Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56178.t1 | XP_003588448.1 | 99.2 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 4.60E-57 | 230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56178.t1 | Q02921 | 65.0 | 80 | 28 | 0 | 26 | 105 | 17 | 96 | 6.0e-21 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56178.t1 | G7I281 | 99.2 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 3.3e-57 | 230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050288 | MS.gene56178 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene56178 | 0.848556 | 5.68E-60 | -1.69E-46 |
| MS.gene050955 | MS.gene56178 | 0.819876 | 9.23E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene56178 | 0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene56178 | 0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene051756 | MS.gene56178 | 0.816106 | 6.56E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene56178 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene56178 | -0.825754 | 3.95E-54 | -1.69E-46 |
| MS.gene052370 | MS.gene56178 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene052818 | MS.gene56178 | -0.806914 | 6.53E-50 | -1.69E-46 |
| MS.gene053045 | MS.gene56178 | 0.814895 | 1.22E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene56178 | 0.848513 | 5.84E-60 | -1.69E-46 |
| MS.gene05469 | MS.gene56178 | 0.801251 | 9.83E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene56178 | 0.808123 | 3.62E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene56178 | 0.853876 | 1.79E-61 | -1.69E-46 |
| MS.gene059360 | MS.gene56178 | 0.809471 | 1.86E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56178.t1 | MTR_1g007360 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 1.32e-85 | 245 |
| MS.gene56178.t1 | MTR_3g110390 | 68.376 | 117 | 35 | 2 | 1 | 115 | 1 | 117 | 3.20e-54 | 166 |
| MS.gene56178.t1 | MTR_3g110390 | 67.521 | 117 | 35 | 3 | 1 | 115 | 1 | 116 | 1.39e-51 | 159 |
| MS.gene56178.t1 | MTR_4g113820 | 58.750 | 80 | 33 | 0 | 26 | 105 | 21 | 100 | 1.06e-24 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56178.t1 | AT5G25940 | 68.041 | 97 | 29 | 1 | 14 | 108 | 12 | 108 | 3.60e-29 | 102 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAATTAAAGTACAAA+AGG | - | 8631:17465-17484 | None:intergenic | 10.0% |
| !! | TAAACAAAAACAAAAAATTT+GGG | - | 8631:15163-15182 | None:intergenic | 10.0% |
| !! | TTAAACAAAAACAAAAAATT+TGG | - | 8631:15164-15183 | None:intergenic | 10.0% |
| !!! | AATAATAAATGAATTTCTTT+TGG | - | 8631:15043-15062 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAAAGAAAAAAAA+GGG | - | 8631:17508-17527 | None:intergenic | 10.0% |
| !!! | TAAAATGTTATTTATTATGT+GGG | + | 8631:15185-15204 | MS.gene56178:intron | 10.0% |
| !!! | TATTTTTTGAAAGAAAAAAA+AGG | - | 8631:17509-17528 | None:intergenic | 10.0% |
| !!! | TTAAAATGTTATTTATTATG+TGG | + | 8631:15184-15203 | MS.gene56178:intron | 10.0% |
| !!! | TTTAATTTTATTTGATGTTA+AGG | + | 8631:16958-16977 | MS.gene56178:intron | 10.0% |
| !! | AAATCAATGTTAAACTTTAT+TGG | + | 8631:15778-15797 | MS.gene56178:intron | 15.0% |
| !! | AATAAAATTAAAACTCATGA+AGG | - | 8631:16950-16969 | None:intergenic | 15.0% |
| !! | ATAAAATTAAAACTCATGAA+GGG | - | 8631:16949-16968 | None:intergenic | 15.0% |
| !! | ATTGATAAAAATGAAAATCT+AGG | - | 8631:16034-16053 | None:intergenic | 15.0% |
| !!! | AATTTATTAGTTGATGATTA+TGG | + | 8631:15250-15269 | MS.gene56178:intron | 15.0% |
| !!! | AGAAAAATAAATCTTTTGAA+TGG | + | 8631:17142-17161 | MS.gene56178:intron | 15.0% |
| !!! | AGAAAGTTAAGATTTTAATT+TGG | - | 8631:17320-17339 | None:intergenic | 15.0% |
| !!! | TCTTAATCATACTTTTAATT+GGG | - | 8631:16848-16867 | None:intergenic | 15.0% |
| !!! | TTCTTAATCATACTTTTAAT+TGG | - | 8631:16849-16868 | None:intergenic | 15.0% |
| !! | AAAGAAAAATTACTTACTGT+TGG | - | 8631:16233-16252 | None:intergenic | 20.0% |
| !! | CAGAAATAAAGACAATTATT+TGG | - | 8631:16008-16027 | None:intergenic | 20.0% |
| !! | TAAAATTAAAACTCATGAAG+GGG | - | 8631:16948-16967 | None:intergenic | 20.0% |
| !! | TTATTGTTGAAAATAACACT+GGG | + | 8631:16912-16931 | MS.gene56178:intron | 20.0% |
| !!! | AATACCATTAGTACATTTTT+TGG | - | 8631:15100-15119 | None:intergenic | 20.0% |
| !!! | AATTTTTTTGGTTAGGATTT+GGG | + | 8631:15504-15523 | MS.gene56178:intron | 20.0% |
| !!! | ATTTTCTCAAATTATTGCTA+TGG | + | 8631:15933-15952 | MS.gene56178:intron | 20.0% |
| !!! | TTTAAGACATTGGTTTTTTA+CGG | + | 8631:16437-16456 | MS.gene56178:intron | 20.0% |
| ! | ACCAAAAAAATTCAGAATGT+TGG | - | 8631:15496-15515 | None:intergenic | 25.0% |
| ! | AGAACCAAAAAATGTACTAA+TGG | + | 8631:15093-15112 | MS.gene56178:CDS | 25.0% |
| ! | CTTAAAAAACATGTAACAAG+AGG | - | 8631:16504-16523 | None:intergenic | 25.0% |
| ! | GATGTTCAATCTTATAAGAT+CGG | - | 8631:16762-16781 | None:intergenic | 25.0% |
| ! | GTTATTGTTGAAAATAACAC+TGG | + | 8631:16911-16930 | MS.gene56178:intron | 25.0% |
| ! | GTTGGAAAATAATTCTTGAA+TGG | + | 8631:15716-15735 | MS.gene56178:intron | 25.0% |
| ! | TAACAATGTTAGATAACATG+TGG | - | 8631:16072-16091 | None:intergenic | 25.0% |
| ! | TTCATATTTCTCATGATATC+AGG | - | 8631:16115-16134 | None:intergenic | 25.0% |
| ! | TTTGAATGCATTATTTACAC+TGG | + | 8631:17565-17584 | MS.gene56178:intron | 25.0% |
| ! | TTTGAATGGTAATTTAAGCA+TGG | + | 8631:17156-17175 | MS.gene56178:intron | 25.0% |
| !! | CAGTAAGTAATTTTTCTTTC+CGG | + | 8631:16234-16253 | MS.gene56178:intron | 25.0% |
| !! | TTCAAGAATTATTTTCCAAC+AGG | - | 8631:15716-15735 | None:intergenic | 25.0% |
| !!! | ATAAGAATTTGTTAATGTGC+TGG | - | 8631:17227-17246 | None:intergenic | 25.0% |
| !!! | CATTCTGAATTTTTTTGGTT+AGG | + | 8631:15497-15516 | MS.gene56178:intron | 25.0% |
| !!! | CATTGTTTTTCTTCGAATTT+GGG | - | 8631:15663-15682 | None:intergenic | 25.0% |
| !!! | GAATTTTTTTGGTTAGGATT+TGG | + | 8631:15503-15522 | MS.gene56178:intron | 25.0% |
| !!! | GTTAAGATTTTAATTTGGAG+TGG | - | 8631:17315-17334 | None:intergenic | 25.0% |
| !!! | TGTTACATGTTTTTTAAGAG+TGG | + | 8631:16506-16525 | MS.gene56178:intron | 25.0% |
| !!! | TTAAGACATTGGTTTTTTAC+GGG | + | 8631:16438-16457 | MS.gene56178:intron | 25.0% |
| !!! | TTCATTTTTATCAATAGAGC+AGG | + | 8631:16039-16058 | MS.gene56178:intron | 25.0% |
| AATTCACTGAAGTATGAATG+TGG | + | 8631:17270-17289 | MS.gene56178:intron | 30.0% | |
| ACCAACTAATCAACTAATCT+AGG | + | 8631:15325-15344 | MS.gene56178:intron | 30.0% | |
| CAATAAGCAGAAGAAATACA+TGG | - | 8631:16372-16391 | None:intergenic | 30.0% | |
| CATGTATTTCTTCTGCTTAT+TGG | + | 8631:16370-16389 | MS.gene56178:intron | 30.0% | |
| CCAAATTCGAAGAAAAACAA+TGG | + | 8631:15661-15680 | MS.gene56178:intron | 30.0% | |
| CCAACTAATCAACTAATCTA+GGG | + | 8631:15326-15345 | MS.gene56178:intron | 30.0% | |
| GAAGCAAGAAACAATAAATC+AGG | + | 8631:17198-17217 | MS.gene56178:intron | 30.0% | |
| GTAAAATAGTGATAGGAACT+TGG | - | 8631:16720-16739 | None:intergenic | 30.0% | |
| TATCTTTATTAGCAAGTCTC+CGG | - | 8631:16256-16275 | None:intergenic | 30.0% | |
| TCTTATAAGATTGAACATCC+TGG | + | 8631:16763-16782 | MS.gene56178:intron | 30.0% | |
| TGTGAAATTGACCAATCATA+TGG | + | 8631:16574-16593 | MS.gene56178:intron | 30.0% | |
| TGTTATGATATGCTGTCAAA+GGG | + | 8631:16087-16106 | MS.gene56178:intron | 30.0% | |
| TTGTTATGATATGCTGTCAA+AGG | + | 8631:16086-16105 | MS.gene56178:intron | 30.0% | |
| ! | ATTTTCCAACAGGAACAAAA+GGG | - | 8631:15706-15725 | None:intergenic | 30.0% |
| ! | TATTTTCCAACAGGAACAAA+AGG | - | 8631:15707-15726 | None:intergenic | 30.0% |
| ! | TTAGTTGATTAGTTGGTTCT+TGG | - | 8631:15322-15341 | None:intergenic | 30.0% |
| !! | AACAATGTTATGCTGTTTCA+TGG | + | 8631:16320-16339 | MS.gene56178:intron | 30.0% |
| !! | AACTTTATTGGACTAGCTTA+AGG | + | 8631:15790-15809 | MS.gene56178:intron | 30.0% |
| !! | AGTTTTCTTCTTTGTTGCTT+CGG | + | 8631:17421-17440 | MS.gene56178:intron | 30.0% |
| !! | CCATTGTTTTTCTTCGAATT+TGG | - | 8631:15664-15683 | None:intergenic | 30.0% |
| !! | CTTGGTCTTATTAAAGAACA+AGG | - | 8631:16702-16721 | None:intergenic | 30.0% |
| !! | TAGTTGATGATTATGGTTAG+AGG | + | 8631:15257-15276 | MS.gene56178:intron | 30.0% |
| !! | TATTTTACTTTTCCGCTGTT+TGG | + | 8631:15753-15772 | MS.gene56178:intron | 30.0% |
| !! | TTATGGTTAGAGGTATTTGT+TGG | + | 8631:15267-15286 | MS.gene56178:intron | 30.0% |
| !!! | GCCAACATTCTGAATTTTTT+TGG | + | 8631:15492-15511 | MS.gene56178:intron | 30.0% |
| !!! | GGTTGATGATTTTTTCTGTT+CGG | + | 8631:15288-15307 | MS.gene56178:intron | 30.0% |
| !!! | GTATTTCATGAACTAGCTTT+TGG | + | 8631:15553-15572 | MS.gene56178:intron | 30.0% |
| AAAATCTTCCTCTCTTCATC+AGG | - | 8631:15072-15091 | None:intergenic | 35.0% | |
| ACACTAAAAGAGGTTTCAGA+AGG | - | 8631:16810-16829 | None:intergenic | 35.0% | |
| ACCTTCTGCATATCAAGAAA+AGG | - | 8631:16159-16178 | None:intergenic | 35.0% | |
| ACTGAATGCATCGAAAACAA+AGG | - | 8631:17404-17423 | None:intergenic | 35.0% | |
| ATTGTTCTTCAACACAAACC+AGG | - | 8631:16784-16803 | None:intergenic | 35.0% | |
| CACTGCTGATAAAACTATCT+TGG | + | 8631:17628-17647 | MS.gene56178:CDS | 35.0% | |
| CCATTATCATCCACAAACAT+CGG | - | 8631:16891-16910 | None:intergenic | 35.0% | |
| CGATGTTTGTGGATGATAAT+GGG | + | 8631:16889-16908 | MS.gene56178:intron | 35.0% | |
| CTCTGTAGTGTTGTAATCAA+GGG | + | 8631:16670-16689 | MS.gene56178:intron | 35.0% | |
| GCAAAAAGAGTCAAACTGAA+TGG | - | 8631:17539-17558 | None:intergenic | 35.0% | |
| GCTAGTTCATGAAATACAAG+TGG | - | 8631:15550-15569 | None:intergenic | 35.0% | |
| TGGTGAAAGAATGTCTTTCA+GGG | + | 8631:16411-16430 | MS.gene56178:intron | 35.0% | |
| TTCAGAACTTAGAGATGCTT+GGG | + | 8631:15014-15033 | MS.gene56178:CDS | 35.0% | |
| TTCTCTATCAAACATCACGT+TGG | - | 8631:16540-16559 | None:intergenic | 35.0% | |
| TTGAATGTAACCACAAGTGT+CGG | - | 8631:15905-15924 | None:intergenic | 35.0% | |
| TTGGTGAAAGAATGTCTTTC+AGG | + | 8631:16410-16429 | MS.gene56178:intron | 35.0% | |
| TTTAATTGGGTTTCAGAAGC+TGG | - | 8631:16835-16854 | None:intergenic | 35.0% | |
| TTTCACCAATTATGCAGACA+TGG | - | 8631:16399-16418 | None:intergenic | 35.0% | |
| ! | AAGGTAATGCATGTTTTCCA+TGG | + | 8631:15809-15828 | MS.gene56178:intron | 35.0% |
| ! | AATTGCTACTTGATGCATGT+TGG | - | 8631:16480-16499 | None:intergenic | 35.0% |
| ! | AGGTAATGCATGTTTTCCAT+GGG | + | 8631:15810-15829 | MS.gene56178:intron | 35.0% |
| ! | AGGTCTTCAAATTTTGCAGT+TGG | + | 8631:16978-16997 | MS.gene56178:intron | 35.0% |
| ! | ATCGAAAACAAAGGAAGCAT+AGG | - | 8631:17395-17414 | None:intergenic | 35.0% |
| ! | CCCTAGATTAGTTGATTAGT+TGG | - | 8631:15329-15348 | None:intergenic | 35.0% |
| ! | GCATTATTTACACTGGTTGT+TGG | + | 8631:17572-17591 | MS.gene56178:intron | 35.0% |
| ! | TATTTACACTGGTTGTTGGT+TGG | + | 8631:17576-17595 | MS.gene56178:intron | 35.0% |
| ! | TTTCTTCGAATTTGGGTTCT+AGG | - | 8631:15656-15675 | None:intergenic | 35.0% |
| !! | GTAAGGAGCAAACCATTTTT+CGG | + | 8631:17366-17385 | MS.gene56178:intron | 35.0% |
| !! | TAAGGAGCAAACCATTTTTC+GGG | + | 8631:17367-17386 | MS.gene56178:intron | 35.0% |
| !!! | ACATTGATTTTGCCAAACAG+CGG | - | 8631:15768-15787 | None:intergenic | 35.0% |
| !!! | GATTTTTTCTGTTCGGTATC+CGG | + | 8631:15295-15314 | MS.gene56178:intron | 35.0% |
| !!! | GTATTTCTTGAGCTAGCTTT+TGG | + | 8631:15618-15637 | MS.gene56178:intron | 35.0% |
| AAACCTCAATTATACCGCTC+AGG | + | 8631:17032-17051 | MS.gene56178:CDS | 40.0% | |
| ACAAAGCAAGGAAGACTGAA+GGG | - | 8631:17348-17367 | None:intergenic | 40.0% | |
| AGATATGATAAGTGCCTGAG+CGG | - | 8631:17049-17068 | None:intergenic | 40.0% | |
| AGCAACAAAACCACATGGAT+TGG | - | 8631:15465-15484 | None:intergenic | 40.0% | |
| ATTATTGCTATGGTCGCGTA+TGG | + | 8631:15943-15962 | MS.gene56178:intron | 40.0% | |
| CAAGAAAAGGCTAAAGCGTA+AGG | - | 8631:16146-16165 | None:intergenic | 40.0% | |
| CCGATGTTTGTGGATGATAA+TGG | + | 8631:16888-16907 | MS.gene56178:intron | 40.0% | |
| CGTTCGGGTAAAATAGTGAT+AGG | - | 8631:16727-16746 | None:intergenic | 40.0% | |
| CTACACCTCTAAATGCCTAA+GGG | - | 8631:16640-16659 | None:intergenic | 40.0% | |
| CTTCAGAACTTAGAGATGCT+TGG | + | 8631:15013-15032 | MS.gene56178:CDS | 40.0% | |
| GAAGCTGGTAACACTAAAAG+AGG | - | 8631:16820-16839 | None:intergenic | 40.0% | |
| GCTAGCTCAAGAAATACAAG+TGG | - | 8631:15615-15634 | None:intergenic | 40.0% | |
| GCTCTGTAGTGTTGTAATCA+AGG | + | 8631:16669-16688 | MS.gene56178:intron | 40.0% | |
| TACAAAGCAAGGAAGACTGA+AGG | - | 8631:17349-17368 | None:intergenic | 40.0% | |
| TATCATCCACAAACATCGGA+GGG | - | 8631:16887-16906 | None:intergenic | 40.0% | |
| TCAGTCTTCCTTGCTTTGTA+AGG | + | 8631:17349-17368 | MS.gene56178:intron | 40.0% | |
| TCGAATCAGCCAACTTATGT+GGG | - | 8631:15389-15408 | None:intergenic | 40.0% | |
| TCTACACCTCTAAATGCCTA+AGG | - | 8631:16641-16660 | None:intergenic | 40.0% | |
| TGTCACGAACACCATATGAT+TGG | - | 8631:16588-16607 | None:intergenic | 40.0% | |
| TTAAGAGAGTTGTGTCCCTT+AGG | + | 8631:16622-16641 | MS.gene56178:intron | 40.0% | |
| TTATCATCCACAAACATCGG+AGG | - | 8631:16888-16907 | None:intergenic | 40.0% | |
| TTCGAATCAGCCAACTTATG+TGG | - | 8631:15390-15409 | None:intergenic | 40.0% | |
| ! | ACACCTTCAATCTGAAGTGT+TGG | - | 8631:15846-15865 | None:intergenic | 40.0% |
| ! | CAAGCATCTCTAAGTTCTGA+AGG | - | 8631:15015-15034 | None:intergenic | 40.0% |
| ! | GCCTTTTCTTGATATGCAGA+AGG | + | 8631:16155-16174 | MS.gene56178:intron | 40.0% |
| ! | TCATTCCCTTTTGTTCCTGT+TGG | + | 8631:15698-15717 | MS.gene56178:intron | 40.0% |
| ! | TGATTAGTTGGTTCTTGGAC+CGG | - | 8631:15317-15336 | None:intergenic | 40.0% |
| ! | TTGCGTTGGTGCTTCATAAT+TGG | + | 8631:15975-15994 | MS.gene56178:intron | 40.0% |
| !! | TTCAGGGCTCTTTAAGACAT+TGG | + | 8631:16427-16446 | MS.gene56178:intron | 40.0% |
| !!! | CTAGCTTTTGGAGTTGTGTT+AGG | + | 8631:15565-15584 | MS.gene56178:intron | 40.0% |
| !!! | TCGGTTTTGAGTACTACGTT+CGG | - | 8631:16743-16762 | None:intergenic | 40.0% |
| AAGATGAAACCGTGTCACGA+TGG | - | 8631:17697-17716 | None:intergenic | 45.0% | |
| AAGCATAGGAGCCCGAAAAA+TGG | - | 8631:17381-17400 | None:intergenic | 45.0% | |
| ACCCAGAGCAAAGCTCTATA+GGG | + | 8631:15358-15377 | MS.gene56178:intron | 45.0% | |
| CAGGCACTTATCATATCTGC+TGG | + | 8631:17051-17070 | MS.gene56178:CDS | 45.0% | |
| CTTAGAGCGTACTCCTGTTA+AGG | - | 8631:15420-15439 | None:intergenic | 45.0% | |
| GCACCAACACTTCAGATTGA+AGG | + | 8631:15840-15859 | MS.gene56178:intron | 45.0% | |
| GCTCAAGCAACAAAACCACA+TGG | - | 8631:15470-15489 | None:intergenic | 45.0% | |
| GGTGTCCATGTCTGCATAAT+TGG | + | 8631:16391-16410 | MS.gene56178:intron | 45.0% | |
| TATGGTGTCCATGTTTGCGT+TGG | + | 8631:15961-15980 | MS.gene56178:intron | 45.0% | |
| TCCCTATAGAGCTTTGCTCT+GGG | - | 8631:15362-15381 | None:intergenic | 45.0% | |
| TGCTGTTCGCATGATTCCAT+GGG | + | 8631:17002-17021 | MS.gene56178:CDS | 45.0% | |
| TGTGTCCCTTAGGCATTTAG+AGG | + | 8631:16632-16651 | MS.gene56178:intron | 45.0% | |
| TTCGAACCTGAGACCTTAAC+AGG | + | 8631:15404-15423 | MS.gene56178:intron | 45.0% | |
| TTGCTTCTCCTGATGAAGAG+AGG | + | 8631:15061-15080 | MS.gene56178:CDS | 45.0% | |
| ! | ATGAAGCACCAACGCAAACA+TGG | - | 8631:15972-15991 | None:intergenic | 45.0% |
| ! | CTTAACAGGAGTACGCTCTA+AGG | + | 8631:15418-15437 | MS.gene56178:intron | 45.0% |
| ! | CTTCAGATTGAAGGTGTGTC+CGG | + | 8631:15849-15868 | MS.gene56178:intron | 45.0% |
| ! | GGTTTGCTCCTTACAAAGCA+AGG | - | 8631:17360-17379 | None:intergenic | 45.0% |
| ! | TATAGAGCTTTGCTCTGGGT+GGG | - | 8631:15358-15377 | None:intergenic | 45.0% |
| ! | TGCTACTTGATGCATGTTGG+TGG | - | 8631:16477-16496 | None:intergenic | 45.0% |
| !! | AGTACTGACAACGCATGCAA+CGG | - | 8631:16207-16226 | None:intergenic | 45.0% |
| !!! | CGGTTTTGAGTACTACGTTC+GGG | - | 8631:16742-16761 | None:intergenic | 45.0% |
| CACCCAGAGCAAAGCTCTAT+AGG | + | 8631:15357-15376 | MS.gene56178:intron | 50.0% | |
| CGTACTCCTGTTAAGGTCTC+AGG | - | 8631:15413-15432 | None:intergenic | 50.0% | |
| CTGCTGTTCGCATGATTCCA+TGG | + | 8631:17001-17020 | MS.gene56178:CDS | 50.0% | |
| GTCCCTATAGAGCTTTGCTC+TGG | - | 8631:15363-15382 | None:intergenic | 50.0% | |
| GTGCCTGAGCGGTATAATTG+AGG | - | 8631:17038-17057 | None:intergenic | 50.0% | |
| GTGTAACCCTCCGATGTTTG+TGG | + | 8631:16878-16897 | MS.gene56178:intron | 50.0% | |
| TCGCATGATTCCATGGGCAA+AGG | + | 8631:17008-17027 | MS.gene56178:CDS | 50.0% | |
| TTGAGGTTTGCCTTTGCCCA+TGG | - | 8631:17021-17040 | None:intergenic | 50.0% | |
| ! | ATAGAGCTTTGCTCTGGGTG+GGG | - | 8631:15357-15376 | None:intergenic | 50.0% |
| ! | CTATAGAGCTTTGCTCTGGG+TGG | - | 8631:15359-15378 | None:intergenic | 50.0% |
| ! | TCTGAGACACCATCGTGACA+CGG | + | 8631:17685-17704 | MS.gene56178:CDS | 50.0% |
| !! | AACCACATGGATTGGCTCGT+TGG | - | 8631:15457-15476 | None:intergenic | 50.0% |
| !! | AGGGACTAGCCCACATAAGT+TGG | + | 8631:15377-15396 | MS.gene56178:intron | 50.0% |
| !! | ATGGATTGGCTCGTTGGTGT+AGG | - | 8631:15451-15470 | None:intergenic | 50.0% |
| !! | TGTTGGTGCTACATAGCCCA+TGG | - | 8631:15829-15848 | None:intergenic | 50.0% |
| ACTGACAACGCATGCAACGG+CGG | - | 8631:16204-16223 | None:intergenic | 55.0% | |
| AGGTGTGCGTGCTGGATTCA+AGG | + | 8631:16175-16194 | MS.gene56178:CDS | 55.0% | |
| CAACACGACACCGACACTTG+TGG | + | 8631:15892-15911 | MS.gene56178:intron | 55.0% | |
| CACCAACGAGCCAATCCATG+TGG | + | 8631:15452-15471 | MS.gene56178:intron | 55.0% | |
| ! | TATGCAGAAGGTGTGCGTGC+TGG | + | 8631:16167-16186 | MS.gene56178:intron | 55.0% |
| !! | CACAAGTGTCGGTGTCGTGT+TGG | - | 8631:15894-15913 | None:intergenic | 55.0% |
| ACACGCGTCGTGTTGGACAC+CGG | - | 8631:15871-15890 | None:intergenic | 60.0% | |
| GTGTTGGACACGCGTCGTGT+TGG | - | 8631:15878-15897 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8631 | gene | 15003 | 17718 | 15003 | ID=MS.gene56178 |
| 8631 | mRNA | 15003 | 17718 | 15003 | ID=MS.gene56178.t1;Parent=MS.gene56178 |
| 8631 | exon | 15003 | 15114 | 15003 | ID=MS.gene56178.t1.exon1;Parent=MS.gene56178.t1 |
| 8631 | CDS | 15003 | 15114 | 15003 | ID=cds.MS.gene56178.t1;Parent=MS.gene56178.t1 |
| 8631 | exon | 16174 | 16235 | 16174 | ID=MS.gene56178.t1.exon2;Parent=MS.gene56178.t1 |
| 8631 | CDS | 16174 | 16235 | 16174 | ID=cds.MS.gene56178.t1;Parent=MS.gene56178.t1 |
| 8631 | exon | 16997 | 17072 | 16997 | ID=MS.gene56178.t1.exon3;Parent=MS.gene56178.t1 |
| 8631 | CDS | 16997 | 17072 | 16997 | ID=cds.MS.gene56178.t1;Parent=MS.gene56178.t1 |
| 8631 | exon | 17606 | 17718 | 17606 | ID=MS.gene56178.t1.exon4;Parent=MS.gene56178.t1 |
| 8631 | CDS | 17606 | 17718 | 17606 | ID=cds.MS.gene56178.t1;Parent=MS.gene56178.t1 |
| Gene Sequence |
| Protein sequence |
