Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58092.t1 | XP_003630201.2 | 96.9 | 579 | 18 | 0 | 1 | 579 | 67 | 645 | 0.00E+00 | 1152.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58092.t1 | Q498F0 | 34.4 | 355 | 186 | 10 | 136 | 444 | 482 | 835 | 2.6e-45 | 184.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58092.t1 | A0A0C3Y5Y4 | 96.9 | 579 | 18 | 0 | 1 | 579 | 67 | 645 | 0.0e+00 | 1152.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene58092 | 0.818858 | 1.57E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene58092 | 0.801014 | 1.10E-48 | -1.69E-46 |
| MS.gene050629 | MS.gene58092 | -0.818224 | 2.19E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene58092 | 0.872799 | 2.41E-67 | -1.69E-46 |
| MS.gene050763 | MS.gene58092 | 0.873761 | 1.14E-67 | -1.69E-46 |
| MS.gene051789 | MS.gene58092 | 0.801633 | 8.21E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene58092 | 0.810547 | 1.09E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene58092 | 0.812426 | 4.26E-51 | -1.69E-46 |
| MS.gene053811 | MS.gene58092 | 0.822176 | 2.72E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene58092 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene58092 | 0.805944 | 1.04E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene58092 | 0.800046 | 1.73E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene58092 | 0.867911 | 9.65E-66 | -1.69E-46 |
| MS.gene054468 | MS.gene58092 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene58092 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene58092 | -0.821037 | 5.00E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene58092 | 0.837466 | 5.11E-57 | -1.69E-46 |
| MS.gene057929 | MS.gene58092 | 0.834871 | 2.33E-56 | -1.69E-46 |
| MS.gene059664 | MS.gene58092 | 0.805067 | 1.60E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene58092 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene58092 | -0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene060404 | MS.gene58092 | 0.84294 | 1.90E-58 | -1.69E-46 |
| MS.gene060480 | MS.gene58092 | 0.806905 | 6.55E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene58092 | 0.801345 | 9.41E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene58092 | 0.809431 | 1.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54083 | MS.gene58092 | PPI |
| MS.gene021587 | MS.gene58092 | PPI |
| MS.gene58092 | MS.gene015906 | PPI |
| MS.gene86308 | MS.gene58092 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58092.t1 | MTR_8g092890 | 96.891 | 579 | 18 | 0 | 1 | 579 | 67 | 645 | 0.0 | 1157 |
| MS.gene58092.t1 | MTR_3g095780 | 61.698 | 530 | 162 | 8 | 78 | 579 | 112 | 628 | 0.0 | 581 |
| MS.gene58092.t1 | MTR_1g007740 | 39.630 | 540 | 229 | 12 | 107 | 576 | 194 | 706 | 8.11e-126 | 388 |
| MS.gene58092.t1 | MTR_3g491920 | 42.226 | 521 | 241 | 11 | 107 | 577 | 190 | 700 | 4.94e-125 | 384 |
| MS.gene58092.t1 | MTR_8g100005 | 39.511 | 491 | 239 | 7 | 134 | 579 | 237 | 714 | 3.37e-112 | 351 |
| MS.gene58092.t1 | MTR_2g079740 | 35.577 | 520 | 246 | 9 | 138 | 579 | 350 | 858 | 1.16e-90 | 298 |
| MS.gene58092.t1 | MTR_7g060420 | 39.481 | 385 | 182 | 3 | 130 | 463 | 383 | 767 | 2.32e-80 | 273 |
| MS.gene58092.t1 | MTR_8g100005 | 45.200 | 250 | 93 | 2 | 135 | 340 | 238 | 487 | 4.79e-67 | 226 |
| MS.gene58092.t1 | MTR_4g119620 | 27.273 | 286 | 179 | 9 | 156 | 433 | 19 | 283 | 1.47e-25 | 108 |
| MS.gene58092.t1 | MTR_1g072140 | 24.911 | 281 | 171 | 10 | 158 | 429 | 21 | 270 | 2.71e-18 | 86.7 |
| MS.gene58092.t1 | MTR_3g106080 | 26.554 | 177 | 107 | 6 | 161 | 334 | 458 | 614 | 1.67e-13 | 73.9 |
| MS.gene58092.t1 | MTR_8g037340 | 22.000 | 250 | 176 | 6 | 210 | 441 | 208 | 456 | 3.40e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58092.t1 | AT1G48870 | 44.111 | 467 | 205 | 9 | 128 | 576 | 162 | 590 | 1.26e-121 | 372 |
| MS.gene58092.t1 | AT1G48870 | 44.111 | 467 | 205 | 9 | 128 | 576 | 162 | 590 | 1.26e-121 | 372 |
| MS.gene58092.t1 | AT1G48870 | 44.111 | 467 | 205 | 9 | 128 | 576 | 162 | 590 | 1.26e-121 | 372 |
| MS.gene58092.t1 | AT5G24320 | 38.606 | 531 | 243 | 11 | 104 | 577 | 188 | 692 | 1.70e-113 | 353 |
| MS.gene58092.t1 | AT5G53500 | 40.535 | 523 | 230 | 14 | 107 | 577 | 159 | 652 | 1.99e-113 | 352 |
| MS.gene58092.t1 | AT5G53500 | 40.535 | 523 | 230 | 14 | 107 | 577 | 159 | 652 | 1.99e-113 | 352 |
| MS.gene58092.t1 | AT5G24320 | 38.318 | 535 | 243 | 12 | 104 | 577 | 188 | 696 | 6.72e-112 | 350 |
| MS.gene58092.t1 | AT5G42010 | 37.681 | 552 | 238 | 16 | 101 | 579 | 191 | 709 | 1.96e-102 | 325 |
| MS.gene58092.t1 | AT1G64610 | 38.140 | 527 | 236 | 14 | 104 | 579 | 160 | 647 | 2.85e-102 | 323 |
| MS.gene58092.t1 | AT1G64610 | 38.140 | 527 | 236 | 14 | 104 | 579 | 160 | 647 | 2.85e-102 | 323 |
| MS.gene58092.t1 | AT3G15470 | 37.795 | 508 | 239 | 10 | 138 | 579 | 387 | 883 | 5.75e-98 | 318 |
| MS.gene58092.t1 | AT5G54200 | 37.549 | 514 | 252 | 11 | 128 | 579 | 319 | 825 | 5.37e-94 | 306 |
| MS.gene58092.t1 | AT5G42010 | 40.845 | 355 | 161 | 4 | 104 | 409 | 194 | 548 | 2.73e-81 | 266 |
| MS.gene58092.t1 | AT5G02430 | 34.749 | 518 | 256 | 9 | 139 | 579 | 386 | 898 | 4.74e-80 | 270 |
| MS.gene58092.t1 | AT2G37670 | 39.071 | 366 | 178 | 4 | 139 | 462 | 380 | 742 | 1.11e-75 | 258 |
| MS.gene58092.t1 | AT2G37670 | 39.071 | 366 | 178 | 4 | 139 | 462 | 379 | 741 | 1.15e-75 | 258 |
| MS.gene58092.t1 | AT3G49660 | 25.086 | 291 | 185 | 9 | 151 | 433 | 11 | 276 | 2.60e-22 | 98.6 |
| MS.gene58092.t1 | AT4G02730 | 26.814 | 317 | 188 | 12 | 123 | 429 | 5 | 287 | 9.09e-20 | 91.3 |
| MS.gene58092.t1 | AT2G43770 | 24.731 | 279 | 173 | 9 | 160 | 428 | 49 | 300 | 4.11e-16 | 80.5 |
| MS.gene58092.t1 | AT5G25150 | 27.684 | 177 | 105 | 6 | 161 | 334 | 457 | 613 | 9.58e-13 | 71.6 |
| MS.gene58092.t1 | AT5G25150 | 27.684 | 177 | 105 | 6 | 161 | 334 | 457 | 613 | 1.09e-12 | 71.2 |
| MS.gene58092.t1 | AT2G16405 | 28.105 | 153 | 91 | 2 | 179 | 330 | 188 | 322 | 1.36e-12 | 70.5 |
Find 116 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGATCCAATATGCAGATTT+TGG | 0.140444 | 4.2:+9318012 | None:intergenic |
| ATCAAGACATTCCACAATTT+TGG | 0.147050 | 4.2:-9317239 | MS.gene58092:CDS |
| GTGAGGCAAAAGAAGAATTT+TGG | 0.149020 | 4.2:-9319467 | MS.gene58092:CDS |
| TCACCTTCTGGTAAAGTATC+TGG | 0.167154 | 4.2:-9319609 | MS.gene58092:CDS |
| AGGACTCGCGCGTGTATATT+TGG | 0.192771 | 4.2:-9317679 | MS.gene58092:CDS |
| CAGTCCCAATGGTCAGTATT+TGG | 0.195556 | 4.2:-9319223 | MS.gene58092:CDS |
| TTTGTAGTTGGTTCTCTTAC+AGG | 0.204905 | 4.2:-9318398 | MS.gene58092:CDS |
| TTGATGGTAAAGTTCGAATA+TGG | 0.250806 | 4.2:-9318624 | MS.gene58092:CDS |
| TGGCTTGCCTGTTAGGCTTT+AGG | 0.253307 | 4.2:-9317219 | None:intergenic |
| CAACAAGATTACTGGCATTC+AGG | 0.268264 | 4.2:-9318197 | MS.gene58092:intron |
| TCTTGTTGGAAGATCTTAAA+AGG | 0.284736 | 4.2:-9319542 | MS.gene58092:CDS |
| TTCCAGTGATATCTTGGATT+TGG | 0.289851 | 4.2:-9319067 | MS.gene58092:CDS |
| TAATTCTCTGACAGTTGTTT+TGG | 0.290037 | 4.2:+9318053 | None:intergenic |
| GGTAATTGGTTCTTCATTGA+TGG | 0.304868 | 4.2:-9317440 | MS.gene58092:CDS |
| AATGCAAGCATTTCACCTTC+TGG | 0.331414 | 4.2:-9319621 | MS.gene58092:CDS |
| TCGATAATGGTAAAGCTAAT+AGG | 0.334017 | 4.2:-9319440 | MS.gene58092:CDS |
| TTATTGACTGGGCAGATATA+CGG | 0.336332 | 4.2:-9318582 | MS.gene58092:CDS |
| GATGACTGGTCGGTCACATT+GGG | 0.337398 | 4.2:-9319681 | MS.gene58092:CDS |
| GAGCTCACAAAGGACTAATA+TGG | 0.353947 | 4.2:-9319257 | MS.gene58092:CDS |
| TATTCGAACTTTACCATCAA+TGG | 0.358267 | 4.2:+9318627 | None:intergenic |
| ATTTAGCTTACACTTCTTCC+AGG | 0.372892 | 4.2:-9319734 | MS.gene58092:CDS |
| TTTATCAGTGGATCCATTGA+TGG | 0.375545 | 4.2:-9318640 | MS.gene58092:CDS |
| TTCTGAAGCTGAAGTCTTGT+TGG | 0.380038 | 4.2:-9319556 | MS.gene58092:CDS |
| AGATTCCAAAATCTGCATAT+TGG | 0.388192 | 4.2:-9318017 | MS.gene58092:CDS |
| TGGTCATTCCAGTGATATCT+TGG | 0.395337 | 4.2:-9319073 | MS.gene58092:CDS |
| GCATTAGGCAACAAGATTAC+TGG | 0.396820 | 4.2:-9318205 | MS.gene58092:CDS |
| GCATTGTCCTAAAGCCTAAC+AGG | 0.399732 | 4.2:+9317212 | None:intergenic |
| TCGCCACTTCAAGAATTGTT+TGG | 0.405306 | 4.2:-9319093 | MS.gene58092:CDS |
| TCTGGGAAGTTGGTTCTCTC+TGG | 0.410316 | 4.2:-9319591 | MS.gene58092:CDS |
| CATGGAAAGAAGAAAGCATT+AGG | 0.419424 | 4.2:-9318220 | MS.gene58092:CDS |
| CCCACTTGATGTAAATGAAC+CGG | 0.420329 | 4.2:+9317724 | None:intergenic |
| TGGATAAAACTGTTCGCGCT+TGG | 0.427183 | 4.2:-9318906 | MS.gene58092:CDS |
| CATGTGCAGGGATTTGTAGT+TGG | 0.427358 | 4.2:-9318410 | MS.gene58092:intron |
| CTAATGCTTTCTTCTTTCCA+TGG | 0.431274 | 4.2:+9318221 | None:intergenic |
| TGCAACAGTTACGCCCTTGA+AGG | 0.436499 | 4.2:+9317589 | None:intergenic |
| GATTCTTCTTTCGTCTTCGA+TGG | 0.446992 | 4.2:-9318926 | MS.gene58092:CDS |
| CACCTTCTGGTAAAGTATCT+GGG | 0.458891 | 4.2:-9319608 | MS.gene58092:CDS |
| TCCGGTTCATTTACATCAAG+TGG | 0.463250 | 4.2:-9317725 | MS.gene58092:CDS |
| TGATGGTAAAGTTCGAATAT+GGG | 0.463939 | 4.2:-9318623 | MS.gene58092:CDS |
| GTGATATCTTGGATTTGGCC+TGG | 0.468041 | 4.2:-9319062 | MS.gene58092:CDS |
| AAGATGGCGTTGTGCGCATA+TGG | 0.468274 | 4.2:-9319188 | MS.gene58092:CDS |
| TGATGACTGGTCGGTCACAT+TGG | 0.471379 | 4.2:-9319682 | MS.gene58092:CDS |
| CTCAGAAGTAACCTCTAGCT+TGG | 0.473947 | 4.2:+9317490 | None:intergenic |
| CATGTTGGAAGTTTCTCCTC+AGG | 0.483782 | 4.2:+9317386 | None:intergenic |
| CTATCAGGCCTTCCATGGTC+AGG | 0.488291 | 4.2:-9317758 | MS.gene58092:intron |
| GGGAAACATATCATTTCAGT+TGG | 0.490890 | 4.2:-9317704 | MS.gene58092:CDS |
| TATTTATCTGCGCCTCAAGC+TGG | 0.494606 | 4.2:+9318245 | None:intergenic |
| TCGTTCTATCAGGCCTTCCA+TGG | 0.502364 | 4.2:-9317763 | MS.gene58092:intron |
| TTCATTGATGGTACATGTCG+AGG | 0.508863 | 4.2:-9317428 | MS.gene58092:CDS |
| CTAGCCAAATACTGACCATT+GGG | 0.509035 | 4.2:+9319219 | None:intergenic |
| AACTTCAATGACTTCAAAAG+TGG | 0.509136 | 4.2:-9317656 | MS.gene58092:CDS |
| TATTGACTGGGCAGATATAC+GGG | 0.510784 | 4.2:-9318581 | MS.gene58092:CDS |
| TTGGCTAGTGGAGGTGAAGA+TGG | 0.511823 | 4.2:-9319204 | MS.gene58092:CDS |
| GCTATAAGTTATCAACAAGA+TGG | 0.514520 | 4.2:-9318547 | MS.gene58092:CDS |
| GGAAGTTGGTTCTCTCTGGA+TGG | 0.518254 | 4.2:-9319587 | MS.gene58092:CDS |
| ATAGTAGCAGCTGGCAGTGA+TGG | 0.524175 | 4.2:-9317266 | MS.gene58092:CDS |
| TGGTAAAGTATCTGGGAAGT+TGG | 0.533172 | 4.2:-9319601 | MS.gene58092:CDS |
| ACTAGCCAAATACTGACCAT+TGG | 0.537399 | 4.2:+9319218 | None:intergenic |
| GTGAAGAACGAGTTATTGAC+TGG | 0.539351 | 4.2:-9318594 | MS.gene58092:CDS |
| ATCATTTGGAAGGGAAACAA+AGG | 0.543245 | 4.2:+9319134 | None:intergenic |
| TTTCTCTTGTGAACAAACCC+TGG | 0.543560 | 4.2:+9319716 | None:intergenic |
| AGGAAAATATTTCCAGCTTG+AGG | 0.544685 | 4.2:-9318257 | MS.gene58092:CDS |
| TGTCACGAAGATAGTAGCTA+TGG | 0.545197 | 4.2:-9317320 | MS.gene58092:CDS |
| GAGAGGATCGTGGCAAGCAG+TGG | 0.545339 | 4.2:-9319654 | MS.gene58092:CDS |
| TTTAGCTTACACTTCTTCCA+GGG | 0.546525 | 4.2:-9319733 | MS.gene58092:CDS |
| TGGTCAGGAAGTCAGATGTC+CGG | 0.560460 | 4.2:-9317743 | MS.gene58092:CDS |
| AATGAAAATTACTTTATCAG+TGG | 0.560882 | 4.2:-9318652 | MS.gene58092:CDS |
| GGCCAAATCCAAGATATCAC+TGG | 0.565834 | 4.2:+9319065 | None:intergenic |
| CTGAGGAGAAACTTCCAACA+TGG | 0.568255 | 4.2:-9317385 | MS.gene58092:CDS |
| CAAGAGCACAGACAGAGAGA+AGG | 0.571987 | 4.2:-9319489 | MS.gene58092:CDS |
| AAGGAATATATCAGAAACAT+GGG | 0.572905 | 4.2:-9317297 | MS.gene58092:CDS |
| GAAGGGAAACAAAGGGAGGA+CGG | 0.573342 | 4.2:+9319142 | None:intergenic |
| CAAGCTAGAGGTTACTTCTG+AGG | 0.574127 | 4.2:-9317489 | MS.gene58092:CDS |
| TCTGACTTCCTGACCATGGA+AGG | 0.577834 | 4.2:+9317750 | None:intergenic |
| AATGGTCAGTATTTGGCTAG+TGG | 0.581244 | 4.2:-9319216 | MS.gene58092:CDS |
| GCACAGACAGAGAGAAGGTG+AGG | 0.583206 | 4.2:-9319484 | MS.gene58092:CDS |
| AACATCAGGAAAGGCGACAA+AGG | 0.583659 | 4.2:-9319393 | MS.gene58092:CDS |
| TCATTTGGAAGGGAAACAAA+GGG | 0.585294 | 4.2:+9319135 | None:intergenic |
| TACTTACCAAAGCCTTTGTG+AGG | 0.587036 | 4.2:+9318850 | None:intergenic |
| GAAGGAATATATCAGAAACA+TGG | 0.587961 | 4.2:-9317298 | MS.gene58092:CDS |
| ACATATCATTTCAGTTGGAG+AGG | 0.592725 | 4.2:-9317699 | MS.gene58092:CDS |
| TGACCAAACAATTCTTGAAG+TGG | 0.593619 | 4.2:+9319090 | None:intergenic |
| TTCCCAGATACTTTACCAGA+AGG | 0.594322 | 4.2:+9319606 | None:intergenic |
| ACAAGAGGTAAATCCCATGT+TGG | 0.595289 | 4.2:+9317371 | None:intergenic |
| CGGTCACATTGGGGTCGGAG+AGG | 0.600622 | 4.2:-9319671 | MS.gene58092:CDS |
| ATGACTGGTCGGTCACATTG+GGG | 0.606700 | 4.2:-9319680 | MS.gene58092:CDS |
| CTGGTCGGTCACATTGGGGT+CGG | 0.607068 | 4.2:-9319676 | MS.gene58092:CDS |
| GCGTAACTGTTGCAATACCT+TGG | 0.607882 | 4.2:-9317580 | MS.gene58092:CDS |
| AAGGCGGCGTGAGTATGAAG+TGG | 0.612912 | 4.2:-9319523 | MS.gene58092:CDS |
| GAGTTCAGTGAGGTATACAT+TGG | 0.614698 | 4.2:-9319291 | MS.gene58092:CDS |
| TCACATTCATCTTCTACAAG+AGG | 0.615378 | 4.2:+9317356 | None:intergenic |
| GGTCTAACGATAGTAGCAGC+TGG | 0.616322 | 4.2:-9317275 | MS.gene58092:CDS |
| CCGGTTCATTTACATCAAGT+GGG | 0.623114 | 4.2:-9317724 | MS.gene58092:CDS |
| TACTTCTATGACATGGCCTG+AGG | 0.623220 | 4.2:-9317402 | MS.gene58092:CDS |
| TAACAGGCAAGCCAAAATTG+TGG | 0.625636 | 4.2:+9317228 | None:intergenic |
| ACTTACCAAAGCCTTTGTGA+GGG | 0.626300 | 4.2:+9318851 | None:intergenic |
| GACATCTGACTTCCTGACCA+TGG | 0.626991 | 4.2:+9317746 | None:intergenic |
| GATGGTAAAGTTCGAATATG+GGG | 0.630516 | 4.2:-9318622 | MS.gene58092:CDS |
| ACTATGAAATTCAGTCCCAA+TGG | 0.634522 | 4.2:-9319234 | MS.gene58092:CDS |
| GAGGCGCAGATAAATATCCA+TGG | 0.635034 | 4.2:-9318238 | MS.gene58092:CDS |
| GAATAAAACTCGTAGAGTGA+AGG | 0.636114 | 4.2:-9319340 | MS.gene58092:CDS |
| ACGAAGATAGTAGCTATGGA+AGG | 0.636891 | 4.2:-9317316 | MS.gene58092:CDS |
| GAGATTGTTCAGAAATACAA+AGG | 0.642821 | 4.2:-9317986 | MS.gene58092:intron |
| ATTGGGGTCGGAGAGGATCG+TGG | 0.644123 | 4.2:-9319664 | MS.gene58092:CDS |
| TGAGGAGAAACTTCCAACAT+GGG | 0.648751 | 4.2:-9317384 | MS.gene58092:CDS |
| GAGGTGGATGGAGTTCAGTG+AGG | 0.649416 | 4.2:-9319301 | MS.gene58092:CDS |
| GGTCAGTATTTGGCTAGTGG+AGG | 0.649574 | 4.2:-9319213 | MS.gene58092:CDS |
| GAGGTTCTACTTCTATGACA+TGG | 0.678336 | 4.2:-9317409 | MS.gene58092:CDS |
| ACTCACATCTGAATTAGACC+AGG | 0.684342 | 4.2:+9319044 | None:intergenic |
| TGTTGGAAGATCTTAAAAGG+CGG | 0.697921 | 4.2:-9319539 | MS.gene58092:CDS |
| CAAGAAATTAGAGCTCACAA+AGG | 0.699622 | 4.2:-9319267 | MS.gene58092:CDS |
| TGAAGAACGAGTTATTGACT+GGG | 0.701967 | 4.2:-9318593 | MS.gene58092:CDS |
| ACTGTTGCAATACCTTGGTG+TGG | 0.716842 | 4.2:-9317575 | MS.gene58092:CDS |
| AGGAATATATCAGAAACATG+GGG | 0.726541 | 4.2:-9317296 | MS.gene58092:CDS |
| TTTGGAAGGGAAACAAAGGG+AGG | 0.738048 | 4.2:+9319138 | None:intergenic |
| GGCATGAAAACAGATAGACG+TGG | 0.825232 | 4.2:-9317554 | MS.gene58092:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATTTGAAAAATATCATT+TGG | + | chr4.2:9317841-9317860 | None:intergenic | 15.0% |
| !!! | AAATGATATTTTTCAAATTG+AGG | - | chr4.2:9317840-9317859 | MS.gene58092:intron | 15.0% |
| !!! | TTTAGAAACTATTTTATCTT+CGG | + | chr4.2:9318662-9318681 | None:intergenic | 15.0% |
| !! | AACAATTGAAGTACAAAATA+AGG | + | chr4.2:9318852-9318871 | None:intergenic | 20.0% |
| !! | AATGAAAATTACTTTATCAG+TGG | - | chr4.2:9318306-9318325 | MS.gene58092:intron | 20.0% |
| !! | TTCTTCGAAAAAAATGAAAT+CGG | - | chr4.2:9319325-9319344 | MS.gene58092:CDS | 20.0% |
| !! | TTGAAAAATATCATTTGGAA+GGG | + | chr4.2:9317836-9317855 | None:intergenic | 20.0% |
| !! | TTTGAAAAATATCATTTGGA+AGG | + | chr4.2:9317837-9317856 | None:intergenic | 20.0% |
| !!! | AAGCATTTTAATTTGTATTC+CGG | - | chr4.2:9318811-9318830 | MS.gene58092:intron | 20.0% |
| !!! | ATAAAGTAATTTTCATTGAC+AGG | + | chr4.2:9318303-9318322 | None:intergenic | 20.0% |
| !!! | ATCAGATTTCTAATGATTTT+AGG | - | chr4.2:9318681-9318700 | MS.gene58092:CDS | 20.0% |
| !!! | TAAAGTAATTTTCATTGACA+GGG | + | chr4.2:9318302-9318321 | None:intergenic | 20.0% |
| ! | AAGGAATATATCAGAAACAT+GGG | - | chr4.2:9319661-9319680 | MS.gene58092:CDS | 25.0% |
| ! | AATGTTATGAACAAAGCATA+TGG | + | chr4.2:9318200-9318219 | None:intergenic | 25.0% |
| ! | CAAAAAATCGTGAAAATCAT+TGG | + | chr4.2:9318462-9318481 | None:intergenic | 25.0% |
| ! | CTAAACAAGGTTTAAATTTG+TGG | + | chr4.2:9319028-9319047 | None:intergenic | 25.0% |
| ! | TAACTAACTAAACATAGTTG+TGG | + | chr4.2:9318166-9318185 | None:intergenic | 25.0% |
| ! | TAATAGATTCATCAATCTCA+TGG | + | chr4.2:9318521-9318540 | None:intergenic | 25.0% |
| ! | TATAAAACAGATTGCAACAT+TGG | + | chr4.2:9317953-9317972 | None:intergenic | 25.0% |
| !! | TATTACATTTTACATGTGCA+GGG | - | chr4.2:9318536-9318555 | MS.gene58092:intron | 25.0% |
| !!! | AAGGTTTTTTTCTTTCTTTC+CGG | + | chr4.2:9318833-9318852 | None:intergenic | 25.0% |
| !!! | ATGTTTCTATTGATAGTGTT+TGG | - | chr4.2:9319139-9319158 | MS.gene58092:CDS | 25.0% |
| AACATAGTTGTGGAAAATAC+AGG | + | chr4.2:9318156-9318175 | None:intergenic | 30.0% | |
| AACTTCAATGACTTCAAAAG+TGG | - | chr4.2:9319302-9319321 | MS.gene58092:CDS | 30.0% | |
| ACTGTATCCAATTATAGAAG+AGG | + | chr4.2:9318261-9318280 | None:intergenic | 30.0% | |
| ACTTTGACAAAGAAATCTTG+CGG | - | chr4.2:9318495-9318514 | MS.gene58092:intron | 30.0% | |
| AGATTCCAAAATCTGCATAT+TGG | - | chr4.2:9318941-9318960 | MS.gene58092:intron | 30.0% | |
| AGGAATATATCAGAAACATG+GGG | - | chr4.2:9319662-9319681 | MS.gene58092:CDS | 30.0% | |
| AGGTAAAGCAGAATAAAAAG+AGG | - | chr4.2:9317638-9317657 | MS.gene58092:CDS | 30.0% | |
| CTGTATCCAATTATAGAAGA+GGG | + | chr4.2:9318260-9318279 | None:intergenic | 30.0% | |
| GAAGGAATATATCAGAAACA+TGG | - | chr4.2:9319660-9319679 | MS.gene58092:CDS | 30.0% | |
| GAGATTGTTCAGAAATACAA+AGG | - | chr4.2:9318972-9318991 | MS.gene58092:intron | 30.0% | |
| GCTATAAGTTATCAACAAGA+TGG | - | chr4.2:9318411-9318430 | MS.gene58092:intron | 30.0% | |
| GTAAAGCTAATAGGAAAAAC+TGG | - | chr4.2:9317527-9317546 | MS.gene58092:CDS | 30.0% | |
| TAAAGCAGAATAAAAAGAGG+TGG | - | chr4.2:9317641-9317660 | MS.gene58092:CDS | 30.0% | |
| TACCTGAAGCAACATAAAAA+CGG | + | chr4.2:9318592-9318611 | None:intergenic | 30.0% | |
| TATTCGAACTTTACCATCAA+TGG | + | chr4.2:9318334-9318353 | None:intergenic | 30.0% | |
| TCTTGTTGGAAGATCTTAAA+AGG | - | chr4.2:9317416-9317435 | MS.gene58092:CDS | 30.0% | |
| TGATGGTAAAGTTCGAATAT+GGG | - | chr4.2:9318335-9318354 | MS.gene58092:intron | 30.0% | |
| ! | ATCAAGACATTCCACAATTT+TGG | - | chr4.2:9319719-9319738 | MS.gene58092:CDS | 30.0% |
| ! | CCTTGTTTAGAACTTTGTTT+AGG | - | chr4.2:9319038-9319057 | MS.gene58092:intron | 30.0% |
| ! | CTATTACATTTTACATGTGC+AGG | - | chr4.2:9318535-9318554 | MS.gene58092:intron | 30.0% |
| ! | TAACTTTTCTCACTATTCTC+TGG | - | chr4.2:9319436-9319455 | MS.gene58092:CDS | 30.0% |
| ! | TAATTCTCTGACAGTTGTTT+TGG | + | chr4.2:9318908-9318927 | None:intergenic | 30.0% |
| ! | TACAAAGGTACAACACTTAA+TGG | - | chr4.2:9318987-9319006 | MS.gene58092:intron | 30.0% |
| ! | TCGATAATGGTAAAGCTAAT+AGG | - | chr4.2:9317518-9317537 | MS.gene58092:CDS | 30.0% |
| ! | TGAGGCAAAAGAAGAATTTT+GGG | - | chr4.2:9317492-9317511 | MS.gene58092:CDS | 30.0% |
| ! | TTGATGGTAAAGTTCGAATA+TGG | - | chr4.2:9318334-9318353 | MS.gene58092:intron | 30.0% |
| !! | AACGATTTTCTCTTGGTAAT+TGG | - | chr4.2:9319504-9319523 | MS.gene58092:CDS | 30.0% |
| !! | CCTAAACAAAGTTCTAAACA+AGG | + | chr4.2:9319041-9319060 | None:intergenic | 30.0% |
| !!! | GAATTTTGGGATTTCGATAA+TGG | - | chr4.2:9317505-9317524 | MS.gene58092:CDS | 30.0% |
| ACATATCATTTCAGTTGGAG+AGG | - | chr4.2:9319259-9319278 | MS.gene58092:CDS | 35.0% | |
| ACTATGAAATTCAGTCCCAA+TGG | - | chr4.2:9317724-9317743 | MS.gene58092:CDS | 35.0% | |
| ACTTAATGGTTGTCACAATC+TGG | - | chr4.2:9319001-9319020 | MS.gene58092:intron | 35.0% | |
| AGGAAAATATTTCCAGCTTG+AGG | - | chr4.2:9318701-9318720 | MS.gene58092:intron | 35.0% | |
| ATCATTTGGAAGGGAAACAA+AGG | + | chr4.2:9317827-9317846 | None:intergenic | 35.0% | |
| ATGTTCAATGTCTAAGAGCA+TGG | + | chr4.2:9318224-9318243 | None:intergenic | 35.0% | |
| ATTGTGCCCTCTTCTATAAT+TGG | - | chr4.2:9318251-9318270 | MS.gene58092:CDS | 35.0% | |
| CAAGAAATTAGAGCTCACAA+AGG | - | chr4.2:9317691-9317710 | MS.gene58092:CDS | 35.0% | |
| CTAATGCTTTCTTCTTTCCA+TGG | + | chr4.2:9318740-9318759 | None:intergenic | 35.0% | |
| GAATAAAACTCGTAGAGTGA+AGG | - | chr4.2:9317618-9317637 | MS.gene58092:CDS | 35.0% | |
| GATGGTAAAGTTCGAATATG+GGG | - | chr4.2:9318336-9318355 | MS.gene58092:intron | 35.0% | |
| GGGAAACATATCATTTCAGT+TGG | - | chr4.2:9319254-9319273 | MS.gene58092:CDS | 35.0% | |
| TCACATTCATCTTCTACAAG+AGG | + | chr4.2:9319605-9319624 | None:intergenic | 35.0% | |
| TCATTTGGAAGGGAAACAAA+GGG | + | chr4.2:9317826-9317845 | None:intergenic | 35.0% | |
| TGACCAAACAATTCTTGAAG+TGG | + | chr4.2:9317871-9317890 | None:intergenic | 35.0% | |
| TGTTGGAAGATCTTAAAAGG+CGG | - | chr4.2:9317419-9317438 | MS.gene58092:CDS | 35.0% | |
| TTCCAGTGATATCTTGGATT+TGG | - | chr4.2:9317891-9317910 | MS.gene58092:intron | 35.0% | |
| TTTATCAGTGGATCCATTGA+TGG | - | chr4.2:9318318-9318337 | MS.gene58092:intron | 35.0% | |
| ! | ATTTAGCTTACACTTCTTCC+AGG | - | chr4.2:9317224-9317243 | MS.gene58092:CDS | 35.0% |
| ! | GATACAGAACGATTTTCTCT+TGG | - | chr4.2:9319497-9319516 | MS.gene58092:CDS | 35.0% |
| ! | GGTAATTGGTTCTTCATTGA+TGG | - | chr4.2:9319518-9319537 | MS.gene58092:CDS | 35.0% |
| ! | GTGAGGCAAAAGAAGAATTT+TGG | - | chr4.2:9317491-9317510 | MS.gene58092:CDS | 35.0% |
| ! | TCGATCCAATATGCAGATTT+TGG | + | chr4.2:9318949-9318968 | None:intergenic | 35.0% |
| ! | TGAAGAACGAGTTATTGACT+GGG | - | chr4.2:9318365-9318384 | MS.gene58092:intron | 35.0% |
| ! | TGTGAGTACTTTTCCTTCAA+GGG | - | chr4.2:9319356-9319375 | MS.gene58092:CDS | 35.0% |
| ! | TTATTGACTGGGCAGATATA+CGG | - | chr4.2:9318376-9318395 | MS.gene58092:CDS | 35.0% |
| ! | TTGTGAGTACTTTTCCTTCA+AGG | - | chr4.2:9319355-9319374 | MS.gene58092:CDS | 35.0% |
| ! | TTTAGCTTACACTTCTTCCA+GGG | - | chr4.2:9317225-9317244 | MS.gene58092:CDS | 35.0% |
| ! | TTTGTAGTTGGTTCTCTTAC+AGG | - | chr4.2:9318560-9318579 | MS.gene58092:CDS | 35.0% |
| !! | AAACAACGAGTTTTGATGAC+TGG | - | chr4.2:9317263-9317282 | MS.gene58092:CDS | 35.0% |
| !! | CATGGAAAGAAGAAAGCATT+AGG | - | chr4.2:9318738-9318757 | MS.gene58092:intron | 35.0% |
| AATGCAAGCATTTCACCTTC+TGG | - | chr4.2:9317337-9317356 | MS.gene58092:CDS | 40.0% | |
| AATGGTCAGTATTTGGCTAG+TGG | - | chr4.2:9317742-9317761 | MS.gene58092:CDS | 40.0% | |
| ACAAGAGGTAAATCCCATGT+TGG | + | chr4.2:9319590-9319609 | None:intergenic | 40.0% | |
| ACGAAGATAGTAGCTATGGA+AGG | - | chr4.2:9319642-9319661 | MS.gene58092:CDS | 40.0% | |
| ACTAGCCAAATACTGACCAT+TGG | + | chr4.2:9317743-9317762 | None:intergenic | 40.0% | |
| ACTCACATCTGAATTAGACC+AGG | + | chr4.2:9317917-9317936 | None:intergenic | 40.0% | |
| ACTTACCAAAGCCTTTGTGA+GGG | + | chr4.2:9318110-9318129 | None:intergenic | 40.0% | |
| CAACAAGATTACTGGCATTC+AGG | - | chr4.2:9318761-9318780 | MS.gene58092:intron | 40.0% | |
| CCCACTTGATGTAAATGAAC+CGG | + | chr4.2:9319237-9319256 | None:intergenic | 40.0% | |
| CCGGTTCATTTACATCAAGT+GGG | - | chr4.2:9319234-9319253 | MS.gene58092:CDS | 40.0% | |
| CTAGCCAAATACTGACCATT+GGG | + | chr4.2:9317742-9317761 | None:intergenic | 40.0% | |
| CTCATGAATGTAGCAGCAAT+TGG | + | chr4.2:9318630-9318649 | None:intergenic | 40.0% | |
| GAGCTCACAAAGGACTAATA+TGG | - | chr4.2:9317701-9317720 | MS.gene58092:CDS | 40.0% | |
| GAGGTTCTACTTCTATGACA+TGG | - | chr4.2:9319549-9319568 | MS.gene58092:CDS | 40.0% | |
| GAGTTCAGTGAGGTATACAT+TGG | - | chr4.2:9317667-9317686 | MS.gene58092:CDS | 40.0% | |
| GATTCTTCTTTCGTCTTCGA+TGG | - | chr4.2:9318032-9318051 | MS.gene58092:CDS | 40.0% | |
| GCAGAATAAAAAGAGGTGGA+TGG | - | chr4.2:9317645-9317664 | MS.gene58092:CDS | 40.0% | |
| GCATTAGGCAACAAGATTAC+TGG | - | chr4.2:9318753-9318772 | MS.gene58092:intron | 40.0% | |
| GTGAAGAACGAGTTATTGAC+TGG | - | chr4.2:9318364-9318383 | MS.gene58092:intron | 40.0% | |
| TAACAGGCAAGCCAAAATTG+TGG | + | chr4.2:9319733-9319752 | None:intergenic | 40.0% | |
| TACTTACCAAAGCCTTTGTG+AGG | + | chr4.2:9318111-9318130 | None:intergenic | 40.0% | |
| TCCGGTTCATTTACATCAAG+TGG | - | chr4.2:9319233-9319252 | MS.gene58092:CDS | 40.0% | |
| TCGCCACTTCAAGAATTGTT+TGG | - | chr4.2:9317865-9317884 | MS.gene58092:intron | 40.0% | |
| TGAGGAGAAACTTCCAACAT+GGG | - | chr4.2:9319574-9319593 | MS.gene58092:CDS | 40.0% | |
| TGGAAGAACTGCAAACAACA+TGG | + | chr4.2:9318888-9318907 | None:intergenic | 40.0% | |
| TGGTCATTCCAGTGATATCT+TGG | - | chr4.2:9317885-9317904 | MS.gene58092:intron | 40.0% | |
| TGTCACGAAGATAGTAGCTA+TGG | - | chr4.2:9319638-9319657 | MS.gene58092:CDS | 40.0% | |
| TTCCCAGATACTTTACCAGA+AGG | + | chr4.2:9317355-9317374 | None:intergenic | 40.0% | |
| TTGCTTCAGGTATGTACATG+TGG | - | chr4.2:9318600-9318619 | MS.gene58092:CDS | 40.0% | |
| TTTCTCTTGTGAACAAACCC+TGG | + | chr4.2:9317245-9317264 | None:intergenic | 40.0% | |
| ! | CACCTTCTGGTAAAGTATCT+GGG | - | chr4.2:9317350-9317369 | MS.gene58092:CDS | 40.0% |
| ! | CGTTTTGTGAACATCAGGAA+AGG | - | chr4.2:9317556-9317575 | MS.gene58092:CDS | 40.0% |
| ! | CTAAGTGTTTTCCCTCACAA+AGG | - | chr4.2:9318096-9318115 | MS.gene58092:intron | 40.0% |
| ! | GTCAGTTTTCTCGTTCTATC+AGG | - | chr4.2:9319185-9319204 | MS.gene58092:CDS | 40.0% |
| ! | TATTGACTGGGCAGATATAC+GGG | - | chr4.2:9318377-9318396 | MS.gene58092:CDS | 40.0% |
| ! | TCACCTTCTGGTAAAGTATC+TGG | - | chr4.2:9317349-9317368 | MS.gene58092:CDS | 40.0% |
| ! | TGGTAAAGTATCTGGGAAGT+TGG | - | chr4.2:9317357-9317376 | MS.gene58092:CDS | 40.0% |
| ! | TTCATTGATGGTACATGTCG+AGG | - | chr4.2:9319530-9319549 | MS.gene58092:CDS | 40.0% |
| !! | AACGAGTTTTGATGACTGGT+CGG | - | chr4.2:9317267-9317286 | MS.gene58092:CDS | 40.0% |
| !! | TGAAGCGTTTTGTGAACATC+AGG | - | chr4.2:9317551-9317570 | MS.gene58092:CDS | 40.0% |
| !! | TTCTGAAGCTGAAGTCTTGT+TGG | - | chr4.2:9317402-9317421 | MS.gene58092:CDS | 40.0% |
| !!! | ACAATTTTGGCTTGCCTGTT+AGG | - | chr4.2:9319732-9319751 | MS.gene58092:CDS | 40.0% |
| !!! | TGCCGTTTTTATGTTGCTTC+AGG | - | chr4.2:9318587-9318606 | MS.gene58092:CDS | 40.0% |
| AACATCAGGAAAGGCGACAA+AGG | - | chr4.2:9317565-9317584 | MS.gene58092:CDS | 45.0% | |
| ACTGTTGCAATACCTTGGTG+TGG | - | chr4.2:9319383-9319402 | MS.gene58092:CDS | 45.0% | |
| CAAGCTAGAGGTTACTTCTG+AGG | - | chr4.2:9319469-9319488 | MS.gene58092:CDS | 45.0% | |
| CAGTCCCAATGGTCAGTATT+TGG | - | chr4.2:9317735-9317754 | MS.gene58092:CDS | 45.0% | |
| CATGTGCAGGGATTTGTAGT+TGG | - | chr4.2:9318548-9318567 | MS.gene58092:CDS | 45.0% | |
| CATGTTGGAAGTTTCTCCTC+AGG | + | chr4.2:9319575-9319594 | None:intergenic | 45.0% | |
| CTCAGAAGTAACCTCTAGCT+TGG | + | chr4.2:9319471-9319490 | None:intergenic | 45.0% | |
| CTGAGGAGAAACTTCCAACA+TGG | - | chr4.2:9319573-9319592 | MS.gene58092:CDS | 45.0% | |
| GAGGCGCAGATAAATATCCA+TGG | - | chr4.2:9318720-9318739 | MS.gene58092:intron | 45.0% | |
| GCGTAACTGTTGCAATACCT+TGG | - | chr4.2:9319378-9319397 | MS.gene58092:CDS | 45.0% | |
| GGAAGCAAAAACCAAGCTAG+AGG | - | chr4.2:9319457-9319476 | MS.gene58092:CDS | 45.0% | |
| GGCATGAAAACAGATAGACG+TGG | - | chr4.2:9319404-9319423 | MS.gene58092:CDS | 45.0% | |
| GGCCAAATCCAAGATATCAC+TGG | + | chr4.2:9317896-9317915 | None:intergenic | 45.0% | |
| GTGATATCTTGGATTTGGCC+TGG | - | chr4.2:9317896-9317915 | MS.gene58092:intron | 45.0% | |
| TACTTCTATGACATGGCCTG+AGG | - | chr4.2:9319556-9319575 | MS.gene58092:CDS | 45.0% | |
| TATTTATCTGCGCCTCAAGC+TGG | + | chr4.2:9318716-9318735 | None:intergenic | 45.0% | |
| TGGATAAAACTGTTCGCGCT+TGG | - | chr4.2:9318052-9318071 | MS.gene58092:CDS | 45.0% | |
| TTTGGAAGGGAAACAAAGGG+AGG | + | chr4.2:9317823-9317842 | None:intergenic | 45.0% | |
| ! | GTTTTCCCTCACAAAGGCTT+TGG | - | chr4.2:9318102-9318121 | MS.gene58092:intron | 45.0% |
| ! | TCTGTTTTCATGCCACACCA+AGG | + | chr4.2:9319398-9319417 | None:intergenic | 45.0% |
| AAGATGGCGTTGTGCGCATA+TGG | - | chr4.2:9317770-9317789 | MS.gene58092:intron | 50.0% | |
| AGGACTCGCGCGTGTATATT+TGG | - | chr4.2:9319279-9319298 | MS.gene58092:CDS | 50.0% | |
| ATAGTAGCAGCTGGCAGTGA+TGG | - | chr4.2:9319692-9319711 | MS.gene58092:CDS | 50.0% | |
| GAAGGGAAACAAAGGGAGGA+CGG | + | chr4.2:9317819-9317838 | None:intergenic | 50.0% | |
| GACATCTGACTTCCTGACCA+TGG | + | chr4.2:9319215-9319234 | None:intergenic | 50.0% | |
| GGTCAGTATTTGGCTAGTGG+AGG | - | chr4.2:9317745-9317764 | MS.gene58092:CDS | 50.0% | |
| GGTCTAACGATAGTAGCAGC+TGG | - | chr4.2:9319683-9319702 | MS.gene58092:CDS | 50.0% | |
| TCGTTCTATCAGGCCTTCCA+TGG | - | chr4.2:9319195-9319214 | MS.gene58092:CDS | 50.0% | |
| TCTGACTTCCTGACCATGGA+AGG | + | chr4.2:9319211-9319230 | None:intergenic | 50.0% | |
| TGCAACAGTTACGCCCTTGA+AGG | + | chr4.2:9319372-9319391 | None:intergenic | 50.0% | |
| TGGTCAGGAAGTCAGATGTC+CGG | - | chr4.2:9319215-9319234 | MS.gene58092:CDS | 50.0% | |
| TTGGCTAGTGGAGGTGAAGA+TGG | - | chr4.2:9317754-9317773 | MS.gene58092:CDS | 50.0% | |
| ! | ATGACTGGTCGGTCACATTG+GGG | - | chr4.2:9317278-9317297 | MS.gene58092:CDS | 50.0% |
| ! | CAAGAGCACAGACAGAGAGA+AGG | - | chr4.2:9317469-9317488 | MS.gene58092:CDS | 50.0% |
| ! | GATGACTGGTCGGTCACATT+GGG | - | chr4.2:9317277-9317296 | MS.gene58092:CDS | 50.0% |
| ! | GGAAGTTGGTTCTCTCTGGA+TGG | - | chr4.2:9317371-9317390 | MS.gene58092:CDS | 50.0% |
| ! | TCTGGGAAGTTGGTTCTCTC+TGG | - | chr4.2:9317367-9317386 | MS.gene58092:CDS | 50.0% |
| ! | TGATGACTGGTCGGTCACAT+TGG | - | chr4.2:9317276-9317295 | MS.gene58092:CDS | 50.0% |
| AAGGCGGCGTGAGTATGAAG+TGG | - | chr4.2:9317435-9317454 | MS.gene58092:CDS | 55.0% | |
| CTATCAGGCCTTCCATGGTC+AGG | - | chr4.2:9319200-9319219 | MS.gene58092:CDS | 55.0% | |
| GAGGTGGATGGAGTTCAGTG+AGG | - | chr4.2:9317657-9317676 | MS.gene58092:CDS | 55.0% | |
| GCACAGACAGAGAGAAGGTG+AGG | - | chr4.2:9317474-9317493 | MS.gene58092:CDS | 55.0% | |
| ATTGGGGTCGGAGAGGATCG+TGG | - | chr4.2:9317294-9317313 | MS.gene58092:CDS | 60.0% | |
| CTGGTCGGTCACATTGGGGT+CGG | - | chr4.2:9317282-9317301 | MS.gene58092:CDS | 60.0% | |
| GAGAGGATCGTGGCAAGCAG+TGG | - | chr4.2:9317304-9317323 | MS.gene58092:CDS | 60.0% | |
| CGGTCACATTGGGGTCGGAG+AGG | - | chr4.2:9317287-9317306 | MS.gene58092:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9317220 | 9319760 | 9317220 | ID=MS.gene58092 |
| chr4.2 | mRNA | 9317220 | 9319760 | 9317220 | ID=MS.gene58092.t1;Parent=MS.gene58092 |
| chr4.2 | exon | 9319050 | 9319760 | 9319050 | ID=MS.gene58092.t1.exon1;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9319050 | 9319760 | 9319050 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9318857 | 9318947 | 9318857 | ID=MS.gene58092.t1.exon2;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9318857 | 9318947 | 9318857 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9318543 | 9318700 | 9318543 | ID=MS.gene58092.t1.exon3;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9318543 | 9318700 | 9318543 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9318372 | 9318423 | 9318372 | ID=MS.gene58092.t1.exon4;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9318372 | 9318423 | 9318372 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9318198 | 9318277 | 9318198 | ID=MS.gene58092.t1.exon5;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9318198 | 9318277 | 9318198 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9317987 | 9318080 | 9317987 | ID=MS.gene58092.t1.exon6;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9317987 | 9318080 | 9317987 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| chr4.2 | exon | 9317220 | 9317773 | 9317220 | ID=MS.gene58092.t1.exon7;Parent=MS.gene58092.t1 |
| chr4.2 | CDS | 9317220 | 9317773 | 9317220 | ID=cds.MS.gene58092.t1;Parent=MS.gene58092.t1 |
| Gene Sequence |
| Protein sequence |
