Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54622.t1 | XP_003611391.1 | 97.1 | 823 | 24 | 0 | 1 | 823 | 162 | 984 | 0.00E+00 | 1506.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54622.t1 | Q9LKI5 | 63.2 | 828 | 268 | 5 | 1 | 823 | 161 | 956 | 2.4e-286 | 986.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54622.t1 | G7JYL5 | 97.1 | 823 | 24 | 0 | 1 | 823 | 162 | 984 | 0.0e+00 | 1506.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene54622 | 0.816196 | 6.26E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene54622 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene050654 | MS.gene54622 | 0.823137 | 1.63E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene54622 | 0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene54622 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene54622 | 0.834903 | 2.29E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene54622 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene54622 | 0.816626 | 5.02E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene54622 | 0.831865 | 1.31E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene54622 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene54622 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene54622 | 0.824294 | 8.73E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene54622 | 0.829436 | 5.15E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene54622 | 0.853861 | 1.81E-61 | -1.69E-46 |
| MS.gene056045 | MS.gene54622 | 0.825181 | 5.39E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene54622 | 0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene54622 | 0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene54622 | 0.801848 | 7.42E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene54622 | 0.801773 | 7.69E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene54622 | 0.834087 | 3.67E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene54622 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene059144 | MS.gene54622 | 0.812612 | 3.88E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene54622 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene059965 | MS.gene54622 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene54622 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene54622 | 0.80417 | 2.46E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene54622 | 0.806919 | 6.51E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene54622 | 0.827143 | 1.84E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene54622 | 0.81554 | 8.78E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene54622 | 0.80472 | 1.89E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene54622 | 0.830296 | 3.18E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54622.t1 | MTR_5g013480 | 98.542 | 823 | 12 | 0 | 1 | 823 | 162 | 984 | 0.0 | 1682 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54622.t1 | AT5G41150 | 66.345 | 829 | 240 | 6 | 1 | 823 | 161 | 956 | 0.0 | 1102 |
| MS.gene54622.t1 | AT5G41150 | 64.868 | 760 | 228 | 6 | 1 | 754 | 161 | 887 | 0.0 | 979 |
| MS.gene54622.t1 | AT5G41150 | 60.357 | 560 | 185 | 5 | 1 | 555 | 161 | 688 | 0.0 | 642 |
| MS.gene54622.t1 | AT5G41150 | 60.357 | 560 | 185 | 5 | 1 | 555 | 161 | 688 | 0.0 | 642 |
Find 204 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCCTCAGGCCATGGTTTC+TGG | 0.039215 | 5.3:-6630670 | None:intergenic |
| CACCGGATGTGGTGGATATT+AGG | 0.180382 | 5.3:-6630546 | MS.gene54622:CDS |
| GGATAAGAGCTTCTCATTTC+AGG | 0.182092 | 5.3:-6626471 | MS.gene54622:intron |
| TTCCTTTCCACGCAAATTAA+TGG | 0.186365 | 5.3:+6626602 | None:intergenic |
| TGTATTCTGTCCAAGGGATA+TGG | 0.222718 | 5.3:+6627796 | None:intergenic |
| GGTGACTTACTTGAAATATT+TGG | 0.224245 | 5.3:-6629682 | MS.gene54622:CDS |
| CCAAAGGATCCTAAGGGTTT+TGG | 0.230872 | 5.3:-6627839 | MS.gene54622:CDS |
| ACATTTATGGCCGAGATTTC+AGG | 0.231804 | 5.3:-6630599 | MS.gene54622:CDS |
| GATCCAATTTGGCATACTTT+AGG | 0.235008 | 5.3:-6630361 | MS.gene54622:CDS |
| TTCCCTAAAGTATGCCAAAT+TGG | 0.239779 | 5.3:+6630358 | None:intergenic |
| GTGTTACAGATTCTAATTAT+AGG | 0.253075 | 5.3:-6625322 | MS.gene54622:CDS |
| GGTTACGGAAGTTACATTTA+TGG | 0.258472 | 5.3:-6630612 | MS.gene54622:CDS |
| CAACTTTGATATAATGCTAT+TGG | 0.284544 | 5.3:+6626018 | None:intergenic |
| CGTGGAAAGGAAAAGTATTC+AGG | 0.296025 | 5.3:-6626591 | MS.gene54622:CDS |
| TGGAAAAGGCAAGAGAAAAT+TGG | 0.303152 | 5.3:-6627645 | MS.gene54622:CDS |
| GAATCCCTCTAAAAGGTTAA+AGG | 0.308417 | 5.3:-6627258 | MS.gene54622:CDS |
| TATCAGAGTGGGCATGGTTT+AGG | 0.314337 | 5.3:-6626919 | MS.gene54622:intron |
| TAGCATCTAGAAAGTCTCTA+AGG | 0.318207 | 5.3:+6625204 | None:intergenic |
| AGATACCCCTCAGTCTGATT+TGG | 0.321552 | 5.3:-6627681 | MS.gene54622:CDS |
| GAGAGGACGATGAAGTGTTT+AGG | 0.322791 | 5.3:-6630634 | MS.gene54622:CDS |
| ATCCAATTTGGCATACTTTA+GGG | 0.326230 | 5.3:-6630360 | MS.gene54622:CDS |
| GAAAGCGATTGTTGAGGTTA+TGG | 0.328674 | 5.3:-6630491 | MS.gene54622:CDS |
| TACCAGTCTGCCAGTGATAT+TGG | 0.329348 | 5.3:-6626055 | MS.gene54622:intron |
| TCCAAATATTCTTCATCAAA+AGG | 0.334364 | 5.3:-6626675 | MS.gene54622:CDS |
| AGAAAAGCTAGCTGAAATAA+TGG | 0.338312 | 5.3:-6625249 | MS.gene54622:CDS |
| ACCGGATGTGGTGGATATTA+GGG | 0.338897 | 5.3:-6630545 | MS.gene54622:CDS |
| AAGCTGAGAATCCCTCTAAA+AGG | 0.342926 | 5.3:-6627265 | MS.gene54622:CDS |
| CCAAAACCCTTAGGATCCTT+TGG | 0.343817 | 5.3:+6627839 | None:intergenic |
| GCAGGAGCATGATGCACTTC+TGG | 0.348700 | 5.3:-6627753 | MS.gene54622:CDS |
| TGTTACAGATTCTAATTATA+GGG | 0.349584 | 5.3:-6625321 | MS.gene54622:CDS |
| AACTTTGATATAATGCTATT+GGG | 0.350549 | 5.3:+6626019 | None:intergenic |
| AGAGGACGATGAAGTGTTTA+GGG | 0.352656 | 5.3:-6630633 | MS.gene54622:CDS |
| AGAGATGAGGAAGACGAATA+AGG | 0.361182 | 5.3:-6630455 | MS.gene54622:CDS |
| TAGTATTTAAATCTGAATCT+AGG | 0.363787 | 5.3:+6626884 | None:intergenic |
| TGAAAGTGATCAGCCTATAC+TGG | 0.367474 | 5.3:-6627360 | MS.gene54622:CDS |
| GTAAAACAAACCTGGTCAAT+TGG | 0.376126 | 5.3:+6627122 | None:intergenic |
| GGAAAAGGCAAGAGAAAATT+GGG | 0.376193 | 5.3:-6627644 | MS.gene54622:CDS |
| GAAGTGGCAAGTGGTAAAAC+TGG | 0.379166 | 5.3:-6627563 | MS.gene54622:CDS |
| TTCTAATTATAGGGCCATAA+TGG | 0.379915 | 5.3:-6625312 | MS.gene54622:CDS |
| CCATCTCTTGCCATGGCATC+AGG | 0.379982 | 5.3:+6627416 | None:intergenic |
| GGAGACAGTTGGATCCAATT+TGG | 0.389564 | 5.3:-6630372 | MS.gene54622:CDS |
| AATGGATGGGTGTAAAAGTT+TGG | 0.391473 | 5.3:-6625294 | MS.gene54622:CDS |
| TGAAATATTTGCTTCACTAA+AGG | 0.402091 | 5.3:-6625930 | MS.gene54622:CDS |
| CCACGCAAATTAATGGTGAT+AGG | 0.403076 | 5.3:+6626609 | None:intergenic |
| CGATGAAGTGTTTAGGGTTA+CGG | 0.407072 | 5.3:-6630627 | MS.gene54622:CDS |
| GAGTTTCTAAGACGACTTCC+TGG | 0.412129 | 5.3:-6625344 | MS.gene54622:CDS |
| GGTGGACATGTTCGTGGAAA+AGG | 0.414905 | 5.3:-6627659 | MS.gene54622:CDS |
| AGAAAATTGGGGAATAGAAA+TGG | 0.415060 | 5.3:-6627632 | MS.gene54622:CDS |
| GATACCCCTCAGTCTGATTT+GGG | 0.419551 | 5.3:-6627680 | MS.gene54622:CDS |
| TAAGACGTTGAGGAAGTTGT+TGG | 0.419685 | 5.3:-6630308 | MS.gene54622:CDS |
| ATTTCAGGTTTATGTGAGTC+AGG | 0.422071 | 5.3:-6630584 | MS.gene54622:CDS |
| GAGGATTTGACGGTGGAGAA+TGG | 0.423362 | 5.3:-6630424 | MS.gene54622:CDS |
| GAAAAGCTAGCTGAAATAAT+GGG | 0.430775 | 5.3:-6625248 | MS.gene54622:CDS |
| GGTTCCGATGACGAAGTATA+TGG | 0.431073 | 5.3:-6630524 | MS.gene54622:CDS |
| CTTGGACAGAATACAGAAAC+TGG | 0.434228 | 5.3:-6627788 | MS.gene54622:CDS |
| TAGTGTTCAGAGTAACAATA+AGG | 0.435873 | 5.3:-6627588 | MS.gene54622:CDS |
| TCTCTTACAAAGGTCATGTC+TGG | 0.440456 | 5.3:+6627302 | None:intergenic |
| CCAAATATTCTTCATCAAAA+GGG | 0.444882 | 5.3:-6626674 | MS.gene54622:CDS |
| GTATAGGCTGATCACTTTCA+AGG | 0.445016 | 5.3:+6627363 | None:intergenic |
| CATAGTATTGGAAGAAGTCT+TGG | 0.450907 | 5.3:-6629236 | MS.gene54622:CDS |
| TTCCCCGGCTACGTATAATC+TGG | 0.457803 | 5.3:-6625976 | MS.gene54622:CDS |
| CTAGAGCCATCAATAATGAT+TGG | 0.459040 | 5.3:+6627608 | None:intergenic |
| CACCATTAATTTGCGTGGAA+AGG | 0.459042 | 5.3:-6626604 | MS.gene54622:CDS |
| AGGATTTGACGGTGGAGAAT+GGG | 0.460766 | 5.3:-6630423 | MS.gene54622:CDS |
| AGTTGTTGGATTATCTAGTC+AGG | 0.461734 | 5.3:-6630294 | MS.gene54622:intron |
| AATGGCCCAATCATTATTGA+TGG | 0.462309 | 5.3:-6627614 | MS.gene54622:CDS |
| GGATATTCTTGAAGAGGTAG+AGG | 0.463581 | 5.3:-6628957 | MS.gene54622:CDS |
| TACTATGCCATGATTTGAAC+TGG | 0.464434 | 5.3:+6629252 | None:intergenic |
| TTCAAATCATGGCATAGTAT+TGG | 0.467334 | 5.3:-6629248 | MS.gene54622:CDS |
| GTATTCTGTCCAAGGGATAT+GGG | 0.469017 | 5.3:+6627797 | None:intergenic |
| GACTTCGATTTCTCTTACAA+AGG | 0.470567 | 5.3:+6627292 | None:intergenic |
| AAAGAAGCCAAAGGATCCTA+AGG | 0.472095 | 5.3:-6627846 | MS.gene54622:CDS |
| TCCACAATTCCTTCTTCTGA+CGG | 0.475046 | 5.3:+6625860 | None:intergenic |
| GCTGTTTATCAGAGTGGGCA+TGG | 0.475784 | 5.3:-6626925 | MS.gene54622:intron |
| GGATATAGTCACCAACTTCA+AGG | 0.475904 | 5.3:+6626630 | None:intergenic |
| CAGTTTCTGTATTCTGTCCA+AGG | 0.478718 | 5.3:+6627789 | None:intergenic |
| CACCAATACAATGCCATTGT+CGG | 0.479002 | 5.3:+6628877 | None:intergenic |
| TGAAGGTCATTCAAGATGAA+TGG | 0.479387 | 5.3:-6627919 | MS.gene54622:intron |
| AGAGGTTGATAAAGAAATGC+AGG | 0.480477 | 5.3:-6626824 | MS.gene54622:intron |
| GCAAGTATACGTAGAGAGAA+TGG | 0.483469 | 5.3:-6627188 | MS.gene54622:CDS |
| ACCCTAATATCCACCACATC+CGG | 0.483836 | 5.3:+6630544 | None:intergenic |
| CCACAATTCCTTCTTCTGAC+GGG | 0.485112 | 5.3:+6625861 | None:intergenic |
| ATGTGAGTCAGGAGCTTGAA+AGG | 0.485830 | 5.3:-6630573 | MS.gene54622:CDS |
| CTCTTCCAGAGTTTCACATC+AGG | 0.496021 | 5.3:-6626566 | MS.gene54622:CDS |
| CACCGACAATGGCATTGTAT+TGG | 0.499306 | 5.3:-6628879 | MS.gene54622:CDS |
| AATTATAGGGCCATAATGGA+TGG | 0.499805 | 5.3:-6625308 | MS.gene54622:CDS |
| CTGTAGACGATGCAGTTCTT+CGG | 0.500641 | 5.3:-6627451 | MS.gene54622:CDS |
| CTCACATAAACCTGAAATCT+CGG | 0.502105 | 5.3:+6630589 | None:intergenic |
| CGACAATGGCATTGTATTGG+TGG | 0.503087 | 5.3:-6628876 | MS.gene54622:CDS |
| TTAAGAATCCCAAAACCCTT+AGG | 0.504091 | 5.3:+6627830 | None:intergenic |
| CCTGATGCCATGGCAAGAGA+TGG | 0.505249 | 5.3:-6627416 | MS.gene54622:CDS |
| AGACCAGATTATACGTAGCC+GGG | 0.510695 | 5.3:+6625973 | None:intergenic |
| GAGTAACAATAAGGAGGAAG+TGG | 0.511062 | 5.3:-6627579 | MS.gene54622:CDS |
| GGTTGATGTGGAGGATTTGA+CGG | 0.512007 | 5.3:-6630434 | MS.gene54622:CDS |
| TGAAAGGGATCCACCGGATG+TGG | 0.516823 | 5.3:-6630557 | MS.gene54622:CDS |
| TAGAGCCATCAATAATGATT+GGG | 0.519009 | 5.3:+6627609 | None:intergenic |
| ACACGCAAGACCTTCCACTT+TGG | 0.519257 | 5.3:+6629205 | None:intergenic |
| AACTGGCGGCATCAATAAGC+AGG | 0.520303 | 5.3:-6627771 | MS.gene54622:CDS |
| GTGGGTGTCCCGTCAGAAGA+AGG | 0.521697 | 5.3:-6625869 | MS.gene54622:CDS |
| AGTATTTAAATCTGAATCTA+GGG | 0.523014 | 5.3:+6626885 | None:intergenic |
| GACGAATAAGGTTGATGTGG+AGG | 0.525666 | 5.3:-6630443 | MS.gene54622:CDS |
| GGAGTCACTCCCATATCCCT+TGG | 0.526144 | 5.3:-6627806 | MS.gene54622:CDS |
| TCACCAACTTCAAGGGTCAC+TGG | 0.527041 | 5.3:+6626638 | None:intergenic |
| TATCATCTTGTGAGGTCAGA+TGG | 0.528309 | 5.3:-6629570 | MS.gene54622:CDS |
| TATTCTTGAAGAGGTAGAGG+AGG | 0.530461 | 5.3:-6628954 | MS.gene54622:CDS |
| TCAGGTCATTGTGGACATGC+GGG | 0.534537 | 5.3:-6626714 | MS.gene54622:intron |
| AACTCAATAACCAGAAAAGC+AGG | 0.535534 | 5.3:-6626856 | MS.gene54622:CDS |
| TGTGAGTCAGGAGCTTGAAA+GGG | 0.539494 | 5.3:-6630572 | MS.gene54622:CDS |
| GATTTGGGTGGACATGTTCG+TGG | 0.540278 | 5.3:-6627665 | MS.gene54622:CDS |
| GCCTCAACCAGTTCAAATCA+TGG | 0.540311 | 5.3:-6629259 | MS.gene54622:CDS |
| CCTATCACCATTAATTTGCG+TGG | 0.542199 | 5.3:-6626609 | MS.gene54622:CDS |
| GGTAGAGGAGGAAAGACGAA+AGG | 0.544326 | 5.3:-6628942 | MS.gene54622:CDS |
| TGAAACAAAAGCAATGAGAG+TGG | 0.545369 | 5.3:-6625888 | MS.gene54622:CDS |
| TGGCTTCCCATCTCTTGCCA+TGG | 0.545402 | 5.3:+6627409 | None:intergenic |
| GGCTTTAATATGTCCAGTAT+AGG | 0.545948 | 5.3:+6627347 | None:intergenic |
| ATTCCAGTGACCCTTGAAGT+TGG | 0.548185 | 5.3:-6626641 | MS.gene54622:CDS |
| TGCAACATTTCAGGTCATTG+TGG | 0.552950 | 5.3:-6626723 | MS.gene54622:intron |
| TTTGATGAAGAATATTTGGA+AGG | 0.555720 | 5.3:+6626678 | None:intergenic |
| ACCGGGCCATTGTTTCCACC+TGG | 0.558185 | 5.3:+6626531 | None:intergenic |
| GATAATGAAGACACTGAAGA+AGG | 0.559010 | 5.3:-6629489 | MS.gene54622:intron |
| CTGATGCCATGGCAAGAGAT+GGG | 0.559494 | 5.3:-6627415 | MS.gene54622:CDS |
| TTCAGGTCATTGTGGACATG+CGG | 0.559800 | 5.3:-6626715 | MS.gene54622:intron |
| CACATCATCACCAATATCAC+TGG | 0.561268 | 5.3:+6626045 | None:intergenic |
| AAAAGCAGGTGGGAGAAAAG+AGG | 0.563035 | 5.3:-6626842 | MS.gene54622:CDS |
| GAGGAGGAAAGACGAAAGGA+AGG | 0.565647 | 5.3:-6628938 | MS.gene54622:CDS |
| AAATTACAACACATCGGCTG+TGG | 0.565719 | 5.3:-6625366 | MS.gene54622:CDS |
| GACGACCTGATGTGAAACTC+TGG | 0.566044 | 5.3:+6626561 | None:intergenic |
| GAGACCAGATTATACGTAGC+CGG | 0.566434 | 5.3:+6625972 | None:intergenic |
| GGCCCGGTATTATAAAATAC+CGG | 0.566778 | 5.3:-6626516 | MS.gene54622:CDS |
| TATAGGCTGATCACTTTCAA+GGG | 0.569642 | 5.3:+6627364 | None:intergenic |
| GATATAGTCACCAACTTCAA+GGG | 0.570342 | 5.3:+6626631 | None:intergenic |
| AGAGAAGAAGTGTTGGCTGA+AGG | 0.570892 | 5.3:-6628908 | MS.gene54622:CDS |
| GATGATGATTCCAATTGACC+AGG | 0.572392 | 5.3:-6627132 | MS.gene54622:intron |
| GGAGCTTGAAAGGGATCCAC+CGG | 0.572541 | 5.3:-6630563 | MS.gene54622:CDS |
| TTCTGTTTGGATATTTGCAG+AGG | 0.573410 | 5.3:-6629631 | MS.gene54622:CDS |
| GCATACCTTTCCTGATGCCA+TGG | 0.573742 | 5.3:-6627426 | MS.gene54622:CDS |
| TACCGAGGTTCAGAAGTTTG+AGG | 0.573827 | 5.3:-6627210 | MS.gene54622:CDS |
| GCCATGATTTGAACTGGTTG+AGG | 0.578463 | 5.3:+6629258 | None:intergenic |
| TTACAAAGGTCATGTCTGGA+TGG | 0.580235 | 5.3:+6627306 | None:intergenic |
| ACTATAGGATATTCTTGAAG+AGG | 0.580708 | 5.3:-6628963 | MS.gene54622:intron |
| TGGTGGCATGTAAAGATGAA+AGG | 0.582112 | 5.3:-6628859 | MS.gene54622:CDS |
| ATGGTAAACGACAATTATAG+AGG | 0.582858 | 5.3:+6627325 | None:intergenic |
| TCTTGCCATGGCATCAGGAA+AGG | 0.583375 | 5.3:+6627421 | None:intergenic |
| CCGATGACGAAGTATATGGT+GGG | 0.586824 | 5.3:-6630520 | MS.gene54622:CDS |
| GGAAGAAGCACCAAAGTGGA+AGG | 0.587130 | 5.3:-6629215 | MS.gene54622:CDS |
| GTCCACCCAAATCAGACTGA+GGG | 0.588033 | 5.3:+6627675 | None:intergenic |
| AGCATCTAGAAAGTCTCTAA+GGG | 0.590263 | 5.3:+6625205 | None:intergenic |
| GAAGACGAATAAGGTTGATG+TGG | 0.590987 | 5.3:-6630446 | MS.gene54622:CDS |
| AGCACTAGTTTCACCCATGT+GGG | 0.591717 | 5.3:+6627517 | None:intergenic |
| TTGCTTGCCTCACAACAAAG+TGG | 0.595258 | 5.3:+6625175 | None:intergenic |
| TGCTTGCCTCACAACAAAGT+GGG | 0.596550 | 5.3:+6625176 | None:intergenic |
| AGTTTCTGTATTCTGTCCAA+GGG | 0.598717 | 5.3:+6627790 | None:intergenic |
| TGAGATTGTGAGGAGACAGT+TGG | 0.601412 | 5.3:-6630383 | MS.gene54622:CDS |
| AAGGGATCCACCGGATGTGG+TGG | 0.603412 | 5.3:-6630554 | MS.gene54622:CDS |
| CAGCACTAGTTTCACCCATG+TGG | 0.605173 | 5.3:+6627516 | None:intergenic |
| AAATATCCCACTTTGTTGTG+AGG | 0.605641 | 5.3:-6625182 | None:intergenic |
| TCCGATGACGAAGTATATGG+TGG | 0.605903 | 5.3:-6630521 | MS.gene54622:CDS |
| CCCACCATATACTTCGTCAT+CGG | 0.606972 | 5.3:+6630520 | None:intergenic |
| TTTCTGATCTTAAGACGTTG+AGG | 0.607391 | 5.3:-6630318 | MS.gene54622:CDS |
| AGTCGTTTGATGAGATTGTG+AGG | 0.607565 | 5.3:-6630393 | MS.gene54622:CDS |
| ACCAGGTGGAAACAATGGCC+CGG | 0.608400 | 5.3:-6626532 | MS.gene54622:CDS |
| ATTATAGGGCCATAATGGAT+GGG | 0.608748 | 5.3:-6625307 | MS.gene54622:CDS |
| GAAAACTCAATCAAGAGCAC+CGG | 0.619468 | 5.3:+6626497 | None:intergenic |
| TTTGGATACACTCAGAGTGT+CGG | 0.621133 | 5.3:-6629664 | MS.gene54622:CDS |
| GAAACAAAAGCAATGAGAGT+GGG | 0.625806 | 5.3:-6625887 | MS.gene54622:CDS |
| ATACAACCAGGTGGAAACAA+TGG | 0.625836 | 5.3:-6626537 | MS.gene54622:CDS |
| AACGTGTTTATCATCTTGTG+AGG | 0.628573 | 5.3:-6629578 | MS.gene54622:CDS |
| CGATGACGAAGTATATGGTG+GGG | 0.628683 | 5.3:-6630519 | MS.gene54622:CDS |
| TGCCTCAAACTTCTGAACCT+CGG | 0.633949 | 5.3:+6627208 | None:intergenic |
| TGGTAAACGACAATTATAGA+GGG | 0.634773 | 5.3:+6627326 | None:intergenic |
| ACCCCTCAGTCTGATTTGGG+TGG | 0.635198 | 5.3:-6627677 | MS.gene54622:CDS |
| GATTCAGAAAGCGATTGTTG+AGG | 0.636549 | 5.3:-6630497 | MS.gene54622:CDS |
| TCTTGGAAGAAGCACCAAAG+TGG | 0.638664 | 5.3:-6629219 | MS.gene54622:CDS |
| AAGAAGCCAAAGGATCCTAA+GGG | 0.640306 | 5.3:-6627845 | MS.gene54622:CDS |
| CATGTTGAGAGAAGAAGTGT+TGG | 0.640935 | 5.3:-6628915 | MS.gene54622:CDS |
| TGTTCAGAGTAACAATAAGG+AGG | 0.640959 | 5.3:-6627585 | MS.gene54622:CDS |
| CTTCGCAAAACCAGAAACCA+TGG | 0.646037 | 5.3:+6630660 | None:intergenic |
| CTAATATCCACCACATCCGG+TGG | 0.646959 | 5.3:+6630547 | None:intergenic |
| ATCAGGTCGTCTATACAACC+AGG | 0.647266 | 5.3:-6626549 | MS.gene54622:CDS |
| AAGTGGCAAGTGGTAAAACT+GGG | 0.647794 | 5.3:-6627562 | MS.gene54622:CDS |
| GACCAGATTATACGTAGCCG+GGG | 0.655756 | 5.3:+6625974 | None:intergenic |
| TAGACGATGCAGTTCTTCGG+AGG | 0.657142 | 5.3:-6627448 | MS.gene54622:CDS |
| TGATGTGGAGGATTTGACGG+TGG | 0.658243 | 5.3:-6630431 | MS.gene54622:CDS |
| AATAAGGAGGAAGTGGCAAG+TGG | 0.663909 | 5.3:-6627572 | MS.gene54622:CDS |
| TAATTAGAATCTGTAACACC+AGG | 0.663930 | 5.3:+6625326 | None:intergenic |
| TCAATAACCAGAAAAGCAGG+TGG | 0.667123 | 5.3:-6626853 | MS.gene54622:CDS |
| GAGTTTGTGAAACCAAACAC+GGG | 0.667217 | 5.3:-6627481 | MS.gene54622:CDS |
| TTTCTATGAAGATTCTACCG+AGG | 0.670018 | 5.3:-6627225 | MS.gene54622:CDS |
| GAAGGTGAAGACACCGACAA+TGG | 0.670311 | 5.3:-6628890 | MS.gene54622:CDS |
| GGCTGAAAATTACAACACAT+CGG | 0.677724 | 5.3:-6625372 | MS.gene54622:CDS |
| AGAGTTTGTGAAACCAAACA+CGG | 0.679375 | 5.3:-6627482 | MS.gene54622:CDS |
| CAATAACCAGAAAAGCAGGT+GGG | 0.683805 | 5.3:-6626852 | MS.gene54622:CDS |
| TGTCCACCCAAATCAGACTG+AGG | 0.686132 | 5.3:+6627674 | None:intergenic |
| CCCGTCAGAAGAAGGAATTG+TGG | 0.696840 | 5.3:-6625861 | MS.gene54622:CDS |
| TCCACCCAAATCAGACTGAG+GGG | 0.701752 | 5.3:+6627676 | None:intergenic |
| ATGCGTGTTTGAAAGAGATG+AGG | 0.714587 | 5.3:-6630468 | MS.gene54622:CDS |
| GAATTGTGGAAAGTGACGTG+AGG | 0.720586 | 5.3:-6625847 | MS.gene54622:intron |
| AAGCTAGCTGAAATAATGGG+CGG | 0.723580 | 5.3:-6625245 | MS.gene54622:CDS |
| GAAAAGGCAAGAGAAAATTG+GGG | 0.723707 | 5.3:-6627643 | MS.gene54622:CDS |
| GGACAGAATACAGAAACTGG+CGG | 0.724595 | 5.3:-6627785 | MS.gene54622:CDS |
| AGGTCGTCTATACAACCAGG+TGG | 0.725762 | 5.3:-6626546 | MS.gene54622:CDS |
| AGTTTGTGAAACCAAACACG+GGG | 0.728405 | 5.3:-6627480 | MS.gene54622:CDS |
| TTTGTGAAACCAAACACGGG+GGG | 0.756170 | 5.3:-6627478 | MS.gene54622:CDS |
| GTTTGTGAAACCAAACACGG+GGG | 0.775210 | 5.3:-6627479 | MS.gene54622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCATTTAAAAAAATAAAAG+AGG | - | chr5.3:6626460-6626479 | MS.gene54622:intron | 15.0% |
| !! | TTATGTCTTCTTATAAAATA+AGG | - | chr5.3:6627062-6627081 | MS.gene54622:intron | 15.0% |
| !!! | CTTTGAAATATTATAAATCT+GGG | - | chr5.3:6627237-6627256 | MS.gene54622:CDS | 15.0% |
| !!! | TAGTTTAATTTGATAAATGT+TGG | - | chr5.3:6626823-6626842 | MS.gene54622:intron | 15.0% |
| !!! | TCTTTGAAATATTATAAATC+TGG | - | chr5.3:6627236-6627255 | MS.gene54622:CDS | 15.0% |
| !!! | TTCTTAGTTTTATATTTCTA+AGG | - | chr5.3:6630029-6630048 | MS.gene54622:intron | 15.0% |
| !!! | TTTGAAATATTATAAATCTG+GGG | - | chr5.3:6627238-6627257 | MS.gene54622:CDS | 15.0% |
| !! | AACTTTGATATAATGCTATT+GGG | + | chr5.3:6629826-6629845 | None:intergenic | 20.0% |
| !! | AATCAAAAAGAAAAACATGA+GGG | + | chr5.3:6628757-6628776 | None:intergenic | 20.0% |
| !! | AGTATTTAAATCTGAATCTA+GGG | + | chr5.3:6628960-6628979 | None:intergenic | 20.0% |
| !! | CAAATTAGTACTAAATATCT+GGG | - | chr5.3:6629535-6629554 | MS.gene54622:CDS | 20.0% |
| !! | CTAACTAAAAAATACATGTT+TGG | + | chr5.3:6626043-6626062 | None:intergenic | 20.0% |
| !! | GTCAAAAACAAAAAGAAAAA+AGG | - | chr5.3:6626323-6626342 | MS.gene54622:intron | 20.0% |
| !! | TAGTATTTAAATCTGAATCT+AGG | + | chr5.3:6628961-6628980 | None:intergenic | 20.0% |
| !! | TGTTACAGATTCTAATTATA+GGG | - | chr5.3:6630521-6630540 | MS.gene54622:CDS | 20.0% |
| !!! | AAAAAATAAAAGAGGCATAA+AGG | - | chr5.3:6626468-6626487 | MS.gene54622:intron | 20.0% |
| !!! | CTATTGTTTTTTTATTGTGA+AGG | - | chr5.3:6627906-6627925 | MS.gene54622:CDS | 20.0% |
| !!! | CTCTAATTTTATGAAATTTG+TGG | - | chr5.3:6627478-6627497 | MS.gene54622:CDS | 20.0% |
| !!! | TAAAAAAAGACAACCTTTTT+TGG | + | chr5.3:6627045-6627064 | None:intergenic | 20.0% |
| !!! | TACAGGCTTTATATAATTTT+AGG | - | chr5.3:6630235-6630254 | MS.gene54622:intron | 20.0% |
| !!! | TACTTTTTTTGTGATTATGA+TGG | - | chr5.3:6627797-6627816 | MS.gene54622:CDS | 20.0% |
| !!! | TATCATCGTTTTATTTGATT+TGG | - | chr5.3:6626696-6626715 | MS.gene54622:CDS | 20.0% |
| !!! | TGAATTAGCTTATTGAAAAA+TGG | - | chr5.3:6625990-6626009 | MS.gene54622:CDS | 20.0% |
| !!! | TGATAAATGTTGGATATTTT+GGG | - | chr5.3:6626833-6626852 | MS.gene54622:CDS | 20.0% |
| !!! | TTGATAAATGTTGGATATTT+TGG | - | chr5.3:6626832-6626851 | MS.gene54622:CDS | 20.0% |
| ! | AACAAAAAGAAAAAAGGCAA+AGG | - | chr5.3:6626329-6626348 | MS.gene54622:intron | 25.0% |
| ! | AAGCATGCAAAACAAAATTA+AGG | + | chr5.3:6626543-6626562 | None:intergenic | 25.0% |
| ! | ACAAAAAGAAAAAAGGCAAA+GGG | - | chr5.3:6626330-6626349 | MS.gene54622:intron | 25.0% |
| ! | ATTGTAATTGCAAGAAACAT+TGG | - | chr5.3:6630109-6630128 | MS.gene54622:intron | 25.0% |
| ! | ATTTGTGGATACATATAATC+TGG | - | chr5.3:6627493-6627512 | MS.gene54622:CDS | 25.0% |
| ! | CAAAGTGGAAATAACATAAT+GGG | - | chr5.3:6627442-6627461 | MS.gene54622:CDS | 25.0% |
| ! | CAACTTTGATATAATGCTAT+TGG | + | chr5.3:6629827-6629846 | None:intergenic | 25.0% |
| ! | CCAAATATTCTTCATCAAAA+GGG | - | chr5.3:6629168-6629187 | MS.gene54622:intron | 25.0% |
| ! | CCAAATTAGTACTAAATATC+TGG | - | chr5.3:6629534-6629553 | MS.gene54622:CDS | 25.0% |
| ! | CCAGATATTTAGTACTAATT+TGG | + | chr5.3:6629537-6629556 | None:intergenic | 25.0% |
| ! | GAATCAAAAAGAAAAACATG+AGG | + | chr5.3:6628758-6628777 | None:intergenic | 25.0% |
| ! | GAGAAAAATCATAAGCTATA+AGG | - | chr5.3:6625949-6625968 | MS.gene54622:CDS | 25.0% |
| ! | GTGTTACAGATTCTAATTAT+AGG | - | chr5.3:6630520-6630539 | MS.gene54622:CDS | 25.0% |
| ! | TCAAAGTGGAAATAACATAA+TGG | - | chr5.3:6627441-6627460 | MS.gene54622:CDS | 25.0% |
| ! | TCCAAATATTCTTCATCAAA+AGG | - | chr5.3:6629167-6629186 | MS.gene54622:intron | 25.0% |
| ! | TGAAATATTTGCTTCACTAA+AGG | - | chr5.3:6629912-6629931 | MS.gene54622:intron | 25.0% |
| ! | TGATTTGATCATATCACTAT+AGG | - | chr5.3:6626864-6626883 | MS.gene54622:CDS | 25.0% |
| ! | TGTAAGATGAAAGTTAGTAT+AGG | + | chr5.3:6628862-6628881 | None:intergenic | 25.0% |
| ! | TTAACCCCAAAATTTACATT+AGG | + | chr5.3:6630436-6630455 | None:intergenic | 25.0% |
| ! | TTCTTCAATTAAGAGAACAA+GGG | - | chr5.3:6625915-6625934 | MS.gene54622:CDS | 25.0% |
| ! | TTTCTTCAATTAAGAGAACA+AGG | - | chr5.3:6625914-6625933 | MS.gene54622:CDS | 25.0% |
| ! | TTTGATGAAGAATATTTGGA+AGG | + | chr5.3:6629167-6629186 | None:intergenic | 25.0% |
| !! | ACTCATTCGTTCAATTTTAT+TGG | - | chr5.3:6627583-6627602 | MS.gene54622:CDS | 25.0% |
| !! | ACTTATCGTTATGTTTTCTT+TGG | - | chr5.3:6626381-6626400 | MS.gene54622:intron | 25.0% |
| !! | CTGTTCCTAATGTAAATTTT+GGG | - | chr5.3:6630428-6630447 | MS.gene54622:CDS | 25.0% |
| !! | TATACCTTTAACCTTTTAGA+GGG | + | chr5.3:6628591-6628610 | None:intergenic | 25.0% |
| !! | TCTGTTCCTAATGTAAATTT+TGG | - | chr5.3:6630427-6630446 | MS.gene54622:CDS | 25.0% |
| !! | TGTTCCTAATGTAAATTTTG+GGG | - | chr5.3:6630429-6630448 | MS.gene54622:CDS | 25.0% |
| !! | TTCCTATTCTAGAAAGTATA+TGG | - | chr5.3:6626671-6626690 | MS.gene54622:CDS | 25.0% |
| !! | TTCGTTTGGATTTTCAAAAT+AGG | - | chr5.3:6626774-6626793 | MS.gene54622:intron | 25.0% |
| !!! | CAACAAATATTGATTTGTAC+AGG | - | chr5.3:6630218-6630237 | MS.gene54622:intron | 25.0% |
| !!! | CATGTTTTTCTTTTTGATTC+TGG | - | chr5.3:6628758-6628777 | MS.gene54622:intron | 25.0% |
| AATTTGGACCAAAACAGTAA+CGG | + | chr5.3:6629521-6629540 | None:intergenic | 30.0% | |
| ACTATAGGATATTCTTGAAG+AGG | - | chr5.3:6626879-6626898 | MS.gene54622:CDS | 30.0% | |
| AGAAAAGCTAGCTGAAATAA+TGG | - | chr5.3:6630593-6630612 | MS.gene54622:CDS | 30.0% | |
| AGAAAATTGGGGAATAGAAA+TGG | - | chr5.3:6628210-6628229 | MS.gene54622:intron | 30.0% | |
| ATAGAGAATTTCGTAGACTA+GGG | - | chr5.3:6625710-6625729 | MS.gene54622:intron | 30.0% | |
| ATCAGTGCTCATGATAAAAA+AGG | + | chr5.3:6626107-6626126 | None:intergenic | 30.0% | |
| ATCCAATTTGGCATACTTTA+GGG | - | chr5.3:6625482-6625501 | MS.gene54622:intron | 30.0% | |
| ATGGTAAACGACAATTATAG+AGG | + | chr5.3:6628520-6628539 | None:intergenic | 30.0% | |
| CAAAAAGAAAAAAGGCAAAG+GGG | - | chr5.3:6626331-6626350 | MS.gene54622:intron | 30.0% | |
| CAAACAAGCTATATCATACA+TGG | - | chr5.3:6629686-6629705 | MS.gene54622:CDS | 30.0% | |
| CAACTATAGTAAAACAAACC+TGG | + | chr5.3:6628731-6628750 | None:intergenic | 30.0% | |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr5.3:6625820-6625839 | MS.gene54622:intron | 30.0% | |
| CTTTGTAGTTCTTTGTATTG+TGG | - | chr5.3:6625653-6625672 | MS.gene54622:intron | 30.0% | |
| GAAAAGCTAGCTGAAATAAT+GGG | - | chr5.3:6630594-6630613 | MS.gene54622:CDS | 30.0% | |
| GAAATATTCTTGTTGAGACA+TGG | + | chr5.3:6630285-6630304 | None:intergenic | 30.0% | |
| GGTGACTTACTTGAAATATT+TGG | - | chr5.3:6626160-6626179 | MS.gene54622:intron | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+CGG | - | chr5.3:6625832-6625851 | MS.gene54622:intron | 30.0% | |
| TAATTAGAATCTGTAACACC+AGG | + | chr5.3:6630519-6630538 | None:intergenic | 30.0% | |
| TAGAGCCATCAATAATGATT+GGG | + | chr5.3:6628236-6628255 | None:intergenic | 30.0% | |
| TAGTGTTCAGAGTAACAATA+AGG | - | chr5.3:6628254-6628273 | MS.gene54622:intron | 30.0% | |
| TATAGAGAATTTCGTAGACT+AGG | - | chr5.3:6625709-6625728 | MS.gene54622:intron | 30.0% | |
| TCAAAAAATAAAGCCCACAT+GGG | - | chr5.3:6628312-6628331 | MS.gene54622:intron | 30.0% | |
| TCAGTGCTCATGATAAAAAA+GGG | + | chr5.3:6626106-6626125 | None:intergenic | 30.0% | |
| TGGTAAACGACAATTATAGA+GGG | + | chr5.3:6628519-6628538 | None:intergenic | 30.0% | |
| TGGTGAAAAATAACAGATAG+CGG | - | chr5.3:6625740-6625759 | MS.gene54622:intron | 30.0% | |
| TTCAAAAAATAAAGCCCACA+TGG | - | chr5.3:6628311-6628330 | MS.gene54622:intron | 30.0% | |
| TTCAAATCATGGCATAGTAT+TGG | - | chr5.3:6626594-6626613 | MS.gene54622:CDS | 30.0% | |
| TTCCCAAACTATAAAATCCA+TGG | + | chr5.3:6629098-6629117 | None:intergenic | 30.0% | |
| TTCTAATTATAGGGCCATAA+TGG | - | chr5.3:6630530-6630549 | MS.gene54622:CDS | 30.0% | |
| ! | AAGATATCAGCTATTGATTG+CGG | - | chr5.3:6626073-6626092 | MS.gene54622:intron | 30.0% |
| ! | ATAAAAGAGGCATAAAGGAA+AGG | - | chr5.3:6626473-6626492 | MS.gene54622:CDS | 30.0% |
| ! | CCCTTTTGATGAAGAATATT+TGG | + | chr5.3:6629171-6629190 | None:intergenic | 30.0% |
| ! | GATGGCAATTTTGGATAATA+AGG | - | chr5.3:6627287-6627306 | MS.gene54622:CDS | 30.0% |
| ! | GTATACCTTTAACCTTTTAG+AGG | + | chr5.3:6628592-6628611 | None:intergenic | 30.0% |
| ! | TACTGTCTTGTTACTATCAA+TGG | - | chr5.3:6629429-6629448 | MS.gene54622:intron | 30.0% |
| ! | TCAATTTTATTGGCAGTGAT+TGG | - | chr5.3:6627593-6627612 | MS.gene54622:CDS | 30.0% |
| ! | TGCCATGGATTTTATAGTTT+GGG | - | chr5.3:6629093-6629112 | MS.gene54622:intron | 30.0% |
| ! | TTGCCATGGATTTTATAGTT+TGG | - | chr5.3:6629092-6629111 | MS.gene54622:intron | 30.0% |
| ! | TTGTTTTCCTCTTTTCTGAT+TGG | - | chr5.3:6628882-6628901 | MS.gene54622:CDS | 30.0% |
| ! | TTTTACTGATAGGTATGATG+CGG | - | chr5.3:6626139-6626158 | MS.gene54622:intron | 30.0% |
| ! | TTTTCAGCATAGAATTCGTT+AGG | + | chr5.3:6627186-6627205 | None:intergenic | 30.0% |
| !! | ACTGCACTGATTAAATAATC+CGG | + | chr5.3:6627106-6627125 | None:intergenic | 30.0% |
| !! | AGAATTCGTTAGGATTAGTT+TGG | + | chr5.3:6627176-6627195 | None:intergenic | 30.0% |
| !! | AGCCATATACTTTCTAGAAT+AGG | + | chr5.3:6626676-6626695 | None:intergenic | 30.0% |
| !!! | CTTGATTAGCATTTGTTTTG+TGG | - | chr5.3:6629728-6629747 | MS.gene54622:intron | 30.0% |
| !!! | GTGGGCTTTATTTTTTGAAT+CGG | + | chr5.3:6628310-6628329 | None:intergenic | 30.0% |
| !!! | TAATGCTTTTCTAGTTCGTT+TGG | - | chr5.3:6626760-6626779 | MS.gene54622:intron | 30.0% |
| !!! | TTGTGTGGTTTTTTACTGAT+AGG | - | chr5.3:6626129-6626148 | MS.gene54622:intron | 30.0% |
| !!! | TTTTCTGGTTATTGAGTTCT+GGG | + | chr5.3:6628984-6629003 | None:intergenic | 30.0% |
| AAATCCATGGCAAGTATATG+AGG | + | chr5.3:6629085-6629104 | None:intergenic | 35.0% | |
| AACGTGTTTATCATCTTGTG+AGG | - | chr5.3:6626264-6626283 | MS.gene54622:intron | 35.0% | |
| AACTCAATAACCAGAAAAGC+AGG | - | chr5.3:6628986-6629005 | MS.gene54622:intron | 35.0% | |
| AATGGATGGGTGTAAAAGTT+TGG | - | chr5.3:6630548-6630567 | MS.gene54622:CDS | 35.0% | |
| AATGGCCCAATCATTATTGA+TGG | - | chr5.3:6628228-6628247 | MS.gene54622:intron | 35.0% | |
| ACATTTAAACTGTAGAGCTC+AGG | - | chr5.3:6630347-6630366 | MS.gene54622:CDS | 35.0% | |
| ACCATGGATTCTATTCAAAG+TGG | - | chr5.3:6627427-6627446 | MS.gene54622:CDS | 35.0% | |
| ACGGCAAGCATTCTTATAAA+TGG | + | chr5.3:6629502-6629521 | None:intergenic | 35.0% | |
| AGAGTTTGTGAAACCAAACA+CGG | - | chr5.3:6628360-6628379 | MS.gene54622:intron | 35.0% | |
| AGCAGTGATTGACTGAATAT+TGG | - | chr5.3:6627558-6627577 | MS.gene54622:CDS | 35.0% | |
| AGCATCTAGAAAGTCTCTAA+GGG | + | chr5.3:6630640-6630659 | None:intergenic | 35.0% | |
| AGTTGTTGGATTATCTAGTC+AGG | - | chr5.3:6625548-6625567 | MS.gene54622:intron | 35.0% | |
| AGTTTCTGTATTCTGTCCAA+GGG | + | chr5.3:6628055-6628074 | None:intergenic | 35.0% | |
| ATAAGCTCGTGAGAAAATGA+CGG | - | chr5.3:6626014-6626033 | MS.gene54622:CDS | 35.0% | |
| ATGCAAGACAGACACTAATT+TGG | - | chr5.3:6626720-6626739 | MS.gene54622:intron | 35.0% | |
| CCATTATCCACATTCCTATA+CGG | + | chr5.3:6628822-6628841 | None:intergenic | 35.0% | |
| CGGCAAGCATTCTTATAAAT+GGG | + | chr5.3:6629501-6629520 | None:intergenic | 35.0% | |
| CGTATAGGAATGTGGATAAT+GGG | - | chr5.3:6628820-6628839 | MS.gene54622:CDS | 35.0% | |
| CTAGAGCCATCAATAATGAT+TGG | + | chr5.3:6628237-6628256 | None:intergenic | 35.0% | |
| CTCACATAAACCTGAAATCT+CGG | + | chr5.3:6625256-6625275 | None:intergenic | 35.0% | |
| CTGATATGTGATGATTACCA+TGG | - | chr5.3:6627411-6627430 | MS.gene54622:CDS | 35.0% | |
| CTTTGTATTGTGGAGAATCA+CGG | - | chr5.3:6625663-6625682 | MS.gene54622:intron | 35.0% | |
| GAAAAGGCAAGAGAAAATTG+GGG | - | chr5.3:6628199-6628218 | MS.gene54622:intron | 35.0% | |
| GAAACAAAAGCAATGAGAGT+GGG | - | chr5.3:6629955-6629974 | MS.gene54622:intron | 35.0% | |
| GAATGACATTTGATCTGTCA+TGG | - | chr5.3:6629757-6629776 | MS.gene54622:intron | 35.0% | |
| GACTTCGATTTCTCTTACAA+AGG | + | chr5.3:6628553-6628572 | None:intergenic | 35.0% | |
| GATAATGAAGACACTGAAGA+AGG | - | chr5.3:6626353-6626372 | MS.gene54622:intron | 35.0% | |
| GATATAGTCACCAACTTCAA+GGG | + | chr5.3:6629214-6629233 | None:intergenic | 35.0% | |
| GATCCAATTTGGCATACTTT+AGG | - | chr5.3:6625481-6625500 | MS.gene54622:intron | 35.0% | |
| GCATAAGAAAAAGAAGCCAA+AGG | - | chr5.3:6627987-6628006 | MS.gene54622:intron | 35.0% | |
| GCTTATAGCAGACTAACTTA+TGG | - | chr5.3:6625771-6625790 | MS.gene54622:intron | 35.0% | |
| GGAAAAGGCAAGAGAAAATT+GGG | - | chr5.3:6628198-6628217 | MS.gene54622:intron | 35.0% | |
| GGCTGAAAATTACAACACAT+CGG | - | chr5.3:6630470-6630489 | MS.gene54622:CDS | 35.0% | |
| GGTTACGGAAGTTACATTTA+TGG | - | chr5.3:6625230-6625249 | MS.gene54622:CDS | 35.0% | |
| GTAAAACAAACCTGGTCAAT+TGG | + | chr5.3:6628723-6628742 | None:intergenic | 35.0% | |
| GTAATTGCAAGAAACATTGG+TGG | - | chr5.3:6630112-6630131 | MS.gene54622:intron | 35.0% | |
| TACTATGCCATGATTTGAAC+TGG | + | chr5.3:6626593-6626612 | None:intergenic | 35.0% | |
| TAGCATCTAGAAAGTCTCTA+AGG | + | chr5.3:6630641-6630660 | None:intergenic | 35.0% | |
| TATAGGCTGATCACTTTCAA+GGG | + | chr5.3:6628481-6628500 | None:intergenic | 35.0% | |
| TATCAACCAGCAAAAACTCA+AGG | + | chr5.3:6627842-6627861 | None:intergenic | 35.0% | |
| TATGGAATATGCATCGTTGA+TGG | - | chr5.3:6627269-6627288 | MS.gene54622:CDS | 35.0% | |
| TCCACTTTGAATAGAATCCA+TGG | + | chr5.3:6627431-6627450 | None:intergenic | 35.0% | |
| TGAAACAAAAGCAATGAGAG+TGG | - | chr5.3:6629954-6629973 | MS.gene54622:intron | 35.0% | |
| TGAAACCTGTGCATATTGAT+AGG | + | chr5.3:6630312-6630331 | None:intergenic | 35.0% | |
| TGAAGGTCATTCAAGATGAA+TGG | - | chr5.3:6627923-6627942 | MS.gene54622:intron | 35.0% | |
| TGACTGTAGTCTATAGCAAA+AGG | - | chr5.3:6627630-6627649 | MS.gene54622:CDS | 35.0% | |
| TGGAAAAGGCAAGAGAAAAT+TGG | - | chr5.3:6628197-6628216 | MS.gene54622:intron | 35.0% | |
| TGTTCAGAGTAACAATAAGG+AGG | - | chr5.3:6628257-6628276 | MS.gene54622:intron | 35.0% | |
| TTAAGAATCCCAAAACCCTT+AGG | + | chr5.3:6628015-6628034 | None:intergenic | 35.0% | |
| TTATGGCAGATAGCTTATAG+CGG | - | chr5.3:6625788-6625807 | MS.gene54622:intron | 35.0% | |
| TTCCCTAAAGTATGCCAAAT+TGG | + | chr5.3:6625487-6625506 | None:intergenic | 35.0% | |
| TTCCTTTCCACGCAAATTAA+TGG | + | chr5.3:6629243-6629262 | None:intergenic | 35.0% | |
| TTCTGTTTGGATATTTGCAG+AGG | - | chr5.3:6626211-6626230 | MS.gene54622:intron | 35.0% | |
| TTTCCATGCTCATGTGATAT+AGG | - | chr5.3:6630179-6630198 | MS.gene54622:intron | 35.0% | |
| TTTCTATGAAGATTCTACCG+AGG | - | chr5.3:6628617-6628636 | MS.gene54622:intron | 35.0% | |
| TTTCTGATCTTAAGACGTTG+AGG | - | chr5.3:6625524-6625543 | MS.gene54622:intron | 35.0% | |
| TTTGGGAATTGCAACATTTC+AGG | - | chr5.3:6629110-6629129 | MS.gene54622:intron | 35.0% | |
| ! | AAATCTGGGGCAAGATATTA+TGG | - | chr5.3:6627251-6627270 | MS.gene54622:CDS | 35.0% |
| ! | AATTATAGGGCCATAATGGA+TGG | - | chr5.3:6630534-6630553 | MS.gene54622:CDS | 35.0% |
| ! | ACTTTTACACCCATCCATTA+TGG | + | chr5.3:6630547-6630566 | None:intergenic | 35.0% |
| ! | CACCGGTATTTTATAATACC+GGG | + | chr5.3:6629331-6629350 | None:intergenic | 35.0% |
| ! | CATAGTATTGGAAGAAGTCT+TGG | - | chr5.3:6626606-6626625 | MS.gene54622:CDS | 35.0% |
| ! | GAATCCCTCTAAAAGGTTAA+AGG | - | chr5.3:6628584-6628603 | MS.gene54622:intron | 35.0% |
| ! | GGCTTTAATATGTCCAGTAT+AGG | + | chr5.3:6628498-6628517 | None:intergenic | 35.0% |
| ! | GTATTTTTCCTGTGAGCTTT+TGG | - | chr5.3:6627358-6627377 | MS.gene54622:CDS | 35.0% |
| ! | GTGCAGTAGTCAATTTTGTA+TGG | - | chr5.3:6627119-6627138 | MS.gene54622:intron | 35.0% |
| ! | TAAAAATGTACTGGTGGTAG+TGG | + | chr5.3:6628456-6628475 | None:intergenic | 35.0% |
| ! | TCAAGGGCATAAAAATGTAC+TGG | + | chr5.3:6628465-6628484 | None:intergenic | 35.0% |
| ! | TTGGTTCTTTAATCTCGCAT+AGG | - | chr5.3:6626400-6626419 | MS.gene54622:intron | 35.0% |
| !! | AAAAGCACCAATCAGAAAAG+AGG | + | chr5.3:6628892-6628911 | None:intergenic | 35.0% |
| !! | AATGGCTTGTTCATATTCTG+GGG | - | chr5.3:6629447-6629466 | MS.gene54622:intron | 35.0% |
| !! | AGAGGTTGATAAAGAAATGC+AGG | - | chr5.3:6629018-6629037 | MS.gene54622:intron | 35.0% |
| !! | ATTATAGGGCCATAATGGAT+GGG | - | chr5.3:6630535-6630554 | MS.gene54622:CDS | 35.0% |
| !! | ATTTCAGGTTTATGTGAGTC+AGG | - | chr5.3:6625258-6625277 | MS.gene54622:CDS | 35.0% |
| !! | CAATGGCTTGTTCATATTCT+GGG | - | chr5.3:6629446-6629465 | MS.gene54622:intron | 35.0% |
| !! | CCAACATGGCTTTAAAACTA+TGG | + | chr5.3:6630148-6630167 | None:intergenic | 35.0% |
| !! | CTCATTGCTTTTGTTTCATC+TGG | + | chr5.3:6629952-6629971 | None:intergenic | 35.0% |
| !! | GCACCGGTATTTTATAATAC+CGG | + | chr5.3:6629332-6629351 | None:intergenic | 35.0% |
| !! | TCAATGGCTTGTTCATATTC+TGG | - | chr5.3:6629445-6629464 | MS.gene54622:intron | 35.0% |
| !! | TTCACTTTTCATTTCACCCT+TGG | + | chr5.3:6630068-6630087 | None:intergenic | 35.0% |
| !!! | AAGGGTTTTGGGATTCTTAA+TGG | - | chr5.3:6628015-6628034 | MS.gene54622:intron | 35.0% |
| !!! | ATTTCAGCTAGCTTTTCTAC+TGG | + | chr5.3:6630591-6630610 | None:intergenic | 35.0% |
| !!! | CCATAGTTTTAAAGCCATGT+TGG | - | chr5.3:6630145-6630164 | MS.gene54622:intron | 35.0% |
| !!! | CTCATCGATGTTTTAACTTG+CGG | - | chr5.3:6625615-6625634 | MS.gene54622:intron | 35.0% |
| !!! | CTTTTCTGGTTATTGAGTTC+TGG | + | chr5.3:6628985-6629004 | None:intergenic | 35.0% |
| !!! | TTTTGTTTTGCATGCTTGTG+TGG | - | chr5.3:6626546-6626565 | MS.gene54622:CDS | 35.0% |
| AAAATAGGATGACCTGAAGC+GGG | - | chr5.3:6626789-6626808 | MS.gene54622:intron | 40.0% | |
| AAACGATACCAAAAGCTCAC+AGG | + | chr5.3:6627369-6627388 | None:intergenic | 40.0% | |
| AAAGAAGCCAAAGGATCCTA+AGG | - | chr5.3:6627996-6628015 | MS.gene54622:intron | 40.0% | |
| AAGAAGCCAAAGGATCCTAA+GGG | - | chr5.3:6627997-6628016 | MS.gene54622:intron | 40.0% | |
| AAGCCTATATCACATGAGCA+TGG | + | chr5.3:6630185-6630204 | None:intergenic | 40.0% | |
| AAGCTGAGAATCCCTCTAAA+AGG | - | chr5.3:6628577-6628596 | MS.gene54622:intron | 40.0% | |
| AAGTGGCAAGTGGTAAAACT+GGG | - | chr5.3:6628280-6628299 | MS.gene54622:intron | 40.0% | |
| ACATTTATGGCCGAGATTTC+AGG | - | chr5.3:6625243-6625262 | MS.gene54622:CDS | 40.0% | |
| AGAGATGAGGAAGACGAATA+AGG | - | chr5.3:6625387-6625406 | MS.gene54622:intron | 40.0% | |
| AGGGCATAAAAATGTACTGG+TGG | + | chr5.3:6628462-6628481 | None:intergenic | 40.0% | |
| AGTACTAAATATCTGGGCAC+TGG | - | chr5.3:6629541-6629560 | MS.gene54622:CDS | 40.0% | |
| AGTCGTTTGATGAGATTGTG+AGG | - | chr5.3:6625449-6625468 | MS.gene54622:intron | 40.0% | |
| AGTTTGTGAAACCAAACACG+GGG | - | chr5.3:6628362-6628381 | MS.gene54622:intron | 40.0% | |
| ATACAACCAGGTGGAAACAA+TGG | - | chr5.3:6629305-6629324 | MS.gene54622:intron | 40.0% | |
| ATGCGTGTTTGAAAGAGATG+AGG | - | chr5.3:6625374-6625393 | MS.gene54622:CDS | 40.0% | |
| CAAAATAGGATGACCTGAAG+CGG | - | chr5.3:6626788-6626807 | MS.gene54622:intron | 40.0% | |
| CAATAACCAGAAAAGCAGGT+GGG | - | chr5.3:6628990-6629009 | MS.gene54622:intron | 40.0% | |
| CACATCATCACCAATATCAC+TGG | + | chr5.3:6629800-6629819 | None:intergenic | 40.0% | |
| CACCAATACAATGCCATTGT+CGG | + | chr5.3:6626968-6626987 | None:intergenic | 40.0% | |
| CAGTTTCTGTATTCTGTCCA+AGG | + | chr5.3:6628056-6628075 | None:intergenic | 40.0% | |
| CATCACCAACAGTCCAAAAA+AGG | - | chr5.3:6627029-6627048 | MS.gene54622:intron | 40.0% | |
| CCACGCAAATTAATGGTGAT+AGG | + | chr5.3:6629236-6629255 | None:intergenic | 40.0% | |
| CCGTATAGGAATGTGGATAA+TGG | - | chr5.3:6628819-6628838 | MS.gene54622:CDS | 40.0% | |
| CTTGGACAGAATACAGAAAC+TGG | - | chr5.3:6628054-6628073 | MS.gene54622:intron | 40.0% | |
| GAAAGCGATTGTTGAGGTTA+TGG | - | chr5.3:6625351-6625370 | MS.gene54622:CDS | 40.0% | |
| GAGTAACAATAAGGAGGAAG+TGG | - | chr5.3:6628263-6628282 | MS.gene54622:intron | 40.0% | |
| GAGTTTGTGAAACCAAACAC+GGG | - | chr5.3:6628361-6628380 | MS.gene54622:intron | 40.0% | |
| GATGATGATTCCAATTGACC+AGG | - | chr5.3:6628710-6628729 | MS.gene54622:intron | 40.0% | |
| GATTCAGAAAGCGATTGTTG+AGG | - | chr5.3:6625345-6625364 | MS.gene54622:CDS | 40.0% | |
| GCAAGTATACGTAGAGAGAA+TGG | - | chr5.3:6628654-6628673 | MS.gene54622:intron | 40.0% | |
| GGATAAGAGCTTCTCATTTC+AGG | - | chr5.3:6629371-6629390 | MS.gene54622:intron | 40.0% | |
| GGATATAGTCACCAACTTCA+AGG | + | chr5.3:6629215-6629234 | None:intergenic | 40.0% | |
| GGATATTCTTGAAGAGGTAG+AGG | - | chr5.3:6626885-6626904 | MS.gene54622:CDS | 40.0% | |
| GGCCCGGTATTATAAAATAC+CGG | - | chr5.3:6629326-6629345 | MS.gene54622:intron | 40.0% | |
| GTACTAAATATCTGGGCACT+GGG | - | chr5.3:6629542-6629561 | MS.gene54622:CDS | 40.0% | |
| GTATAGGCTGATCACTTTCA+AGG | + | chr5.3:6628482-6628501 | None:intergenic | 40.0% | |
| GTATTCTGTCCAAGGGATAT+GGG | + | chr5.3:6628048-6628067 | None:intergenic | 40.0% | |
| GTGTGATCTGAGTGTAATTC+CGG | - | chr5.3:6627084-6627103 | MS.gene54622:intron | 40.0% | |
| TAAGACGTTGAGGAAGTTGT+TGG | - | chr5.3:6625534-6625553 | MS.gene54622:intron | 40.0% | |
| TATCACATGAGCATGGAAAC+AGG | + | chr5.3:6630178-6630197 | None:intergenic | 40.0% | |
| TATCATCTTGTGAGGTCAGA+TGG | - | chr5.3:6626272-6626291 | MS.gene54622:intron | 40.0% | |
| TATCCACATTCCTATACGGA+AGG | + | chr5.3:6628818-6628837 | None:intergenic | 40.0% | |
| TATGCCTCATATACTTGCCA+TGG | - | chr5.3:6629078-6629097 | MS.gene54622:intron | 40.0% | |
| TATTCTTGAAGAGGTAGAGG+AGG | - | chr5.3:6626888-6626907 | MS.gene54622:CDS | 40.0% | |
| TCAATAACCAGAAAAGCAGG+TGG | - | chr5.3:6628989-6629008 | MS.gene54622:intron | 40.0% | |
| TCCACAATTCCTTCTTCTGA+CGG | + | chr5.3:6629985-6630004 | None:intergenic | 40.0% | |
| TCTCTTACAAAGGTCATGTC+TGG | + | chr5.3:6628543-6628562 | None:intergenic | 40.0% | |
| TGAAAGTGATCAGCCTATAC+TGG | - | chr5.3:6628482-6628501 | MS.gene54622:intron | 40.0% | |
| TGGTGGCATGTAAAGATGAA+AGG | - | chr5.3:6626983-6627002 | MS.gene54622:intron | 40.0% | |
| TGTATTCTGTCCAAGGGATA+TGG | + | chr5.3:6628049-6628068 | None:intergenic | 40.0% | |
| TTACAAAGGTCATGTCTGGA+TGG | + | chr5.3:6628539-6628558 | None:intergenic | 40.0% | |
| TTTGGATACACTCAGAGTGT+CGG | - | chr5.3:6626178-6626197 | MS.gene54622:intron | 40.0% | |
| ! | AAATTACAACACATCGGCTG+TGG | - | chr5.3:6630476-6630495 | MS.gene54622:CDS | 40.0% |
| ! | AAGCTAGCTGAAATAATGGG+CGG | - | chr5.3:6630597-6630616 | MS.gene54622:CDS | 40.0% |
| ! | AATGCTTGCCGTTACTGTTT+TGG | - | chr5.3:6629510-6629529 | MS.gene54622:CDS | 40.0% |
| ! | AGAGGACGATGAAGTGTTTA+GGG | - | chr5.3:6625209-6625228 | MS.gene54622:CDS | 40.0% |
| ! | ATTTTTCCATAACCCGCTTC+AGG | + | chr5.3:6626804-6626823 | None:intergenic | 40.0% |
| ! | CAAAGGATCCTAAGGGTTTT+GGG | - | chr5.3:6628004-6628023 | MS.gene54622:intron | 40.0% |
| ! | CATGTTGAGAGAAGAAGTGT+TGG | - | chr5.3:6626927-6626946 | MS.gene54622:intron | 40.0% |
| ! | CGATGAAGTGTTTAGGGTTA+CGG | - | chr5.3:6625215-6625234 | MS.gene54622:CDS | 40.0% |
| ! | CTCGCATAGGTTGTGATTTT+TGG | - | chr5.3:6626413-6626432 | MS.gene54622:intron | 40.0% |
| ! | GAAAACTCAATCAAGAGCAC+CGG | + | chr5.3:6629348-6629367 | None:intergenic | 40.0% |
| ! | GCTCTTGATTGAGTTTTCAC+AGG | - | chr5.3:6629350-6629369 | MS.gene54622:intron | 40.0% |
| ! | TACTTGCTCTACATTTTCCC+CGG | - | chr5.3:6629851-6629870 | MS.gene54622:intron | 40.0% |
| ! | TGATGGAAGTGTGCTATTCT+TGG | - | chr5.3:6627814-6627833 | MS.gene54622:CDS | 40.0% |
| ! | TGCAACATTTCAGGTCATTG+TGG | - | chr5.3:6629119-6629138 | MS.gene54622:intron | 40.0% |
| ! | TTGGTTCCTTGAGTTTTTGC+TGG | - | chr5.3:6627833-6627852 | MS.gene54622:CDS | 40.0% |
| ! | TTTGATTCTGGTTGCTGCTT+CGG | - | chr5.3:6628770-6628789 | MS.gene54622:intron | 40.0% |
| !! | ATGGCTTGTTCATATTCTGG+GGG | - | chr5.3:6629448-6629467 | MS.gene54622:intron | 40.0% |
| !! | CACCATTAATTTGCGTGGAA+AGG | - | chr5.3:6629238-6629257 | MS.gene54622:CDS | 40.0% |
| !! | CCTATCACCATTAATTTGCG+TGG | - | chr5.3:6629233-6629252 | MS.gene54622:CDS | 40.0% |
| !! | CGTGGAAAGGAAAAGTATTC+AGG | - | chr5.3:6629251-6629270 | MS.gene54622:CDS | 40.0% |
| !! | GAAGACGAATAAGGTTGATG+TGG | - | chr5.3:6625396-6625415 | MS.gene54622:intron | 40.0% |
| !!! | GACAACCTTTTTTGGACTGT+TGG | + | chr5.3:6627037-6627056 | None:intergenic | 40.0% |
| !!! | TGCATCGTTGATGGCAATTT+TGG | - | chr5.3:6627278-6627297 | MS.gene54622:CDS | 40.0% |
| AAAAGCAGGTGGGAGAAAAG+AGG | - | chr5.3:6629000-6629019 | MS.gene54622:intron | 45.0% | |
| AAACAGGAGATGCACCAACA+TGG | + | chr5.3:6630162-6630181 | None:intergenic | 45.0% | |
| AACAAATGCAGTCCACAGCT+TGG | + | chr5.3:6626511-6626530 | None:intergenic | 45.0% | |
| AACTGTAGAGCTCAGGATGT+TGG | - | chr5.3:6630354-6630373 | MS.gene54622:CDS | 45.0% | |
| AATAAGGAGGAAGTGGCAAG+TGG | - | chr5.3:6628270-6628289 | MS.gene54622:intron | 45.0% | |
| ACCCTAATATCCACCACATC+CGG | + | chr5.3:6625301-6625320 | None:intergenic | 45.0% | |
| AGACCAGATTATACGTAGCC+GGG | + | chr5.3:6629872-6629891 | None:intergenic | 45.0% | |
| AGATACCCCTCAGTCTGATT+TGG | - | chr5.3:6628161-6628180 | MS.gene54622:intron | 45.0% | |
| AGGATTTGACGGTGGAGAAT+GGG | - | chr5.3:6625419-6625438 | MS.gene54622:intron | 45.0% | |
| ATCAGGTCGTCTATACAACC+AGG | - | chr5.3:6629293-6629312 | MS.gene54622:intron | 45.0% | |
| ATGTGAGTCAGGAGCTTGAA+AGG | - | chr5.3:6625269-6625288 | MS.gene54622:CDS | 45.0% | |
| ATTCCAGTGACCCTTGAAGT+TGG | - | chr5.3:6629201-6629220 | MS.gene54622:intron | 45.0% | |
| CACCGACAATGGCATTGTAT+TGG | - | chr5.3:6626963-6626982 | MS.gene54622:intron | 45.0% | |
| CAGTCAATCACTGCTACAGA+TGG | + | chr5.3:6627553-6627572 | None:intergenic | 45.0% | |
| CCAAAACCCTTAGGATCCTT+TGG | + | chr5.3:6628006-6628025 | None:intergenic | 45.0% | |
| CCACAATTCCTTCTTCTGAC+GGG | + | chr5.3:6629984-6630003 | None:intergenic | 45.0% | |
| CCCACCATATACTTCGTCAT+CGG | + | chr5.3:6625325-6625344 | None:intergenic | 45.0% | |
| CCGATGACGAAGTATATGGT+GGG | - | chr5.3:6625322-6625341 | MS.gene54622:CDS | 45.0% | |
| CCTGTGCATATTGATAGGCA+AGG | + | chr5.3:6630307-6630326 | None:intergenic | 45.0% | |
| CCTTGCCTATCAATATGCAC+AGG | - | chr5.3:6630304-6630323 | MS.gene54622:CDS | 45.0% | |
| CGACAATGGCATTGTATTGG+TGG | - | chr5.3:6626966-6626985 | MS.gene54622:intron | 45.0% | |
| CGATGACGAAGTATATGGTG+GGG | - | chr5.3:6625323-6625342 | MS.gene54622:CDS | 45.0% | |
| CTCTTCCAGAGTTTCACATC+AGG | - | chr5.3:6629276-6629295 | MS.gene54622:intron | 45.0% | |
| CTGTAGACGATGCAGTTCTT+CGG | - | chr5.3:6628391-6628410 | MS.gene54622:intron | 45.0% | |
| GAAGTGGCAAGTGGTAAAAC+TGG | - | chr5.3:6628279-6628298 | MS.gene54622:intron | 45.0% | |
| GAATTGTGGAAAGTGACGTG+AGG | - | chr5.3:6629995-6630014 | MS.gene54622:intron | 45.0% | |
| GAGACCAGATTATACGTAGC+CGG | + | chr5.3:6629873-6629892 | None:intergenic | 45.0% | |
| GATACCCCTCAGTCTGATTT+GGG | - | chr5.3:6628162-6628181 | MS.gene54622:intron | 45.0% | |
| GCCATGATTTGAACTGGTTG+AGG | + | chr5.3:6626587-6626606 | None:intergenic | 45.0% | |
| GCCTCAACCAGTTCAAATCA+TGG | - | chr5.3:6626583-6626602 | MS.gene54622:CDS | 45.0% | |
| GGACAGAATACAGAAACTGG+CGG | - | chr5.3:6628057-6628076 | MS.gene54622:intron | 45.0% | |
| GGAGACAGTTGGATCCAATT+TGG | - | chr5.3:6625470-6625489 | MS.gene54622:intron | 45.0% | |
| GGGTTAATGCTGTGATCACA+GGG | - | chr5.3:6630449-6630468 | MS.gene54622:CDS | 45.0% | |
| GGTTCCGATGACGAAGTATA+TGG | - | chr5.3:6625318-6625337 | MS.gene54622:CDS | 45.0% | |
| GTTTGTGAAACCAAACACGG+GGG | - | chr5.3:6628363-6628382 | MS.gene54622:intron | 45.0% | |
| TACCAGTCTGCCAGTGATAT+TGG | - | chr5.3:6629787-6629806 | MS.gene54622:intron | 45.0% | |
| TACCGAGGTTCAGAAGTTTG+AGG | - | chr5.3:6628632-6628651 | MS.gene54622:intron | 45.0% | |
| TATCAGAGTGGGCATGGTTT+AGG | - | chr5.3:6628923-6628942 | MS.gene54622:CDS | 45.0% | |
| TCCGATGACGAAGTATATGG+TGG | - | chr5.3:6625321-6625340 | MS.gene54622:CDS | 45.0% | |
| TGAGATTGTGAGGAGACAGT+TGG | - | chr5.3:6625459-6625478 | MS.gene54622:intron | 45.0% | |
| TGCCTCAAACTTCTGAACCT+CGG | + | chr5.3:6628637-6628656 | None:intergenic | 45.0% | |
| TGGAGAATCACGGTGAAATG+TGG | - | chr5.3:6625673-6625692 | MS.gene54622:intron | 45.0% | |
| TGTGAGTCAGGAGCTTGAAA+GGG | - | chr5.3:6625270-6625289 | MS.gene54622:CDS | 45.0% | |
| TTCAGGTCATTGTGGACATG+CGG | - | chr5.3:6629127-6629146 | MS.gene54622:intron | 45.0% | |
| TTTGTGAAACCAAACACGGG+GGG | - | chr5.3:6628364-6628383 | MS.gene54622:intron | 45.0% | |
| ! | AGCACTAGTTTCACCCATGT+GGG | + | chr5.3:6628328-6628347 | None:intergenic | 45.0% |
| ! | CCAAAGGATCCTAAGGGTTT+TGG | - | chr5.3:6628003-6628022 | MS.gene54622:intron | 45.0% |
| ! | CGGAGAGTTTTCGTTCTGTT+TGG | - | chr5.3:6626198-6626217 | MS.gene54622:intron | 45.0% |
| ! | CTTGTTCATATTCTGGGGGT+GGG | - | chr5.3:6629452-6629471 | MS.gene54622:intron | 45.0% |
| ! | GAGAGGACGATGAAGTGTTT+AGG | - | chr5.3:6625208-6625227 | MS.gene54622:CDS | 45.0% |
| ! | GGTTGATGTGGAGGATTTGA+CGG | - | chr5.3:6625408-6625427 | MS.gene54622:intron | 45.0% |
| ! | GTCCTGCTGTTTATCAGAGT+GGG | - | chr5.3:6628912-6628931 | MS.gene54622:CDS | 45.0% |
| ! | TGTCCTGCTGTTTATCAGAG+TGG | - | chr5.3:6628911-6628930 | MS.gene54622:CDS | 45.0% |
| !! | ACCGGATGTGGTGGATATTA+GGG | - | chr5.3:6625297-6625316 | MS.gene54622:CDS | 45.0% |
| !! | AGAGAAGAAGTGTTGGCTGA+AGG | - | chr5.3:6626934-6626953 | MS.gene54622:intron | 45.0% |
| !! | AGGAATGTGGATAATGGGCA+TGG | - | chr5.3:6628825-6628844 | MS.gene54622:CDS | 45.0% |
| !! | CATGAGCACTGATTGTTGTG+TGG | - | chr5.3:6626114-6626133 | MS.gene54622:intron | 45.0% |
| !! | GACGAATAAGGTTGATGTGG+AGG | - | chr5.3:6625399-6625418 | MS.gene54622:intron | 45.0% |
| !! | GAGTTTCTAAGACGACTTCC+TGG | - | chr5.3:6630498-6630517 | MS.gene54622:CDS | 45.0% |
| !! | TCGGTCCATTGTTCTGGAAA+TGG | - | chr5.3:6628789-6628808 | MS.gene54622:intron | 45.0% |
| !! | TCTTGGAAGAAGCACCAAAG+TGG | - | chr5.3:6626623-6626642 | MS.gene54622:CDS | 45.0% |
| !! | TTTTCTCCCACCTGCTTTTC+TGG | + | chr5.3:6628999-6629018 | None:intergenic | 45.0% |
| AACTGGCGGCATCAATAAGC+AGG | - | chr5.3:6628071-6628090 | MS.gene54622:intron | 50.0% | |
| AAGGTAGCTTCATGCTGCCA+AGG | - | chr5.3:6630048-6630067 | MS.gene54622:intron | 50.0% | |
| ACACGCAAGACCTTCCACTT+TGG | + | chr5.3:6626640-6626659 | None:intergenic | 50.0% | |
| AGATATGCCATGCCAAGCTG+TGG | - | chr5.3:6626496-6626515 | MS.gene54622:CDS | 50.0% | |
| AGGTAGCTTCATGCTGCCAA+GGG | - | chr5.3:6630049-6630068 | MS.gene54622:intron | 50.0% | |
| AGGTCGTCTATACAACCAGG+TGG | - | chr5.3:6629296-6629315 | MS.gene54622:intron | 50.0% | |
| CACCAATATCACTGGCAGAC+TGG | + | chr5.3:6629792-6629811 | None:intergenic | 50.0% | |
| CCCGTCAGAAGAAGGAATTG+TGG | - | chr5.3:6629981-6630000 | MS.gene54622:intron | 50.0% | |
| CTAATATCCACCACATCCGG+TGG | + | chr5.3:6625298-6625317 | None:intergenic | 50.0% | |
| CTGATGCCATGGCAAGAGAT+GGG | - | chr5.3:6628427-6628446 | MS.gene54622:intron | 50.0% | |
| CTGCCTTCCGTATAGGAATG+TGG | - | chr5.3:6628812-6628831 | MS.gene54622:intron | 50.0% | |
| GAAATGGCTGCCTTCCGTAT+AGG | - | chr5.3:6628805-6628824 | MS.gene54622:intron | 50.0% | |
| GAAGGTGAAGACACCGACAA+TGG | - | chr5.3:6626952-6626971 | MS.gene54622:intron | 50.0% | |
| GACCAGATTATACGTAGCCG+GGG | + | chr5.3:6629871-6629890 | None:intergenic | 50.0% | |
| GACGACCTGATGTGAAACTC+TGG | + | chr5.3:6629284-6629303 | None:intergenic | 50.0% | |
| GAGGAGGAAAGACGAAAGGA+AGG | - | chr5.3:6626904-6626923 | MS.gene54622:CDS | 50.0% | |
| GAGGATTTGACGGTGGAGAA+TGG | - | chr5.3:6625418-6625437 | MS.gene54622:intron | 50.0% | |
| GATTTGGGTGGACATGTTCG+TGG | - | chr5.3:6628177-6628196 | MS.gene54622:intron | 50.0% | |
| GCATACCTTTCCTGATGCCA+TGG | - | chr5.3:6628416-6628435 | MS.gene54622:intron | 50.0% | |
| GCTGTTTATCAGAGTGGGCA+TGG | - | chr5.3:6628917-6628936 | MS.gene54622:CDS | 50.0% | |
| GGCAGCCATTTCCAGAACAA+TGG | + | chr5.3:6628797-6628816 | None:intergenic | 50.0% | |
| GGGGTTAATGCTGTGATCAC+AGG | - | chr5.3:6630448-6630467 | MS.gene54622:CDS | 50.0% | |
| GGTAGAGGAGGAAAGACGAA+AGG | - | chr5.3:6626900-6626919 | MS.gene54622:CDS | 50.0% | |
| GGTGGACATGTTCGTGGAAA+AGG | - | chr5.3:6628183-6628202 | MS.gene54622:intron | 50.0% | |
| GTCCACCCAAATCAGACTGA+GGG | + | chr5.3:6628170-6628189 | None:intergenic | 50.0% | |
| TACAGATATCCCCCCGTGTT+TGG | + | chr5.3:6628376-6628395 | None:intergenic | 50.0% | |
| TAGACGATGCAGTTCTTCGG+AGG | - | chr5.3:6628394-6628413 | MS.gene54622:intron | 50.0% | |
| TCACCAACTTCAAGGGTCAC+TGG | + | chr5.3:6629207-6629226 | None:intergenic | 50.0% | |
| TCAGGTCATTGTGGACATGC+GGG | - | chr5.3:6629128-6629147 | MS.gene54622:intron | 50.0% | |
| TCCACCCAAATCAGACTGAG+GGG | + | chr5.3:6628169-6628188 | None:intergenic | 50.0% | |
| TCGTAGACTAGGGCTCTGTT+TGG | - | chr5.3:6625720-6625739 | MS.gene54622:intron | 50.0% | |
| TCTTGCCATGGCATCAGGAA+AGG | + | chr5.3:6628424-6628443 | None:intergenic | 50.0% | |
| TGATGTGGAGGATTTGACGG+TGG | - | chr5.3:6625411-6625430 | MS.gene54622:intron | 50.0% | |
| TGCCCACTCTGATAAACAGC+AGG | + | chr5.3:6628917-6628936 | None:intergenic | 50.0% | |
| TGTCCACCCAAATCAGACTG+AGG | + | chr5.3:6628171-6628190 | None:intergenic | 50.0% | |
| TTCCCCGGCTACGTATAATC+TGG | - | chr5.3:6629866-6629885 | MS.gene54622:intron | 50.0% | |
| ! | CAGCACTAGTTTCACCCATG+TGG | + | chr5.3:6628329-6628348 | None:intergenic | 50.0% |
| ! | GCTTGTTCATATTCTGGGGG+TGG | - | chr5.3:6629451-6629470 | MS.gene54622:intron | 50.0% |
| !! | CACCGGATGTGGTGGATATT+AGG | - | chr5.3:6625296-6625315 | MS.gene54622:CDS | 50.0% |
| !! | GGAAGAAGCACCAAAGTGGA+AGG | - | chr5.3:6626627-6626646 | MS.gene54622:CDS | 50.0% |
| !!! | GGTTTCTGGTTTTGCGAAGG+CGG | - | chr5.3:6625186-6625205 | MS.gene54622:CDS | 50.0% |
| ACCAGGTGGAAACAATGGCC+CGG | - | chr5.3:6629310-6629329 | MS.gene54622:intron | 55.0% | |
| ATGCAGTCCACAGCTTGGCA+TGG | + | chr5.3:6626506-6626525 | None:intergenic | 55.0% | |
| CCATCTCTTGCCATGGCATC+AGG | + | chr5.3:6628429-6628448 | None:intergenic | 55.0% | |
| CCTGATGCCATGGCAAGAGA+TGG | - | chr5.3:6628426-6628445 | MS.gene54622:intron | 55.0% | |
| GCTGCTTCGGTCCATTGTTC+TGG | - | chr5.3:6628783-6628802 | MS.gene54622:intron | 55.0% | |
| GGAGCTTGAAAGGGATCCAC+CGG | - | chr5.3:6625279-6625298 | MS.gene54622:CDS | 55.0% | |
| GGAGTCACTCCCATATCCCT+TGG | - | chr5.3:6628036-6628055 | MS.gene54622:intron | 55.0% | |
| TGAAAGGGATCCACCGGATG+TGG | - | chr5.3:6625285-6625304 | MS.gene54622:CDS | 55.0% | |
| TGGCTTCCCATCTCTTGCCA+TGG | + | chr5.3:6628436-6628455 | None:intergenic | 55.0% | |
| ! | GCAGGAGCATGATGCACTTC+TGG | - | chr5.3:6628089-6628108 | MS.gene54622:intron | 55.0% |
| !! | ACCCCTCAGTCTGATTTGGG+TGG | - | chr5.3:6628165-6628184 | MS.gene54622:intron | 55.0% |
| !! | GGATGACCTGAAGCGGGTTA+TGG | - | chr5.3:6626795-6626814 | MS.gene54622:intron | 55.0% |
| AAGGGATCCACCGGATGTGG+TGG | - | chr5.3:6625288-6625307 | MS.gene54622:CDS | 60.0% | |
| ACCGGGCCATTGTTTCCACC+TGG | + | chr5.3:6629314-6629333 | None:intergenic | 60.0% | |
| GTGGGTGTCCCGTCAGAAGA+AGG | - | chr5.3:6629973-6629992 | MS.gene54622:intron | 60.0% | |
| !!! | CTGGTTTTGCGAAGGCGGAG+AGG | - | chr5.3:6625191-6625210 | MS.gene54622:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 6625184 | 6630680 | 6625184 | ID=MS.gene54622 |
| chr5.3 | mRNA | 6625184 | 6630680 | 6625184 | ID=MS.gene54622.t1;Parent=MS.gene54622 |
| chr5.3 | exon | 6630295 | 6630680 | 6630295 | ID=MS.gene54622.t1.exon1;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6630295 | 6630680 | 6630295 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6629490 | 6629713 | 6629490 | ID=MS.gene54622.t1.exon2;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6629490 | 6629713 | 6629490 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6629207 | 6629292 | 6629207 | ID=MS.gene54622.t1.exon3;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6629207 | 6629292 | 6629207 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6628814 | 6628978 | 6628814 | ID=MS.gene54622.t1.exon4;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6628814 | 6628978 | 6628814 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6627133 | 6627936 | 6627133 | ID=MS.gene54622.t1.exon5;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6627133 | 6627936 | 6627133 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6626825 | 6626935 | 6626825 | ID=MS.gene54622.t1.exon6;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6626825 | 6626935 | 6626825 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6626472 | 6626732 | 6626472 | ID=MS.gene54622.t1.exon7;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6626472 | 6626732 | 6626472 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6625848 | 6626071 | 6625848 | ID=MS.gene54622.t1.exon8;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6625848 | 6626071 | 6625848 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| chr5.3 | exon | 6625184 | 6625394 | 6625184 | ID=MS.gene54622.t1.exon9;Parent=MS.gene54622.t1 |
| chr5.3 | CDS | 6625184 | 6625394 | 6625184 | ID=cds.MS.gene54622.t1;Parent=MS.gene54622.t1 |
| Gene Sequence |
| Protein sequence |
