron | 45.0% |
| !!! | CTTTTGCAGATCTGGCTTTC+TGG | - | chr7.4:83215043-83215062 | MS.gene49880:intron | 45.0% |
| !!! | GACCCGCTTGTATTTTTTGC+TGG | - | chr7.4:83213458-83213477 | MS.gene49880:intron | 45.0% |
| !!! | TAACCATCTGCACCGACTTT+TGG | + | chr7.4:83216248-83216267 | None:intergenic | 45.0% |
| AAGCACTTGTGGGACTGTGT+GGG | + | chr7.4:83214612-83214631 | None:intergenic | 50.0% | |
| AGTGGCACCTATCTAGTTGG+TGG | - | chr7.4:83212102-83212121 | MS.gene49880:intron | 50.0% | |
| ATCCTGAACCATGACGTGCA+AGG | + | chr7.4:83212811-83212830 | None:intergenic | 50.0% | |
| CACAGTGGCACCTATCTAGT+TGG | - | chr7.4:83212099-83212118 | MS.gene49880:intron | 50.0% | |
| CACCCAAGAACAAGAACAGC+TGG | + | chr7.4:83213151-83213170 | None:intergenic | 50.0% | |
| CATCTTCTGATGCTGCTGGT+GGG | - | chr7.4:83211738-83211757 | MS.gene49880:CDS | 50.0% | |
| CCACTGTGATTAGCAGCAAG+AGG | + | chr7.4:83212087-83212106 | None:intergenic | 50.0% | |
| CCAGAAGAAAACGGAACCAG+AGG | + | chr7.4:83211894-83211913 | None:intergenic | 50.0% | |
| CCGGGAGATTGCTTAAGAAG+TGG | - | chr7.4:83212592-83212611 | MS.gene49880:intron | 50.0% | |
| CCTCTTGCTGCTAATCACAG+TGG | - | chr7.4:83212084-83212103 | MS.gene49880:intron | 50.0% | |
| CTCGAAGCTGAGAAGATGCA+AGG | + | chr7.4:83211859-83211878 | None:intergenic | 50.0% | |
| CTCTATGCTGGCAGTGAAGA+TGG | - | chr7.4:83214008-83214027 | MS.gene49880:CDS | 50.0% | |
| GACGACTCGCTTCTGATATC+TGG | - | chr7.4:83212657-83212676 | MS.gene49880:intron | 50.0% | |
| GCTACCACCAAGACTGACAA+TGG | + | chr7.4:83215796-83215815 | None:intergenic | 50.0% | |
| GCTTCATCTTCTGATGCTGC+TGG | - | chr7.4:83211734-83211753 | MS.gene49880:CDS | 50.0% | |
| GGACCAGGACCAGAAGAAAA+CGG | + | chr7.4:83211903-83211922 | None:intergenic | 50.0% | |
| GGACTGTGTGGGAAAGCTTA+TGG | + | chr7.4:83214601-83214620 | None:intergenic | 50.0% | |
| TAAGCACTTGTGGGACTGTG+TGG | + | chr7.4:83214613-83214632 | None:intergenic | 50.0% | |
| TACCTTGCACGTCATGGTTC+AGG | - | chr7.4:83212806-83212825 | MS.gene49880:intron | 50.0% | |
| TCACAGACTAAGGGCCTGTT+CGG | + | chr7.4:83214665-83214684 | None:intergenic | 50.0% | |
| TCATCTTCTGATGCTGCTGG+TGG | - | chr7.4:83211737-83211756 | MS.gene49880:CDS | 50.0% | |
| TGGTTAGCACTACCGGTGAA+AGG | + | chr7.4:83212773-83212792 | None:intergenic | 50.0% | |
| TTCCATCGTCTTACTCCCGT+AGG | + | chr7.4:83214315-83214334 | None:intergenic | 50.0% | |
| TTCCTACGGGAGTAAGACGA+TGG | - | chr7.4:83214310-83214329 | MS.gene49880:intron | 50.0% | |
| TTGCCAAAAGTCGGTGCAGA+TGG | - | chr7.4:83216242-83216261 | MS.gene49880:CDS | 50.0% | |
| TTTCTTCTGGTCCTGGTCCA+AGG | - | chr7.4:83211904-83211923 | MS.gene49880:intron | 50.0% | |
| ! | AAAATGGAAGCGTGCGAGTC+TGG | - | chr7.4:83212685-83212704 | MS.gene49880:intron | 50.0% |
| ! | AGAGGCGTAATAGGTTCAGC+AGG | + | chr7.4:83212069-83212088 | None:intergenic | 50.0% |
| ! | GTTCCGTTTTCTTCTGGTCC+TGG | - | chr7.4:83211897-83211916 | MS.gene49880:intron | 50.0% |
| !! | CCTCTGGTTCCGTTTTCTTC+TGG | - | chr7.4:83211891-83211910 | MS.gene49880:intron | 50.0% |
| !! | CTAGTTGGTGGAGGTTTGTC+GGG | - | chr7.4:83212114-83212133 | MS.gene49880:intron | 50.0% |
| ACGGCCATTGTCAGTCTTGG+TGG | - | chr7.4:83215789-83215808 | MS.gene49880:intron | 55.0% | |
| GGATGCTGGGACCTTCATAC+AGG | - | chr7.4:83211764-83211783 | MS.gene49880:CDS | 55.0% | |
| GGGAGCTCAATTTCCTCCTC+TGG | - | chr7.4:83215728-83215747 | MS.gene49880:intron | 55.0% | |
| TCTGATGCTGCTGGTGGGAT+TGG | - | chr7.4:83211743-83211762 | MS.gene49880:CDS | 55.0% | |
| TGACGATGTGAGAAGACGGG+AGG | - | chr7.4:83212834-83212853 | MS.gene49880:intron | 55.0% | |
| TGCTGGTGGGATTGGATGCT+GGG | - | chr7.4:83211751-83211770 | MS.gene49880:CDS | 55.0% | |
| !! | GGCACCTATCTAGTTGGTGG+AGG | - | chr7.4:83212105-83212124 | MS.gene49880:intron | 55.0% |
| CGAGACGCAGCAACTTCCTC+TGG | - | chr7.4:83211875-83211894 | MS.gene49880:intron | 60.0% | |
| CTGCTGGTGGGATTGGATGC+TGG | - | chr7.4:83211750-83211769 | MS.gene49880:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 83211719 | 83216341 | 83211719 | ID=MS.gene49880 |
| chr7.4 | mRNA | 83211719 | 83216341 | 83211719 | ID=MS.gene49880.t1;Parent=MS.gene49880 |
| chr7.4 | exon | 83216135 | 83216341 | 83216135 | ID=MS.gene49880.t1.exon1;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83216135 | 83216341 | 83216135 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83215905 | 83216018 | 83215905 | ID=MS.gene49880.t1.exon2;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83215905 | 83216018 | 83215905 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83215342 | 83215475 | 83215342 | ID=MS.gene49880.t1.exon3;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83215342 | 83215475 | 83215342 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83215085 | 83215232 | 83215085 | ID=MS.gene49880.t1.exon4;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83215085 | 83215232 | 83215085 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83213943 | 83214142 | 83213943 | ID=MS.gene49880.t1.exon5;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83213943 | 83214142 | 83213943 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83213066 | 83213193 | 83213066 | ID=MS.gene49880.t1.exon6;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83213066 | 83213193 | 83213066 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83212179 | 83212420 | 83212179 | ID=MS.gene49880.t1.exon7;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83212179 | 83212420 | 83212179 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| chr7.4 | exon | 83211719 | 83211871 | 83211719 | ID=MS.gene49880.t1.exon8;Parent=MS.gene49880.t1 |
| chr7.4 | CDS | 83211719 | 83211871 | 83211719 | ID=cds.MS.gene49880.t1;Parent=MS.gene49880.t1 |
| Gene Sequence |
| Protein sequence |
