Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59231.t1 | XP_003592082.1 | 95.6 | 431 | 8 | 1 | 1 | 420 | 1 | 431 | 3.40E-232 | 813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59231.t1 | Q6ICX4 | 79.9 | 432 | 63 | 3 | 1 | 420 | 1 | 420 | 1.2e-193 | 677.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59231.t1 | G7IBX9 | 95.6 | 431 | 8 | 1 | 1 | 420 | 1 | 431 | 2.5e-232 | 813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59231 | MS.gene24450 | PPI |
| MS.gene00474 | MS.gene59231 | PPI |
| MS.gene056047 | MS.gene59231 | PPI |
| MS.gene41083 | MS.gene59231 | PPI |
| MS.gene005239 | MS.gene59231 | PPI |
| MS.gene59231 | MS.gene044085 | PPI |
| MS.gene59231 | MS.gene00478 | PPI |
| MS.gene41081 | MS.gene59231 | PPI |
| MS.gene034801 | MS.gene59231 | PPI |
| MS.gene59231 | MS.gene055646 | PPI |
| MS.gene44109 | MS.gene59231 | PPI |
| MS.gene055644 | MS.gene59231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59231.t1 | MTR_1g098530 | 95.592 | 431 | 8 | 1 | 1 | 420 | 1 | 431 | 0.0 | 848 |
| MS.gene59231.t1 | MTR_6g043520 | 81.163 | 430 | 70 | 1 | 1 | 419 | 1 | 430 | 0.0 | 715 |
| MS.gene59231.t1 | MTR_6g037550 | 74.367 | 316 | 64 | 2 | 1 | 305 | 1 | 310 | 8.89e-170 | 479 |
| MS.gene59231.t1 | MTR_6g037540 | 75.439 | 114 | 28 | 0 | 306 | 419 | 1 | 114 | 2.25e-60 | 192 |
| MS.gene59231.t1 | MTR_6g037510 | 80.899 | 89 | 17 | 0 | 220 | 308 | 1 | 89 | 1.09e-45 | 153 |
| MS.gene59231.t1 | MTR_7g011070 | 29.683 | 347 | 180 | 12 | 4 | 322 | 17 | 327 | 9.17e-35 | 135 |
| MS.gene59231.t1 | MTR_8g072130 | 54.386 | 114 | 18 | 1 | 306 | 419 | 1 | 80 | 7.94e-34 | 122 |
| MS.gene59231.t1 | MTR_6g012590 | 28.448 | 348 | 183 | 11 | 4 | 322 | 16 | 326 | 2.86e-33 | 130 |
| MS.gene59231.t1 | MTR_3g090960 | 28.736 | 348 | 184 | 13 | 4 | 323 | 16 | 327 | 7.90e-31 | 124 |
| MS.gene59231.t1 | MTR_3g090960 | 29.464 | 224 | 93 | 7 | 21 | 186 | 128 | 344 | 6.61e-16 | 80.1 |
| MS.gene59231.t1 | MTR_1g028440 | 29.310 | 348 | 182 | 12 | 4 | 323 | 16 | 327 | 8.80e-28 | 114 |
| MS.gene59231.t1 | MTR_1g028440 | 30.415 | 217 | 100 | 7 | 21 | 186 | 128 | 344 | 9.49e-16 | 79.0 |
| MS.gene59231.t1 | MTR_6g037520 | 67.308 | 52 | 17 | 0 | 329 | 380 | 78 | 129 | 3.27e-19 | 84.3 |
| MS.gene59231.t1 | MTR_3g090960 | 28.959 | 221 | 93 | 6 | 23 | 186 | 1 | 214 | 1.56e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59231.t1 | AT1G43190 | 79.861 | 432 | 63 | 3 | 1 | 420 | 1 | 420 | 0.0 | 695 |
| MS.gene59231.t1 | AT1G43190 | 79.861 | 432 | 63 | 3 | 1 | 420 | 1 | 420 | 0.0 | 695 |
| MS.gene59231.t1 | AT1G43190 | 79.398 | 432 | 63 | 4 | 1 | 420 | 1 | 418 | 0.0 | 686 |
| MS.gene59231.t1 | AT3G01150 | 28.846 | 364 | 194 | 13 | 4 | 337 | 15 | 343 | 6.79e-35 | 134 |
| MS.gene59231.t1 | AT3G01150 | 28.519 | 270 | 126 | 10 | 15 | 232 | 122 | 376 | 1.35e-13 | 72.4 |
| MS.gene59231.t1 | AT3G01150 | 29.697 | 330 | 173 | 11 | 4 | 309 | 15 | 309 | 7.54e-34 | 129 |
| MS.gene59231.t1 | AT5G53180 | 28.448 | 348 | 185 | 13 | 4 | 323 | 16 | 327 | 1.37e-30 | 122 |
| MS.gene59231.t1 | AT5G53180 | 31.132 | 212 | 95 | 8 | 21 | 181 | 128 | 339 | 9.41e-17 | 82.4 |
| MS.gene59231.t1 | AT5G53180 | 30.622 | 209 | 95 | 7 | 23 | 181 | 1 | 209 | 5.94e-18 | 84.3 |
| MS.gene59231.t1 | AT5G53180 | 30.288 | 208 | 95 | 7 | 24 | 181 | 18 | 225 | 8.19e-17 | 81.3 |
| MS.gene59231.t1 | AT5G53180 | 30.288 | 208 | 95 | 7 | 24 | 181 | 33 | 240 | 1.14e-16 | 80.9 |
| MS.gene59231.t1 | AT5G53180 | 30.288 | 208 | 95 | 7 | 24 | 181 | 32 | 239 | 1.15e-16 | 80.9 |
| MS.gene59231.t1 | AT5G53180 | 40.385 | 104 | 49 | 3 | 91 | 181 | 126 | 229 | 1.10e-13 | 72.0 |
| MS.gene59231.t1 | AT3G01150 | 28.736 | 261 | 119 | 10 | 24 | 232 | 6 | 251 | 5.72e-13 | 69.3 |
Find 101 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGTTCTCCCTTTA+TGG | 0.035664 | 1.4:+2235546 | MS.gene59231:CDS |
| GCGGCCATTGCAGCTGCTTT+TGG | 0.074456 | 1.4:+2235353 | MS.gene59231:CDS |
| TACGAACTTTGTAGGCTTTC+AGG | 0.175411 | 1.4:+2234013 | MS.gene59231:intron |
| TTCTGTTCTGTAGGGAGATT+TGG | 0.179215 | 1.4:-2234540 | None:intergenic |
| CTTCAGTTATTTCAACCTTT+TGG | 0.234793 | 1.4:+2231283 | MS.gene59231:CDS |
| AGCTGCAATGGCCGCAGCAT+TGG | 0.284533 | 1.4:-2235345 | None:intergenic |
| TTCTCACAATGTTTCCATAA+AGG | 0.300059 | 1.4:-2235560 | None:intergenic |
| TCTCACAATGTTTCCATAAA+GGG | 0.309290 | 1.4:-2235559 | None:intergenic |
| GCTGCAATGGCCGCAGCATT+GGG | 0.311225 | 1.4:-2235344 | None:intergenic |
| AAGCATGCTACCTCGCTTTC+TGG | 0.321751 | 1.4:+2236685 | MS.gene59231:CDS |
| TGGTTCCATGCTCCTCTAGA+AGG | 0.326729 | 1.4:-2236570 | None:intergenic |
| GGTTTGCCTCCTGGAATAAC+TGG | 0.333821 | 1.4:+2235380 | MS.gene59231:CDS |
| TACTGCAAGAACTGCACTTC+AGG | 0.342948 | 1.4:+2234070 | MS.gene59231:CDS |
| CAGAAGGAACGTCTTGCATT+TGG | 0.346584 | 1.4:-2231479 | None:intergenic |
| TCTGTTCTGTAGGGAGATTT+GGG | 0.347660 | 1.4:-2234539 | None:intergenic |
| AACTCTGTTGTGATTGATAC+TGG | 0.373607 | 1.4:-2234043 | None:intergenic |
| TCAGCACCTTGTGTTATGTT+TGG | 0.381551 | 1.4:-2236409 | None:intergenic |
| AGGAAGCATGTATGGTGTTC+AGG | 0.389056 | 1.4:+2234744 | MS.gene59231:CDS |
| ATACAGTACATCCACTGTTA+TGG | 0.393709 | 1.4:-2232108 | None:intergenic |
| ATGTATGGTGTTCAGGGTTC+TGG | 0.394858 | 1.4:+2234751 | MS.gene59231:CDS |
| AGCAAAGTATTTGAGATGAA+TGG | 0.395330 | 1.4:+2236601 | MS.gene59231:CDS |
| GCTCTTGATGAGATGAAAAC+TGG | 0.405496 | 1.4:-2231711 | None:intergenic |
| AAGAGTACCTTATGCTTGGC+TGG | 0.410645 | 1.4:-2231533 | None:intergenic |
| TCATTTGTCCCAGTTATTCC+AGG | 0.410874 | 1.4:-2235389 | None:intergenic |
| CATCTTCAGTGATGTCTTGT+GGG | 0.410989 | 1.4:-2236537 | None:intergenic |
| GAATTGTAACTAAGAGAATT+CGG | 0.415308 | 1.4:-2232070 | None:intergenic |
| CTTGGAAACCATCTCCCATC+TGG | 0.416528 | 1.4:-2235620 | None:intergenic |
| GAATAACTGGGACAAATGAT+AGG | 0.422703 | 1.4:+2235393 | MS.gene59231:CDS |
| GCAAAGTATTTGAGATGAAT+GGG | 0.425279 | 1.4:+2236602 | MS.gene59231:CDS |
| GTCATTCATGTTCGAAATGT+GGG | 0.433953 | 1.4:+2230561 | MS.gene59231:CDS |
| ACAAATGAATCATCTTCGTT+GGG | 0.440370 | 1.4:-2236507 | None:intergenic |
| CAGGGTTCTGGACCCAGGGC+AGG | 0.442597 | 1.4:+2234763 | MS.gene59231:CDS |
| TGCTACCTCGCTTTCTGGCT+CGG | 0.444036 | 1.4:+2236690 | MS.gene59231:CDS |
| ATTATAATAATGACCGTTCA+AGG | 0.444162 | 1.4:+2234419 | MS.gene59231:CDS |
| AGATGGTTTCCAAGCTGAAC+TGG | 0.446354 | 1.4:+2235629 | MS.gene59231:CDS |
| AGGTAGCATGCTTGCATACA+AGG | 0.447408 | 1.4:-2236675 | None:intergenic |
| TCAGTTTGAGACTGAGGATC+AGG | 0.451143 | 1.4:+2236642 | MS.gene59231:CDS |
| GTGTTCAGGGTTCTGGACCC+AGG | 0.453204 | 1.4:+2234758 | MS.gene59231:CDS |
| TTATGATGGTTGCTGTCAGC+TGG | 0.464841 | 1.4:+2234197 | MS.gene59231:CDS |
| GGCCTGCCTTTCTGTTCTGT+AGG | 0.467800 | 1.4:-2234549 | None:intergenic |
| CGAACATGAATGACCTTGGA+AGG | 0.468919 | 1.4:-2230552 | None:intergenic |
| GACAAATGAATCATCTTCGT+TGG | 0.470970 | 1.4:-2236508 | None:intergenic |
| TACAGTACATCCACTGTTAT+GGG | 0.471701 | 1.4:-2232107 | None:intergenic |
| TAGGGTCGCAATATTTATGA+TGG | 0.475560 | 1.4:+2234183 | MS.gene59231:intron |
| CAGCTTGGATATGGTGATGC+AGG | 0.477074 | 1.4:+2234724 | MS.gene59231:intron |
| AATTCACTTGTAATTCATCA+AGG | 0.483108 | 1.4:-2234399 | None:intergenic |
| TCTGTGAAACAGCTTGGATA+TGG | 0.488413 | 1.4:+2234715 | MS.gene59231:intron |
| GTAACTAAGAGAATTCGGTT+TGG | 0.488756 | 1.4:-2232065 | None:intergenic |
| GTTAAATTTAGCACCTGCCC+TGG | 0.490169 | 1.4:-2234776 | None:intergenic |
| GCCTGCCTTTCTGTTCTGTA+GGG | 0.494453 | 1.4:-2234548 | None:intergenic |
| ATCTGGATAAGTGCATGATC+TGG | 0.502751 | 1.4:-2235603 | None:intergenic |
| GGAAGCATGTATGGTGTTCA+GGG | 0.508233 | 1.4:+2234745 | MS.gene59231:CDS |
| AGCTTTGTGATGACTCCAAA+AGG | 0.509921 | 1.4:-2231298 | None:intergenic |
| AGCTAAGAGTACCTTATGCT+TGG | 0.512139 | 1.4:-2231537 | None:intergenic |
| CCTCAGTCTCAAACTGAACC+AGG | 0.518672 | 1.4:-2236636 | None:intergenic |
| GGTGATGCAGGAAGCATGTA+TGG | 0.523701 | 1.4:+2234736 | MS.gene59231:CDS |
| TCATCTTCAGTGATGTCTTG+TGG | 0.524428 | 1.4:-2236538 | None:intergenic |
| GCACTTATCCAGATGGGAGA+TGG | 0.531925 | 1.4:+2235612 | MS.gene59231:CDS |
| TATCATGGCTGAACCTTCCA+AGG | 0.532831 | 1.4:+2230539 | None:intergenic |
| AGAGTACCTTATGCTTGGCT+GGG | 0.540483 | 1.4:-2231532 | None:intergenic |
| ATTTCGAACATGAATGACCT+TGG | 0.541812 | 1.4:-2230556 | None:intergenic |
| TAGCAGCGTTACGATTAAAA+CGG | 0.543089 | 1.4:-2236462 | None:intergenic |
| GAAACACCCAGCCAAGCATA+AGG | 0.545572 | 1.4:+2231526 | MS.gene59231:CDS |
| TGTTCAGGGTTCTGGACCCA+GGG | 0.546711 | 1.4:+2234759 | MS.gene59231:CDS |
| TCCCTACAGAACAGAAAGGC+AGG | 0.547542 | 1.4:+2234547 | MS.gene59231:CDS |
| AAATACTTTGCTATTGACAA+TGG | 0.551736 | 1.4:-2236590 | None:intergenic |
| GGTCATTCATGTTCGAAATG+TGG | 0.557701 | 1.4:+2230560 | MS.gene59231:CDS |
| TTAAATTTAGCACCTGCCCT+GGG | 0.559061 | 1.4:-2234775 | None:intergenic |
| AGTGTACAGCCAGTTCAGCT+TGG | 0.569092 | 1.4:-2235638 | None:intergenic |
| AGTGATGTCTTGTGGGAGTG+TGG | 0.570311 | 1.4:-2236530 | None:intergenic |
| TGTAAAGCACTAACTGCAGA+AGG | 0.572096 | 1.4:-2231495 | None:intergenic |
| AGATCATGCACTTATCCAGA+TGG | 0.574543 | 1.4:+2235605 | MS.gene59231:CDS |
| CCTTCCAGTCGGATATCCAC+AGG | 0.574783 | 1.4:+2234874 | MS.gene59231:intron |
| GAATGGGAAGAAACAAGGCC+TGG | 0.576914 | 1.4:+2236618 | MS.gene59231:CDS |
| GGTTCCATGCTCCTCTAGAA+GGG | 0.591822 | 1.4:-2236569 | None:intergenic |
| GAGATGAATGGGAAGAAACA+AGG | 0.597286 | 1.4:+2236613 | MS.gene59231:CDS |
| CCTGGTTCAGTTTGAGACTG+AGG | 0.597497 | 1.4:+2236636 | MS.gene59231:CDS |
| GATCATGCACTTATCCAGAT+GGG | 0.599793 | 1.4:+2235606 | MS.gene59231:CDS |
| AGAGACTGAATCACCTTGAA+CGG | 0.607191 | 1.4:-2234432 | None:intergenic |
| AATTACCGAGCCAGAAAGCG+AGG | 0.607510 | 1.4:-2236695 | None:intergenic |
| ACTGGCTGTACACTTTCTGA+AGG | 0.611721 | 1.4:+2235647 | MS.gene59231:CDS |
| TGAGATTGTGACCCTTCTAG+AGG | 0.616426 | 1.4:+2236558 | MS.gene59231:CDS |
| AAGTCAAGGACGAGGAGATG+AGG | 0.618331 | 1.4:+2231750 | MS.gene59231:CDS |
| GTGACCCTTCTAGAGGAGCA+TGG | 0.626740 | 1.4:+2236565 | MS.gene59231:CDS |
| GTTTGCCTCCTGGAATAACT+GGG | 0.627364 | 1.4:+2235381 | MS.gene59231:CDS |
| AATCTCCCTACAGAACAGAA+AGG | 0.630603 | 1.4:+2234543 | MS.gene59231:CDS |
| GTTGTTTGATAAGCGACTAG+AGG | 0.641453 | 1.4:+2236369 | MS.gene59231:CDS |
| ACAACAATAGATCAAAGTCA+AGG | 0.643404 | 1.4:+2231736 | MS.gene59231:CDS |
| GGTAGCATGCTTGCATACAA+GGG | 0.647100 | 1.4:-2236674 | None:intergenic |
| CAAACGAAACATACTTGTGG+AGG | 0.658477 | 1.4:-2234570 | None:intergenic |
| CAAATGAATCATCTTCGTTG+GGG | 0.661543 | 1.4:-2236506 | None:intergenic |
| TCGTTGGGGAGCAGCAATAG+CGG | 0.661679 | 1.4:-2236492 | None:intergenic |
| TCATTCATGTTCGAAATGTG+GGG | 0.666929 | 1.4:+2230562 | MS.gene59231:CDS |
| TTTGTCCCAGTTATTCCAGG+AGG | 0.668050 | 1.4:-2235386 | None:intergenic |
| ATAGATCAAAGTCAAGGACG+AGG | 0.680422 | 1.4:+2231742 | MS.gene59231:CDS |
| AAGCATCCAAACATAACACA+AGG | 0.689131 | 1.4:+2236403 | MS.gene59231:CDS |
| ACTGTAGATGCCCAATGCTG+CGG | 0.690338 | 1.4:+2235334 | MS.gene59231:intron |
| CGTGCTCTATCCCATAACAG+TGG | 0.694871 | 1.4:+2232097 | MS.gene59231:CDS |
| TGTGGGGCACGAAATATCCG+AGG | 0.714184 | 1.4:+2230578 | MS.gene59231:CDS |
| TAGTCGCTTATCAAACAACA+TGG | 0.721208 | 1.4:-2236365 | None:intergenic |
| ATCTTCTCCACAGATCCATG+AGG | 0.742999 | 1.4:-2232144 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTACTTTAATTTCTTATA+TGG | + | chr1.4:2234356-2234375 | MS.gene59231:intron | 10.0% |
| !!! | CTAATTATCTTTTTATTTTA+GGG | + | chr1.4:2231672-2231691 | MS.gene59231:intron | 10.0% |
| !!! | TAATTATCTTTTTATTTTAG+GGG | + | chr1.4:2231673-2231692 | MS.gene59231:intron | 10.0% |
| !!! | TCTAATTATCTTTTTATTTT+AGG | + | chr1.4:2231671-2231690 | MS.gene59231:intron | 10.0% |
| !!! | TTTGTAATTACATTTTTATA+TGG | + | chr1.4:2233905-2233924 | MS.gene59231:intron | 10.0% |
| !!! | TTTTTTTTTAAAATGTTTAG+TGG | + | chr1.4:2233845-2233864 | MS.gene59231:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTAG+CGG | + | chr1.4:2233775-2233794 | MS.gene59231:intron | 10.0% |
| !! | AAAAAAATAAGAGAATAGAA+CGG | - | chr1.4:2235288-2235307 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr1.4:2232697-2232716 | None:intergenic | 15.0% |
| !! | AATCTTATAAATAGAAAAGA+GGG | - | chr1.4:2236312-2236331 | None:intergenic | 15.0% |
| !! | AATTAAAGTAAATAAGAGAA+AGG | - | chr1.4:2234349-2234368 | None:intergenic | 15.0% |
| !! | AATTCAGAAAAAAACTTAAA+AGG | - | chr1.4:2232234-2232253 | None:intergenic | 15.0% |
| !! | ACTTTGTTAAAAAAAAAATC+AGG | - | chr1.4:2236113-2236132 | None:intergenic | 15.0% |
| !! | ATTCAGAAAAAAACTTAAAA+GGG | - | chr1.4:2232233-2232252 | None:intergenic | 15.0% |
| !! | ATTTAAGTAAATGATTTACA+TGG | - | chr1.4:2235963-2235982 | None:intergenic | 15.0% |
| !! | GAATATTTAATTATAATACC+AGG | + | chr1.4:2235692-2235711 | MS.gene59231:intron | 15.0% |
| !! | TTATAATTAAATATTCAGCA+AGG | - | chr1.4:2235688-2235707 | None:intergenic | 15.0% |
| !!! | AATTATCTTTTTATTTTAGG+GGG | + | chr1.4:2231674-2231693 | MS.gene59231:intron | 15.0% |
| !!! | AATTGTTGTGTTTTTTTTTT+TGG | + | chr1.4:2230694-2230713 | MS.gene59231:intron | 15.0% |
| !!! | ATGTGTTAAATAATATGTTT+TGG | + | chr1.4:2236155-2236174 | MS.gene59231:intron | 15.0% |
| !!! | ATTATTTTCTTAATTTTGGT+CGG | + | chr1.4:2235797-2235816 | MS.gene59231:intron | 15.0% |
| !!! | ATTGTTGTGTTTTTTTTTTT+GGG | + | chr1.4:2230695-2230714 | MS.gene59231:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr1.4:2232696-2232715 | MS.gene59231:intron | 15.0% |
| !!! | TTTTTTTTTTTATGTTTAGC+GGG | + | chr1.4:2233776-2233795 | MS.gene59231:intron | 15.0% |
| !! | AAAAAATTCCACAAATTGAT+TGG | - | chr1.4:2235061-2235080 | None:intergenic | 20.0% |
| !! | AAAAATGTAATTACAAAGCA+AGG | - | chr1.4:2233902-2233921 | None:intergenic | 20.0% |
| !! | AAAAGATAATTAGATTGTTC+CGG | - | chr1.4:2231665-2231684 | None:intergenic | 20.0% |
| !! | AAAATGTAATTACAAAGCAA+GGG | - | chr1.4:2233901-2233920 | None:intergenic | 20.0% |
| !! | AAACAAACAATTTCATTTGA+AGG | - | chr1.4:2231364-2231383 | None:intergenic | 20.0% |
| !! | AAGTATATGATAAAGAGAAA+AGG | - | chr1.4:2231967-2231986 | None:intergenic | 20.0% |
| !! | ACTTCTAAATGAATTTCTAA+AGG | + | chr1.4:2233740-2233759 | MS.gene59231:intron | 20.0% |
| !! | CAATCTTATAAATAGAAAAG+AGG | - | chr1.4:2236313-2236332 | None:intergenic | 20.0% |
| !! | CCAATTAATATTAAAATCTC+CGG | + | chr1.4:2231643-2231662 | MS.gene59231:intron | 20.0% |
| !! | TCTAAATAATTTCTGTGTAT+TGG | + | chr1.4:2234250-2234269 | MS.gene59231:intron | 20.0% |
| !! | TGTATTTGTAATAGTATGTT+TGG | - | chr1.4:2233579-2233598 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTAAGTTGTTAA+TGG | - | chr1.4:2232378-2232397 | None:intergenic | 20.0% |
| !!! | AGTATGATTTTTTAGAAATC+TGG | + | chr1.4:2235239-2235258 | MS.gene59231:intron | 20.0% |
| !!! | ATTTTATTTGATGCATGTAT+AGG | + | chr1.4:2233955-2233974 | MS.gene59231:intron | 20.0% |
| !!! | CTAAATATTGATTGAAACTT+TGG | + | chr1.4:2234153-2234172 | MS.gene59231:intron | 20.0% |
| !!! | CTTTATTTATCTGTTATGAA+TGG | + | chr1.4:2234626-2234645 | MS.gene59231:intron | 20.0% |
| !!! | TAACATTTTCTTTCTGTTTT+TGG | + | chr1.4:2234098-2234117 | MS.gene59231:intron | 20.0% |
| !!! | TTTAGTTTATTCAGATTTGA+TGG | - | chr1.4:2236264-2236283 | None:intergenic | 20.0% |
| !!! | TTTATTTGCTTTTCAAATCT+GGG | + | chr1.4:2235123-2235142 | MS.gene59231:intron | 20.0% |
| !!! | TTTTAGATATTGATTGTGAT+TGG | + | chr1.4:2230823-2230842 | MS.gene59231:intron | 20.0% |
| ! | AAAAATGTGTAATGGTTGTA+AGG | + | chr1.4:2234999-2235018 | MS.gene59231:intron | 25.0% |
| ! | AAACAAATTTCGAGCTAAAT+AGG | - | chr1.4:2235498-2235517 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1.4:2233441-2233460 | MS.gene59231:intron | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr1.4:2232690-2232709 | None:intergenic | 25.0% |
| ! | AATTCACTTGTAATTCATCA+AGG | - | chr1.4:2234402-2234421 | None:intergenic | 25.0% |
| ! | AGATAACAATACAAAGATCT+AGG | - | chr1.4:2231890-2231909 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr1.4:2232689-2232708 | None:intergenic | 25.0% |
| ! | AGTAAATAAGAGAAAGGAAA+AGG | - | chr1.4:2234343-2234362 | None:intergenic | 25.0% |
| ! | ATAACAATACAAAGATCTAG+GGG | - | chr1.4:2231888-2231907 | None:intergenic | 25.0% |
| ! | ATTATAATAATGACCGTTCA+AGG | + | chr1.4:2234419-2234438 | MS.gene59231:CDS | 25.0% |
| ! | GAATTGTAACTAAGAGAATT+CGG | - | chr1.4:2232073-2232092 | None:intergenic | 25.0% |
| ! | GATAACAATACAAAGATCTA+GGG | - | chr1.4:2231889-2231908 | None:intergenic | 25.0% |
| ! | GATCTTTGTATTGTTATCTT+AGG | + | chr1.4:2231891-2231910 | MS.gene59231:intron | 25.0% |
| ! | GCAAAAGTTATAAATCTTTC+AGG | - | chr1.4:2231240-2231259 | None:intergenic | 25.0% |
| ! | GCAACATTAAAAATGTGTAA+TGG | + | chr1.4:2234991-2235010 | MS.gene59231:intron | 25.0% |
| ! | TATTCCACACAATATACAAA+GGG | - | chr1.4:2236035-2236054 | None:intergenic | 25.0% |
| ! | TCACTTTCTCTAATTATTAC+CGG | + | chr1.4:2230971-2230990 | MS.gene59231:intron | 25.0% |
| ! | TGATATCAAAACAATAGTTG+TGG | - | chr1.4:2231579-2231598 | None:intergenic | 25.0% |
| ! | TTATTCCACACAATATACAA+AGG | - | chr1.4:2236036-2236055 | None:intergenic | 25.0% |
| ! | TTGAATAAGTATAAGCATAG+TGG | + | chr1.4:2233627-2233646 | MS.gene59231:intron | 25.0% |
| ! | TTTATACAACGATAAATCTC+TGG | - | chr1.4:2235778-2235797 | None:intergenic | 25.0% |
| !! | AGGATCTATTTTATAAGTAG+AGG | + | chr1.4:2236068-2236087 | MS.gene59231:intron | 25.0% |
| !! | GAAAGAAAAAACCTGATTTT+TGG | - | chr1.4:2231338-2231357 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr1.4:2233424-2233443 | None:intergenic | 25.0% |
| !! | TGAAACTTTGGAAATTTCTA+GGG | + | chr1.4:2234165-2234184 | MS.gene59231:intron | 25.0% |
| !! | TGATGTTGTTTGTATGTAAT+AGG | + | chr1.4:2233694-2233713 | MS.gene59231:intron | 25.0% |
| !! | TTGAAACTTTGGAAATTTCT+AGG | + | chr1.4:2234164-2234183 | MS.gene59231:intron | 25.0% |
| !!! | AAATACTTTGCTATTGACAA+TGG | - | chr1.4:2236593-2236612 | None:intergenic | 25.0% |
| !!! | AATTTTAACAGAGTGAATTG+AGG | + | chr1.4:2232250-2232269 | MS.gene59231:intron | 25.0% |
| !!! | AGATTTTCATTTTGAGATGT+AGG | + | chr1.4:2236339-2236358 | MS.gene59231:intron | 25.0% |
| !!! | ATGTTTTTATGACTATGCTA+TGG | + | chr1.4:2230668-2230687 | MS.gene59231:intron | 25.0% |
| !!! | CCGGAGATTTTAATATTAAT+TGG | - | chr1.4:2231646-2231665 | None:intergenic | 25.0% |
| !!! | CTAAATTTAACTGATTTGGT+TGG | + | chr1.4:2234788-2234807 | MS.gene59231:intron | 25.0% |
| !!! | GATTTTCATTTTGAGATGTA+GGG | + | chr1.4:2236340-2236359 | MS.gene59231:intron | 25.0% |
| !!! | GTTTATTTGCTTTTCAAATC+TGG | + | chr1.4:2235122-2235141 | MS.gene59231:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1.4:2233299-2233318 | MS.gene59231:intron | 25.0% |
| AAAACAAGAACTAACAAGTC+CGG | - | chr1.4:2234129-2234148 | None:intergenic | 30.0% | |
| AAATCACATTTCTCTTTCTC+TGG | + | chr1.4:2235924-2235943 | MS.gene59231:intron | 30.0% | |
| ACAAATGAATCATCTTCGTT+GGG | - | chr1.4:2236510-2236529 | None:intergenic | 30.0% | |
| ACAACAATAGATCAAAGTCA+AGG | + | chr1.4:2231736-2231755 | MS.gene59231:CDS | 30.0% | |
| ACGCATTATGCATGAATTAA+TGG | + | chr1.4:2233816-2233835 | MS.gene59231:intron | 30.0% | |
| AGGTACTCTATCATATATGA+AGG | - | chr1.4:2232509-2232528 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr1.4:2232959-2232978 | None:intergenic | 30.0% | |
| ATATGAAAAATACTCACCTG+TGG | - | chr1.4:2234893-2234912 | None:intergenic | 30.0% | |
| ATGATCTTTGTCATCACATA+CGG | + | chr1.4:2231598-2231617 | MS.gene59231:intron | 30.0% | |
| CAGCAAACAACAATTACTTA+TGG | - | chr1.4:2235737-2235756 | None:intergenic | 30.0% | |
| CGCACATTCAAAACAAAAAA+TGG | - | chr1.4:2230852-2230871 | None:intergenic | 30.0% | |
| GGATATTCAATTCTCAAAGT+AGG | + | chr1.4:2234218-2234237 | MS.gene59231:intron | 30.0% | |
| GGTACTCTATCATATATGAA+GGG | - | chr1.4:2232508-2232527 | None:intergenic | 30.0% | |
| GGTGCTAAATTTAACTGATT+TGG | + | chr1.4:2234784-2234803 | MS.gene59231:intron | 30.0% | |
| GTAAATTCATCAAGTAAACC+TGG | - | chr1.4:2235713-2235732 | None:intergenic | 30.0% | |
| GTAATGGTTGTAAGGTATAA+CGG | + | chr1.4:2235007-2235026 | MS.gene59231:intron | 30.0% | |
| GTCACAGTTTGATATTATTC+TGG | + | chr1.4:2234922-2234941 | MS.gene59231:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr1.4:2233481-2233500 | None:intergenic | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | + | chr1.4:2232867-2232886 | MS.gene59231:intron | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | - | chr1.4:2232647-2232666 | None:intergenic | 30.0% | |
| TCAGTTGTAATATTCTGACA+TGG | + | chr1.4:2236222-2236241 | MS.gene59231:intron | 30.0% | |
| TCTCACAATGTTTCCATAAA+GGG | - | chr1.4:2235562-2235581 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr1.4:2233488-2233507 | MS.gene59231:intron | 30.0% | |
| TGGAATAAGATTGCAATTGA+AGG | + | chr1.4:2236048-2236067 | MS.gene59231:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr1.4:2232887-2232906 | MS.gene59231:intron | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1.4:2233485-2233504 | MS.gene59231:intron | 30.0% | |
| TGTTATGCTACTATGAGAAT+TGG | - | chr1.4:2233672-2233691 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr1.4:2232962-2232981 | MS.gene59231:intron | 30.0% | |
| TTCATCACAAGTTTCTTTGA+TGG | + | chr1.4:2235844-2235863 | MS.gene59231:intron | 30.0% | |
| TTCTCACAATGTTTCCATAA+AGG | - | chr1.4:2235563-2235582 | None:intergenic | 30.0% | |
| TTTCAAATCTGGGTTTGATA+GGG | + | chr1.4:2235133-2235152 | MS.gene59231:intron | 30.0% | |
| TTTGTATGTAATAGGCACAT+AGG | + | chr1.4:2233702-2233721 | MS.gene59231:intron | 30.0% | |
| ! | AGCAAAGTATTTGAGATGAA+TGG | + | chr1.4:2236601-2236620 | MS.gene59231:CDS | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1.4:2233446-2233465 | None:intergenic | 30.0% |
| ! | GCAAAGTATTTGAGATGAAT+GGG | + | chr1.4:2236602-2236621 | MS.gene59231:CDS | 30.0% |
| ! | GTTAGTGCTTTACAGTTTTA+TGG | + | chr1.4:2231504-2231523 | MS.gene59231:CDS | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1.4:2233295-2233314 | None:intergenic | 30.0% |
| ! | TTTTCAAATCTGGGTTTGAT+AGG | + | chr1.4:2235132-2235151 | MS.gene59231:intron | 30.0% |
| !! | ACTTTTTCTTAGACCATGAT+CGG | + | chr1.4:2231177-2231196 | MS.gene59231:intron | 30.0% |
| !! | ATAATTTCTGTGTATTGGCT+TGG | + | chr1.4:2234255-2234274 | MS.gene59231:intron | 30.0% |
| !! | CTTCAGTTATTTCAACCTTT+TGG | + | chr1.4:2231283-2231302 | MS.gene59231:CDS | 30.0% |
| !! | TGGAGCACTTTTAAATTCTA+AGG | - | chr1.4:2231388-2231407 | None:intergenic | 30.0% |
| !! | TTTTAGAAATTTCTTCGCAG+TGG | + | chr1.4:2230786-2230805 | MS.gene59231:intron | 30.0% |
| !!! | ATCAAGTTTTTTTCTCCTCA+TGG | + | chr1.4:2232129-2232148 | MS.gene59231:CDS | 30.0% |
| !!! | TATCTTTTTATTTTAGGGGG+AGG | + | chr1.4:2231677-2231696 | MS.gene59231:intron | 30.0% |
| !!! | TGTTTTGAGTTTCTGTTTCT+TGG | + | chr1.4:2235170-2235189 | MS.gene59231:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr1.4:2232708-2232727 | MS.gene59231:intron | 30.0% |
| AAATCATTCTGCAATCACAG+TGG | - | chr1.4:2231262-2231281 | None:intergenic | 35.0% | |
| AACTCTGTTGTGATTGATAC+TGG | - | chr1.4:2234046-2234065 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr1.4:2232895-2232914 | MS.gene59231:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr1.4:2233096-2233115 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1.4:2233369-2233388 | MS.gene59231:intron | 35.0% | |
| AAGAGAAAGGAAAAGGTAGA+AGG | - | chr1.4:2234336-2234355 | None:intergenic | 35.0% | |
| AAGAGAAGAGATAGAGAGAA+AGG | - | chr1.4:2232003-2232022 | None:intergenic | 35.0% | |
| AAGCATCCAAACATAACACA+AGG | + | chr1.4:2236403-2236422 | MS.gene59231:CDS | 35.0% | |
| AAGGGAAAGAAAGAAGAGAA+AGG | - | chr1.4:2232215-2232234 | None:intergenic | 35.0% | |
| AATAGGCACATAGGAGAAAA+AGG | + | chr1.4:2233711-2233730 | MS.gene59231:intron | 35.0% | |
| ACATTTCTCTTTCTCTGGTT+CGG | + | chr1.4:2235929-2235948 | MS.gene59231:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr1.4:2232896-2232915 | MS.gene59231:intron | 35.0% | |
| AGAGAAAGAAAGTGAGAATC+AGG | - | chr1.4:2230610-2230629 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1.4:2233453-2233472 | MS.gene59231:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1.4:2233288-2233307 | MS.gene59231:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr1.4:2233100-2233119 | MS.gene59231:intron | 35.0% | |
| AGGGAAAGAAAGAAGAGAAA+GGG | - | chr1.4:2232214-2232233 | None:intergenic | 35.0% | |
| ATACAGTACATCCACTGTTA+TGG | - | chr1.4:2232111-2232130 | None:intergenic | 35.0% | |
| ATAGGCACATAGGAGAAAAA+GGG | + | chr1.4:2233712-2233731 | MS.gene59231:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr1.4:2232947-2232966 | MS.gene59231:intron | 35.0% | |
| ATTTCGAACATGAATGACCT+TGG | - | chr1.4:2230559-2230578 | None:intergenic | 35.0% | |
| CAAATGAATCATCTTCGTTG+GGG | - | chr1.4:2236509-2236528 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr1.4:2233313-2233332 | MS.gene59231:intron | 35.0% | |
| GAATAACTGGGACAAATGAT+AGG | + | chr1.4:2235393-2235412 | MS.gene59231:CDS | 35.0% | |
| GACAAATGAATCATCTTCGT+TGG | - | chr1.4:2236511-2236530 | None:intergenic | 35.0% | |
| GAGAAAGAAAGTGAGAATCA+GGG | - | chr1.4:2230609-2230628 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr1.4:2232960-2232979 | None:intergenic | 35.0% | |
| GATTGTAGCCAATCAATTTG+TGG | + | chr1.4:2235050-2235069 | MS.gene59231:intron | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1.4:2233366-2233385 | MS.gene59231:intron | 35.0% | |
| GTAACTAAGAGAATTCGGTT+TGG | - | chr1.4:2232068-2232087 | None:intergenic | 35.0% | |
| GTAGTACTAGTTGTTGTGTT+TGG | + | chr1.4:2236131-2236150 | MS.gene59231:intron | 35.0% | |
| GTCATTCATGTTCGAAATGT+GGG | + | chr1.4:2230561-2230580 | MS.gene59231:CDS | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr1.4:2232961-2232980 | MS.gene59231:intron | 35.0% | |
| TAACAGTGTCCAAGTACTAA+TGG | - | chr1.4:2232353-2232372 | None:intergenic | 35.0% | |
| TACAGTACATCCACTGTTAT+GGG | - | chr1.4:2232110-2232129 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | + | chr1.4:2233022-2233041 | MS.gene59231:intron | 35.0% | |
| TACTTGCTTACGAACTTTGT+AGG | + | chr1.4:2234005-2234024 | MS.gene59231:intron | 35.0% | |
| TAGCAGCGTTACGATTAAAA+CGG | - | chr1.4:2236465-2236484 | None:intergenic | 35.0% | |
| TAGGGTCGCAATATTTATGA+TGG | + | chr1.4:2234183-2234202 | MS.gene59231:intron | 35.0% | |
| TAGTCGCTTATCAAACAACA+TGG | - | chr1.4:2236368-2236387 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr1.4:2232958-2232977 | None:intergenic | 35.0% | |
| TCATTCATGTTCGAAATGTG+GGG | + | chr1.4:2230562-2230581 | MS.gene59231:CDS | 35.0% | |
| TGATCCCTTTGTATATTGTG+TGG | + | chr1.4:2236028-2236047 | MS.gene59231:intron | 35.0% | |
| TGGATAAGTGCCTGTAAATA+CGG | - | chr1.4:2231462-2231481 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr1.4:2233308-2233327 | MS.gene59231:intron | 35.0% | |
| TGTGAAATAAATGCCGATCA+TGG | - | chr1.4:2231193-2231212 | None:intergenic | 35.0% | |
| TTAGGCTGTTACATTTCAGT+GGG | + | chr1.4:2231909-2231928 | MS.gene59231:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1.4:2233365-2233384 | None:intergenic | 35.0% | |
| TTGGCTACAATCGTAAAACT+TGG | - | chr1.4:2235042-2235061 | None:intergenic | 35.0% | |
| TTTCCTGATAAAAAGAGTCC+AGG | - | chr1.4:2230760-2230779 | None:intergenic | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr1.4:2233087-2233106 | MS.gene59231:intron | 35.0% |
| ! | AGTTTCTGTTTCTTGGACAA+TGG | + | chr1.4:2235177-2235196 | MS.gene59231:intron | 35.0% |
| ! | ATAAGCATAGTGGTGTCAAT+TGG | + | chr1.4:2233637-2233656 | MS.gene59231:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1.4:2233465-2233484 | MS.gene59231:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr1.4:2232646-2232665 | MS.gene59231:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr1.4:2232754-2232773 | None:intergenic | 35.0% |
| ! | TTCAACTTGTTCTCCCTTTA+TGG | + | chr1.4:2235546-2235565 | MS.gene59231:CDS | 35.0% |
| ! | TTGATGGCACTAAACAATGT+TGG | - | chr1.4:2236248-2236267 | None:intergenic | 35.0% |
| !! | AAAGAGAAAGCACTTACATC+AGG | - | chr1.4:2235446-2235465 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr1.4:2232578-2232597 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr1.4:2232989-2233008 | None:intergenic | 35.0% |
| !!! | CTTTCTGTTTTTGGCTTTAC+CGG | + | chr1.4:2234107-2234126 | MS.gene59231:intron | 35.0% |
| AAGGAAAAGGTAGAAGGTTG+AGG | - | chr1.4:2234330-2234349 | None:intergenic | 40.0% | |
| AATCTCCCTACAGAACAGAA+AGG | + | chr1.4:2234543-2234562 | MS.gene59231:CDS | 40.0% | |
| AATCTGGGTTTGATAGGGAA+AGG | + | chr1.4:2235138-2235157 | MS.gene59231:intron | 40.0% | |
| AATGTGTGAGCCGTATTTAC+AGG | + | chr1.4:2231449-2231468 | MS.gene59231:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr1.4:2233263-2233282 | MS.gene59231:intron | 40.0% | |
| ACCAAGAGGGTGAATGAAAA+GGG | + | chr1.4:2230730-2230749 | MS.gene59231:intron | 40.0% | |
| ACTTCGCAAAGATCAATGAG+AGG | - | chr1.4:2234655-2234674 | None:intergenic | 40.0% | |
| AGAGACTGAATCACCTTGAA+CGG | - | chr1.4:2234435-2234454 | None:intergenic | 40.0% | |
| AGATCATGCACTTATCCAGA+TGG | + | chr1.4:2235605-2235624 | MS.gene59231:CDS | 40.0% | |
| AGCCAAACGAAACATACTTG+TGG | - | chr1.4:2234576-2234595 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr1.4:2232585-2232604 | MS.gene59231:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1.4:2233394-2233413 | MS.gene59231:intron | 40.0% | |
| AGTGTCCAAGTACTAATGGT+GGG | - | chr1.4:2232349-2232368 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr1.4:2232658-2232677 | MS.gene59231:intron | 40.0% | |
| ATAGATCAAAGTCAAGGACG+AGG | + | chr1.4:2231742-2231761 | MS.gene59231:CDS | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr1.4:2232926-2232945 | None:intergenic | 40.0% | |
| ATCTGGATAAGTGCATGATC+TGG | - | chr1.4:2235606-2235625 | None:intergenic | 40.0% | |
| ATCTGGGTTTGATAGGGAAA+GGG | + | chr1.4:2235139-2235158 | MS.gene59231:intron | 40.0% | |
| CAAACGAAACATACTTGTGG+AGG | - | chr1.4:2234573-2234592 | None:intergenic | 40.0% | |
| CAATGTGTCAATGTCGTGTT+CGG | + | chr1.4:2230997-2231016 | MS.gene59231:intron | 40.0% | |
| CATCTTCAGTGATGTCTTGT+GGG | - | chr1.4:2236540-2236559 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr1.4:2232587-2232606 | MS.gene59231:intron | 40.0% | |
| CTCCACAAGTATGTTTCGTT+TGG | + | chr1.4:2234571-2234590 | MS.gene59231:intron | 40.0% | |
| CTTACAAAAGCAGGCAGAAT+TGG | + | chr1.4:2231831-2231850 | MS.gene59231:intron | 40.0% | |
| CTTAGGCTGTTACATTTCAG+TGG | + | chr1.4:2231908-2231927 | MS.gene59231:intron | 40.0% | |
| GAACTTGACATTGACCAAGA+GGG | + | chr1.4:2230717-2230736 | MS.gene59231:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr1.4:2233262-2233281 | MS.gene59231:intron | 40.0% | |
| GAGATGAATGGGAAGAAACA+AGG | + | chr1.4:2236613-2236632 | MS.gene59231:CDS | 40.0% | |
| GATCATGCACTTATCCAGAT+GGG | + | chr1.4:2235606-2235625 | MS.gene59231:CDS | 40.0% | |
| GATGTTACGTGCCAAAAATC+AGG | + | chr1.4:2231324-2231343 | MS.gene59231:CDS | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr1.4:2232586-2232605 | MS.gene59231:intron | 40.0% | |
| GCTCTTGATGAGATGAAAAC+TGG | - | chr1.4:2231714-2231733 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr1.4:2232529-2232548 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr1.4:2232982-2233001 | MS.gene59231:intron | 40.0% | |
| GGTCATTCATGTTCGAAATG+TGG | + | chr1.4:2230560-2230579 | MS.gene59231:CDS | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr1.4:2233021-2233040 | MS.gene59231:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr1.4:2233230-2233249 | MS.gene59231:intron | 40.0% | |
| GTTGTTTGATAAGCGACTAG+AGG | + | chr1.4:2236369-2236388 | MS.gene59231:CDS | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr1.4:2232659-2232678 | MS.gene59231:intron | 40.0% | |
| TACGAACTTTGTAGGCTTTC+AGG | + | chr1.4:2234013-2234032 | MS.gene59231:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr1.4:2232588-2232607 | MS.gene59231:intron | 40.0% | |
| TCAGCACCTTGTGTTATGTT+TGG | - | chr1.4:2236412-2236431 | None:intergenic | 40.0% | |
| TCATCTTCAGTGATGTCTTG+TGG | - | chr1.4:2236541-2236560 | None:intergenic | 40.0% | |
| TCATCTTCTGTGAAACAGCT+TGG | + | chr1.4:2234709-2234728 | MS.gene59231:intron | 40.0% | |
| TCATTTGTCCCAGTTATTCC+AGG | - | chr1.4:2235392-2235411 | None:intergenic | 40.0% | |
| TCGAATGTAATCACGTGTGT+CGG | - | chr1.4:2230946-2230965 | None:intergenic | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr1.4:2232919-2232938 | MS.gene59231:intron | 40.0% | |
| TCTGTGAAACAGCTTGGATA+TGG | + | chr1.4:2234715-2234734 | MS.gene59231:intron | 40.0% | |
| TCTGTTCTGTAGGGAGATTT+GGG | - | chr1.4:2234542-2234561 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr1.4:2233261-2233280 | MS.gene59231:intron | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr1.4:2232573-2232592 | MS.gene59231:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr1.4:2232658-2232677 | None:intergenic | 40.0% | |
| TTAAATTTAGCACCTGCCCT+GGG | - | chr1.4:2234778-2234797 | None:intergenic | 40.0% | |
| TTCTGTTCTGTAGGGAGATT+TGG | - | chr1.4:2234543-2234562 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr1.4:2232659-2232678 | None:intergenic | 40.0% | |
| ! | AGACCTGGACTCTTTTTATC+AGG | + | chr1.4:2230754-2230773 | MS.gene59231:intron | 40.0% |
| ! | AGCTTTGTGATGACTCCAAA+AGG | - | chr1.4:2231301-2231320 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr1.4:2232521-2232540 | MS.gene59231:intron | 40.0% |
| ! | TGTAAAGCACTAACTGCAGA+AGG | - | chr1.4:2231498-2231517 | None:intergenic | 40.0% |
| ! | TGTCGATTGCTTACAAAAGC+AGG | + | chr1.4:2231822-2231841 | MS.gene59231:intron | 40.0% |
| ! | TTTTTCTCCTCATGGATCTG+TGG | + | chr1.4:2232137-2232156 | MS.gene59231:intron | 40.0% |
| !! | AGCTAAGAGTACCTTATGCT+TGG | - | chr1.4:2231540-2231559 | None:intergenic | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr1.4:2232864-2232883 | None:intergenic | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | - | chr1.4:2233535-2233554 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr1.4:2233134-2233153 | MS.gene59231:intron | 45.0% | |
| ACTGGCTGTACACTTTCTGA+AGG | + | chr1.4:2235647-2235666 | MS.gene59231:CDS | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1.4:2233378-2233397 | MS.gene59231:intron | 45.0% | |
| AGATGGTTTCCAAGCTGAAC+TGG | + | chr1.4:2235629-2235648 | MS.gene59231:CDS | 45.0% | |
| AGGTAGCATGCTTGCATACA+AGG | - | chr1.4:2236678-2236697 | None:intergenic | 45.0% | |
| AGTGAAAGGACAGCACATCT+AGG | - | chr1.4:2231108-2231127 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr1.4:2233025-2233044 | MS.gene59231:intron | 45.0% | |
| ATCTTCTCCACAGATCCATG+AGG | - | chr1.4:2232147-2232166 | None:intergenic | 45.0% | |
| ATGTATGGTGTTCAGGGTTC+TGG | + | chr1.4:2234751-2234770 | MS.gene59231:CDS | 45.0% | |
| CAGAAGGAACGTCTTGCATT+TGG | - | chr1.4:2231482-2231501 | None:intergenic | 45.0% | |
| CAGTGTCCAAGTACTAATGG+TGG | - | chr1.4:2232350-2232369 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr1.4:2233264-2233283 | MS.gene59231:intron | 45.0% | |
| CGAACATGAATGACCTTGGA+AGG | - | chr1.4:2230555-2230574 | None:intergenic | 45.0% | |
| CGACATTGACACATTGACAC+CGG | - | chr1.4:2230993-2231012 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1.4:2233183-2233202 | MS.gene59231:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1.4:2233180-2233199 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr1.4:2233067-2233086 | None:intergenic | 45.0% | |
| CTTCTAATCAAAGCCGTGTC+TGG | + | chr1.4:2230911-2230930 | MS.gene59231:intron | 45.0% | |
| GACCAAGAGGGTGAATGAAA+AGG | + | chr1.4:2230729-2230748 | MS.gene59231:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1.4:2233388-2233407 | MS.gene59231:intron | 45.0% | |
| GGAACTTGACATTGACCAAG+AGG | + | chr1.4:2230716-2230735 | MS.gene59231:intron | 45.0% | |
| GGTAGCATGCTTGCATACAA+GGG | - | chr1.4:2236677-2236696 | None:intergenic | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | + | chr1.4:2233329-2233348 | MS.gene59231:intron | 45.0% | |
| GTGAATGAAAAGGGTAGACC+TGG | + | chr1.4:2230739-2230758 | MS.gene59231:intron | 45.0% | |
| GTGACATTTCAGAAGTCAGC+TGG | + | chr1.4:2232168-2232187 | MS.gene59231:intron | 45.0% | |
| GTTAAATTTAGCACCTGCCC+TGG | - | chr1.4:2234779-2234798 | None:intergenic | 45.0% | |
| GTTTGCCTCCTGGAATAACT+GGG | + | chr1.4:2235381-2235400 | MS.gene59231:CDS | 45.0% | |
| TACTCGAGCCATTCAGTGAA+AGG | - | chr1.4:2231122-2231141 | None:intergenic | 45.0% | |
| TACTGCAAGAACTGCACTTC+AGG | + | chr1.4:2234070-2234089 | MS.gene59231:CDS | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr1.4:2233138-2233157 | None:intergenic | 45.0% | |
| TCTGGGTTTGATAGGGAAAG+GGG | + | chr1.4:2235140-2235159 | MS.gene59231:intron | 45.0% | |
| TCTTCATGTCAGTGCTTCGT+TGG | + | chr1.4:2231064-2231083 | MS.gene59231:intron | 45.0% | |
| TGAAGTCTCTGTGAAAGACG+AGG | - | chr1.4:2234515-2234534 | None:intergenic | 45.0% | |
| TGAGATTGTGACCCTTCTAG+AGG | + | chr1.4:2236558-2236577 | MS.gene59231:CDS | 45.0% | |
| TGTGCTGTCCTTTCACTGAA+TGG | + | chr1.4:2231111-2231130 | MS.gene59231:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr1.4:2233142-2233161 | MS.gene59231:intron | 45.0% | |
| TTATGATGGTTGCTGTCAGC+TGG | + | chr1.4:2234197-2234216 | MS.gene59231:CDS | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr1.4:2233034-2233053 | MS.gene59231:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr1.4:2233048-2233067 | MS.gene59231:intron | 45.0% | |
| TTTGTCCCAGTTATTCCAGG+AGG | - | chr1.4:2235389-2235408 | None:intergenic | 45.0% | |
| ! | ACCCTTTTCATTCACCCTCT+TGG | - | chr1.4:2230734-2230753 | None:intergenic | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr1.4:2232531-2232550 | MS.gene59231:intron | 45.0% |
| ! | AGAGTACCTTATGCTTGGCT+GGG | - | chr1.4:2231535-2231554 | None:intergenic | 45.0% |
| ! | AGGAAGCATGTATGGTGTTC+AGG | + | chr1.4:2234744-2234763 | MS.gene59231:CDS | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr1.4:2232769-2232788 | MS.gene59231:intron | 45.0% |
| ! | GGAAGCATGTATGGTGTTCA+GGG | + | chr1.4:2234745-2234764 | MS.gene59231:CDS | 45.0% |
| ! | GTGGTGTCAATTGGTTCATG+TGG | + | chr1.4:2233646-2233665 | MS.gene59231:intron | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr1.4:2233143-2233162 | MS.gene59231:intron | 45.0% |
| ! | TCAGTTTGAGACTGAGGATC+AGG | + | chr1.4:2236642-2236661 | MS.gene59231:CDS | 45.0% |
| !! | AAGAGTACCTTATGCTTGGC+TGG | - | chr1.4:2231536-2231555 | None:intergenic | 45.0% |
| !! | CAAGTACTAATGGTGGGTGT+GGG | - | chr1.4:2232343-2232362 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr1.4:2232741-2232760 | None:intergenic | 45.0% |
| !! | TGAGAATCAGGGAAGTACCT+CGG | - | chr1.4:2230598-2230617 | None:intergenic | 45.0% |
| !! | TTGTATGGTACGGAGTGTTG+GGG | + | chr1.4:2233144-2233163 | MS.gene59231:intron | 45.0% |
| !! | AATAAATAAATAAAATGAAA+TGG | - | chr1.4:2231408-2231427 | None:intergenic | 5.0% |
| !!! | AATTTCTTAATTTATTTTAT+TGG | + | chr1.4:2235992-2236011 | MS.gene59231:intron | 5.0% |
| !!! | ATAAATTATTTTCTTAATTT+TGG | + | chr1.4:2235793-2235812 | MS.gene59231:intron | 5.0% |
| AAGCATGCTACCTCGCTTTC+TGG | + | chr1.4:2236685-2236704 | MS.gene59231:CDS | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | - | chr1.4:2232594-2232613 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr1.4:2232678-2232697 | None:intergenic | 50.0% | |
| AAGTCAAGGACGAGGAGATG+AGG | + | chr1.4:2231750-2231769 | MS.gene59231:CDS | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr1.4:2233534-2233553 | None:intergenic | 50.0% | |
| ACTGTAGATGCCCAATGCTG+CGG | + | chr1.4:2235334-2235353 | MS.gene59231:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr1.4:2233211-2233230 | MS.gene59231:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr1.4:2232794-2232813 | MS.gene59231:intron | 50.0% | |
| AGTGATGTCTTGTGGGAGTG+TGG | - | chr1.4:2236533-2236552 | None:intergenic | 50.0% | |
| AGTGTACAGCCAGTTCAGCT+TGG | - | chr1.4:2235641-2235660 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr1.4:2233536-2233555 | None:intergenic | 50.0% | |
| CCACACCCACCATTAGTACT+TGG | + | chr1.4:2232341-2232360 | MS.gene59231:intron | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr1.4:2232858-2232877 | MS.gene59231:intron | 50.0% | |
| CCTCAGTCTCAAACTGAACC+AGG | - | chr1.4:2236639-2236658 | None:intergenic | 50.0% | |
| CGTGCTCTATCCCATAACAG+TGG | + | chr1.4:2232097-2232116 | MS.gene59231:CDS | 50.0% | |
| CTCAATGCTGTCCTGCTGTT+TGG | + | chr1.4:2232024-2232043 | MS.gene59231:intron | 50.0% | |
| CTGGAAGGAGGGGGAAAAAA+CGG | - | chr1.4:2234862-2234881 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.4:2233530-2233549 | None:intergenic | 50.0% | |
| CTTGGAAACCATCTCCCATC+TGG | - | chr1.4:2235623-2235642 | None:intergenic | 50.0% | |
| GAAACACCCAGCCAAGCATA+AGG | + | chr1.4:2231526-2231545 | MS.gene59231:CDS | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr1.4:2232543-2232562 | MS.gene59231:intron | 50.0% | |
| GAATGGGAAGAAACAAGGCC+TGG | + | chr1.4:2236618-2236637 | MS.gene59231:CDS | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr1.4:2232909-2232928 | MS.gene59231:intron | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr1.4:2232793-2232812 | MS.gene59231:intron | 50.0% | |
| GCACTTATCCAGATGGGAGA+TGG | + | chr1.4:2235612-2235631 | MS.gene59231:CDS | 50.0% | |
| GCCTGCCTTTCTGTTCTGTA+GGG | - | chr1.4:2234551-2234570 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr1.4:2232542-2232561 | MS.gene59231:intron | 50.0% | |
| GGTTTGCCTCCTGGAATAAC+TGG | + | chr1.4:2235380-2235399 | MS.gene59231:CDS | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr1.4:2233129-2233148 | MS.gene59231:intron | 50.0% | |
| GTCCATGCCAGTGCTTTGTA+GGG | + | chr1.4:2231021-2231040 | MS.gene59231:intron | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr1.4:2232809-2232828 | MS.gene59231:intron | 50.0% | |
| TCCATGCCAGTGCTTTGTAG+GGG | + | chr1.4:2231022-2231041 | MS.gene59231:intron | 50.0% | |
| TCCCTACAGAACAGAAAGGC+AGG | + | chr1.4:2234547-2234566 | MS.gene59231:CDS | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1.4:2233356-2233375 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr1.4:2232541-2232560 | MS.gene59231:intron | 50.0% | |
| TGGATATCCGACTGGAAGGA+GGG | - | chr1.4:2234873-2234892 | None:intergenic | 50.0% | |
| TGGTTCCATGCTCCTCTAGA+AGG | - | chr1.4:2236573-2236592 | None:intergenic | 50.0% | |
| TGTCCATGCCAGTGCTTTGT+AGG | + | chr1.4:2231020-2231039 | MS.gene59231:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1.4:2233191-2233210 | MS.gene59231:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr1.4:2232832-2232851 | MS.gene59231:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr1.4:2232780-2232799 | MS.gene59231:intron | 50.0% |
| ! | CAGCTTGGATATGGTGATGC+AGG | + | chr1.4:2234724-2234743 | MS.gene59231:intron | 50.0% |
| ! | CCTGGTTCAGTTTGAGACTG+AGG | + | chr1.4:2236636-2236655 | MS.gene59231:CDS | 50.0% |
| ! | GGTGATGCAGGAAGCATGTA+TGG | + | chr1.4:2234736-2234755 | MS.gene59231:CDS | 50.0% |
| ! | GGTTCCATGCTCCTCTAGAA+GGG | - | chr1.4:2236572-2236591 | None:intergenic | 50.0% |
| ! | GTAATCACGTGTGTCGGTGT+CGG | - | chr1.4:2230940-2230959 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr1.4:2232779-2232798 | MS.gene59231:intron | 50.0% |
| ! | TTTTTCCCCCTCCTTCCAGT+CGG | + | chr1.4:2234863-2234882 | MS.gene59231:intron | 50.0% |
| !! | CCAAGTACTAATGGTGGGTG+TGG | - | chr1.4:2232344-2232363 | None:intergenic | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr1.4:2232861-2232880 | None:intergenic | 50.0% |
| !! | CTGTGTATTGGCTTGGCTTG+TGG | + | chr1.4:2234262-2234281 | MS.gene59231:intron | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.4:2233522-2233541 | None:intergenic | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr1.4:2232616-2232635 | MS.gene59231:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.4:2233521-2233540 | MS.gene59231:intron | 55.0% | |
| CAAGGACGAGGAGATGAGGT+TGG | + | chr1.4:2231754-2231773 | MS.gene59231:intron | 55.0% | |
| CACACACCCCTACAAAGCAC+TGG | - | chr1.4:2231031-2231050 | None:intergenic | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr1.4:2232551-2232570 | None:intergenic | 55.0% | |
| CCTGTGGATATCCGACTGGA+AGG | - | chr1.4:2234877-2234896 | None:intergenic | 55.0% | |
| CCTTCCAGTCGGATATCCAC+AGG | + | chr1.4:2234874-2234893 | MS.gene59231:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.4:2233528-2233547 | MS.gene59231:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr1.4:2233203-2233222 | MS.gene59231:intron | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr1.4:2232617-2232636 | MS.gene59231:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr1.4:2233116-2233135 | MS.gene59231:intron | 55.0% | |
| CTCACCTGTGGATATCCGAC+TGG | - | chr1.4:2234881-2234900 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1.4:2233355-2233374 | None:intergenic | 55.0% | |
| GATATCCGACTGGAAGGAGG+GGG | - | chr1.4:2234871-2234890 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr1.4:2232842-2232861 | None:intergenic | 55.0% | |
| GGATATCCGACTGGAAGGAG+GGG | - | chr1.4:2234872-2234891 | None:intergenic | 55.0% | |
| GGCCTGCCTTTCTGTTCTGT+AGG | - | chr1.4:2234552-2234571 | None:intergenic | 55.0% | |
| GGTTTGGCTGTGCATCCAGA+GGG | - | chr1.4:2232052-2232071 | None:intergenic | 55.0% | |
| GTGGATATCCGACTGGAAGG+AGG | - | chr1.4:2234874-2234893 | None:intergenic | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr1.4:2232618-2232637 | MS.gene59231:intron | 55.0% | |
| TCCAGAGGGTTCCAAACAGC+AGG | - | chr1.4:2232038-2232057 | None:intergenic | 55.0% | |
| TCCCCCAAAAGCAGCTGCAA+TGG | - | chr1.4:2235360-2235379 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr1.4:2232552-2232571 | None:intergenic | 55.0% | |
| TCGTTGGGGAGCAGCAATAG+CGG | - | chr1.4:2236495-2236514 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.4:2233522-2233541 | MS.gene59231:intron | 55.0% | |
| TGTGGGGCACGAAATATCCG+AGG | + | chr1.4:2230578-2230597 | MS.gene59231:CDS | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr1.4:2232612-2232631 | MS.gene59231:intron | 55.0% | |
| ! | GTGACCCTTCTAGAGGAGCA+TGG | + | chr1.4:2236565-2236584 | MS.gene59231:CDS | 55.0% |
| ! | TCCTGCTGTTTGGAACCCTC+TGG | + | chr1.4:2232034-2232053 | MS.gene59231:intron | 55.0% |
| !! | ACCCCTACAAAGCACTGGCA+TGG | - | chr1.4:2231026-2231045 | None:intergenic | 55.0% |
| !! | TGCTACCTCGCTTTCTGGCT+CGG | + | chr1.4:2236690-2236709 | MS.gene59231:CDS | 55.0% |
| !! | TGTTCAGGGTTCTGGACCCA+GGG | + | chr1.4:2234759-2234778 | MS.gene59231:CDS | 55.0% |
| !!! | ATTGCAGCTGCTTTTGGGGG+AGG | + | chr1.4:2235359-2235378 | MS.gene59231:CDS | 55.0% |
| !!! | CGGCCATTGCAGCTGCTTTT+GGG | + | chr1.4:2235354-2235373 | MS.gene59231:CDS | 55.0% |
| !!! | GCCATTGCAGCTGCTTTTGG+GGG | + | chr1.4:2235356-2235375 | MS.gene59231:CDS | 55.0% |
| !!! | GGCCATTGCAGCTGCTTTTG+GGG | + | chr1.4:2235355-2235374 | MS.gene59231:CDS | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr1.4:2232812-2232831 | MS.gene59231:intron | 60.0% | |
| AGCTGCAATGGCCGCAGCAT+TGG | - | chr1.4:2235348-2235367 | None:intergenic | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | + | chr1.4:2232625-2232644 | MS.gene59231:intron | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | + | chr1.4:2232605-2232624 | MS.gene59231:intron | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr1.4:2232548-2232567 | MS.gene59231:intron | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr1.4:2232797-2232816 | MS.gene59231:intron | 60.0% | |
| GAGTGCACGAGCATGGGTGT+GGG | - | chr1.4:2232321-2232340 | None:intergenic | 60.0% | |
| GCTGCAATGGCCGCAGCATT+GGG | - | chr1.4:2235347-2235366 | None:intergenic | 60.0% | |
| TTTGGGGGAGGTTTGCCTCC+TGG | + | chr1.4:2235371-2235390 | MS.gene59231:CDS | 60.0% | |
| ! | CGGTTTGGCTGTGCATCCAG+AGG | - | chr1.4:2232053-2232072 | None:intergenic | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr1.4:2232783-2232802 | MS.gene59231:intron | 60.0% |
| ! | GTGTGGGAGTGCACGAGCAT+GGG | - | chr1.4:2232327-2232346 | None:intergenic | 60.0% |
| !! | GCGGCCATTGCAGCTGCTTT+TGG | + | chr1.4:2235353-2235372 | MS.gene59231:CDS | 60.0% |
| !! | GTGTTCAGGGTTCTGGACCC+AGG | + | chr1.4:2234758-2234777 | MS.gene59231:CDS | 60.0% |
| !! | TCGGTGTCGGACACCAGACA+CGG | - | chr1.4:2230927-2230946 | None:intergenic | 60.0% |
| GGAGTGCACGAGCATGGGTG+TGG | - | chr1.4:2232322-2232341 | None:intergenic | 65.0% | |
| ! | GGTGTGGGAGTGCACGAGCA+TGG | - | chr1.4:2232328-2232347 | None:intergenic | 65.0% |
| GAGAAGGCCCGTAGACGCCG+TGG | + | chr1.4:2233345-2233364 | MS.gene59231:intron | 70.0% | |
| !! | CAGGGTTCTGGACCCAGGGC+AGG | + | chr1.4:2234763-2234782 | MS.gene59231:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 2230543 | 2236711 | 2230543 | ID=MS.gene59231 |
| chr1.4 | mRNA | 2230543 | 2236711 | 2230543 | ID=MS.gene59231.t1;Parent=MS.gene59231 |
| chr1.4 | exon | 2230543 | 2230599 | 2230543 | ID=MS.gene59231.t1.exon1;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2230543 | 2230599 | 2230543 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2231274 | 2231345 | 2231274 | ID=MS.gene59231.t1.exon2;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2231274 | 2231345 | 2231274 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2231471 | 2231547 | 2231471 | ID=MS.gene59231.t1.exon3;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2231471 | 2231547 | 2231471 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2231693 | 2231771 | 2231693 | ID=MS.gene59231.t1.exon4;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2231693 | 2231771 | 2231693 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2232065 | 2232155 | 2232065 | ID=MS.gene59231.t1.exon5;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2232065 | 2232155 | 2232065 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234027 | 2234091 | 2234027 | ID=MS.gene59231.t1.exon6;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234027 | 2234091 | 2234027 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234186 | 2234235 | 2234186 | ID=MS.gene59231.t1.exon7;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234186 | 2234235 | 2234186 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234399 | 2234440 | 2234399 | ID=MS.gene59231.t1.exon8;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234399 | 2234440 | 2234399 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234527 | 2234578 | 2234527 | ID=MS.gene59231.t1.exon9;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234527 | 2234578 | 2234527 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234727 | 2234784 | 2234727 | ID=MS.gene59231.t1.exon10;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234727 | 2234784 | 2234727 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2234882 | 2234895 | 2234882 | ID=MS.gene59231.t1.exon11;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2234882 | 2234895 | 2234882 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2235341 | 2235448 | 2235341 | ID=MS.gene59231.t1.exon12;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2235341 | 2235448 | 2235341 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2235525 | 2235668 | 2235525 | ID=MS.gene59231.t1.exon13;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2235525 | 2235668 | 2235525 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| chr1.4 | exon | 2236361 | 2236711 | 2236361 | ID=MS.gene59231.t1.exon14;Parent=MS.gene59231.t1 |
| chr1.4 | CDS | 2236361 | 2236711 | 2236361 | ID=cds.MS.gene59231.t1;Parent=MS.gene59231.t1 |
| Gene Sequence |
| Protein sequence |
