Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50250.t1 | XP_024639959.1 | 98.5 | 203 | 3 | 0 | 1 | 203 | 364 | 566 | 4.20E-99 | 370.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50250.t1 | B9DFS6 | 78.8 | 203 | 42 | 1 | 1 | 203 | 371 | 572 | 4.4e-81 | 302.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50250.t1 | G7JZQ0 | 98.0 | 203 | 3 | 1 | 1 | 203 | 364 | 565 | 2.8e-97 | 364.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene50250 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene50250 | 0.857348 | 1.74E-62 | -1.69E-46 |
| MS.gene052863 | MS.gene50250 | 0.829676 | 4.51E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene50250 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene50250 | 0.817709 | 2.86E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene50250 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene50250 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene50250 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene50250 | 0.803487 | 3.40E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene50250 | 0.835004 | 2.16E-56 | -1.69E-46 |
| MS.gene057314 | MS.gene50250 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene057693 | MS.gene50250 | 0.835943 | 1.25E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene50250 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene058625 | MS.gene50250 | 0.806286 | 8.85E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene50250 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene50250 | 0.83323 | 6.01E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene50250 | 0.819504 | 1.12E-52 | -1.69E-46 |
| MS.gene060689 | MS.gene50250 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene50250 | 0.812555 | 4.00E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50250.t1 | MTR_5g073280 | 98.030 | 203 | 3 | 1 | 1 | 203 | 364 | 565 | 2.35e-138 | 399 |
| MS.gene50250.t1 | MTR_5g083370 | 73.892 | 203 | 52 | 1 | 1 | 203 | 315 | 516 | 2.52e-102 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50250.t1 | AT5G58440 | 79.104 | 201 | 41 | 1 | 1 | 201 | 384 | 583 | 3.52e-112 | 333 |
| MS.gene50250.t1 | AT5G07120 | 78.818 | 203 | 42 | 1 | 1 | 203 | 371 | 572 | 4.85e-111 | 330 |
| MS.gene50250.t1 | AT5G07120 | 78.818 | 203 | 42 | 1 | 1 | 203 | 371 | 572 | 4.85e-111 | 330 |
| MS.gene50250.t1 | AT5G07120 | 79.775 | 178 | 35 | 1 | 1 | 178 | 371 | 547 | 4.27e-96 | 291 |
Find 36 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGGCTTCATCTAAAATATT+TGG | 0.114952 | 5.2:+61339528 | MS.gene50250:CDS |
| GGAGAGACGATGGGTGAATT+AGG | 0.187986 | 5.2:+61339039 | MS.gene50250:CDS |
| GGCATCTTCAGTGGCTCTTA+TGG | 0.216954 | 5.2:-61339595 | None:intergenic |
| CGGCTTCATCTAAAATATTT+GGG | 0.264146 | 5.2:+61339529 | MS.gene50250:CDS |
| GAAAGGATTTGTAGTTAATC+AGG | 0.312278 | 5.2:+61342731 | MS.gene50250:CDS |
| TAGAGCTCACGTGCTTTCTT+TGG | 0.316206 | 5.2:-61343012 | None:intergenic |
| TGAGAATGAAGAAGCTGTTT+CGG | 0.360286 | 5.2:+61339089 | MS.gene50250:CDS |
| AAACAGATTTAAATATTTGA+TGG | 0.361121 | 5.2:-61343402 | None:intergenic |
| GATACACTTCACGAATATCT+TGG | 0.384570 | 5.2:+61339393 | MS.gene50250:CDS |
| GAGAGACGATGGGTGAATTA+GGG | 0.402041 | 5.2:+61339040 | MS.gene50250:CDS |
| TTCTCAGTCCGTGAAGCATT+TGG | 0.410273 | 5.2:+61339194 | MS.gene50250:CDS |
| CTGAGAAAATTGCTAATGTC+TGG | 0.440599 | 5.2:+61342958 | MS.gene50250:CDS |
| ATTATATACCAAATGCTTCA+CGG | 0.449329 | 5.2:-61339202 | None:intergenic |
| TGCCAATGCAGGAAAACAAT+AGG | 0.461698 | 5.2:+61342655 | MS.gene50250:intron |
| AACAGATTTAAATATTTGAT+GGG | 0.477295 | 5.2:-61343401 | None:intergenic |
| TTAAATATTTGATGGGTGAT+CGG | 0.480957 | 5.2:-61343394 | None:intergenic |
| ATCAAGGACTCGGAAGTTAG+AGG | 0.505613 | 5.2:+61339560 | MS.gene50250:CDS |
| TCGGAAGTTAGAGGAGCTAC+AGG | 0.514954 | 5.2:+61339569 | MS.gene50250:CDS |
| ACATTTACACATCATTCAAA+AGG | 0.515257 | 5.2:+61343164 | MS.gene50250:CDS |
| AAGGCTTGATAGAGAGAGGC+AGG | 0.522653 | 5.2:+61342689 | MS.gene50250:CDS |
| GACTTCTTAAACATGTTGAA+AGG | 0.525181 | 5.2:+61342714 | MS.gene50250:CDS |
| GACAGTACAAACTCTTCTAT+CGG | 0.539326 | 5.2:+61339467 | MS.gene50250:CDS |
| CAGAGAATATGAGCGGATCA+AGG | 0.542532 | 5.2:+61339632 | MS.gene50250:CDS |
| GCAAGATATGGGAGAGACGA+TGG | 0.548370 | 5.2:+61339029 | None:intergenic |
| GGCTTCATCTAAAATATTTG+GGG | 0.567030 | 5.2:+61339530 | MS.gene50250:CDS |
| ACAATAGGAGTGAACTTGAA+AGG | 0.570539 | 5.2:+61342670 | MS.gene50250:CDS |
| GACGATGGGTGAATTAGGGT+TGG | 0.575302 | 5.2:+61339044 | MS.gene50250:CDS |
| GGGGCGACAAATCAAGGACT+CGG | 0.591064 | 5.2:+61339550 | MS.gene50250:CDS |
| CAAGATATGGGAGAGACGAT+GGG | 0.599204 | 5.2:+61339030 | None:intergenic |
| AAAGTTGTTGAAGACACAAG+TGG | 0.605480 | 5.2:+61342984 | MS.gene50250:CDS |
| TTGAAAGGCTTGATAGAGAG+AGG | 0.608463 | 5.2:+61342685 | MS.gene50250:CDS |
| AGCTGTTTCGGAATCTCAGA+GGG | 0.618180 | 5.2:+61339101 | MS.gene50250:CDS |
| GTACGAGCTACTGACATGAA+AGG | 0.639142 | 5.2:+61339123 | MS.gene50250:CDS |
| AAGCTGTTTCGGAATCTCAG+AGG | 0.673178 | 5.2:+61339100 | MS.gene50250:CDS |
| GCTTCATCTAAAATATTTGG+GGG | 0.679402 | 5.2:+61339531 | MS.gene50250:CDS |
| TTGCAATCAGAGAATATGAG+CGG | 0.689296 | 5.2:+61339625 | MS.gene50250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATATACATGAAAAATT+AGG | - | chr5.2:61340184-61340203 | None:intergenic | 10.0% |
| !!! | AATGAATTTATTTATTTTTC+TGG | + | chr5.2:61343328-61343347 | MS.gene50250:intron | 10.0% |
| !!! | AGTCAATTTTTATTAATTTT+TGG | + | chr5.2:61342854-61342873 | MS.gene50250:intron | 10.0% |
| !!! | ATCTATTTTAATGATATTTT+TGG | + | chr5.2:61340239-61340258 | MS.gene50250:intron | 10.0% |
| !!! | TTTAATATTTGTTCATTTTA+TGG | + | chr5.2:61342759-61342778 | MS.gene50250:intron | 10.0% |
| !! | AAAAAATAATATACCACTAT+AGG | - | chr5.2:61340576-61340595 | None:intergenic | 15.0% |
| !! | ATATGAAAATATGAAAACTT+TGG | + | chr5.2:61341369-61341388 | MS.gene50250:intron | 15.0% |
| !! | ATGAATGGATATATATATAT+AGG | + | chr5.2:61343361-61343380 | MS.gene50250:intron | 15.0% |
| !! | TTCATGTATATTTAAGTATT+TGG | + | chr5.2:61340189-61340208 | MS.gene50250:intron | 15.0% |
| !!! | AATTGTTTTTTATTTTGGTT+TGG | + | chr5.2:61339664-61339683 | MS.gene50250:intron | 15.0% |
| !!! | ATGATACATCTTTAATATTT+TGG | - | chr5.2:61341998-61342017 | None:intergenic | 15.0% |
| !!! | GGTTTAATTGTTTTTTATTT+TGG | + | chr5.2:61339659-61339678 | MS.gene50250:intron | 15.0% |
| !!! | TATATTTAAGTATTTGGTTT+GGG | + | chr5.2:61340195-61340214 | MS.gene50250:intron | 15.0% |
| !!! | TATTTTTTTGTTTGAAAACT+CGG | + | chr5.2:61340588-61340607 | MS.gene50250:intron | 15.0% |
| !! | AATAAATCAAAAGATGTGTT+TGG | + | chr5.2:61343101-61343120 | MS.gene50250:intron | 20.0% |
| !! | AATAGCAATCATATTTGTAA+AGG | - | chr5.2:61339943-61339962 | None:intergenic | 20.0% |
| !! | ATTAACTTAAGTTAATAGGT+GGG | + | chr5.2:61342930-61342949 | MS.gene50250:intron | 20.0% |
| !! | CTACAAAATACAAATACAAA+GGG | - | chr5.2:61340008-61340027 | None:intergenic | 20.0% |
| !! | GAGAGAATAATATAGTAATT+AGG | - | chr5.2:61340398-61340417 | None:intergenic | 20.0% |
| !! | GTATATTTAAGTATTTGGTT+TGG | + | chr5.2:61340194-61340213 | MS.gene50250:intron | 20.0% |
| !! | TAAACAAAATACAACTTTGA+TGG | - | chr5.2:61339810-61339829 | None:intergenic | 20.0% |
| !! | TATAACTGTAGTATACAATA+CGG | - | chr5.2:61340859-61340878 | None:intergenic | 20.0% |
| !! | TCATGAATAAGTAAAACAAA+AGG | - | chr5.2:61342418-61342437 | None:intergenic | 20.0% |
| !! | TCTACAAAATACAAATACAA+AGG | - | chr5.2:61340009-61340028 | None:intergenic | 20.0% |
| !! | TCTGATTAACTTAAGTTAAT+AGG | + | chr5.2:61342926-61342945 | MS.gene50250:intron | 20.0% |
| !! | TGATATTAATGTAAATGAGA+TGG | + | chr5.2:61341827-61341846 | MS.gene50250:intron | 20.0% |
| !!! | AAAAATGAGTTCTAGATTTA+GGG | + | chr5.2:61341714-61341733 | MS.gene50250:intron | 20.0% |
| !!! | AAGTTAAGAATTCAAGTTTT+GGG | - | chr5.2:61340305-61340324 | None:intergenic | 20.0% |
| !!! | AATTTTATTGTAAGAGAATC+AGG | - | chr5.2:61342086-61342105 | None:intergenic | 20.0% |
| !!! | AGGACAAAATAATAGATTTT+TGG | + | chr5.2:61341793-61341812 | MS.gene50250:intron | 20.0% |
| !!! | ATGTTTTAAAATGTTATACC+TGG | + | chr5.2:61342511-61342530 | MS.gene50250:intron | 20.0% |
| !!! | ATTATTAGTCTTATTGTTTG+TGG | + | chr5.2:61340125-61340144 | MS.gene50250:intron | 20.0% |
| !!! | TAAAAATGAGTTCTAGATTT+AGG | + | chr5.2:61341713-61341732 | MS.gene50250:intron | 20.0% |
| !!! | TTATTAGTCTTATTGTTTGT+GGG | + | chr5.2:61340126-61340145 | MS.gene50250:intron | 20.0% |
| ! | AAACATCATCCATTAAAAGT+AGG | - | chr5.2:61342388-61342407 | None:intergenic | 25.0% |
| ! | AAATACTGTATTCAACAAAC+TGG | + | chr5.2:61342233-61342252 | MS.gene50250:intron | 25.0% |
| ! | AATTATAAGATGAAGAAGTC+TGG | - | chr5.2:61342488-61342507 | None:intergenic | 25.0% |
| ! | ACATTTACACATCATTCAAA+AGG | + | chr5.2:61343164-61343183 | MS.gene50250:CDS | 25.0% |
| ! | ACTAGTATAAATTGGAGTTT+AGG | + | chr5.2:61340962-61340981 | MS.gene50250:intron | 25.0% |
| ! | AGTATCTTAGATTATCTCTA+AGG | - | chr5.2:61341954-61341973 | None:intergenic | 25.0% |
| ! | ATGAACTCAAAAAAAGAGAA+AGG | - | chr5.2:61340348-61340367 | None:intergenic | 25.0% |
| ! | ATGATGAACGAACTATATAA+CGG | - | chr5.2:61341075-61341094 | None:intergenic | 25.0% |
| ! | ATTATATACCAAATGCTTCA+CGG | - | chr5.2:61339205-61339224 | None:intergenic | 25.0% |
| ! | ATTCAATGTGCTGAATTTAT+AGG | + | chr5.2:61341001-61341020 | MS.gene50250:intron | 25.0% |
| ! | CAAAACTTGAATTCTTAACT+TGG | + | chr5.2:61340304-61340323 | MS.gene50250:intron | 25.0% |
| ! | CAACAATTAAACCTATTTAG+TGG | - | chr5.2:61339347-61339366 | None:intergenic | 25.0% |
| ! | CTATGTAATATGATTTCAGT+GGG | + | chr5.2:61342256-61342275 | MS.gene50250:intron | 25.0% |
| ! | GATTAACTTAAGTTAATAGG+TGG | + | chr5.2:61342929-61342948 | MS.gene50250:intron | 25.0% |
| ! | GCTTGTATATTACAGTTATT+AGG | + | chr5.2:61341634-61341653 | MS.gene50250:intron | 25.0% |
| ! | GTATGATAACTTAAAGTCAA+AGG | + | chr5.2:61341445-61341464 | MS.gene50250:intron | 25.0% |
| ! | GTATTGTATACTACAGTTAT+AGG | + | chr5.2:61340858-61340877 | MS.gene50250:intron | 25.0% |
| ! | TACTACTCACTAGTATAAAT+TGG | + | chr5.2:61340954-61340973 | MS.gene50250:intron | 25.0% |
| ! | TATAAATGGGTCTAATCTTA+TGG | + | chr5.2:61342809-61342828 | MS.gene50250:intron | 25.0% |
| ! | TATACCAGTAACTAGTAATA+AGG | - | chr5.2:61341695-61341714 | None:intergenic | 25.0% |
| ! | TATACTAGTGAGTAGTAATT+AGG | - | chr5.2:61340951-61340970 | None:intergenic | 25.0% |
| ! | TATATCTGTCAAACTATCAT+TGG | + | chr5.2:61339841-61339860 | MS.gene50250:intron | 25.0% |
| ! | TATTAATGTAAATGAGATGG+TGG | + | chr5.2:61341830-61341849 | MS.gene50250:intron | 25.0% |
| ! | TGCACTTTCCTTAATAATAA+CGG | + | chr5.2:61339316-61339335 | MS.gene50250:intron | 25.0% |
| ! | TTAACTTAAGTTAATAGGTG+GGG | + | chr5.2:61342931-61342950 | MS.gene50250:intron | 25.0% |
| ! | TTAAGATGTTAGAGTTGTTA+GGG | + | chr5.2:61340101-61340120 | MS.gene50250:intron | 25.0% |
| ! | TTAGTCGAAAATCTTCAATT+AGG | + | chr5.2:61342172-61342191 | MS.gene50250:intron | 25.0% |
| ! | TTCAAATTTCAAATCCAAAC+AGG | - | chr5.2:61341287-61341306 | None:intergenic | 25.0% |
| ! | TTCAATGTGCTGAATTTATA+GGG | + | chr5.2:61341002-61341021 | MS.gene50250:intron | 25.0% |
| ! | TTGAACTAATTACTAGTTAG+TGG | + | chr5.2:61341668-61341687 | MS.gene50250:intron | 25.0% |
| ! | TTTATTTGTAAAATCCCATC+TGG | + | chr5.2:61342149-61342168 | MS.gene50250:intron | 25.0% |
| !! | ATATAGAGCTATGCTTTAAA+TGG | - | chr5.2:61340675-61340694 | None:intergenic | 25.0% |
| !! | ATTACAGTTATTAGGTTGTT+AGG | + | chr5.2:61341642-61341661 | MS.gene50250:intron | 25.0% |
| !! | ATTTAAAGCATAGCTCTATA+TGG | + | chr5.2:61340674-61340693 | MS.gene50250:intron | 25.0% |
| !! | GAATAGTTTGCGATTTAAAA+TGG | + | chr5.2:61339731-61339750 | MS.gene50250:intron | 25.0% |
| !! | TATAGAGCTATGCTTTAAAT+GGG | - | chr5.2:61340674-61340693 | None:intergenic | 25.0% |
| !! | TGATAATGTTTCACAATAGT+AGG | - | chr5.2:61342202-61342221 | None:intergenic | 25.0% |
| !! | TGCATGATAACTTTAAGTTT+GGG | + | chr5.2:61340451-61340470 | MS.gene50250:intron | 25.0% |
| !! | TTAAATATTTGATGGGTGAT+CGG | - | chr5.2:61343397-61343416 | None:intergenic | 25.0% |
| !! | TTATATGGTCTATTTTGTCA+AGG | + | chr5.2:61341346-61341365 | MS.gene50250:intron | 25.0% |
| !! | TTGCATGATAACTTTAAGTT+TGG | + | chr5.2:61340450-61340469 | MS.gene50250:intron | 25.0% |
| !! | TTTTAAATCGCAAACTATTC+AGG | - | chr5.2:61339731-61339750 | None:intergenic | 25.0% |
| !!! | ATAAATTGGAGTTTAGGTTT+TGG | + | chr5.2:61340968-61340987 | MS.gene50250:intron | 25.0% |
| !!! | CAAGTTAAGAATTCAAGTTT+TGG | - | chr5.2:61340306-61340325 | None:intergenic | 25.0% |
| !!! | TAAATTGGAGTTTAGGTTTT+GGG | + | chr5.2:61340969-61340988 | MS.gene50250:intron | 25.0% |
| AAAACTTTGGTCATCTGTAA+AGG | + | chr5.2:61341382-61341401 | MS.gene50250:intron | 30.0% | |
| AAACAAAAAAGAGAGAGAGA+AGG | - | chr5.2:61341132-61341151 | None:intergenic | 30.0% | |
| AATAACCAAAACACTGAGTA+AGG | - | chr5.2:61341409-61341428 | None:intergenic | 30.0% | |
| AGAAAACATTTCATCTGCTT+GGG | + | chr5.2:61340524-61340543 | MS.gene50250:intron | 30.0% | |
| AGAGAATAATACATGAGTAG+CGG | - | chr5.2:61340420-61340439 | None:intergenic | 30.0% | |
| ATTAGATTAGGTTCCTATAG+TGG | + | chr5.2:61340560-61340579 | MS.gene50250:intron | 30.0% | |
| CAAATATATGTACCATAGCT+TGG | + | chr5.2:61339274-61339293 | MS.gene50250:intron | 30.0% | |
| GAAAGGATTTGTAGTTAATC+AGG | + | chr5.2:61342731-61342750 | MS.gene50250:CDS | 30.0% | |
| GACTTCTTAAACATGTTGAA+AGG | + | chr5.2:61342714-61342733 | MS.gene50250:CDS | 30.0% | |
| GATAACAAATGACCAATCAT+GGG | - | chr5.2:61339921-61339940 | None:intergenic | 30.0% | |
| GCACTTTCCTTAATAATAAC+GGG | + | chr5.2:61339317-61339336 | MS.gene50250:intron | 30.0% | |
| GCTATGTAATATGATTTCAG+TGG | + | chr5.2:61342255-61342274 | MS.gene50250:intron | 30.0% | |
| GTTAAGATGTTAGAGTTGTT+AGG | + | chr5.2:61340100-61340119 | MS.gene50250:intron | 30.0% | |
| TAACTTGGTATCATTTACCA+GGG | + | chr5.2:61340319-61340338 | MS.gene50250:intron | 30.0% | |
| TACGACTCAAGTATTCTATA+AGG | - | chr5.2:61341884-61341903 | None:intergenic | 30.0% | |
| TCTGGCAAAATATGAATGAA+TGG | + | chr5.2:61343346-61343365 | MS.gene50250:intron | 30.0% | |
| TGTAACAACTAAACCTTACA+GGG | + | chr5.2:61341608-61341627 | MS.gene50250:intron | 30.0% | |
| TTCATTAAACAAAGCAACAG+AGG | - | chr5.2:61342626-61342645 | None:intergenic | 30.0% | |
| TTGTAACAACTAAACCTTAC+AGG | + | chr5.2:61341607-61341626 | MS.gene50250:intron | 30.0% | |
| ! | CGGCTTCATCTAAAATATTT+GGG | + | chr5.2:61339529-61339548 | MS.gene50250:CDS | 30.0% |
| ! | GACTGTGGAGTAATTTTATA+TGG | + | chr5.2:61341331-61341350 | MS.gene50250:intron | 30.0% |
| ! | GCTTCATCTAAAATATTTGG+GGG | + | chr5.2:61339531-61339550 | MS.gene50250:CDS | 30.0% |
| ! | GGCTTCATCTAAAATATTTG+GGG | + | chr5.2:61339530-61339549 | MS.gene50250:CDS | 30.0% |
| ! | TTAACTTGGTATCATTTACC+AGG | + | chr5.2:61340318-61340337 | MS.gene50250:intron | 30.0% |
| ! | TTCTCTGATTGCAACATTTT+TGG | - | chr5.2:61339619-61339638 | None:intergenic | 30.0% |
| ! | TTTTCCATTTTATGCATAGC+AGG | + | chr5.2:61339371-61339390 | MS.gene50250:intron | 30.0% |
| !! | GTCATTTTGTTAGTAAGCTT+TGG | + | chr5.2:61340887-61340906 | MS.gene50250:intron | 30.0% |
| !!! | TACTCAGTGTTTTGGTTATT+TGG | + | chr5.2:61341409-61341428 | MS.gene50250:intron | 30.0% |
| !!! | TGTTTTGGTTATTTGGTTAG+AGG | + | chr5.2:61341416-61341435 | MS.gene50250:intron | 30.0% |
| AAAACCATAGGAACCCATTA+GGG | - | chr5.2:61340793-61340812 | None:intergenic | 35.0% | |
| AAAGTTGTTGAAGACACAAG+TGG | + | chr5.2:61342984-61343003 | MS.gene50250:CDS | 35.0% | |
| AACAGAGGAAATAGACAAGA+AGG | - | chr5.2:61342611-61342630 | None:intergenic | 35.0% | |
| AAGAGCAGAAAAACTTGAAG+CGG | + | chr5.2:61339509-61339528 | MS.gene50250:CDS | 35.0% | |
| AATCAAAAGATGTGTTTGGC+TGG | + | chr5.2:61343105-61343124 | MS.gene50250:intron | 35.0% | |
| AATGTTATACCTGGCATTTC+TGG | + | chr5.2:61342520-61342539 | MS.gene50250:intron | 35.0% | |
| ACAATAGGAGTGAACTTGAA+AGG | + | chr5.2:61342670-61342689 | MS.gene50250:CDS | 35.0% | |
| ACAGAGGAAATAGACAAGAA+GGG | - | chr5.2:61342610-61342629 | None:intergenic | 35.0% | |
| AGATGACTTTGTTCCAACTT+GGG | + | chr5.2:61341152-61341171 | MS.gene50250:intron | 35.0% | |
| AGTTATCATGCAATCAACAG+AGG | - | chr5.2:61340443-61340462 | None:intergenic | 35.0% | |
| ATGACCAATCATGGGAATAT+AGG | - | chr5.2:61339913-61339932 | None:intergenic | 35.0% | |
| ATGTCCTATATTCCCATGAT+TGG | + | chr5.2:61339906-61339925 | MS.gene50250:intron | 35.0% | |
| CAGAAAACATTTCATCTGCT+TGG | + | chr5.2:61340523-61340542 | MS.gene50250:intron | 35.0% | |
| CATGAGACAGATAAAACCAT+AGG | - | chr5.2:61340805-61340824 | None:intergenic | 35.0% | |
| CGAGTAGATGAAATGGTTTA+TGG | - | chr5.2:61341473-61341492 | None:intergenic | 35.0% | |
| CTGAGAAAATTGCTAATGTC+TGG | + | chr5.2:61342958-61342977 | MS.gene50250:CDS | 35.0% | |
| GAATATAGGACATTCTAAGC+TGG | - | chr5.2:61339899-61339918 | None:intergenic | 35.0% | |
| GACAGTACAAACTCTTCTAT+CGG | + | chr5.2:61339467-61339486 | MS.gene50250:CDS | 35.0% | |
| GACCAAAGCAATTCATATCA+CGG | + | chr5.2:61343277-61343296 | MS.gene50250:intron | 35.0% | |
| GATACACTTCACGAATATCT+TGG | + | chr5.2:61339393-61339412 | MS.gene50250:CDS | 35.0% | |
| GGATAACAAATGACCAATCA+TGG | - | chr5.2:61339922-61339941 | None:intergenic | 35.0% | |
| GTAACAACTAAACCTTACAG+GGG | + | chr5.2:61341609-61341628 | MS.gene50250:intron | 35.0% | |
| GTAAGAGAATCAGGAATAGA+GGG | - | chr5.2:61342077-61342096 | None:intergenic | 35.0% | |
| GTATCCTGCTATGCATAAAA+TGG | - | chr5.2:61339378-61339397 | None:intergenic | 35.0% | |
| GTGTTCATCGCTGTATAAAT+GGG | + | chr5.2:61342796-61342815 | MS.gene50250:intron | 35.0% | |
| TAAAACCATAGGAACCCATT+AGG | - | chr5.2:61340794-61340813 | None:intergenic | 35.0% | |
| TAAGAGAATCAGGAATAGAG+GGG | - | chr5.2:61342076-61342095 | None:intergenic | 35.0% | |
| TAGATGACTTTGTTCCAACT+TGG | + | chr5.2:61341151-61341170 | MS.gene50250:intron | 35.0% | |
| TCAATGTAGATGCATATAGC+AGG | - | chr5.2:61340065-61340084 | None:intergenic | 35.0% | |
| TGAGAATGAAGAAGCTGTTT+CGG | + | chr5.2:61339089-61339108 | MS.gene50250:CDS | 35.0% | |
| TGGACCTTATTACTAGTTAC+TGG | + | chr5.2:61341688-61341707 | MS.gene50250:intron | 35.0% | |
| TGGATTGCCCGTTATTATTA+AGG | - | chr5.2:61339327-61339346 | None:intergenic | 35.0% | |
| TGTAAGAATATGCCAAGCTA+TGG | - | chr5.2:61339289-61339308 | None:intergenic | 35.0% | |
| TGTAAGAGAATCAGGAATAG+AGG | - | chr5.2:61342078-61342097 | None:intergenic | 35.0% | |
| TGTGTTCATCGCTGTATAAA+TGG | + | chr5.2:61342795-61342814 | MS.gene50250:intron | 35.0% | |
| TTCCGTGATATGAATTGCTT+TGG | - | chr5.2:61343282-61343301 | None:intergenic | 35.0% | |
| TTGCAATCAGAGAATATGAG+CGG | + | chr5.2:61339625-61339644 | MS.gene50250:CDS | 35.0% | |
| TTGGTTATTTGGTTAGAGGT+GGG | + | chr5.2:61341420-61341439 | MS.gene50250:intron | 35.0% | |
| TTTATCTGTCTCATGTTTGC+AGG | + | chr5.2:61340810-61340829 | MS.gene50250:intron | 35.0% | |
| TTTGGTTATTTGGTTAGAGG+TGG | + | chr5.2:61341419-61341438 | MS.gene50250:intron | 35.0% | |
| ! | AAGATTTTCGACTAACCAGA+TGG | - | chr5.2:61342167-61342186 | None:intergenic | 35.0% |
| ! | AGATTTTCGACTAACCAGAT+GGG | - | chr5.2:61342166-61342185 | None:intergenic | 35.0% |
| ! | CAAGCAGATGAAATGTTTTC+TGG | - | chr5.2:61340525-61340544 | None:intergenic | 35.0% |
| ! | GAATACAGACATTCTGAGAA+TGG | - | chr5.2:61343076-61343095 | None:intergenic | 35.0% |
| ! | GCGGCTTCATCTAAAATATT+TGG | + | chr5.2:61339528-61339547 | MS.gene50250:CDS | 35.0% |
| ! | GTTTAGTCTTTCATGCATTC+TGG | + | chr5.2:61342452-61342471 | MS.gene50250:intron | 35.0% |
| ! | TGTGTGTGGAGTATTAGATT+AGG | + | chr5.2:61340548-61340567 | MS.gene50250:intron | 35.0% |
| ! | TTTTTCTGCTCTTGATTGCA+AGG | - | chr5.2:61339502-61339521 | None:intergenic | 35.0% |
| !! | AATTGATTTCCCTCCCTTTT+TGG | + | chr5.2:61341099-61341118 | MS.gene50250:intron | 35.0% |
| !! | TCTTTCATGCATTCTGGTTT+GGG | + | chr5.2:61342458-61342477 | MS.gene50250:intron | 35.0% |
| !!! | AACATTTTTGGCATCTTCAG+TGG | - | chr5.2:61339607-61339626 | None:intergenic | 35.0% |
| !!! | AAGAATTCAAGTTTTGGGTC+AGG | - | chr5.2:61340300-61340319 | None:intergenic | 35.0% |
| !!! | AGAATTCAAGTTTTGGGTCA+GGG | - | chr5.2:61340299-61340318 | None:intergenic | 35.0% |
| AAAAAAGAGAAAGGAGACCC+TGG | - | chr5.2:61340339-61340358 | None:intergenic | 40.0% | |
| AAACATCTACCAGAAATGCC+AGG | - | chr5.2:61342532-61342551 | None:intergenic | 40.0% | |
| AACCCAAGATTTGTGGTTCA+GGG | + | chr5.2:61341514-61341533 | MS.gene50250:intron | 40.0% | |
| AACTAGAGCAAATCCCAAGT+TGG | - | chr5.2:61341168-61341187 | None:intergenic | 40.0% | |
| AAGTTTGGGAATCAGTTCAG+AGG | + | chr5.2:61340465-61340484 | MS.gene50250:intron | 40.0% | |
| ATTGGACTCCTCAGATTAGT+CGG | - | chr5.2:61340629-61340648 | None:intergenic | 40.0% | |
| CAGAGGAAATAGACAAGAAG+GGG | - | chr5.2:61342609-61342628 | None:intergenic | 40.0% | |
| CATGTCACGAGTAGATGAAA+TGG | - | chr5.2:61341480-61341499 | None:intergenic | 40.0% | |
| GAGATAGAACCCAAGATTTG+TGG | + | chr5.2:61341507-61341526 | MS.gene50250:intron | 40.0% | |
| GTCAGGGAAGAAAAGAGAAA+AGG | - | chr5.2:61340283-61340302 | None:intergenic | 40.0% | |
| GTTGAGACGTTTAGGTATAG+AGG | + | chr5.2:61341769-61341788 | MS.gene50250:intron | 40.0% | |
| TCTTCGACCTTTCACTTCAA+AGG | - | chr5.2:61340500-61340519 | None:intergenic | 40.0% | |
| TGACTCTTGCATCTTTCACA+AGG | + | chr5.2:61343219-61343238 | MS.gene50250:intron | 40.0% | |
| TGCACTTCTTGTCTTCTGTT+CGG | + | chr5.2:61342355-61342374 | MS.gene50250:intron | 40.0% | |
| TGCCAATGCAGGAAAACAAT+AGG | + | chr5.2:61342655-61342674 | MS.gene50250:intron | 40.0% | |
| TGTTATCTGCTCATGTTTGC+TGG | + | chr5.2:61341577-61341596 | MS.gene50250:intron | 40.0% | |
| TTGAAAGGCTTGATAGAGAG+AGG | + | chr5.2:61342685-61342704 | MS.gene50250:CDS | 40.0% | |
| TTTATAGGGTCCAGACCATT+AGG | + | chr5.2:61341016-61341035 | MS.gene50250:intron | 40.0% | |
| ! | AAGGACCTTACTCAGTGTTT+TGG | + | chr5.2:61341401-61341420 | MS.gene50250:intron | 40.0% |
| ! | AATGATGATGATGCCAATGC+AGG | + | chr5.2:61342644-61342663 | MS.gene50250:intron | 40.0% |
| ! | CTCCTATTGTTTTCCTGCAT+TGG | - | chr5.2:61342660-61342679 | None:intergenic | 40.0% |
| ! | GTCTTTCATGCATTCTGGTT+TGG | + | chr5.2:61342457-61342476 | MS.gene50250:intron | 40.0% |
| ! | GTTATAGCGTTGAGACGTTT+AGG | + | chr5.2:61341761-61341780 | MS.gene50250:intron | 40.0% |
| ! | TAACGGGCAATCCACTAAAT+AGG | + | chr5.2:61339333-61339352 | MS.gene50250:intron | 40.0% |
| !! | AGTCTTATTGTTTGTGGGCT+TGG | + | chr5.2:61340131-61340150 | MS.gene50250:intron | 40.0% |
| !! | TGGCATTTCTGGTAGATGTT+TGG | + | chr5.2:61342531-61342550 | MS.gene50250:intron | 40.0% |
| !! | TTGTTTGAAAACTCGGTGTC+CGG | + | chr5.2:61340595-61340614 | MS.gene50250:intron | 40.0% |
| ACAACTAAACCTTACAGGGG+AGG | + | chr5.2:61341612-61341631 | MS.gene50250:intron | 45.0% | |
| ACCCAAGATTTGTGGTTCAG+GGG | + | chr5.2:61341515-61341534 | MS.gene50250:intron | 45.0% | |
| ACCTTTAGGCCAACCCTAAT+GGG | + | chr5.2:61340777-61340796 | MS.gene50250:intron | 45.0% | |
| AGACGTTTAGGTATAGAGGC+AGG | + | chr5.2:61341773-61341792 | MS.gene50250:intron | 45.0% | |
| ATATACAAGCCTCCCCTGTA+AGG | - | chr5.2:61341624-61341643 | None:intergenic | 45.0% | |
| ATATGAGCGGATCAAGGTAG+AGG | + | chr5.2:61339638-61339657 | MS.gene50250:intron | 45.0% | |
| ATCAAGGACTCGGAAGTTAG+AGG | + | chr5.2:61339560-61339579 | MS.gene50250:CDS | 45.0% | |
| CAGAGAATATGAGCGGATCA+AGG | + | chr5.2:61339632-61339651 | MS.gene50250:CDS | 45.0% | |
| CCAAAGGTCTTTGGCTAGAA+AGG | + | chr5.2:61341550-61341569 | MS.gene50250:intron | 45.0% | |
| GAACAGCATCCAAACAAGCT+AGG | - | chr5.2:61341218-61341237 | None:intergenic | 45.0% | |
| GAACCCAAGATTTGTGGTTC+AGG | + | chr5.2:61341513-61341532 | MS.gene50250:intron | 45.0% | |
| GAGAGACGATGGGTGAATTA+GGG | + | chr5.2:61339040-61339059 | MS.gene50250:CDS | 45.0% | |
| GTACGAGCTACTGACATGAA+AGG | + | chr5.2:61339123-61339142 | MS.gene50250:CDS | 45.0% | |
| TACGAGGTTCCAAAGGTCTT+TGG | + | chr5.2:61341541-61341560 | MS.gene50250:intron | 45.0% | |
| TAGAGCTCACGTGCTTTCTT+TGG | - | chr5.2:61343015-61343034 | None:intergenic | 45.0% | |
| TATTTGGGGGCGACAAATCA+AGG | + | chr5.2:61339544-61339563 | MS.gene50250:CDS | 45.0% | |
| TCATCTACTCGTGACATGTG+TGG | + | chr5.2:61341482-61341501 | MS.gene50250:intron | 45.0% | |
| TCGACCTTTCACTTCAAAGG+TGG | - | chr5.2:61340497-61340516 | None:intergenic | 45.0% | |
| TCTTGTCTTCTGTTCGGTCA+GGG | + | chr5.2:61342361-61342380 | MS.gene50250:intron | 45.0% | |
| TGGACTTAGCCCACTGAAAT+TGG | + | chr5.2:61340694-61340713 | MS.gene50250:intron | 45.0% | |
| TGGCCTAAAGGTCTTGGTTT+GGG | - | chr5.2:61340769-61340788 | None:intergenic | 45.0% | |
| TTCTTGTCTTCTGTTCGGTC+AGG | + | chr5.2:61342360-61342379 | MS.gene50250:intron | 45.0% | |
| TTGGCCTAAAGGTCTTGGTT+TGG | - | chr5.2:61340770-61340789 | None:intergenic | 45.0% | |
| ! | AAGCTGTTTCGGAATCTCAG+AGG | + | chr5.2:61339100-61339119 | MS.gene50250:CDS | 45.0% |
| ! | ACGTTGCTACTTGAAGACTG+TGG | + | chr5.2:61341309-61341328 | MS.gene50250:intron | 45.0% |
| ! | AGCTGTTTCGGAATCTCAGA+GGG | + | chr5.2:61339101-61339120 | MS.gene50250:CDS | 45.0% |
| ! | CCTTTCTAGCCAAAGACCTT+TGG | - | chr5.2:61341553-61341572 | None:intergenic | 45.0% |
| ! | GATGTGTTTGGCTGGTTCAT+AGG | + | chr5.2:61343113-61343132 | MS.gene50250:intron | 45.0% |
| ! | TACTTGAAGACTGTGGACTG+TGG | + | chr5.2:61341316-61341335 | MS.gene50250:intron | 45.0% |
| ! | TTCTCAGTCCGTGAAGCATT+TGG | + | chr5.2:61339194-61339213 | MS.gene50250:CDS | 45.0% |
| !! | ATGGCCACCTTTGAAGTGAA+AGG | + | chr5.2:61340490-61340509 | MS.gene50250:intron | 45.0% |
| !! | GGTCAGGGACCTACTTTTAA+TGG | + | chr5.2:61342376-61342395 | MS.gene50250:intron | 45.0% |
| !! | TCCAGACCATTAGGTGTTGA+GGG | + | chr5.2:61341025-61341044 | MS.gene50250:intron | 45.0% |
| AAAGAGAGAGAGAAGGCCCT+TGG | - | chr5.2:61341125-61341144 | None:intergenic | 50.0% | |
| AAGGCTTGATAGAGAGAGGC+AGG | + | chr5.2:61342689-61342708 | MS.gene50250:CDS | 50.0% | |
| AGAAGGCCCTTGGCCAAAAA+GGG | - | chr5.2:61341115-61341134 | None:intergenic | 50.0% | |
| AGGTCTTTGGCTAGAAAGGC+TGG | + | chr5.2:61341554-61341573 | MS.gene50250:intron | 50.0% | |
| CATCCAAACAAGCTAGGCAG+AGG | - | chr5.2:61341212-61341231 | None:intergenic | 50.0% | |
| CCATAGGAACCCATTAGGGT+TGG | - | chr5.2:61340789-61340808 | None:intergenic | 50.0% | |
| CCCAAGATTTGTGGTTCAGG+GGG | + | chr5.2:61341516-61341535 | MS.gene50250:intron | 50.0% | |
| CCCCCTGAACCACAAATCTT+GGG | - | chr5.2:61341519-61341538 | None:intergenic | 50.0% | |
| CTTGAGATGAGCACACTCCA+AGG | + | chr5.2:61340742-61340761 | MS.gene50250:intron | 50.0% | |
| CTTGGAGTGTGCTCATCTCA+AGG | - | chr5.2:61340744-61340763 | None:intergenic | 50.0% | |
| GACCTTTAGGCCAACCCTAA+TGG | + | chr5.2:61340776-61340795 | MS.gene50250:intron | 50.0% | |
| GACGATGGGTGAATTAGGGT+TGG | + | chr5.2:61339044-61339063 | MS.gene50250:CDS | 50.0% | |
| GATGCAGCAGACAGAACACT+AGG | - | chr5.2:61342283-61342302 | None:intergenic | 50.0% | |
| GCATCTTTGCACGACCTGTT+TGG | + | chr5.2:61341270-61341289 | MS.gene50250:intron | 50.0% | |
| GGAGAGACGATGGGTGAATT+AGG | + | chr5.2:61339039-61339058 | MS.gene50250:CDS | 50.0% | |
| GGCATCTTCAGTGGCTCTTA+TGG | - | chr5.2:61339598-61339617 | None:intergenic | 50.0% | |
| GGGAATCAGTTCAGAGGTCA+TGG | + | chr5.2:61340471-61340490 | MS.gene50250:intron | 50.0% | |
| GGTCCCAAACCAAGACCTTT+AGG | + | chr5.2:61340763-61340782 | MS.gene50250:intron | 50.0% | |
| GGTCGTGCAAAGATGCAGTA+AGG | - | chr5.2:61341266-61341285 | None:intergenic | 50.0% | |
| TCATCTGCTTGGGATGTGTG+TGG | + | chr5.2:61340534-61340553 | MS.gene50250:intron | 50.0% | |
| TCCCCCTGAACCACAAATCT+TGG | - | chr5.2:61341520-61341539 | None:intergenic | 50.0% | |
| TCCCTCAACACCTAATGGTC+TGG | - | chr5.2:61341029-61341048 | None:intergenic | 50.0% | |
| TCGGAAGTTAGAGGAGCTAC+AGG | + | chr5.2:61339569-61339588 | MS.gene50250:CDS | 50.0% | |
| TGTCCTCCCTCAACACCTAA+TGG | - | chr5.2:61341034-61341053 | None:intergenic | 50.0% | |
| ! | CCTCAGATTAGTCGGTCCTT+GGG | - | chr5.2:61340621-61340640 | None:intergenic | 50.0% |
| ! | GTCCAGACCATTAGGTGTTG+AGG | + | chr5.2:61341024-61341043 | MS.gene50250:intron | 50.0% |
| ! | TCCTCAGATTAGTCGGTCCT+TGG | - | chr5.2:61340622-61340641 | None:intergenic | 50.0% |
| !! | AAGGTCTTGGTTTGGGACCT+TGG | - | chr5.2:61340762-61340781 | None:intergenic | 50.0% |
| !! | ACCCATTAGGGTTGGCCTAA+AGG | - | chr5.2:61340781-61340800 | None:intergenic | 50.0% |
| !! | AGACCATTAGGTGTTGAGGG+AGG | + | chr5.2:61341028-61341047 | MS.gene50250:intron | 50.0% |
| !! | ATGCCTCTGCCTAGCTTGTT+TGG | + | chr5.2:61341206-61341225 | MS.gene50250:intron | 50.0% |
| !! | CCAACCCTAATGGGTTCCTA+TGG | + | chr5.2:61340786-61340805 | MS.gene50250:intron | 50.0% |
| !! | TAGGGTTGGCCTAAAGGTCT+TGG | - | chr5.2:61340775-61340794 | None:intergenic | 50.0% |
| !! | TTCCCTCCCTTTTTGGCCAA+GGG | + | chr5.2:61341106-61341125 | MS.gene50250:intron | 50.0% |
| !! | TTTCCCTCCCTTTTTGGCCA+AGG | + | chr5.2:61341105-61341124 | MS.gene50250:intron | 50.0% |
| AATTCCACCGTCCACTTGCG+GGG | + | chr5.2:61340646-61340665 | MS.gene50250:intron | 55.0% | |
| AGCCCACTGAAATTGGCACC+AGG | + | chr5.2:61340701-61340720 | MS.gene50250:intron | 55.0% | |
| CAATTCCACCGTCCACTTGC+GGG | + | chr5.2:61340645-61340664 | MS.gene50250:intron | 55.0% | |
| CACTGAAATTGGCACCAGGG+GGG | + | chr5.2:61340705-61340724 | MS.gene50250:intron | 55.0% | |
| CCAATTCCACCGTCCACTTG+CGG | + | chr5.2:61340644-61340663 | MS.gene50250:intron | 55.0% | |
| CCACTGAAATTGGCACCAGG+GGG | + | chr5.2:61340704-61340723 | MS.gene50250:intron | 55.0% | |
| CCCAAGGACCGACTAATCTG+AGG | + | chr5.2:61340618-61340637 | MS.gene50250:intron | 55.0% | |
| CCCACTGAAATTGGCACCAG+GGG | + | chr5.2:61340703-61340722 | MS.gene50250:intron | 55.0% | |
| GAGAAGGCCCTTGGCCAAAA+AGG | - | chr5.2:61341116-61341135 | None:intergenic | 55.0% | |
| GCCCACTGAAATTGGCACCA+GGG | + | chr5.2:61340702-61340721 | MS.gene50250:intron | 55.0% | |
| GGGGCGACAAATCAAGGACT+CGG | + | chr5.2:61339550-61339569 | MS.gene50250:CDS | 55.0% | |
| TTAAATGGGACCCCCGCAAG+TGG | - | chr5.2:61340660-61340679 | None:intergenic | 55.0% | |
| ! | AGATTAGTCGGTCCTTGGGC+CGG | - | chr5.2:61340617-61340636 | None:intergenic | 55.0% |
| ! | CCCCTGGTGCCAATTTCAGT+GGG | - | chr5.2:61340706-61340725 | None:intergenic | 55.0% |
| AGGCCCTTGGCCAAAAAGGG+AGG | - | chr5.2:61341112-61341131 | None:intergenic | 60.0% | |
| ATTCCACCGTCCACTTGCGG+GGG | + | chr5.2:61340647-61340666 | MS.gene50250:intron | 60.0% | |
| CCGCAAGTGGACGGTGGAAT+TGG | - | chr5.2:61340647-61340666 | None:intergenic | 60.0% | |
| GGCCCTTGGCCAAAAAGGGA+GGG | - | chr5.2:61341111-61341130 | None:intergenic | 60.0% | |
| ! | CCCCCTGGTGCCAATTTCAG+TGG | - | chr5.2:61340707-61340726 | None:intergenic | 60.0% |
| ! | GGGGGAGTACGAGGTTCCAA+AGG | + | chr5.2:61341534-61341553 | MS.gene50250:intron | 60.0% |
| ! | TGTGGTTCAGGGGGAGTACG+AGG | + | chr5.2:61341525-61341544 | MS.gene50250:intron | 60.0% |
| !! | AAAACTCGGTGTCCGGCCCA+AGG | + | chr5.2:61340602-61340621 | MS.gene50250:intron | 60.0% |
| ATGGGACCCCCGCAAGTGGA+CGG | - | chr5.2:61340656-61340675 | None:intergenic | 65.0% | |
| GTCTCGCGTTTGATCCCCCC+TGG | - | chr5.2:61340722-61340741 | None:intergenic | 65.0% | |
| GGACCCCCGCAAGTGGACGG+TGG | - | chr5.2:61340653-61340672 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 61339036 | 61343416 | 61339036 | ID=MS.gene50250 |
| chr5.2 | mRNA | 61339036 | 61343416 | 61339036 | ID=MS.gene50250.t1;Parent=MS.gene50250 |
| chr5.2 | exon | 61339036 | 61339215 | 61339036 | ID=MS.gene50250.t1.exon1;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61339036 | 61339215 | 61339036 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| chr5.2 | exon | 61339390 | 61339653 | 61339390 | ID=MS.gene50250.t1.exon2;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61339390 | 61339653 | 61339390 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| chr5.2 | exon | 61342666 | 61342752 | 61342666 | ID=MS.gene50250.t1.exon3;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61342666 | 61342752 | 61342666 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| chr5.2 | exon | 61342948 | 61343024 | 61342948 | ID=MS.gene50250.t1.exon4;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61342948 | 61343024 | 61342948 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| chr5.2 | exon | 61343135 | 61343185 | 61343135 | ID=MS.gene50250.t1.exon5;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61343135 | 61343185 | 61343135 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| chr5.2 | exon | 61343383 | 61343416 | 61343383 | ID=MS.gene50250.t1.exon6;Parent=MS.gene50250.t1 |
| chr5.2 | CDS | 61343383 | 61343416 | 61343383 | ID=cds.MS.gene50250.t1;Parent=MS.gene50250.t1 |
| Gene Sequence |
| Protein sequence |
