Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54737.t1 | XP_003607049.1 | 96.9 | 286 | 4 | 1 | 1 | 286 | 76 | 356 | 2.70E-148 | 534.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54737.t1 | G7JJU3 | 96.9 | 286 | 4 | 1 | 1 | 286 | 76 | 356 | 2.0e-148 | 534.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049320 | MS.gene54737 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene54737 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene54737 | 0.820728 | 5.89E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene54737 | 0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene54737 | -0.813315 | 2.72E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene54737 | 0.815212 | 1.04E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene54737 | 0.812435 | 4.25E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene54737 | 0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene54737 | 0.811959 | 5.39E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene54737 | 0.807059 | 6.08E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene54737 | 0.819105 | 1.38E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene54737 | 0.816764 | 4.67E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene54737 | 0.800242 | 1.58E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene54737 | 0.802493 | 5.46E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene54737 | 0.800501 | 1.40E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene54737 | 0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene54737 | 0.804536 | 2.06E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene54737 | 0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene059229 | MS.gene54737 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene54737 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene54737 | 0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene54737 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene54737 | 0.82954 | 4.86E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54737.t1 | MTR_6g008890 | 96.853 | 286 | 4 | 1 | 1 | 286 | 76 | 356 | 0.0 | 562 |
| MS.gene54737.t1 | MTR_4g071610 | 96.853 | 286 | 4 | 1 | 1 | 286 | 76 | 356 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54737.t1 | AT5G14970 | 57.986 | 288 | 104 | 6 | 1 | 286 | 83 | 355 | 2.59e-105 | 310 |
| MS.gene54737.t1 | AT2G14910 | 38.487 | 304 | 156 | 7 | 1 | 285 | 84 | 375 | 8.82e-55 | 182 |
| MS.gene54737.t1 | AT2G14910 | 36.299 | 281 | 148 | 7 | 1 | 262 | 84 | 352 | 1.58e-43 | 152 |
| MS.gene54737.t1 | AT1G63610 | 25.704 | 284 | 160 | 6 | 2 | 284 | 93 | 326 | 1.30e-17 | 82.0 |
Find 69 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCATCATTTCCTGCTTC+TGG | 0.140167 | 6.2:-4473368 | None:intergenic |
| TGATTTGGGGTTAGCGAATT+TGG | 0.145194 | 6.2:+4471981 | MS.gene54737:CDS |
| CGAAGCTAGCTCTAACTTTA+TGG | 0.171310 | 6.2:+4473872 | MS.gene54737:CDS |
| GAGAAGGTTGTTTCTGATTT+GGG | 0.261359 | 6.2:+4471967 | MS.gene54737:CDS |
| TGAGAAGGTTGTTTCTGATT+TGG | 0.269725 | 6.2:+4471966 | MS.gene54737:CDS |
| TCGCTCTTTCGATCCTGATA+TGG | 0.292029 | 6.2:+4473434 | MS.gene54737:CDS |
| TGAAACGCCTTTGGAGAGTT+TGG | 0.312467 | 6.2:+4471909 | MS.gene54737:CDS |
| ATTGGCAGGTGTATGTTATT+AGG | 0.317981 | 6.2:+4474380 | MS.gene54737:intron |
| TTGCATCATTTCCTGCTTCT+GGG | 0.339715 | 6.2:-4473367 | None:intergenic |
| CTTGTTTCTTCTATCATCAC+TGG | 0.342003 | 6.2:+4469799 | MS.gene54737:CDS |
| AGTAGTGGCGCGGGAGTCTT+TGG | 0.374614 | 6.2:+4472018 | MS.gene54737:CDS |
| TTGTGAGGCATTACCATATC+AGG | 0.383147 | 6.2:-4473447 | None:intergenic |
| GGCGGATTGTGAAACGCCTT+TGG | 0.383400 | 6.2:+4471900 | MS.gene54737:CDS |
| GATGTCCTTGACGAGGAATC+TGG | 0.386448 | 6.2:+4471855 | MS.gene54737:CDS |
| CTTTGGAGATTTGCCGCCTC+AGG | 0.387256 | 6.2:+4472035 | MS.gene54737:CDS |
| GAAATGTCACATGCGGATCA+AGG | 0.413539 | 6.2:+4471877 | MS.gene54737:CDS |
| TTATTAGGTCATCACTTAAG+AGG | 0.413839 | 6.2:+4474395 | MS.gene54737:CDS |
| AGGAATTCGGAACAATTTGC+TGG | 0.420898 | 6.2:+4473404 | MS.gene54737:CDS |
| CAAACTATTTCTACTATGCT+TGG | 0.427819 | 6.2:+4469712 | MS.gene54737:CDS |
| AACTCATCACCATCATCGTC+CGG | 0.439465 | 6.2:-4473927 | None:intergenic |
| TTTATGGAACAATCAGTAGA+AGG | 0.441983 | 6.2:+4473888 | MS.gene54737:CDS |
| TAGAACACGACAGAGGAATT+CGG | 0.452227 | 6.2:+4473391 | MS.gene54737:CDS |
| TTTGGAGAGTTTGGAGGTGA+AGG | 0.469770 | 6.2:+4471918 | MS.gene54737:CDS |
| TGAAACACCTTTAGAGATAA+CGG | 0.471773 | 6.2:-4469665 | None:intergenic |
| TTGCATTTGAGCTGTGTTGT+CGG | 0.482310 | 6.2:+4474431 | MS.gene54737:CDS |
| AGGTCATCACTTAAGAGGAT+TGG | 0.496502 | 6.2:+4474400 | MS.gene54737:CDS |
| AAGGGTGGTGAAGAGGAACA+TGG | 0.497735 | 6.2:+4471937 | MS.gene54737:CDS |
| TTGGAGAGTTTGGAGGTGAA+GGG | 0.499148 | 6.2:+4471919 | MS.gene54737:CDS |
| CACTATGGAATGCAGAATAC+AGG | 0.499197 | 6.2:+4471833 | MS.gene54737:CDS |
| GGAGTTGAATGCCCAGAAGC+AGG | 0.516158 | 6.2:+4473356 | MS.gene54737:intron |
| TCGGCCGTCATCAGAGGAAG+TGG | 0.517662 | 6.2:+4473797 | MS.gene54737:CDS |
| TGCAGCAGCAGTAGTGGCGC+GGG | 0.518440 | 6.2:+4472009 | MS.gene54737:CDS |
| AGGGTGGTGAAGAGGAACAT+GGG | 0.520509 | 6.2:+4471938 | MS.gene54737:CDS |
| GATAACTCCGTTATCTCTAA+AGG | 0.520590 | 6.2:+4469658 | MS.gene54737:CDS |
| TTGAGATTCAACCTCTTCAT+CGG | 0.522451 | 6.2:+4469773 | MS.gene54737:CDS |
| AAATGTCACATGCGGATCAA+GGG | 0.539240 | 6.2:+4471878 | MS.gene54737:CDS |
| GGAGGTGAAGGGTGGTGAAG+AGG | 0.541144 | 6.2:+4471930 | MS.gene54737:CDS |
| GACTATCACCCGGACGATGA+TGG | 0.547884 | 6.2:+4473918 | MS.gene54737:CDS |
| TTGCAGCAGCAGTAGTGGCG+CGG | 0.554960 | 6.2:+4472008 | MS.gene54737:CDS |
| AACGCCTTTGGAGAGTTTGG+AGG | 0.556576 | 6.2:+4471912 | MS.gene54737:CDS |
| AGAAGGTTGTTTCTGATTTG+GGG | 0.556586 | 6.2:+4471968 | MS.gene54737:CDS |
| TTGTTTCTTCTATCATCACT+GGG | 0.557906 | 6.2:+4469800 | MS.gene54737:CDS |
| TCCTCCACTTCCTCTGATGA+CGG | 0.560560 | 6.2:-4473801 | None:intergenic |
| GAGAGTTTGGAGGTGAAGGG+TGG | 0.560667 | 6.2:+4471922 | MS.gene54737:CDS |
| ACCAGAAAAGCAACTTTGCT+AGG | 0.561251 | 6.2:-4473980 | None:intergenic |
| GAAACTTGCAGCAGCAGTAG+TGG | 0.563292 | 6.2:+4472003 | MS.gene54737:CDS |
| GAAACAAGTAACCGATGAAG+AGG | 0.564989 | 6.2:-4469784 | None:intergenic |
| GTAACATCAAAATGATCAGA+AGG | 0.580361 | 6.2:-4469742 | None:intergenic |
| GATAGGTGACTGAAATGTCT+CGG | 0.586884 | 6.2:+4473778 | MS.gene54737:intron |
| ACTCATCACCATCATCGTCC+GGG | 0.590352 | 6.2:-4473926 | None:intergenic |
| GTCTGAGTTGACAAACATGA+AGG | 0.606464 | 6.2:+4472083 | MS.gene54737:CDS |
| TAGAGCTAGCTTCGTCGACA+AGG | 0.606575 | 6.2:-4473863 | None:intergenic |
| TGCTAGGTAATCGCGAGAAG+TGG | 0.609297 | 6.2:-4473964 | None:intergenic |
| AATGTCTCGGCCGTCATCAG+AGG | 0.610274 | 6.2:+4473791 | MS.gene54737:CDS |
| TTCACCTCCAAACTCTCCAA+AGG | 0.616503 | 6.2:-4471916 | None:intergenic |
| AATGTCACATGCGGATCAAG+GGG | 0.619045 | 6.2:+4471879 | MS.gene54737:CDS |
| GAGATAACGGAGTTATCGAG+AGG | 0.629687 | 6.2:-4469652 | None:intergenic |
| GTCACATGCGGATCAAGGGG+CGG | 0.635815 | 6.2:+4471882 | MS.gene54737:CDS |
| GGAACATGGGGAAACTGAGA+AGG | 0.640390 | 6.2:+4471951 | MS.gene54737:CDS |
| GGGTGGTGAAGAGGAACATG+GGG | 0.644636 | 6.2:+4471939 | MS.gene54737:CDS |
| GCCGTCATCAGAGGAAGTGG+AGG | 0.649197 | 6.2:+4473800 | MS.gene54737:CDS |
| CATTTCCAGATTCCTCGTCA+AGG | 0.649722 | 6.2:-4471860 | None:intergenic |
| GAATCTGGAAATGTCACATG+CGG | 0.666921 | 6.2:+4471870 | MS.gene54737:CDS |
| TGAATGTATTTCAGAGCCTG+AGG | 0.668987 | 6.2:-4472051 | None:intergenic |
| ATGTATTTCAGAGCCTGAGG+CGG | 0.676018 | 6.2:-4472048 | None:intergenic |
| TGAGTTGACAAACATGAAGG+AGG | 0.679770 | 6.2:+4472086 | MS.gene54737:CDS |
| AGGAAACATAGACTATCACC+CGG | 0.708791 | 6.2:+4473908 | MS.gene54737:CDS |
| ATGCAATTAGAACACGACAG+AGG | 0.723714 | 6.2:+4473384 | MS.gene54737:CDS |
| AATACAGGATGTCCTTGACG+AGG | 0.724418 | 6.2:+4471848 | MS.gene54737:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATTATAGAAAATTG+AGG | - | chr6.2:4469841-4469860 | None:intergenic | 15.0% |
| !! | ATAAACTTAAAATTCAATCA+AGG | - | chr6.2:4472219-4472238 | None:intergenic | 15.0% |
| !! | TTATGAATTTAGCATTATAT+TGG | + | chr6.2:4470783-4470802 | MS.gene54737:intron | 15.0% |
| !!! | GTTGACAATATAAATTATTT+TGG | - | chr6.2:4470696-4470715 | None:intergenic | 15.0% |
| !!! | TGAATTTTAAGTTTATGTAT+CGG | + | chr6.2:4472223-4472242 | MS.gene54737:intron | 15.0% |
| !!! | TTAGAATTTTGTTAATTTCA+AGG | + | chr6.2:4474254-4474273 | MS.gene54737:intron | 15.0% |
| !! | AAATTATAGAAAATTGAGGT+AGG | - | chr6.2:4469837-4469856 | None:intergenic | 20.0% |
| !! | AATACTTTGACAAACAAAAA+TGG | - | chr6.2:4470441-4470460 | None:intergenic | 20.0% |
| !! | ACATGATTAAACACAATAAA+CGG | - | chr6.2:4474353-4474372 | None:intergenic | 20.0% |
| !! | ATTTAGTCTCTATATAATTC+CGG | - | chr6.2:4474180-4474199 | None:intergenic | 20.0% |
| !! | GTGACAACTTAATATAAATA+GGG | - | chr6.2:4471579-4471598 | None:intergenic | 20.0% |
| !! | GTTATTATTGTGAGAAAAAA+AGG | + | chr6.2:4472623-4472642 | MS.gene54737:intron | 20.0% |
| !! | TATTTGATAAATCTCAAAGT+TGG | + | chr6.2:4471282-4471301 | MS.gene54737:intron | 20.0% |
| !! | TCATTCTGTCAAATTATTAT+CGG | + | chr6.2:4470236-4470255 | MS.gene54737:intron | 20.0% |
| !!! | AACTGAATTTTACAAAATCA+GGG | + | chr6.2:4471345-4471364 | MS.gene54737:intron | 20.0% |
| !!! | AATAATAACCTTCAAGTTAT+CGG | - | chr6.2:4472612-4472631 | None:intergenic | 20.0% |
| !!! | AATTTTTTATTATTCCAAGG+AGG | + | chr6.2:4472191-4472210 | MS.gene54737:intron | 20.0% |
| !!! | GAATAATTTGTTTGAAAGAA+TGG | - | chr6.2:4472731-4472750 | None:intergenic | 20.0% |
| !!! | GAATTTTAAGTTTATGTATC+GGG | + | chr6.2:4472224-4472243 | MS.gene54737:intron | 20.0% |
| !!! | TATTCTTTGTTGTTTGTATT+GGG | + | chr6.2:4472746-4472765 | MS.gene54737:intron | 20.0% |
| !!! | TCATTTTGTCGAATTATTAT+CGG | + | chr6.2:4470024-4470043 | MS.gene54737:intron | 20.0% |
| !!! | TGCAATTTTTTATTATTCCA+AGG | + | chr6.2:4472188-4472207 | MS.gene54737:intron | 20.0% |
| !!! | TTATTCTTTGTTGTTTGTAT+TGG | + | chr6.2:4472745-4472764 | MS.gene54737:intron | 20.0% |
| !!! | TTTGTTTGTCAAAGTATTAT+TGG | + | chr6.2:4470443-4470462 | MS.gene54737:intron | 20.0% |
| ! | AAAAAGCAAAATCTGTTGTA+AGG | - | chr6.2:4474028-4474047 | None:intergenic | 25.0% |
| ! | AAAAGCAAAATCTGTTGTAA+GGG | - | chr6.2:4474027-4474046 | None:intergenic | 25.0% |
| ! | AAATTGAAAAATGGTCTAAC+CGG | + | chr6.2:4474158-4474177 | MS.gene54737:intron | 25.0% |
| ! | AAGATATTATCGCCAAATTA+AGG | + | chr6.2:4471158-4471177 | MS.gene54737:intron | 25.0% |
| ! | AATGAATGCATCAAAAGAAA+TGG | + | chr6.2:4473257-4473276 | MS.gene54737:intron | 25.0% |
| ! | AATTTAGCACTCAAAACATT+AGG | + | chr6.2:4471097-4471116 | MS.gene54737:intron | 25.0% |
| ! | AATTTGAGAGTGACAATAAT+TGG | + | chr6.2:4470620-4470639 | MS.gene54737:intron | 25.0% |
| ! | AATTTGGTCCATGAAATTAT+AGG | - | chr6.2:4474294-4474313 | None:intergenic | 25.0% |
| ! | ATAAAAAGTTTCACAACCAT+AGG | - | chr6.2:4472259-4472278 | None:intergenic | 25.0% |
| ! | ATTCATAGAATGGTGAAAAT+AGG | - | chr6.2:4473225-4473244 | None:intergenic | 25.0% |
| ! | ATTGACATATAACTAGTAAG+AGG | - | chr6.2:4472913-4472932 | None:intergenic | 25.0% |
| ! | ATTTAGCACTCAAAACATTA+GGG | + | chr6.2:4471098-4471117 | MS.gene54737:intron | 25.0% |
| ! | CAACTTAATATAAATAGGGA+CGG | - | chr6.2:4471575-4471594 | None:intergenic | 25.0% |
| ! | GAAATTGATAAGGTTTGAAT+TGG | + | chr6.2:4471786-4471805 | MS.gene54737:intron | 25.0% |
| ! | GGTGACAACTTAATATAAAT+AGG | - | chr6.2:4471580-4471599 | None:intergenic | 25.0% |
| ! | TAAACTCAAATTACTATCAG+TGG | - | chr6.2:4472292-4472311 | None:intergenic | 25.0% |
| ! | TATATAGAGACTAAATGAAC+CGG | + | chr6.2:4474184-4474203 | MS.gene54737:intron | 25.0% |
| ! | TGATCCATGAAATTGAAAAA+TGG | + | chr6.2:4474149-4474168 | MS.gene54737:intron | 25.0% |
| ! | TTACTCATAGACTGTTTAAA+AGG | + | chr6.2:4473285-4473304 | MS.gene54737:intron | 25.0% |
| ! | TTTAATCATGTTCTTTCCAT+TGG | + | chr6.2:4474362-4474381 | MS.gene54737:intron | 25.0% |
| !! | ACTGAATTTTACAAAATCAG+GGG | + | chr6.2:4471346-4471365 | MS.gene54737:intron | 25.0% |
| !! | ATGGTTGTGAAACTTTTTAT+CGG | + | chr6.2:4472259-4472278 | MS.gene54737:intron | 25.0% |
| !! | CAAAATATGAAGTTGGTTAT+CGG | + | chr6.2:4471197-4471216 | MS.gene54737:intron | 25.0% |
| !! | GAACTGAATTTTACAAAATC+AGG | + | chr6.2:4471344-4471363 | MS.gene54737:intron | 25.0% |
| !!! | GACAATGTTTATTTTCTTTC+AGG | + | chr6.2:4473335-4473354 | MS.gene54737:intron | 25.0% |
| !!! | GACTTTTTTACTTTATGACA+AGG | - | chr6.2:4472375-4472394 | None:intergenic | 25.0% |
| !!! | GCAATATTTTGAAGTTTTAG+AGG | + | chr6.2:4471681-4471700 | MS.gene54737:intron | 25.0% |
| !!! | GCTCTATTTTTGTTACTAAT+TGG | + | chr6.2:4471725-4471744 | MS.gene54737:intron | 25.0% |
| !!! | TAGACCATTTTTCAATTTCA+TGG | - | chr6.2:4474156-4474175 | None:intergenic | 25.0% |
| !!! | TAGCTTATTTCTATTTGCAA+AGG | + | chr6.2:4473713-4473732 | MS.gene54737:intron | 25.0% |
| !!! | TCAAAATGTTTTGAACAAGT+TGG | - | chr6.2:4473836-4473855 | None:intergenic | 25.0% |
| !!! | TTTTGTTACTAATTGGTTTC+TGG | + | chr6.2:4471732-4471751 | MS.gene54737:intron | 25.0% |
| ACATGCTATAAAAAAGAGCT+CGG | - | chr6.2:4474326-4474345 | None:intergenic | 30.0% | |
| AGAACTATGTTTGTTTCGAT+CGG | + | chr6.2:4472326-4472345 | MS.gene54737:intron | 30.0% | |
| AGGTATCCAAAATATGAAGT+TGG | + | chr6.2:4471190-4471209 | MS.gene54737:intron | 30.0% | |
| ATAATATCCTAAACACGCTT+AGG | + | chr6.2:4472951-4472970 | MS.gene54737:intron | 30.0% | |
| CAGACACATTTCTATCAAAA+GGG | - | chr6.2:4469966-4469985 | None:intergenic | 30.0% | |
| CTATTAATTACGTGTGTGTT+TGG | + | chr6.2:4470324-4470343 | MS.gene54737:intron | 30.0% | |
| GGATTGTGTAAATTTGACTA+TGG | + | chr6.2:4470528-4470547 | MS.gene54737:intron | 30.0% | |
| GTAACATCAAAATGATCAGA+AGG | - | chr6.2:4469745-4469764 | None:intergenic | 30.0% | |
| TAATATCCTAAACACGCTTA+GGG | + | chr6.2:4472952-4472971 | MS.gene54737:intron | 30.0% | |
| TAATCATTAGTGTCAGTGTT+GGG | - | chr6.2:4469992-4470011 | None:intergenic | 30.0% | |
| TTATATTGGTGTGATTCAAG+TGG | + | chr6.2:4470797-4470816 | MS.gene54737:intron | 30.0% | |
| TTATCAATCATGTGTGTGTT+TGG | + | chr6.2:4470114-4470133 | MS.gene54737:intron | 30.0% | |
| TTATTAGGTCATCACTTAAG+AGG | + | chr6.2:4474395-4474414 | MS.gene54737:CDS | 30.0% | |
| TTCAACTTTGTTAATCACAC+TGG | + | chr6.2:4473748-4473767 | MS.gene54737:intron | 30.0% | |
| TTGTAAATTTGTGAGAAGTG+AGG | + | chr6.2:4472803-4472822 | MS.gene54737:intron | 30.0% | |
| TTGTACTAAAAAACGTATCG+TGG | - | chr6.2:4473568-4473587 | None:intergenic | 30.0% | |
| TTTATGGAACAATCAGTAGA+AGG | + | chr6.2:4473888-4473907 | MS.gene54737:CDS | 30.0% | |
| ! | AACCAAGTATTGTCAAATAG+CGG | + | chr6.2:4473495-4473514 | MS.gene54737:intron | 30.0% |
| ! | CGATAACCAACTTCATATTT+TGG | - | chr6.2:4471199-4471218 | None:intergenic | 30.0% |
| ! | CTCTCAATTTAGAACCAAAT+TGG | + | chr6.2:4470938-4470957 | MS.gene54737:intron | 30.0% |
| ! | CTTTTGATGCATTCATAGAA+TGG | - | chr6.2:4473235-4473254 | None:intergenic | 30.0% |
| ! | GGACATTAATCTTTTTGAAC+CGG | - | chr6.2:4474206-4474225 | None:intergenic | 30.0% |
| ! | TAAACATGTGCACAAGTTTT+TGG | + | chr6.2:4473056-4473075 | MS.gene54737:intron | 30.0% |
| ! | TCTGAAATTGAAAATTCGCA+AGG | - | chr6.2:4474227-4474246 | None:intergenic | 30.0% |
| ! | TGAAACACCTTTAGAGATAA+CGG | - | chr6.2:4469668-4469687 | None:intergenic | 30.0% |
| ! | TTGTCAAAGTATTATTGGTG+TGG | + | chr6.2:4470448-4470467 | MS.gene54737:intron | 30.0% |
| ! | TTGTTTCTTCTATCATCACT+GGG | + | chr6.2:4469800-4469819 | MS.gene54737:CDS | 30.0% |
| !! | CAAACTATTTCTACTATGCT+TGG | + | chr6.2:4469712-4469731 | MS.gene54737:CDS | 30.0% |
| !! | GGATGTTTTTAATTGTGCTT+TGG | + | chr6.2:4470858-4470877 | MS.gene54737:intron | 30.0% |
| !! | TTTTGGGTGTGAAATTGATA+AGG | + | chr6.2:4471776-4471795 | MS.gene54737:intron | 30.0% |
| !!! | AGTTTTAGAGGATTAATGTG+AGG | + | chr6.2:4471693-4471712 | MS.gene54737:intron | 30.0% |
| !!! | GTTTTAGAGGATTAATGTGA+GGG | + | chr6.2:4471694-4471713 | MS.gene54737:intron | 30.0% |
| !!! | TGTAGTGATTAGTTTTGTAG+TGG | + | chr6.2:4470886-4470905 | MS.gene54737:intron | 30.0% |
| !!! | TGTTGTTTTTAATTGTGCTC+TGG | + | chr6.2:4471018-4471037 | MS.gene54737:intron | 30.0% |
| AAAATAGGATCAATTCTGGC+CGG | - | chr6.2:4473210-4473229 | None:intergenic | 35.0% | |
| AAAGGACACTTTCTGATAGA+AGG | + | chr6.2:4470150-4470169 | MS.gene54737:intron | 35.0% | |
| AACTAGAGTCGTATGTGATT+AGG | + | chr6.2:4470976-4470995 | MS.gene54737:intron | 35.0% | |
| AATGGTTGATTAAGGAAGCT+AGG | + | chr6.2:4471226-4471245 | MS.gene54737:intron | 35.0% | |
| AGAATTATTGACAATCGCTG+TGG | - | chr6.2:4472453-4472472 | None:intergenic | 35.0% | |
| AGATTCATAGATTGAGTGGA+TGG | + | chr6.2:4470507-4470526 | MS.gene54737:intron | 35.0% | |
| AGTACACCTATAAAAGCCTA+AGG | + | chr6.2:4472992-4473011 | MS.gene54737:intron | 35.0% | |
| ATGAACAACCGATAACTTGA+AGG | + | chr6.2:4472601-4472620 | MS.gene54737:intron | 35.0% | |
| ATTGGCAGGTGTATGTTATT+AGG | + | chr6.2:4474380-4474399 | MS.gene54737:intron | 35.0% | |
| ATTGTAATCAATCCTGTGTG+TGG | + | chr6.2:4469897-4469916 | MS.gene54737:intron | 35.0% | |
| CCAGACACATTTCTATCAAA+AGG | - | chr6.2:4469967-4469986 | None:intergenic | 35.0% | |
| GAGTGACAATAATTGGATGA+TGG | + | chr6.2:4470627-4470646 | MS.gene54737:intron | 35.0% | |
| GATAACTCCGTTATCTCTAA+AGG | + | chr6.2:4469658-4469677 | MS.gene54737:CDS | 35.0% | |
| GCTTATGACAACAAGCTATA+TGG | - | chr6.2:4473148-4473167 | None:intergenic | 35.0% | |
| GGTGAAAATAGGATCAATTC+TGG | - | chr6.2:4473214-4473233 | None:intergenic | 35.0% | |
| GTAATCATTAGTGTCAGTGT+TGG | - | chr6.2:4469993-4470012 | None:intergenic | 35.0% | |
| GTGATTAGAGTTCGAACATT+GGG | + | chr6.2:4470831-4470850 | MS.gene54737:intron | 35.0% | |
| TAATAACATACACCTGCCAA+TGG | - | chr6.2:4474381-4474400 | None:intergenic | 35.0% | |
| TACTTAGCCAACAAAACTTC+AGG | + | chr6.2:4470651-4470670 | MS.gene54737:intron | 35.0% | |
| TCAATATCGTCCATAACAGA+TGG | - | chr6.2:4472483-4472502 | None:intergenic | 35.0% | |
| TCAGAGATTCATAGATTGAG+TGG | + | chr6.2:4470503-4470522 | MS.gene54737:intron | 35.0% | |
| TGTGATTAGAGTTCGAACAT+TGG | + | chr6.2:4470830-4470849 | MS.gene54737:intron | 35.0% | |
| TTGAGATTCAACCTCTTCAT+CGG | + | chr6.2:4469773-4469792 | MS.gene54737:CDS | 35.0% | |
| TTGCGATGCCTATAATTTCA+TGG | + | chr6.2:4474283-4474302 | MS.gene54737:intron | 35.0% | |
| ! | AATCAAGTTGCAATTGAGAG+TGG | + | chr6.2:4473678-4473697 | MS.gene54737:intron | 35.0% |
| ! | CCAAATTAAGGTGCTCTTTA+AGG | + | chr6.2:4471170-4471189 | MS.gene54737:intron | 35.0% |
| ! | CCTTTTGATAGAAATGTGTC+TGG | + | chr6.2:4469964-4469983 | MS.gene54737:intron | 35.0% |
| ! | CTTGTTTCTTCTATCATCAC+TGG | + | chr6.2:4469799-4469818 | MS.gene54737:CDS | 35.0% |
| ! | GAACGTTTAGCATTTGAGTT+TGG | + | chr6.2:4471047-4471066 | MS.gene54737:intron | 35.0% |
| ! | TGTGCGAAGATGATGTTTTT+GGG | + | chr6.2:4471760-4471779 | MS.gene54737:intron | 35.0% |
| ! | TTGTGCGAAGATGATGTTTT+TGG | + | chr6.2:4471759-4471778 | MS.gene54737:intron | 35.0% |
| ! | TTTCGTCTCATTCTCTTTTC+CGG | + | chr6.2:4473188-4473207 | MS.gene54737:intron | 35.0% |
| ! | TTTTCGTTAGGTACACACTA+TGG | + | chr6.2:4471818-4471837 | MS.gene54737:intron | 35.0% |
| ! | TTTTGGTCAACACATCACTA+CGG | - | chr6.2:4470679-4470698 | None:intergenic | 35.0% |
| !! | AGAAGGTTGTTTCTGATTTG+GGG | + | chr6.2:4471968-4471987 | MS.gene54737:CDS | 35.0% |
| !! | AGTAAGTTCTGAAATTGGAG+AGG | + | chr6.2:4471370-4471389 | MS.gene54737:intron | 35.0% |
| !! | CCTTAAAGAGCACCTTAATT+TGG | - | chr6.2:4471173-4471192 | None:intergenic | 35.0% |
| !! | GAGAAGGTTGTTTCTGATTT+GGG | + | chr6.2:4471967-4471986 | MS.gene54737:CDS | 35.0% |
| !! | GTAAGTTCTGAAATTGGAGA+GGG | + | chr6.2:4471371-4471390 | MS.gene54737:intron | 35.0% |
| !! | GTCTCTGAAATTGTAAGAGT+CGG | + | chr6.2:4474100-4474119 | MS.gene54737:intron | 35.0% |
| !! | TCTATCAGAAAGTGTCCTTT+CGG | - | chr6.2:4470150-4470169 | None:intergenic | 35.0% |
| !! | TGAGAAGGTTGTTTCTGATT+TGG | + | chr6.2:4471966-4471985 | MS.gene54737:CDS | 35.0% |
| !! | TTTGCGCTTTTGAAAGATTG+AGG | + | chr6.2:4471645-4471664 | MS.gene54737:intron | 35.0% |
| !!! | ATTAGTTTTGTAGTGGAGTG+TGG | + | chr6.2:4470893-4470912 | MS.gene54737:intron | 35.0% |
| AAATGTCACATGCGGATCAA+GGG | + | chr6.2:4471878-4471897 | MS.gene54737:CDS | 40.0% | |
| ACACCTATAAAAGCCTAAGG+AGG | + | chr6.2:4472995-4473014 | MS.gene54737:intron | 40.0% | |
| ACCACCAAAAAATGCTGTAC+TGG | - | chr6.2:4471537-4471556 | None:intergenic | 40.0% | |
| ACCAGAAAAGCAACTTTGCT+AGG | - | chr6.2:4473983-4474002 | None:intergenic | 40.0% | |
| ACCTATAAAAGCCTAAGGAG+GGG | + | chr6.2:4472997-4473016 | MS.gene54737:intron | 40.0% | |
| AGCATAGAGATGGAAAGAGA+TGG | - | chr6.2:4472668-4472687 | None:intergenic | 40.0% | |
| AGCTCGGTAAATCGTCAATT+TGG | - | chr6.2:4474310-4474329 | None:intergenic | 40.0% | |
| AGGAAACATAGACTATCACC+CGG | + | chr6.2:4473908-4473927 | MS.gene54737:CDS | 40.0% | |
| AGGAATTCGGAACAATTTGC+TGG | + | chr6.2:4473404-4473423 | MS.gene54737:CDS | 40.0% | |
| AGGTCATCACTTAAGAGGAT+TGG | + | chr6.2:4474400-4474419 | MS.gene54737:CDS | 40.0% | |
| ATAATCGTAGAACCACACAC+AGG | - | chr6.2:4469912-4469931 | None:intergenic | 40.0% | |
| ATCACACTGGATGTCTTGAT+AGG | + | chr6.2:4473761-4473780 | MS.gene54737:intron | 40.0% | |
| ATCATGTTCTTTCCATTGGC+AGG | + | chr6.2:4474366-4474385 | MS.gene54737:intron | 40.0% | |
| ATGCAATTAGAACACGACAG+AGG | + | chr6.2:4473384-4473403 | MS.gene54737:CDS | 40.0% | |
| ATTGCATCATTTCCTGCTTC+TGG | - | chr6.2:4473371-4473390 | None:intergenic | 40.0% | |
| CACCTATAAAAGCCTAAGGA+GGG | + | chr6.2:4472996-4473015 | MS.gene54737:intron | 40.0% | |
| CACTATGGAATGCAGAATAC+AGG | + | chr6.2:4471833-4471852 | MS.gene54737:CDS | 40.0% | |
| CGCTTTATGGCGTCTTAAAA+CGG | - | chr6.2:4472400-4472419 | None:intergenic | 40.0% | |
| GAAACAAGTAACCGATGAAG+AGG | - | chr6.2:4469787-4469806 | None:intergenic | 40.0% | |
| GAACCAAATTGGTGTAGTTC+AGG | + | chr6.2:4470949-4470968 | MS.gene54737:intron | 40.0% | |
| GAATCTGGAAATGTCACATG+CGG | + | chr6.2:4471870-4471889 | MS.gene54737:CDS | 40.0% | |
| GATAGGTGACTGAAATGTCT+CGG | + | chr6.2:4473778-4473797 | MS.gene54737:intron | 40.0% | |
| GGTGCACAAATGGTTGATTA+AGG | + | chr6.2:4471218-4471237 | MS.gene54737:intron | 40.0% | |
| TAGAACACGACAGAGGAATT+CGG | + | chr6.2:4473391-4473410 | MS.gene54737:CDS | 40.0% | |
| TAGAGTCGTATGTGATTAGG+AGG | + | chr6.2:4470979-4470998 | MS.gene54737:intron | 40.0% | |
| TGAATCTCTGACACAAACAC+CGG | - | chr6.2:4470494-4470513 | None:intergenic | 40.0% | |
| TGAATGTATTTCAGAGCCTG+AGG | - | chr6.2:4472054-4472073 | None:intergenic | 40.0% | |
| TGATTAGGAGGTCGAACATT+TGG | + | chr6.2:4470991-4471010 | MS.gene54737:intron | 40.0% | |
| TTAGAGGATTAATGTGAGGG+TGG | + | chr6.2:4471697-4471716 | MS.gene54737:intron | 40.0% | |
| TTAGGGTAGTTGTTCATGTG+TGG | + | chr6.2:4472969-4472988 | MS.gene54737:intron | 40.0% | |
| TTGAAGGAGTTAGGTGGAAA+AGG | + | chr6.2:4472518-4472537 | MS.gene54737:intron | 40.0% | |
| TTGCATCATTTCCTGCTTCT+GGG | - | chr6.2:4473370-4473389 | None:intergenic | 40.0% | |
| TTGCATTTGAGCTGTGTTGT+CGG | + | chr6.2:4474431-4474450 | MS.gene54737:CDS | 40.0% | |
| ! | AACAGAAGTTGTGACTTGTG+AGG | - | chr6.2:4473465-4473484 | None:intergenic | 40.0% |
| ! | AGTTCGCGTTTTTGTTGCTA+TGG | + | chr6.2:4472135-4472154 | MS.gene54737:intron | 40.0% |
| ! | GTCTGAGTTGACAAACATGA+AGG | + | chr6.2:4472083-4472102 | MS.gene54737:CDS | 40.0% |
| ! | TGAGTTGACAAACATGAAGG+AGG | + | chr6.2:4472086-4472105 | MS.gene54737:CDS | 40.0% |
| ! | TGATTTGGGGTTAGCGAATT+TGG | + | chr6.2:4471981-4472000 | MS.gene54737:CDS | 40.0% |
| ! | TTGTGAGGCATTACCATATC+AGG | - | chr6.2:4473450-4473469 | None:intergenic | 40.0% |
| !! | CGAAGCTAGCTCTAACTTTA+TGG | + | chr6.2:4473872-4473891 | MS.gene54737:CDS | 40.0% |
| !! | GATATTGACTACGCTGGTTT+GGG | + | chr6.2:4472495-4472514 | MS.gene54737:intron | 40.0% |
| !! | GGGGAAGTAAGTTCTGAAAT+TGG | + | chr6.2:4471365-4471384 | MS.gene54737:intron | 40.0% |
| !! | TACGGTACCTGAAGTTTTGT+TGG | - | chr6.2:4470661-4470680 | None:intergenic | 40.0% |
| !! | TCGATCGGTGTTTTTGATTG+TGG | + | chr6.2:4472341-4472360 | MS.gene54737:intron | 40.0% |
| !! | TGTGTTTGGTTCTGTAGTAC+TGG | + | chr6.2:4470128-4470147 | MS.gene54737:intron | 40.0% |
| !! | TTTGGTTCTGTAGTACCGAA+AGG | + | chr6.2:4470132-4470151 | MS.gene54737:intron | 40.0% |
| !! | TTTGGTTCTGTAGTACTGGA+AGG | + | chr6.2:4470342-4470361 | MS.gene54737:intron | 40.0% |
| !!! | ACCAGTACAGCATTTTTTGG+TGG | + | chr6.2:4471533-4471552 | MS.gene54737:intron | 40.0% |
| !!! | ACCTAGCAAAGTTGCTTTTC+TGG | + | chr6.2:4473979-4473998 | MS.gene54737:CDS | 40.0% |
| !!! | GTGCTATTTTTCTCGATACG+CGG | + | chr6.2:4473642-4473661 | MS.gene54737:intron | 40.0% |
| !!! | TGCACCAGTACAGCATTTTT+TGG | + | chr6.2:4471530-4471549 | MS.gene54737:intron | 40.0% |
| !!! | TGGTTGTTGCTGTTTTCGTT+AGG | + | chr6.2:4471806-4471825 | MS.gene54737:intron | 40.0% |
| AACTCATCACCATCATCGTC+CGG | - | chr6.2:4473930-4473949 | None:intergenic | 45.0% | |
| AATACAGGATGTCCTTGACG+AGG | + | chr6.2:4471848-4471867 | MS.gene54737:CDS | 45.0% | |
| AATGTCACATGCGGATCAAG+GGG | + | chr6.2:4471879-4471898 | MS.gene54737:CDS | 45.0% | |
| ATGTATTTCAGAGCCTGAGG+CGG | - | chr6.2:4472051-4472070 | None:intergenic | 45.0% | |
| CAACTACCCTAAGCGTGTTT+AGG | - | chr6.2:4472961-4472980 | None:intergenic | 45.0% | |
| CATTTCCAGATTCCTCGTCA+AGG | - | chr6.2:4471863-4471882 | None:intergenic | 45.0% | |
| CCAAATTGGTGTAGTTCAGG+TGG | + | chr6.2:4470952-4470971 | MS.gene54737:intron | 45.0% | |
| CCACCTGAACTACACCAATT+TGG | - | chr6.2:4470955-4470974 | None:intergenic | 45.0% | |
| CGCCGCTATTTGACAATACT+TGG | - | chr6.2:4473500-4473519 | None:intergenic | 45.0% | |
| CGTGTTAGTAGTGTTGTGTC+CGG | + | chr6.2:4470472-4470491 | MS.gene54737:intron | 45.0% | |
| GAAATGTCACATGCGGATCA+AGG | + | chr6.2:4471877-4471896 | MS.gene54737:CDS | 45.0% | |
| GAGGTCAATCAACCTGTTGA+CGG | + | chr6.2:4471504-4471523 | MS.gene54737:intron | 45.0% | |
| GGAAGGACACTTCTGATAGA+AGG | + | chr6.2:4470359-4470378 | MS.gene54737:intron | 45.0% | |
| GGGTTGTGCAAAACATCCTA+CGG | + | chr6.2:4471444-4471463 | MS.gene54737:intron | 45.0% | |
| GTGGGATGGAAAGAGATAGA+GGG | + | chr6.2:4471423-4471442 | MS.gene54737:intron | 45.0% | |
| GTTGGTTATCGGTGCACAAA+TGG | + | chr6.2:4471208-4471227 | MS.gene54737:intron | 45.0% | |
| TATCGGGTGAATTGCTCCTA+TGG | + | chr6.2:4472240-4472259 | MS.gene54737:intron | 45.0% | |
| TCGCTCTTTCGATCCTGATA+TGG | + | chr6.2:4473434-4473453 | MS.gene54737:CDS | 45.0% | |
| TCTTCCACTGCCATCTGTTA+TGG | + | chr6.2:4472470-4472489 | MS.gene54737:intron | 45.0% | |
| TGGGATGGAAAGAGATAGAG+GGG | + | chr6.2:4471424-4471443 | MS.gene54737:intron | 45.0% | |
| TGTGGGATGGAAAGAGATAG+AGG | + | chr6.2:4471422-4471441 | MS.gene54737:intron | 45.0% | |
| TTCACCTCCAAACTCTCCAA+AGG | - | chr6.2:4471919-4471938 | None:intergenic | 45.0% | |
| TTGGAGAGTTTGGAGGTGAA+GGG | + | chr6.2:4471919-4471938 | MS.gene54737:CDS | 45.0% | |
| TTTGGAGAGTTTGGAGGTGA+AGG | + | chr6.2:4471918-4471937 | MS.gene54737:CDS | 45.0% | |
| ! | ATGGACGATATTGACTACGC+TGG | + | chr6.2:4472489-4472508 | MS.gene54737:intron | 45.0% |
| ! | ATTCAATCAAGGCACCTCCT+TGG | - | chr6.2:4472208-4472227 | None:intergenic | 45.0% |
| ! | CGATATTGACTACGCTGGTT+TGG | + | chr6.2:4472494-4472513 | MS.gene54737:intron | 45.0% |
| ! | TGAAACGCCTTTGGAGAGTT+TGG | + | chr6.2:4471909-4471928 | MS.gene54737:CDS | 45.0% |
| !! | AGTTTTGTAGTGGAGTGTGG+AGG | + | chr6.2:4470896-4470915 | MS.gene54737:intron | 45.0% |
| !! | GAGATAACGGAGTTATCGAG+AGG | - | chr6.2:4469655-4469674 | None:intergenic | 45.0% |
| !! | TGGTTTGGGTTGAAGGAGTT+AGG | + | chr6.2:4472509-4472528 | MS.gene54737:intron | 45.0% |
| !! | TTTGGGTTGAAGGAGTTAGG+TGG | + | chr6.2:4472512-4472531 | MS.gene54737:intron | 45.0% |
| AAGGGTGGTGAAGAGGAACA+TGG | + | chr6.2:4471937-4471956 | MS.gene54737:CDS | 50.0% | |
| ACTCATCACCATCATCGTCC+GGG | - | chr6.2:4473929-4473948 | None:intergenic | 50.0% | |
| AGAGTTCGAACATTGGGCAG+AGG | + | chr6.2:4470837-4470856 | MS.gene54737:intron | 50.0% | |
| AGGGTGGTGAAGAGGAACAT+GGG | + | chr6.2:4471938-4471957 | MS.gene54737:CDS | 50.0% | |
| AGTGGAGTGTGGAGGATACT+TGG | + | chr6.2:4470904-4470923 | MS.gene54737:intron | 50.0% | |
| CAATAGTGCGGCAATGGTGT+GGG | + | chr6.2:4471405-4471424 | MS.gene54737:intron | 50.0% | |
| CTGAAATTGGAGAGGGATGC+AGG | + | chr6.2:4471378-4471397 | MS.gene54737:intron | 50.0% | |
| GAAACTTGCAGCAGCAGTAG+TGG | + | chr6.2:4472003-4472022 | MS.gene54737:CDS | 50.0% | |
| GATGTCCTTGACGAGGAATC+TGG | + | chr6.2:4471855-4471874 | MS.gene54737:CDS | 50.0% | |
| GCCTACTTGTGAAGGATGGT+GGG | - | chr6.2:4472431-4472450 | None:intergenic | 50.0% | |
| GGAACATGGGGAAACTGAGA+AGG | + | chr6.2:4471951-4471970 | MS.gene54737:CDS | 50.0% | |
| GTTGCAGCACTATGGCTTAG+TGG | + | chr6.2:4473519-4473538 | MS.gene54737:intron | 50.0% | |
| TCCTCCACTTCCTCTGATGA+CGG | - | chr6.2:4473804-4473823 | None:intergenic | 50.0% | |
| TCGTCCATAACAGATGGCAG+TGG | - | chr6.2:4472477-4472496 | None:intergenic | 50.0% | |
| TGACACCAAGCGCATGCAAT+TGG | - | chr6.2:4471601-4471620 | None:intergenic | 50.0% | |
| TGCTAGGTAATCGCGAGAAG+TGG | - | chr6.2:4473967-4473986 | None:intergenic | 50.0% | |
| TGTCACCAATTGCATGCGCT+TGG | + | chr6.2:4471593-4471612 | MS.gene54737:intron | 50.0% | |
| TGTGGCCTACTTGTGAAGGA+TGG | - | chr6.2:4472435-4472454 | None:intergenic | 50.0% | |
| ! | AAAGTGCAACGGTGCTGGAA+TGG | + | chr6.2:4471472-4471491 | MS.gene54737:intron | 50.0% |
| ! | AACGCCTTTGGAGAGTTTGG+AGG | + | chr6.2:4471912-4471931 | MS.gene54737:CDS | 50.0% |
| ! | AGTGGGGACTGGTAGGAAAA+TGG | + | chr6.2:4471256-4471275 | MS.gene54737:intron | 50.0% |
| ! | ATTTTCCTACCAGTCCCCAC+TGG | - | chr6.2:4471257-4471276 | None:intergenic | 50.0% |
| ! | CACTGCGAAGAGCATAGAGA+TGG | - | chr6.2:4472678-4472697 | None:intergenic | 50.0% |
| ! | CTACGGTGACGAAAGTGCAA+CGG | + | chr6.2:4471461-4471480 | MS.gene54737:intron | 50.0% |
| ! | GCCCCTCCTTAGGCTTTTAT+AGG | - | chr6.2:4473001-4473020 | None:intergenic | 50.0% |
| ! | GTGGGGACTGGTAGGAAAAT+GGG | + | chr6.2:4471257-4471276 | MS.gene54737:intron | 50.0% |
| ! | TAAGACGCCATAAAGCGCCA+TGG | + | chr6.2:4472403-4472422 | MS.gene54737:intron | 50.0% |
| ! | TAGAGCTAGCTTCGTCGACA+AGG | - | chr6.2:4473866-4473885 | None:intergenic | 50.0% |
| ! | TTTTCCTACCAGTCCCCACT+GGG | - | chr6.2:4471256-4471275 | None:intergenic | 50.0% |
| !! | ACTACGCTGGTTTGGGTTGA+AGG | + | chr6.2:4472502-4472521 | MS.gene54737:intron | 50.0% |
| AATGTCTCGGCCGTCATCAG+AGG | + | chr6.2:4473791-4473810 | MS.gene54737:CDS | 55.0% | |
| ACTGGTGCACTACCGTCAAC+AGG | - | chr6.2:4471519-4471538 | None:intergenic | 55.0% | |
| AGTTCCAACCAGCCAAGCCT+CGG | - | chr6.2:4471329-4471348 | None:intergenic | 55.0% | |
| ATAGCGGCGTTGCAGCACTA+TGG | + | chr6.2:4473511-4473530 | MS.gene54737:intron | 55.0% | |
| CGTTGCACTTTCGTCACCGT+AGG | - | chr6.2:4471463-4471482 | None:intergenic | 55.0% | |
| GACTATCACCCGGACGATGA+TGG | + | chr6.2:4473918-4473937 | MS.gene54737:CDS | 55.0% | |
| GAGAGTTTGGAGGTGAAGGG+TGG | + | chr6.2:4471922-4471941 | MS.gene54737:CDS | 55.0% | |
| GCAATAGTGCGGCAATGGTG+TGG | + | chr6.2:4471404-4471423 | MS.gene54737:intron | 55.0% | |
| GCCCACCATCCTTCACAAGT+AGG | + | chr6.2:4472427-4472446 | MS.gene54737:intron | 55.0% | |
| GGAGTTGAATGCCCAGAAGC+AGG | + | chr6.2:4473356-4473375 | MS.gene54737:intron | 55.0% | |
| GGCCTACTTGTGAAGGATGG+TGG | - | chr6.2:4472432-4472451 | None:intergenic | 55.0% | |
| GGCTCAGACACGCACAAACA+CGG | - | chr6.2:4472892-4472911 | None:intergenic | 55.0% | |
| GGGTGGTGAAGAGGAACATG+GGG | + | chr6.2:4471939-4471958 | MS.gene54737:CDS | 55.0% | |
| TCGCTGTGGCCTACTTGTGA+AGG | - | chr6.2:4472439-4472458 | None:intergenic | 55.0% | |
| TTTCCTACCAGTCCCCACTG+GGG | - | chr6.2:4471255-4471274 | None:intergenic | 55.0% | |
| ! | CTTTGGAGATTTGCCGCCTC+AGG | + | chr6.2:4472035-4472054 | MS.gene54737:CDS | 55.0% |
| ! | GATGCAGGAGCGCAATAGTG+CGG | + | chr6.2:4471393-4471412 | MS.gene54737:intron | 55.0% |
| ! | TGACGAAAGTGCAACGGTGC+TGG | + | chr6.2:4471467-4471486 | MS.gene54737:intron | 55.0% |
| !! | AAAGCCTAAGGAGGGGCGTT+TGG | + | chr6.2:4473004-4473023 | MS.gene54737:intron | 55.0% |
| !! | GGCGGATTGTGAAACGCCTT+TGG | + | chr6.2:4471900-4471919 | MS.gene54737:CDS | 55.0% |
| AGGAAGCTAGGCTACCCCAG+TGG | + | chr6.2:4471238-4471257 | MS.gene54737:intron | 60.0% | |
| AGTAGTGGCGCGGGAGTCTT+TGG | + | chr6.2:4472018-4472037 | MS.gene54737:CDS | 60.0% | |
| AGTGCGGCAATGGTGTGGGA+TGG | + | chr6.2:4471409-4471428 | MS.gene54737:intron | 60.0% | |
| CCTCGGCCAACATCACACTC+GGG | - | chr6.2:4471312-4471331 | None:intergenic | 60.0% | |
| CTCGGCCAACATCACACTCG+GGG | - | chr6.2:4471311-4471330 | None:intergenic | 60.0% | |
| GAAGCTAGGCTACCCCAGTG+GGG | + | chr6.2:4471240-4471259 | MS.gene54737:intron | 60.0% | |
| GCCGTCATCAGAGGAAGTGG+AGG | + | chr6.2:4473800-4473819 | MS.gene54737:CDS | 60.0% | |
| GCCTCGGCCAACATCACACT+CGG | - | chr6.2:4471313-4471332 | None:intergenic | 60.0% | |
| GCTGGAATGGCACTGTGACG+AGG | + | chr6.2:4471485-4471504 | MS.gene54737:intron | 60.0% | |
| GCTTCCAAACGCCCCTCCTT+AGG | - | chr6.2:4473011-4473030 | None:intergenic | 60.0% | |
| GGAAGCTAGGCTACCCCAGT+GGG | + | chr6.2:4471239-4471258 | MS.gene54737:intron | 60.0% | |
| GGACACCCCGAGTGTGATGT+TGG | + | chr6.2:4471303-4471322 | MS.gene54737:intron | 60.0% | |
| GGAGCGCAATAGTGCGGCAA+TGG | + | chr6.2:4471399-4471418 | MS.gene54737:intron | 60.0% | |
| GGAGGTGAAGGGTGGTGAAG+AGG | + | chr6.2:4471930-4471949 | MS.gene54737:CDS | 60.0% | |
| GTCACATGCGGATCAAGGGG+CGG | + | chr6.2:4471882-4471901 | MS.gene54737:CDS | 60.0% | |
| GTGTGATGTTGGCCGAGGCT+TGG | + | chr6.2:4471314-4471333 | MS.gene54737:intron | 60.0% | |
| TCGGCCGTCATCAGAGGAAG+TGG | + | chr6.2:4473797-4473816 | MS.gene54737:CDS | 60.0% | |
| TTGCAGCAGCAGTAGTGGCG+CGG | + | chr6.2:4472008-4472027 | MS.gene54737:CDS | 60.0% | |
| CCCGAGTGTGATGTTGGCCG+AGG | + | chr6.2:4471309-4471328 | MS.gene54737:intron | 65.0% | |
| GATGTTGGCCGAGGCTTGGC+TGG | + | chr6.2:4471318-4471337 | MS.gene54737:intron | 65.0% | |
| GTGGGCGCCATGGCGCTTTA+TGG | - | chr6.2:4472413-4472432 | None:intergenic | 65.0% | |
| TAGGCTACCCCAGTGGGGAC+TGG | + | chr6.2:4471245-4471264 | MS.gene54737:intron | 65.0% | |
| TGCAGCAGCAGTAGTGGCGC+GGG | + | chr6.2:4472009-4472028 | MS.gene54737:CDS | 65.0% | |
| TTGGCCGAGGCTTGGCTGGT+TGG | + | chr6.2:4471322-4471341 | MS.gene54737:intron | 65.0% | |
| ! | CTACCCCAGTGGGGACTGGT+AGG | + | chr6.2:4471249-4471268 | MS.gene54737:intron | 65.0% |
| !! | GTGAAGGATGGTGGGCGCCA+TGG | - | chr6.2:4472423-4472442 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 4469634 | 4474463 | 4469634 | ID=MS.gene54737 |
| chr6.2 | mRNA | 4469634 | 4474463 | 4469634 | ID=MS.gene54737.t1;Parent=MS.gene54737 |
| chr6.2 | exon | 4469634 | 4469821 | 4469634 | ID=MS.gene54737.t1.exon1;Parent=MS.gene54737.t1 |
| chr6.2 | CDS | 4469634 | 4469821 | 4469634 | ID=cds.MS.gene54737.t1;Parent=MS.gene54737.t1 |
| chr6.2 | exon | 4471828 | 4472107 | 4471828 | ID=MS.gene54737.t1.exon2;Parent=MS.gene54737.t1 |
| chr6.2 | CDS | 4471828 | 4472107 | 4471828 | ID=cds.MS.gene54737.t1;Parent=MS.gene54737.t1 |
| chr6.2 | exon | 4473357 | 4473455 | 4473357 | ID=MS.gene54737.t1.exon3;Parent=MS.gene54737.t1 |
| chr6.2 | CDS | 4473357 | 4473455 | 4473357 | ID=cds.MS.gene54737.t1;Parent=MS.gene54737.t1 |
| chr6.2 | exon | 4473783 | 4474000 | 4473783 | ID=MS.gene54737.t1.exon4;Parent=MS.gene54737.t1 |
| chr6.2 | CDS | 4473783 | 4474000 | 4473783 | ID=cds.MS.gene54737.t1;Parent=MS.gene54737.t1 |
| chr6.2 | exon | 4474388 | 4474463 | 4474388 | ID=MS.gene54737.t1.exon5;Parent=MS.gene54737.t1 |
| chr6.2 | CDS | 4474388 | 4474463 | 4474388 | ID=cds.MS.gene54737.t1;Parent=MS.gene54737.t1 |
| Gene Sequence |
| Protein sequence |
