Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055644.t1 | XP_003592452.2 | 98.3 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 7.10E-255 | 889.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055644.t1 | Q9FNY0 | 55.9 | 474 | 166 | 11 | 16 | 464 | 30 | 485 | 3.6e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055644.t1 | G7IE33 | 98.3 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 5.1e-255 | 889.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055644.t1 | TF | E2F-DP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055644 | MS.gene055646 | 0.849534 | 3.04E-60 | -1.69E-46 |
| MS.gene055644 | MS.gene41081 | 0.841861 | 3.67E-58 | -1.69E-46 |
| MS.gene055644 | MS.gene41083 | 0.813011 | 3.18E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055644.t1 | MTR_1g105110 | 98.276 | 464 | 7 | 1 | 1 | 464 | 1 | 463 | 0.0 | 934 |
| MS.gene055644.t1 | MTR_4g052000 | 59.234 | 444 | 169 | 8 | 25 | 461 | 19 | 457 | 2.03e-174 | 497 |
| MS.gene055644.t1 | MTR_3g113800 | 54.260 | 223 | 99 | 1 | 127 | 349 | 89 | 308 | 5.07e-72 | 232 |
| MS.gene055644.t1 | MTR_3g113800 | 58.000 | 200 | 81 | 1 | 127 | 326 | 89 | 285 | 5.10e-70 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055644.t1 | AT2G36010 | 56.959 | 467 | 159 | 11 | 16 | 458 | 30 | 478 | 1.39e-172 | 493 |
| MS.gene055644.t1 | AT2G36010 | 56.716 | 469 | 159 | 12 | 16 | 458 | 30 | 480 | 1.30e-170 | 489 |
| MS.gene055644.t1 | AT5G22220 | 53.092 | 469 | 179 | 14 | 22 | 461 | 10 | 466 | 1.19e-143 | 419 |
| MS.gene055644.t1 | AT5G22220 | 52.790 | 466 | 182 | 13 | 22 | 461 | 10 | 463 | 5.74e-141 | 412 |
| MS.gene055644.t1 | AT2G36010 | 46.332 | 518 | 165 | 14 | 16 | 458 | 30 | 509 | 2.86e-133 | 394 |
| MS.gene055644.t1 | AT1G47870 | 47.003 | 317 | 118 | 7 | 105 | 420 | 123 | 390 | 2.50e-79 | 252 |
| MS.gene055644.t1 | AT1G47870 | 47.003 | 317 | 118 | 7 | 105 | 420 | 124 | 391 | 2.75e-79 | 252 |
| MS.gene055644.t1 | AT5G14960 | 41.304 | 92 | 49 | 1 | 136 | 227 | 6 | 92 | 1.80e-12 | 68.9 |
| MS.gene055644.t1 | AT3G48160 | 45.205 | 73 | 39 | 1 | 143 | 215 | 34 | 105 | 3.98e-11 | 65.1 |
| MS.gene055644.t1 | AT3G48160 | 45.205 | 73 | 39 | 1 | 143 | 215 | 34 | 105 | 4.11e-11 | 65.1 |
Find 121 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCGCTGCTGTTGATTCT+AGG | 0.183439 | 1.4:-47759239 | MS.gene055644:CDS |
| TGTAGAATGATGCTGATTAT+TGG | 0.219679 | 1.4:-47754672 | MS.gene055644:intron |
| AGGACATGATTTGCCTTCTT+TGG | 0.234385 | 1.4:+47757958 | None:intergenic |
| TTACCTCTTGCTTCAAGTTC+AGG | 0.236533 | 1.4:-47755028 | MS.gene055644:CDS |
| GAGAAATTTGAAGAGATTAA+TGG | 0.237066 | 1.4:-47755070 | MS.gene055644:CDS |
| AATCAAAATCATCTCTGATT+AGG | 0.254900 | 1.4:+47754382 | None:intergenic |
| TGTGACCGAGGAAGATATTA+AGG | 0.256644 | 1.4:-47755643 | MS.gene055644:CDS |
| CAATTGATGTCTACCTTATC+AGG | 0.299411 | 1.4:-47755258 | MS.gene055644:intron |
| ATATGACATAACTAATGTTT+TGG | 0.312982 | 1.4:-47757446 | MS.gene055644:CDS |
| ATCAAAATCATCTCTGATTA+GGG | 0.322568 | 1.4:+47754383 | None:intergenic |
| TATCTTCCTCGGTCACAAAA+AGG | 0.345600 | 1.4:+47755649 | None:intergenic |
| TAAGGGCCTACCTTGCTTCC+AGG | 0.358343 | 1.4:-47755625 | MS.gene055644:intron |
| AAAACTCCTTTGTCTGCAAA+AGG | 0.367786 | 1.4:-47758007 | MS.gene055644:CDS |
| TGGTGATATCTCTTTGCTTA+AGG | 0.368188 | 1.4:-47757224 | MS.gene055644:intron |
| GAAGCAAGAGGTAAGCTTGC+GGG | 0.386616 | 1.4:+47755037 | None:intergenic |
| CTGATAAGGTAGACATCAAT+TGG | 0.387115 | 1.4:+47755259 | None:intergenic |
| TTCATTACATTAGTGTATCC+AGG | 0.390006 | 1.4:+47758040 | None:intergenic |
| ATATCAAGAACAGAATATAT+TGG | 0.392044 | 1.4:-47757399 | MS.gene055644:CDS |
| CCAGCAGGAGTGAGCGGAGA+AGG | 0.392492 | 1.4:+47757803 | None:intergenic |
| CCTCAGCACGCTTGAGCAAA+TGG | 0.395797 | 1.4:+47757617 | None:intergenic |
| TTCCCTAAACTTACTTCCTC+AGG | 0.398706 | 1.4:+47755418 | None:intergenic |
| TACCTCTTGCTTCAAGTTCA+GGG | 0.401939 | 1.4:-47755027 | MS.gene055644:CDS |
| GTCGGAAGGTCCAGCGTTAC+CGG | 0.403176 | 1.4:+47759368 | None:intergenic |
| AATGTTTCACAAGAGTTTGC+TGG | 0.409766 | 1.4:-47754905 | MS.gene055644:CDS |
| TTCTGACCAGCATTTGAGAT+AGG | 0.420653 | 1.4:+47757929 | None:intergenic |
| GGAAGTTGACAACCTTTCTC+TGG | 0.430841 | 1.4:-47755947 | MS.gene055644:CDS |
| TAAAGCAGCAGAAACTTTGC+AGG | 0.430868 | 1.4:-47757575 | MS.gene055644:intron |
| AAACTCCTTTGTCTGCAAAA+GGG | 0.431635 | 1.4:-47758006 | MS.gene055644:CDS |
| ATCTGTGCTCCGGTCGGCAT+CGG | 0.435761 | 1.4:+47759336 | None:intergenic |
| GGAGATATAGAATCATTCTA+AGG | 0.456891 | 1.4:-47755294 | MS.gene055644:CDS |
| CTCGAGAGCATTTCAAAGTC+AGG | 0.458107 | 1.4:+47754457 | None:intergenic |
| TGTCGTTATGACAGTTCCTT+AGG | 0.460009 | 1.4:-47757776 | MS.gene055644:intron |
| TCCTTTCCACTGCATTCAGC+AGG | 0.460324 | 1.4:+47754974 | None:intergenic |
| GTGACCGAGGAAGATATTAA+GGG | 0.460410 | 1.4:-47755642 | MS.gene055644:CDS |
| GCATAACAGCTAATGTTGAT+TGG | 0.461803 | 1.4:-47754501 | MS.gene055644:intron |
| CCTTCTCCGCTCACTCCTGC+TGG | 0.469787 | 1.4:-47757803 | MS.gene055644:CDS |
| GCAAGTAGTTATACCTGATA+AGG | 0.470864 | 1.4:+47755245 | None:intergenic |
| ATGTTTCACAAGAGTTTGCT+GGG | 0.474909 | 1.4:-47754904 | MS.gene055644:CDS |
| TGCCGACCGGAGCACAGATT+CGG | 0.476300 | 1.4:-47759332 | MS.gene055644:CDS |
| ATCATTCTAAGGAGCACAAT+GGG | 0.480097 | 1.4:-47755283 | MS.gene055644:CDS |
| GGGGAAGGGCAAACAAGTCA+AGG | 0.482335 | 1.4:-47757985 | MS.gene055644:CDS |
| AAACTTACTTCCTCAGGATC+AGG | 0.482688 | 1.4:+47755424 | None:intergenic |
| TACTCATCAGTCGGTGCAAA+CGG | 0.485816 | 1.4:+47759267 | None:intergenic |
| TGAGCAACAAGTGACAGAAA+TGG | 0.489280 | 1.4:-47754999 | MS.gene055644:CDS |
| GTCTCTGCTCTTCCAGAGAA+AGG | 0.490737 | 1.4:+47755935 | None:intergenic |
| TATTGGCTTCTATCAGATGC+TGG | 0.491589 | 1.4:-47754655 | MS.gene055644:CDS |
| AGTCCCGGCGATGGAGTTTG+TGG | 0.503718 | 1.4:+47754433 | None:intergenic |
| AGCCGTTATTGTTAGATCTC+CGG | 0.504106 | 1.4:-47759193 | MS.gene055644:intron |
| CCAGCATTTGAGATAGGTGT+TGG | 0.506282 | 1.4:+47757935 | None:intergenic |
| AACTCCTTTGTCTGCAAAAG+GGG | 0.506592 | 1.4:-47758005 | MS.gene055644:CDS |
| GGAATTGAATCTTCTACGCC+TGG | 0.513959 | 1.4:-47757256 | MS.gene055644:CDS |
| AAGGTCATAAAGCGGAAGAA+TGG | 0.515250 | 1.4:-47758106 | MS.gene055644:CDS |
| AACTCCATCGCCGGGACTTG+CGG | 0.515372 | 1.4:-47754428 | MS.gene055644:CDS |
| CAGCAGGAGTGAGCGGAGAA+GGG | 0.521252 | 1.4:+47757804 | None:intergenic |
| TGAGAAGAGAGCAGAGCTTG+AGG | 0.521585 | 1.4:+47754944 | None:intergenic |
| CGTGGCTCGCCGATGCCGAC+CGG | 0.525876 | 1.4:-47759345 | MS.gene055644:CDS |
| GGCCGAATCTGTGCTCCGGT+CGG | 0.529279 | 1.4:+47759330 | None:intergenic |
| CGGCATCGGCGAGCCACGGT+CGG | 0.533060 | 1.4:+47759350 | None:intergenic |
| GATGGTGCTTCCGCAAGTCC+CGG | 0.535364 | 1.4:+47754418 | None:intergenic |
| AGGCCACAAACTCCATCGCC+GGG | 0.535755 | 1.4:-47754436 | MS.gene055644:CDS |
| AAGTCAAGGGCATCCAAAGA+AGG | 0.536537 | 1.4:-47757971 | MS.gene055644:CDS |
| GCTTCCGCAAGTCCCGGCGA+TGG | 0.539022 | 1.4:+47754424 | None:intergenic |
| CGGTCGGCATCGGCGAGCCA+CGG | 0.539391 | 1.4:+47759346 | None:intergenic |
| CACCGGAGATCTAACAATAA+CGG | 0.545488 | 1.4:+47759191 | None:intergenic |
| ATCGGCGAGCCACGGTCGGA+AGG | 0.546657 | 1.4:+47759354 | None:intergenic |
| CTATACTATAGGTGCAAAAG+AGG | 0.547054 | 1.4:-47757474 | MS.gene055644:intron |
| GAGGCCACAAACTCCATCGC+CGG | 0.547101 | 1.4:-47754437 | MS.gene055644:CDS |
| AAGCAAGAGGTAAGCTTGCG+GGG | 0.551818 | 1.4:+47755038 | None:intergenic |
| AGCAGGAGTGAGCGGAGAAG+GGG | 0.552395 | 1.4:+47757805 | None:intergenic |
| TTGCTCAAGCGTGCTGAGGA+TGG | 0.554722 | 1.4:-47757613 | MS.gene055644:CDS |
| CAAAAGTCAAGTAACAGCCC+TGG | 0.555813 | 1.4:-47758058 | MS.gene055644:CDS |
| ATCTTCTACGCCTGGTAATG+TGG | 0.558876 | 1.4:-47757248 | MS.gene055644:CDS |
| AGAGACTAGATGATCAGATA+AGG | 0.559999 | 1.4:-47755918 | MS.gene055644:intron |
| CGGCGGCCGAATCTGTGCTC+CGG | 0.564361 | 1.4:+47759326 | None:intergenic |
| TCATAACGACAGCTACCAGC+AGG | 0.570121 | 1.4:+47757788 | None:intergenic |
| TAGGCCCTTAATATCTTCCT+CGG | 0.571156 | 1.4:+47755638 | None:intergenic |
| CCAACACCTATCTCAAATGC+TGG | 0.572738 | 1.4:-47757935 | MS.gene055644:intron |
| GACCCTGAACTTGAAGCAAG+AGG | 0.573741 | 1.4:+47755025 | None:intergenic |
| GCATTTGAGATAGGTGTTGG+AGG | 0.574157 | 1.4:+47757938 | None:intergenic |
| TCATTACATTAGTGTATCCA+GGG | 0.578943 | 1.4:+47758041 | None:intergenic |
| ACAGCTAATGTTGATTGGAG+TGG | 0.580563 | 1.4:-47754496 | MS.gene055644:intron |
| GAGTTAGCATAACAGATATG+TGG | 0.583522 | 1.4:-47754633 | MS.gene055644:CDS |
| AAAGAACTCACCTGGAAGCA+AGG | 0.584852 | 1.4:+47755615 | None:intergenic |
| ATATCACCATCCACATTACC+AGG | 0.586810 | 1.4:+47757238 | None:intergenic |
| ATACTTACATCAGCATCTGA+AGG | 0.592246 | 1.4:+47754863 | None:intergenic |
| TACTATAGGTGCAAAAGAGG+AGG | 0.592536 | 1.4:-47757471 | MS.gene055644:intron |
| AAAGTATGATACTCATCAGT+CGG | 0.596002 | 1.4:+47759258 | None:intergenic |
| AACGCTGGACCTTCCGACCG+TGG | 0.596010 | 1.4:-47759363 | MS.gene055644:CDS |
| AACGCAAGATGACGCTTCAA+CGG | 0.597488 | 1.4:+47759306 | None:intergenic |
| AACGGCTTCATTGACATGAT+CGG | 0.597493 | 1.4:+47759209 | None:intergenic |
| CAGCTACCAGCAGGAGTGAG+CGG | 0.598273 | 1.4:+47757797 | None:intergenic |
| CTCAGGATCAGGAACTTCCA+AGG | 0.601233 | 1.4:+47755435 | None:intergenic |
| TCTACGCCTGGTAATGTGGA+TGG | 0.603037 | 1.4:-47757244 | MS.gene055644:CDS |
| TCCGCCGTAACCGTAATGTC+CGG | 0.603732 | 1.4:-47759387 | None:intergenic |
| CTTGGAAGTTCCTGATCCTG+AGG | 0.604439 | 1.4:-47755434 | MS.gene055644:CDS |
| AGCTCCGCATGGAACCACCT+TGG | 0.605657 | 1.4:-47755452 | MS.gene055644:CDS |
| AATGGAATGAATGAAAGTGA+AGG | 0.612614 | 1.4:-47758088 | MS.gene055644:CDS |
| CTGACTTTGAAATGCTCTCG+AGG | 0.615106 | 1.4:-47754456 | MS.gene055644:CDS |
| AACTCACCTGGAAGCAAGGT+AGG | 0.616174 | 1.4:+47755619 | None:intergenic |
| GCAAGATGACGCTTCAACGG+CGG | 0.616413 | 1.4:+47759309 | None:intergenic |
| TACTTACATCAGCATCTGAA+GGG | 0.619198 | 1.4:+47754864 | None:intergenic |
| TCTCCGCTGTAGTTCGTCAA+CGG | 0.627564 | 1.4:+47755312 | None:intergenic |
| CCATTTGCTCAAGCGTGCTG+AGG | 0.631281 | 1.4:-47757617 | MS.gene055644:CDS |
| ATAGCAATCAAAGCTCCGCA+TGG | 0.631816 | 1.4:-47755463 | MS.gene055644:CDS |
| AATCATTCTAAGGAGCACAA+TGG | 0.638536 | 1.4:-47755284 | MS.gene055644:CDS |
| AGCAAGAGGTAAGCTTGCGG+GGG | 0.640114 | 1.4:+47755039 | None:intergenic |
| GTTTCACAAGAGTTTGCTGG+GGG | 0.641606 | 1.4:-47754902 | MS.gene055644:CDS |
| ACTCCTTTGTCTGCAAAAGG+GGG | 0.643497 | 1.4:-47758004 | MS.gene055644:CDS |
| ACCTGCTGAATGCAGTGGAA+AGG | 0.654494 | 1.4:-47754975 | MS.gene055644:CDS |
| GCAAGAGGTAAGCTTGCGGG+GGG | 0.656380 | 1.4:+47755040 | None:intergenic |
| GGGAAGGGCAAACAAGTCAA+GGG | 0.657296 | 1.4:-47757984 | MS.gene055644:CDS |
| TGAAGCAAGAGGTAAGCTTG+CGG | 0.662777 | 1.4:+47755036 | None:intergenic |
| ATGGTACCTGCTGAATGCAG+TGG | 0.669987 | 1.4:-47754980 | MS.gene055644:CDS |
| TTAGGGTTAGCTACAGTCGA+TGG | 0.674010 | 1.4:+47754400 | None:intergenic |
| TCATCAGTCGGTGCAAACGG+TGG | 0.676716 | 1.4:+47759270 | None:intergenic |
| AGGCCGTTGACGAACTACAG+CGG | 0.677542 | 1.4:-47755315 | MS.gene055644:CDS |
| TGTTTCACAAGAGTTTGCTG+GGG | 0.692916 | 1.4:-47754903 | MS.gene055644:CDS |
| TAATGTTGATTGGAGTGGAG+TGG | 0.694763 | 1.4:-47754491 | MS.gene055644:CDS |
| ACTTCCAAGGTGGTTCCATG+CGG | 0.714996 | 1.4:+47755448 | None:intergenic |
| GGTGGTGTAAGGTCATAAAG+CGG | 0.723032 | 1.4:-47758114 | MS.gene055644:intron |
| AGGATCAGGAACTTCCAAGG+TGG | 0.735853 | 1.4:+47755438 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTTTTTAAATTATTAC+CGG | - | chr1.4:47755213-47755232 | MS.gene055644:intron | 10.0% |
| !!! | TAGAAAAAATGTATATATTT+TGG | + | chr1.4:47756417-47756436 | None:intergenic | 10.0% |
| !!! | TTTTTTTAGTATTTAATGAT+TGG | - | chr1.4:47759030-47759049 | MS.gene055644:intron | 10.0% |
| !!! | AAAATCTTTTGTATAGAATA+CGG | + | chr1.4:47756214-47756233 | None:intergenic | 15.0% |
| !! | AAATGAATCTAAGAACTAAA+TGG | + | chr1.4:47758011-47758030 | None:intergenic | 20.0% |
| !! | AAGTCATTCTAATTAATTTC+TGG | + | chr1.4:47757677-47757696 | None:intergenic | 20.0% |
| !! | AATGAATCTAAGAACTAAAT+GGG | + | chr1.4:47758010-47758029 | None:intergenic | 20.0% |
| !! | AATTAATTAGAATGACTTAG+TGG | - | chr1.4:47757679-47757698 | MS.gene055644:intron | 20.0% |
| !! | AGAAAAAGTAACAGATATAT+TGG | + | chr1.4:47756239-47756258 | None:intergenic | 20.0% |
| !! | ATATCAAGAACAGAATATAT+TGG | - | chr1.4:47756363-47756382 | MS.gene055644:intron | 20.0% |
| !! | CAACTTGGTTTAATTAAAAT+TGG | - | chr1.4:47754893-47754912 | MS.gene055644:CDS | 20.0% |
| !! | TAGATAAATGGAAAGTTAAT+CGG | + | chr1.4:47755865-47755884 | None:intergenic | 20.0% |
| !! | TCAAAAATTCCAAAATTAAC+TGG | + | chr1.4:47758651-47758670 | None:intergenic | 20.0% |
| !! | TTAAAATTATTTCCTAACAC+TGG | - | chr1.4:47754861-47754880 | MS.gene055644:intron | 20.0% |
| !! | TTGGTTTAATTAAAATTGGA+GGG | - | chr1.4:47754897-47754916 | MS.gene055644:CDS | 20.0% |
| !! | TTTAAATTCTCCTATACTAT+AGG | - | chr1.4:47756277-47756296 | MS.gene055644:intron | 20.0% |
| !!! | AACAATGTTGATAATACAAA+TGG | + | chr1.4:47758199-47758218 | None:intergenic | 20.0% |
| !!! | AGAAAAGCATTAAAACAAAA+AGG | + | chr1.4:47759169-47759188 | None:intergenic | 20.0% |
| !!! | ATATGACATAACTAATGTTT+TGG | - | chr1.4:47756316-47756335 | MS.gene055644:intron | 20.0% |
| !!! | TTATTTTTTGTGGAAATAGT+TGG | - | chr1.4:47754725-47754744 | MS.gene055644:intron | 20.0% |
| !!! | TTGTTTTCTCATATTGATAA+GGG | - | chr1.4:47756819-47756838 | MS.gene055644:intron | 20.0% |
| !!! | TTTGTATTGATTAAACACTT+CGG | - | chr1.4:47758990-47759009 | MS.gene055644:intron | 20.0% |
| ! | AATACTAAAAAAACAACTGC+AGG | + | chr1.4:47759023-47759042 | None:intergenic | 25.0% |
| ! | AATATGTTGTGATAAGGATA+AGG | - | chr1.4:47757485-47757504 | MS.gene055644:intron | 25.0% |
| ! | ACCTAAAAGGAATTGAAAAT+TGG | + | chr1.4:47758092-47758111 | None:intergenic | 25.0% |
| ! | AGATAAATGGAAAGTTAATC+GGG | + | chr1.4:47755864-47755883 | None:intergenic | 25.0% |
| ! | AGGAGAATTTAAATTCATGT+AGG | + | chr1.4:47756270-47756289 | None:intergenic | 25.0% |
| ! | ATTGTATAACAATTAGTTCC+AGG | + | chr1.4:47756603-47756622 | None:intergenic | 25.0% |
| ! | CTTATTGTTTATGAACATGT+TGG | - | chr1.4:47755627-47755646 | MS.gene055644:CDS | 25.0% |
| ! | CTTGGTTTAATTAAAATTGG+AGG | - | chr1.4:47754896-47754915 | MS.gene055644:CDS | 25.0% |
| ! | GAGAAATTTGAAGAGATTAA+TGG | - | chr1.4:47758692-47758711 | MS.gene055644:intron | 25.0% |
| ! | TACACTAATACATATCTAGA+AGG | + | chr1.4:47756054-47756073 | None:intergenic | 25.0% |
| ! | TGATAGCATCAATATAAACA+TGG | + | chr1.4:47756726-47756745 | None:intergenic | 25.0% |
| ! | TGATGCTATCAATATTGAAA+AGG | - | chr1.4:47756735-47756754 | MS.gene055644:intron | 25.0% |
| ! | TTGAACATAACGTAGATAAA+TGG | + | chr1.4:47755877-47755896 | None:intergenic | 25.0% |
| !! | AATAACAATACTTTTCCTTC+TGG | + | chr1.4:47758050-47758069 | None:intergenic | 25.0% |
| !! | AATTGTGTCGAAAACATTTT+CGG | - | chr1.4:47754966-47754985 | MS.gene055644:CDS | 25.0% |
| !! | ACCAATTTTCAATTCCTTTT+AGG | - | chr1.4:47758088-47758107 | MS.gene055644:CDS | 25.0% |
| !! | CTTTTGAACCATTATTAACA+GGG | - | chr1.4:47757928-47757947 | MS.gene055644:intron | 25.0% |
| !! | TAGATATTTGAAACTGAGTT+TGG | - | chr1.4:47757551-47757570 | MS.gene055644:intron | 25.0% |
| !! | TATGTATATCAAGTTGTTAG+AGG | - | chr1.4:47757603-47757622 | MS.gene055644:CDS | 25.0% |
| !! | TGAAAAGGATTAGTAATGAA+AGG | - | chr1.4:47756750-47756769 | MS.gene055644:intron | 25.0% |
| !! | TGTATGATTAATTGCTACTT+TGG | - | chr1.4:47755518-47755537 | MS.gene055644:intron | 25.0% |
| !! | TTATGAACTCTTTTCATTTG+TGG | - | chr1.4:47755422-47755441 | MS.gene055644:intron | 25.0% |
| !!! | GTTGATAATACAAATGGAAA+AGG | + | chr1.4:47758193-47758212 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCTCATATTGATA+AGG | - | chr1.4:47756818-47756837 | MS.gene055644:intron | 25.0% |
| !!! | GTTTTACATGCTTTTGATTT+TGG | - | chr1.4:47754754-47754773 | MS.gene055644:intron | 25.0% |
| !!! | TGCTTTTGATTTTGGTTTAT+CGG | - | chr1.4:47754762-47754781 | MS.gene055644:intron | 25.0% |
| !!! | TTGTTTTTGCATGTTGATAA+GGG | - | chr1.4:47757528-47757547 | MS.gene055644:intron | 25.0% |
| !!! | TTTGTTTTTGCATGTTGATA+AGG | - | chr1.4:47757527-47757546 | MS.gene055644:intron | 25.0% |
| AAAGGATAGTATCAATCTCT+TGG | - | chr1.4:47756768-47756787 | MS.gene055644:intron | 30.0% | |
| AAAGTATGATACTCATCAGT+CGG | + | chr1.4:47754507-47754526 | None:intergenic | 30.0% | |
| AACATTCTCCTCTAACATAT+GGG | + | chr1.4:47757324-47757343 | None:intergenic | 30.0% | |
| AACTTATACAAGAACTTCAC+AGG | - | chr1.4:47756101-47756120 | MS.gene055644:intron | 30.0% | |
| AATCTCAATAACAGCATGAA+AGG | + | chr1.4:47758229-47758248 | None:intergenic | 30.0% | |
| AATGGAATGAATGAAAGTGA+AGG | - | chr1.4:47755674-47755693 | MS.gene055644:intron | 30.0% | |
| AATTCTTACATCAAACCTTG+TGG | - | chr1.4:47756475-47756494 | MS.gene055644:intron | 30.0% | |
| ACACACACACATCAATATAT+CGG | + | chr1.4:47755577-47755596 | None:intergenic | 30.0% | |
| ACATCAATATATCGGTGAAA+TGG | + | chr1.4:47755569-47755588 | None:intergenic | 30.0% | |
| ACTAAATGGGAAATTACTTC+TGG | + | chr1.4:47757997-47758016 | None:intergenic | 30.0% | |
| AGTATCAATCTCTTGGAATA+AGG | - | chr1.4:47756775-47756794 | MS.gene055644:intron | 30.0% | |
| AGTGTCAATATGTTGTGATA+AGG | - | chr1.4:47757479-47757498 | MS.gene055644:intron | 30.0% | |
| AGTTCATTAAGTCTAATGCT+TGG | - | chr1.4:47755096-47755115 | MS.gene055644:intron | 30.0% | |
| ATACATATCTAGAAGGTGAA+TGG | + | chr1.4:47756047-47756066 | None:intergenic | 30.0% | |
| ATTGCTTCCAAAATTACCTA+AGG | + | chr1.4:47756005-47756024 | None:intergenic | 30.0% | |
| ATTGTTTATGAACATGTTGG+TGG | - | chr1.4:47755630-47755649 | MS.gene055644:CDS | 30.0% | |
| CAGCAAATAGACATTATAGT+TGG | + | chr1.4:47756663-47756682 | None:intergenic | 30.0% | |
| CTCTTCAAATTGACTGAAAA+CGG | + | chr1.4:47758675-47758694 | None:intergenic | 30.0% | |
| GATGATCAGATAAGGTTATA+TGG | - | chr1.4:47757852-47757871 | MS.gene055644:intron | 30.0% | |
| GGAGATATAGAATCATTCTA+AGG | - | chr1.4:47758468-47758487 | MS.gene055644:intron | 30.0% | |
| GTATCAATCTCTTGGAATAA+GGG | - | chr1.4:47756776-47756795 | MS.gene055644:intron | 30.0% | |
| TACATATCTAGAAGGTGAAT+GGG | + | chr1.4:47756046-47756065 | None:intergenic | 30.0% | |
| TATAGTTTCTTATGGCATGT+AGG | - | chr1.4:47755932-47755951 | MS.gene055644:CDS | 30.0% | |
| TCATTACATTAGTGTATCCA+GGG | + | chr1.4:47755724-47755743 | None:intergenic | 30.0% | |
| TGAATGTTGTAACTCAAACT+AGG | - | chr1.4:47757355-47757374 | MS.gene055644:intron | 30.0% | |
| TGATTATGTGCAAAAATGTG+TGG | - | chr1.4:47755274-47755293 | MS.gene055644:CDS | 30.0% | |
| TTAATGCTTCCATATGCATT+AGG | - | chr1.4:47758427-47758446 | MS.gene055644:intron | 30.0% | |
| TTACAACATTCAACTAGTTG+TGG | + | chr1.4:47757347-47757366 | None:intergenic | 30.0% | |
| TTCATTACATTAGTGTATCC+AGG | + | chr1.4:47755725-47755744 | None:intergenic | 30.0% | |
| TTGCATTTCCCTGTTAATAA+TGG | + | chr1.4:47757939-47757958 | None:intergenic | 30.0% | |
| TTTACTTAGAAACAATCCCA+GGG | + | chr1.4:47757101-47757120 | None:intergenic | 30.0% | |
| ! | ATGCATTCTCCAGTTAATTT+TGG | - | chr1.4:47758639-47758658 | MS.gene055644:intron | 30.0% |
| ! | GCTTTTGAACCATTATTAAC+AGG | - | chr1.4:47757927-47757946 | MS.gene055644:intron | 30.0% |
| ! | GGTTGCTTTATATCACAAAA+AGG | - | chr1.4:47757873-47757892 | MS.gene055644:intron | 30.0% |
| ! | TGCAAAAATGTGTGGATTTT+CGG | - | chr1.4:47755282-47755301 | MS.gene055644:CDS | 30.0% |
| ! | TGTAGAATGATGCTGATTAT+TGG | - | chr1.4:47759090-47759109 | MS.gene055644:intron | 30.0% |
| ! | TGTGTGTGTTACTAATATGT+AGG | + | chr1.4:47758551-47758570 | None:intergenic | 30.0% |
| !! | AGATGTTTTTGTTATGTGTG+TGG | - | chr1.4:47755366-47755385 | MS.gene055644:intron | 30.0% |
| !! | GACATAACTAATGTTTTGGA+AGG | - | chr1.4:47756320-47756339 | MS.gene055644:intron | 30.0% |
| !! | GCTTTGAAATTTCACTAGTA+TGG | - | chr1.4:47754930-47754949 | MS.gene055644:CDS | 30.0% |
| AAAACTCCTTTGTCTGCAAA+AGG | - | chr1.4:47755755-47755774 | MS.gene055644:intron | 35.0% | |
| AAACTCCTTTGTCTGCAAAA+GGG | - | chr1.4:47755756-47755775 | MS.gene055644:intron | 35.0% | |
| AACTTGATTACTTTGTGGTC+TGG | + | chr1.4:47757179-47757198 | None:intergenic | 35.0% | |
| AATGTTTCACAAGAGTTTGC+TGG | - | chr1.4:47758857-47758876 | MS.gene055644:intron | 35.0% | |
| AATTAGTTCCAGGTGTCAAT+AGG | + | chr1.4:47756593-47756612 | None:intergenic | 35.0% | |
| AGAGACTAGATGATCAGATA+AGG | - | chr1.4:47757844-47757863 | MS.gene055644:intron | 35.0% | |
| ATACTTACATCAGCATCTGA+AGG | + | chr1.4:47758902-47758921 | None:intergenic | 35.0% | |
| ATCAACATTAGCTGTTATGC+TGG | + | chr1.4:47759261-47759280 | None:intergenic | 35.0% | |
| ATCCTGAGGAAGTAAGTTTA+GGG | - | chr1.4:47758342-47758361 | MS.gene055644:intron | 35.0% | |
| ATTAAGTCTAATGCTTGGCT+TGG | - | chr1.4:47755101-47755120 | MS.gene055644:intron | 35.0% | |
| ATTAGAATGACTTAGTGGCA+TGG | - | chr1.4:47757684-47757703 | MS.gene055644:intron | 35.0% | |
| CAATTGATGTCTACCTTATC+AGG | - | chr1.4:47758504-47758523 | MS.gene055644:intron | 35.0% | |
| CCAATTAACAACATGTTGCA+AGG | + | chr1.4:47757765-47757784 | None:intergenic | 35.0% | |
| CCATAAGAAACTATAAGCTG+GGG | + | chr1.4:47755927-47755946 | None:intergenic | 35.0% | |
| CCTTGCAACATGTTGTTAAT+TGG | - | chr1.4:47757762-47757781 | MS.gene055644:intron | 35.0% | |
| CGGATAAGATTACTGTACAT+TGG | - | chr1.4:47755305-47755324 | MS.gene055644:CDS | 35.0% | |
| CGGATACTATTGTTGTACAT+TGG | - | chr1.4:47754989-47755008 | MS.gene055644:CDS | 35.0% | |
| CTAGTGAAATTTCAAAGCCT+CGG | + | chr1.4:47754928-47754947 | None:intergenic | 35.0% | |
| CTATACTATAGGTGCAAAAG+AGG | - | chr1.4:47756288-47756307 | MS.gene055644:intron | 35.0% | |
| CTGATAAGGTAGACATCAAT+TGG | + | chr1.4:47758506-47758525 | None:intergenic | 35.0% | |
| GAACATTCTCCTCTAACATA+TGG | + | chr1.4:47757325-47757344 | None:intergenic | 35.0% | |
| GAGTTAGCATAACAGATATG+TGG | - | chr1.4:47759129-47759148 | MS.gene055644:intron | 35.0% | |
| GCAAGTAGTTATACCTGATA+AGG | + | chr1.4:47758520-47758539 | None:intergenic | 35.0% | |
| GCATAACAGCTAATGTTGAT+TGG | - | chr1.4:47759261-47759280 | MS.gene055644:CDS | 35.0% | |
| GCCATAAGAAACTATAAGCT+GGG | + | chr1.4:47755928-47755947 | None:intergenic | 35.0% | |
| GCTCTAACTTGATTACTTTG+TGG | + | chr1.4:47757184-47757203 | None:intergenic | 35.0% | |
| GTCACAAAAAGGAACCTAAA+AGG | + | chr1.4:47758105-47758124 | None:intergenic | 35.0% | |
| GTTTACTTAGAAACAATCCC+AGG | + | chr1.4:47757102-47757121 | None:intergenic | 35.0% | |
| TAAAACGAAGAAGAACACAC+CGG | + | chr1.4:47754591-47754610 | None:intergenic | 35.0% | |
| TACTTACATCAGCATCTGAA+GGG | + | chr1.4:47758901-47758920 | None:intergenic | 35.0% | |
| TGCCATAAGAAACTATAAGC+TGG | + | chr1.4:47755929-47755948 | None:intergenic | 35.0% | |
| TGGAAATGAATATACACGAG+CGG | + | chr1.4:47756643-47756662 | None:intergenic | 35.0% | |
| TGGTGATATCTCTTTGCTTA+AGG | - | chr1.4:47756538-47756557 | MS.gene055644:intron | 35.0% | |
| TTAGGGAATCAACTGATGAA+AGG | - | chr1.4:47758359-47758378 | MS.gene055644:intron | 35.0% | |
| TTCATAAACTTTGAGTGCCT+TGG | - | chr1.4:47755389-47755408 | MS.gene055644:intron | 35.0% | |
| TTCATAAGTGAGCATTACCA+AGG | + | chr1.4:47755409-47755428 | None:intergenic | 35.0% | |
| TTGAATTCAGATCCAGTGTT+AGG | + | chr1.4:47754876-47754895 | None:intergenic | 35.0% | |
| TTGATGTGTGTGTGTATCTT+TGG | - | chr1.4:47755582-47755601 | MS.gene055644:intron | 35.0% | |
| TTGATTAAACACTTCGGATG+CGG | - | chr1.4:47758996-47759015 | MS.gene055644:intron | 35.0% | |
| TTGCTGCACTCAACATTTAA+CGG | - | chr1.4:47756677-47756696 | MS.gene055644:intron | 35.0% | |
| ! | AAAAATGTGTGGATTTTCGG+CGG | - | chr1.4:47755285-47755304 | MS.gene055644:CDS | 35.0% |
| ! | AAAGCTTTTCTGTCTCAATG+GGG | - | chr1.4:47756964-47756983 | MS.gene055644:intron | 35.0% |
| ! | AATCATTCTAAGGAGCACAA+TGG | - | chr1.4:47758478-47758497 | MS.gene055644:intron | 35.0% |
| ! | ACAATACTTTTCCTTCTGGA+AGG | + | chr1.4:47758046-47758065 | None:intergenic | 35.0% |
| ! | ATCATTCTAAGGAGCACAAT+GGG | - | chr1.4:47758479-47758498 | MS.gene055644:intron | 35.0% |
| ! | ATGTTTCACAAGAGTTTGCT+GGG | - | chr1.4:47758858-47758877 | MS.gene055644:intron | 35.0% |
| ! | CAAAGCTTTTCTGTCTCAAT+GGG | - | chr1.4:47756963-47756982 | MS.gene055644:intron | 35.0% |
| ! | CTAGTGTTTCTGATACATGA+TGG | - | chr1.4:47758400-47758419 | MS.gene055644:intron | 35.0% |
| ! | CTCTTTTGCACCTATAGTAT+AGG | + | chr1.4:47756290-47756309 | None:intergenic | 35.0% |
| ! | GACAGTTCCTTAGGTAATTT+TGG | - | chr1.4:47755995-47756014 | MS.gene055644:intron | 35.0% |
| ! | TCAAAGCTTTTCTGTCTCAA+TGG | - | chr1.4:47756962-47756981 | MS.gene055644:intron | 35.0% |
| !!! | ACTAATGTTTTGGAAGGCAT+TGG | - | chr1.4:47756326-47756345 | MS.gene055644:intron | 35.0% |
| AAACTTACTTCCTCAGGATC+AGG | + | chr1.4:47758341-47758360 | None:intergenic | 40.0% | |
| AACGGCTTCATTGACATGAT+CGG | + | chr1.4:47754556-47754575 | None:intergenic | 40.0% | |
| AACTCCTTTGTCTGCAAAAG+GGG | - | chr1.4:47755757-47755776 | MS.gene055644:intron | 40.0% | |
| AAGGTCATAAAGCGGAAGAA+TGG | - | chr1.4:47755656-47755675 | MS.gene055644:intron | 40.0% | |
| ACATGTTGTTAATTGGCTGC+TGG | - | chr1.4:47757769-47757788 | MS.gene055644:intron | 40.0% | |
| AGCCGTTATTGTTAGATCTC+CGG | - | chr1.4:47754569-47754588 | MS.gene055644:intron | 40.0% | |
| ATATCACCATCCACATTACC+AGG | + | chr1.4:47756527-47756546 | None:intergenic | 40.0% | |
| ATTACTTTGTGGTCTGGCAT+TGG | + | chr1.4:47757173-47757192 | None:intergenic | 40.0% | |
| CACCGGAGATCTAACAATAA+CGG | + | chr1.4:47754574-47754593 | None:intergenic | 40.0% | |
| CACTGGATCTGAATTCAACT+TGG | - | chr1.4:47754878-47754897 | MS.gene055644:CDS | 40.0% | |
| CAGAAACATTGAGTAGACAG+AGG | - | chr1.4:47757121-47757140 | MS.gene055644:intron | 40.0% | |
| CCCCAGCTTATAGTTTCTTA+TGG | - | chr1.4:47755924-47755943 | MS.gene055644:CDS | 40.0% | |
| CGAGTGTGTGTTTGTTTGAT+AGG | - | chr1.4:47755070-47755089 | MS.gene055644:CDS | 40.0% | |
| CTCAAACTTTCTCTCTCCTA+TGG | + | chr1.4:47756878-47756897 | None:intergenic | 40.0% | |
| GAATTATGTTGTCAGCCTTG+TGG | - | chr1.4:47757723-47757742 | MS.gene055644:intron | 40.0% | |
| GATCCTGAGGAAGTAAGTTT+AGG | - | chr1.4:47758341-47758360 | MS.gene055644:intron | 40.0% | |
| GCAAAAACAAAGAACTCACC+TGG | + | chr1.4:47758158-47758177 | None:intergenic | 40.0% | |
| GTCAGTGCTTCATAGATACT+TGG | - | chr1.4:47755251-47755270 | MS.gene055644:intron | 40.0% | |
| GTGACCGAGGAAGATATTAA+GGG | - | chr1.4:47758120-47758139 | MS.gene055644:intron | 40.0% | |
| TAAAGCAGCAGAAACTTTGC+AGG | - | chr1.4:47756187-47756206 | MS.gene055644:intron | 40.0% | |
| TACTATAGGTGCAAAAGAGG+AGG | - | chr1.4:47756291-47756310 | MS.gene055644:intron | 40.0% | |
| TAGCTGTTATGCTGGAGTTA+AGG | + | chr1.4:47759253-47759272 | None:intergenic | 40.0% | |
| TAGGCCCTTAATATCTTCCT+CGG | + | chr1.4:47758127-47758146 | None:intergenic | 40.0% | |
| TATCTTCCTCGGTCACAAAA+AGG | + | chr1.4:47758116-47758135 | None:intergenic | 40.0% | |
| TGAGCAACAAGTGACAGAAA+TGG | - | chr1.4:47758763-47758782 | MS.gene055644:intron | 40.0% | |
| TGTCGTTATGACAGTTCCTT+AGG | - | chr1.4:47755986-47756005 | MS.gene055644:intron | 40.0% | |
| TGTGACCGAGGAAGATATTA+AGG | - | chr1.4:47758119-47758138 | MS.gene055644:intron | 40.0% | |
| TTCCCTAAACTTACTTCCTC+AGG | + | chr1.4:47758347-47758366 | None:intergenic | 40.0% | |
| ! | AAAATTGGAGGGATTTTCCG+AGG | - | chr1.4:47754908-47754927 | MS.gene055644:CDS | 40.0% |
| ! | AAGTATATCACAGCCTTGTG+AGG | - | chr1.4:47758916-47758935 | MS.gene055644:intron | 40.0% |
| ! | ACAGCTAATGTTGATTGGAG+TGG | - | chr1.4:47759266-47759285 | MS.gene055644:CDS | 40.0% |
| ! | AGGACATGATTTGCCTTCTT+TGG | + | chr1.4:47755807-47755826 | None:intergenic | 40.0% |
| ! | AGTATATCACAGCCTTGTGA+GGG | - | chr1.4:47758917-47758936 | MS.gene055644:intron | 40.0% |
| ! | CACTTCATACTGGGGATTTT+GGG | - | chr1.4:47758949-47758968 | MS.gene055644:intron | 40.0% |
| ! | CCAGGGTACTTGATAAAACT+TGG | - | chr1.4:47757407-47757426 | MS.gene055644:CDS | 40.0% |
| ! | TAATGTTGATTGGAGTGGAG+TGG | - | chr1.4:47759271-47759290 | MS.gene055644:CDS | 40.0% |
| ! | TACCTCTTGCTTCAAGTTCA+GGG | - | chr1.4:47758735-47758754 | MS.gene055644:intron | 40.0% |
| ! | TGTGTCGAAAACATTTTCGG+CGG | - | chr1.4:47754969-47754988 | MS.gene055644:CDS | 40.0% |
| ! | TTACCTCTTGCTTCAAGTTC+AGG | - | chr1.4:47758734-47758753 | MS.gene055644:intron | 40.0% |
| ! | TTAGAGGCACATGTATGCAA+AGG | - | chr1.4:47757619-47757638 | MS.gene055644:CDS | 40.0% |
| ! | TTCTGACCAGCATTTGAGAT+AGG | + | chr1.4:47755836-47755855 | None:intergenic | 40.0% |
| !! | AGAAGCACTAGAAACTCCAT+AGG | - | chr1.4:47756859-47756878 | MS.gene055644:intron | 40.0% |
| !! | AGTTCTAAGTCAAAGCCACA+AGG | + | chr1.4:47757741-47757760 | None:intergenic | 40.0% |
| !! | ATACTTTTCCTTCTGGAAGG+AGG | + | chr1.4:47758043-47758062 | None:intergenic | 40.0% |
| !! | ATGAACATGTTGGTGGTGTA+AGG | - | chr1.4:47755637-47755656 | MS.gene055644:CDS | 40.0% |
| !! | CCAAGTTTTATCAAGTACCC+TGG | + | chr1.4:47757410-47757429 | None:intergenic | 40.0% |
| !! | GTATCTATGAAGCACTGACA+CGG | + | chr1.4:47755250-47755269 | None:intergenic | 40.0% |
| !! | TATTGGCTTCTATCAGATGC+TGG | - | chr1.4:47759107-47759126 | MS.gene055644:intron | 40.0% |
| !! | TGCAGACAAAGGAGTTTTGA+AGG | + | chr1.4:47755753-47755772 | None:intergenic | 40.0% |
| !! | TGTTTCACAAGAGTTTGCTG+GGG | - | chr1.4:47758859-47758878 | MS.gene055644:intron | 40.0% |
| !!! | AGCACTGACACTTTTACCAA+AGG | - | chr1.4:47755125-47755144 | MS.gene055644:intron | 40.0% |
| !!! | CAGACAAAGGAGTTTTGAAG+GGG | + | chr1.4:47755751-47755770 | None:intergenic | 40.0% |
| !!! | GCAGACAAAGGAGTTTTGAA+GGG | + | chr1.4:47755752-47755771 | None:intergenic | 40.0% |
| AAAGAACTCACCTGGAAGCA+AGG | + | chr1.4:47758150-47758169 | None:intergenic | 45.0% | |
| AAATCCCCAGTATGAAGTGG+AGG | + | chr1.4:47758948-47758967 | None:intergenic | 45.0% | |
| AACGCAAGATGACGCTTCAA+CGG | + | chr1.4:47754459-47754478 | None:intergenic | 45.0% | |
| AATCCCCAGTATGAAGTGGA+GGG | + | chr1.4:47758947-47758966 | None:intergenic | 45.0% | |
| ACATTACCTCCTCAAGCTCA+GGG | - | chr1.4:47757055-47757074 | MS.gene055644:intron | 45.0% | |
| ACGGCTGTCATCAATGTTTG+AGG | - | chr1.4:47757232-47757251 | MS.gene055644:CDS | 45.0% | |
| ACTCCTTTGTCTGCAAAAGG+GGG | - | chr1.4:47755758-47755777 | MS.gene055644:intron | 45.0% | |
| AGAAGACCTGCAAAGTGAAC+GGG | - | chr1.4:47757270-47757289 | MS.gene055644:intron | 45.0% | |
| AGCAGAAGCCCATATGTTAG+AGG | - | chr1.4:47757313-47757332 | MS.gene055644:intron | 45.0% | |
| AGCATGGGGATTATGTGAGA+TGG | + | chr1.4:47757434-47757453 | None:intergenic | 45.0% | |
| AGGTCTTCTGTGATGCTGAT+TGG | + | chr1.4:47757259-47757278 | None:intergenic | 45.0% | |
| ATAGCAATCAAAGCTCCGCA+TGG | - | chr1.4:47758299-47758318 | MS.gene055644:intron | 45.0% | |
| CAAAAGTCAAGTAACAGCCC+TGG | - | chr1.4:47755704-47755723 | MS.gene055644:intron | 45.0% | |
| CAGAAGACCTGCAAAGTGAA+CGG | - | chr1.4:47757269-47757288 | MS.gene055644:intron | 45.0% | |
| CCAAAATCCCCAGTATGAAG+TGG | + | chr1.4:47758951-47758970 | None:intergenic | 45.0% | |
| CCAACACCTATCTCAAATGC+TGG | - | chr1.4:47755827-47755846 | MS.gene055644:intron | 45.0% | |
| CCAACATGAGGGAAAGAAAG+AGG | - | chr1.4:47757454-47757473 | MS.gene055644:CDS | 45.0% | |
| CCTCTTTCTTTCCCTCATGT+TGG | + | chr1.4:47757457-47757476 | None:intergenic | 45.0% | |
| CTATAAGCTGGGGTACAACA+AGG | + | chr1.4:47755917-47755936 | None:intergenic | 45.0% | |
| GCACTCAACATTTAACGGCT+CGG | - | chr1.4:47756682-47756701 | MS.gene055644:intron | 45.0% | |
| GCATGGGGATTATGTGAGAT+GGG | + | chr1.4:47757433-47757452 | None:intergenic | 45.0% | |
| GGAAGTTGACAACCTTTCTC+TGG | - | chr1.4:47757815-47757834 | MS.gene055644:intron | 45.0% | |
| GGAATTGAATCTTCTACGCC+TGG | - | chr1.4:47756506-47756525 | MS.gene055644:intron | 45.0% | |
| GGTGGTGTAAGGTCATAAAG+CGG | - | chr1.4:47755648-47755667 | MS.gene055644:CDS | 45.0% | |
| TAACCCGAAGATCAGTACCA+GGG | - | chr1.4:47757390-47757409 | MS.gene055644:intron | 45.0% | |
| TACATTACCTCCTCAAGCTC+AGG | - | chr1.4:47757054-47757073 | MS.gene055644:intron | 45.0% | |
| TACTCATCAGTCGGTGCAAA+CGG | + | chr1.4:47754498-47754517 | None:intergenic | 45.0% | |
| TCTGCGGCATGCATTTGTAT+TGG | + | chr1.4:47757206-47757225 | None:intergenic | 45.0% | |
| TCTTGAGACCTATTGACACC+TGG | - | chr1.4:47756582-47756601 | MS.gene055644:intron | 45.0% | |
| TGAAGCAAGAGGTAAGCTTG+CGG | + | chr1.4:47758729-47758748 | None:intergenic | 45.0% | |
| TGAGCTAGTGGTGGTTATTC+AGG | + | chr1.4:47756935-47756954 | None:intergenic | 45.0% | |
| TGATTCATAGGCAGTACCCT+GGG | - | chr1.4:47757082-47757101 | MS.gene055644:intron | 45.0% | |
| TTGATTCATAGGCAGTACCC+TGG | - | chr1.4:47757081-47757100 | MS.gene055644:intron | 45.0% | |
| TTTCCCTCATGTTGGAGCAT+GGG | + | chr1.4:47757449-47757468 | None:intergenic | 45.0% | |
| TTTGTCTGCAAAAGGGGGAA+GGG | - | chr1.4:47755763-47755782 | MS.gene055644:intron | 45.0% | |
| ! | ATCTTCTACGCCTGGTAATG+TGG | - | chr1.4:47756514-47756533 | MS.gene055644:intron | 45.0% |
| ! | CCACTTCATACTGGGGATTT+TGG | - | chr1.4:47758948-47758967 | MS.gene055644:intron | 45.0% |
| ! | CCAGCATTTGAGATAGGTGT+TGG | + | chr1.4:47755830-47755849 | None:intergenic | 45.0% |
| ! | TAGGTTCCTTTTTGTGACCG+AGG | - | chr1.4:47758107-47758126 | MS.gene055644:intron | 45.0% |
| !! | AAGTCAAGGGCATCCAAAGA+AGG | - | chr1.4:47755791-47755810 | MS.gene055644:CDS | 45.0% |
| !! | ACTTTTACCAAAGGCGTGTC+TGG | - | chr1.4:47755134-47755153 | MS.gene055644:intron | 45.0% |
| !! | AGTACCCTGGTACTGATCTT+CGG | + | chr1.4:47757397-47757416 | None:intergenic | 45.0% |
| !! | CTCGAGAGCATTTCAAAGTC+AGG | + | chr1.4:47759308-47759327 | None:intergenic | 45.0% |
| !! | CTGACTTTGAAATGCTCTCG+AGG | - | chr1.4:47759306-47759325 | MS.gene055644:CDS | 45.0% |
| !! | CTTTCGCTGCTGTTGATTCT+AGG | - | chr1.4:47754523-47754542 | MS.gene055644:intron | 45.0% |
| !! | GCATTTGAGATAGGTGTTGG+AGG | + | chr1.4:47755827-47755846 | None:intergenic | 45.0% |
| !! | GTTTCACAAGAGTTTGCTGG+GGG | - | chr1.4:47758860-47758879 | MS.gene055644:intron | 45.0% |
| !! | TTAGGGTTAGCTACAGTCGA+TGG | + | chr1.4:47759365-47759384 | None:intergenic | 45.0% |
| !! | TTGTGGCTTTGTCTTGCAGT+CGG | - | chr1.4:47757794-47757813 | MS.gene055644:CDS | 45.0% |
| !!! | TTTTTTATTTTTATTTTTTG+TGG | - | chr1.4:47754715-47754734 | MS.gene055644:intron | 5.0% |
| AACTCACCTGGAAGCAAGGT+AGG | + | chr1.4:47758146-47758165 | None:intergenic | 50.0% | |
| AAGCAAGAGGTAAGCTTGCG+GGG | + | chr1.4:47758727-47758746 | None:intergenic | 50.0% | |
| AATCAACCACCCTGAGCTTG+AGG | + | chr1.4:47757067-47757086 | None:intergenic | 50.0% | |
| AATCCCCATGCTCCAACATG+AGG | - | chr1.4:47757442-47757461 | MS.gene055644:CDS | 50.0% | |
| ACCTGCTGAATGCAGTGGAA+AGG | - | chr1.4:47758787-47758806 | MS.gene055644:intron | 50.0% | |
| ACTTCCAAGGTGGTTCCATG+CGG | + | chr1.4:47758317-47758336 | None:intergenic | 50.0% | |
| AGGATCAGGAACTTCCAAGG+TGG | + | chr1.4:47758327-47758346 | None:intergenic | 50.0% | |
| ATCCCCAGTATGAAGTGGAG+GGG | + | chr1.4:47758946-47758965 | None:intergenic | 50.0% | |
| ATCCCCATGCTCCAACATGA+GGG | - | chr1.4:47757443-47757462 | MS.gene055644:CDS | 50.0% | |
| ATGGTACCTGCTGAATGCAG+TGG | - | chr1.4:47758782-47758801 | MS.gene055644:intron | 50.0% | |
| CAATTCCTCTGCATGCCACA+AGG | + | chr1.4:47756493-47756512 | None:intergenic | 50.0% | |
| CGTCAACGGCCTAATGCATA+TGG | + | chr1.4:47758439-47758458 | None:intergenic | 50.0% | |
| CTAACCCGAAGATCAGTACC+AGG | - | chr1.4:47757389-47757408 | MS.gene055644:intron | 50.0% | |
| CTATGACCCGTTCACTTTGC+AGG | + | chr1.4:47757279-47757298 | None:intergenic | 50.0% | |
| CTCAGGATCAGGAACTTCCA+AGG | + | chr1.4:47758330-47758349 | None:intergenic | 50.0% | |
| CTGCAAAGTGAACGGGTCAT+AGG | - | chr1.4:47757277-47757296 | MS.gene055644:intron | 50.0% | |
| CTTGGAAGTTCCTGATCCTG+AGG | - | chr1.4:47758328-47758347 | MS.gene055644:intron | 50.0% | |
| CTTTCCCTCATGTTGGAGCA+TGG | + | chr1.4:47757450-47757469 | None:intergenic | 50.0% | |
| CTTTGTCTGCAAAAGGGGGA+AGG | - | chr1.4:47755762-47755781 | MS.gene055644:intron | 50.0% | |
| GAAGCAAGAGGTAAGCTTGC+GGG | + | chr1.4:47758728-47758747 | None:intergenic | 50.0% | |
| GACCCTGAACTTGAAGCAAG+AGG | + | chr1.4:47758740-47758759 | None:intergenic | 50.0% | |
| GACTGCAAGACAAAGCCACA+AGG | + | chr1.4:47757795-47757814 | None:intergenic | 50.0% | |
| GGGAAGGGCAAACAAGTCAA+GGG | - | chr1.4:47755778-47755797 | MS.gene055644:intron | 50.0% | |
| GTCTCTGCTCTTCCAGAGAA+AGG | + | chr1.4:47757830-47757849 | None:intergenic | 50.0% | |
| TAACCACCACTAGCTCACTG+AGG | - | chr1.4:47756938-47756957 | MS.gene055644:intron | 50.0% | |
| TCAAACACCAGACACGCCTT+TGG | + | chr1.4:47755144-47755163 | None:intergenic | 50.0% | |
| TCAAACCTTGTGGCATGCAG+AGG | - | chr1.4:47756485-47756504 | MS.gene055644:intron | 50.0% | |
| TCATAACGACAGCTACCAGC+AGG | + | chr1.4:47755977-47755996 | None:intergenic | 50.0% | |
| TCCTTTCCACTGCATTCAGC+AGG | + | chr1.4:47758791-47758810 | None:intergenic | 50.0% | |
| TCTCCGCTGTAGTTCGTCAA+CGG | + | chr1.4:47758453-47758472 | None:intergenic | 50.0% | |
| TGACAGCCGTTCTACTTCTG+CGG | + | chr1.4:47757222-47757241 | None:intergenic | 50.0% | |
| TGAGAAGAGAGCAGAGCTTG+AGG | + | chr1.4:47758821-47758840 | None:intergenic | 50.0% | |
| TGCATGCCGCAGAAGTAGAA+CGG | - | chr1.4:47757213-47757232 | MS.gene055644:intron | 50.0% | |
| TGCTTTGTCCTCCTTCCAGA+AGG | - | chr1.4:47758032-47758051 | MS.gene055644:CDS | 50.0% | |
| TTCCCCCTCCACTTCATACT+GGG | - | chr1.4:47758940-47758959 | MS.gene055644:intron | 50.0% | |
| TTCCCTCATGTTGGAGCATG+GGG | + | chr1.4:47757448-47757467 | None:intergenic | 50.0% | |
| TTTGAGCCTCAGTGAGCTAG+TGG | + | chr1.4:47756947-47756966 | None:intergenic | 50.0% | |
| ! | CTTCCCCCTTTTGCAGACAA+AGG | + | chr1.4:47755764-47755783 | None:intergenic | 50.0% |
| ! | GCTCAGGGTGGTTGATTCAT+AGG | - | chr1.4:47757070-47757089 | MS.gene055644:intron | 50.0% |
| ! | TCTACGCCTGGTAATGTGGA+TGG | - | chr1.4:47756518-47756537 | MS.gene055644:intron | 50.0% |
| ! | TTAACGGCTCGGACTCTTGT+TGG | - | chr1.4:47756693-47756712 | MS.gene055644:intron | 50.0% |
| !! | GGTACTGATCTTCGGGTTAG+TGG | + | chr1.4:47757389-47757408 | None:intergenic | 50.0% |
| !! | GTACCCTGGTACTGATCTTC+GGG | + | chr1.4:47757396-47757415 | None:intergenic | 50.0% |
| !! | TTAATTGGCTGCTGGCCTTG+TGG | - | chr1.4:47757777-47757796 | MS.gene055644:CDS | 50.0% |
| AGCAAGAGGTAAGCTTGCGG+GGG | + | chr1.4:47758726-47758745 | None:intergenic | 55.0% | |
| AGGCCGTTGACGAACTACAG+CGG | - | chr1.4:47758447-47758466 | MS.gene055644:intron | 55.0% | |
| CCATTTGCTCAAGCGTGCTG+AGG | - | chr1.4:47756145-47756164 | MS.gene055644:intron | 55.0% | |
| CCTCAGCACGCTTGAGCAAA+TGG | + | chr1.4:47756148-47756167 | None:intergenic | 55.0% | |
| GCAAGATGACGCTTCAACGG+CGG | + | chr1.4:47754456-47754475 | None:intergenic | 55.0% | |
| GGGGAAGGGCAAACAAGTCA+AGG | - | chr1.4:47755777-47755796 | MS.gene055644:intron | 55.0% | |
| GTTCCCCCTCCACTTCATAC+TGG | - | chr1.4:47758939-47758958 | MS.gene055644:intron | 55.0% | |
| TAAGGGCCTACCTTGCTTCC+AGG | - | chr1.4:47758137-47758156 | MS.gene055644:intron | 55.0% | |
| TCATCAGTCGGTGCAAACGG+TGG | + | chr1.4:47754495-47754514 | None:intergenic | 55.0% | |
| TCCCCAGTATGAAGTGGAGG+GGG | + | chr1.4:47758945-47758964 | None:intergenic | 55.0% | |
| TCCCCCTCCACTTCATACTG+GGG | - | chr1.4:47758941-47758960 | MS.gene055644:intron | 55.0% | |
| TTACCTCCTCAAGCTCAGGG+TGG | - | chr1.4:47757058-47757077 | MS.gene055644:intron | 55.0% | |
| TTGCTCAAGCGTGCTGAGGA+TGG | - | chr1.4:47756149-47756168 | MS.gene055644:intron | 55.0% | |
| AACTCCATCGCCGGGACTTG+CGG | - | chr1.4:47759334-47759353 | MS.gene055644:CDS | 60.0% | |
| AGCAGGAGTGAGCGGAGAAG+GGG | + | chr1.4:47755960-47755979 | None:intergenic | 60.0% | |
| AGCTCCGCATGGAACCACCT+TGG | - | chr1.4:47758310-47758329 | MS.gene055644:intron | 60.0% | |
| AGGCCACAAACTCCATCGCC+GGG | - | chr1.4:47759326-47759345 | MS.gene055644:CDS | 60.0% | |
| AGTCCCGGCGATGGAGTTTG+TGG | + | chr1.4:47759332-47759351 | None:intergenic | 60.0% | |
| ATCTGTGCTCCGGTCGGCAT+CGG | + | chr1.4:47754429-47754448 | None:intergenic | 60.0% | |
| CAACCACCCTGAGCTTGAGG+AGG | + | chr1.4:47757064-47757083 | None:intergenic | 60.0% | |
| CAGCAGGAGTGAGCGGAGAA+GGG | + | chr1.4:47755961-47755980 | None:intergenic | 60.0% | |
| CAGCTACCAGCAGGAGTGAG+CGG | + | chr1.4:47755968-47755987 | None:intergenic | 60.0% | |
| GAGCCTCAGTGAGCTAGTGG+TGG | + | chr1.4:47756944-47756963 | None:intergenic | 60.0% | |
| GAGGCCACAAACTCCATCGC+CGG | - | chr1.4:47759325-47759344 | MS.gene055644:CDS | 60.0% | |
| GATGGTGCTTCCGCAAGTCC+CGG | + | chr1.4:47759347-47759366 | None:intergenic | 60.0% | |
| GCAAGAGGTAAGCTTGCGGG+GGG | + | chr1.4:47758725-47758744 | None:intergenic | 60.0% | |
| GTCGGAAGGTCCAGCGTTAC+CGG | + | chr1.4:47754397-47754416 | None:intergenic | 60.0% | |
| TGACACGGTCACGTCGACAC+CGG | + | chr1.4:47755235-47755254 | None:intergenic | 60.0% | |
| TGCCGACCGGAGCACAGATT+CGG | - | chr1.4:47754430-47754449 | MS.gene055644:CDS | 60.0% | |
| AACGCTGGACCTTCCGACCG+TGG | - | chr1.4:47754399-47754418 | MS.gene055644:CDS | 65.0% | |
| CCAGCAGGAGTGAGCGGAGA+AGG | + | chr1.4:47755962-47755981 | None:intergenic | 65.0% | |
| CCTTCTCCGCTCACTCCTGC+TGG | - | chr1.4:47755959-47755978 | MS.gene055644:intron | 65.0% | |
| GGCCGAATCTGTGCTCCGGT+CGG | + | chr1.4:47754435-47754454 | None:intergenic | 65.0% | |
| GTGGAGGGGGAACCCTCACA+AGG | + | chr1.4:47758932-47758951 | None:intergenic | 65.0% | |
| ATCGGCGAGCCACGGTCGGA+AGG | + | chr1.4:47754411-47754430 | None:intergenic | 70.0% | |
| CGGCGGCCGAATCTGTGCTC+CGG | + | chr1.4:47754439-47754458 | None:intergenic | 70.0% | |
| GCTTCCGCAAGTCCCGGCGA+TGG | + | chr1.4:47759341-47759360 | None:intergenic | 70.0% | |
| CGTGGCTCGCCGATGCCGAC+CGG | - | chr1.4:47754417-47754436 | MS.gene055644:CDS | 75.0% | |
| !! | CGGCATCGGCGAGCCACGGT+CGG | + | chr1.4:47754415-47754434 | None:intergenic | 75.0% |
| !! | CGGTCGGCATCGGCGAGCCA+CGG | + | chr1.4:47754419-47754438 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 47754390 | 47759394 | 47754390 | ID=MS.gene055644 |
| chr1.4 | mRNA | 47754390 | 47759394 | 47754390 | ID=MS.gene055644.t1;Parent=MS.gene055644 |
| chr1.4 | exon | 47759194 | 47759394 | 47759194 | ID=MS.gene055644.t1.exon1;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47759194 | 47759394 | 47759194 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47757936 | 47758125 | 47757936 | ID=MS.gene055644.t1.exon2;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47757936 | 47758125 | 47757936 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47757777 | 47757830 | 47757777 | ID=MS.gene055644.t1.exon3;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47757777 | 47757830 | 47757777 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47757576 | 47757661 | 47757576 | ID=MS.gene055644.t1.exon4;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47757576 | 47757661 | 47757576 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47757397 | 47757485 | 47757397 | ID=MS.gene055644.t1.exon5;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47757397 | 47757485 | 47757397 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47757225 | 47757279 | 47757225 | ID=MS.gene055644.t1.exon6;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47757225 | 47757279 | 47757225 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47755919 | 47755971 | 47755919 | ID=MS.gene055644.t1.exon7;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47755919 | 47755971 | 47755919 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47755785 | 47755835 | 47755785 | ID=MS.gene055644.t1.exon8;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47755785 | 47755835 | 47755785 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47755626 | 47755674 | 47755626 | ID=MS.gene055644.t1.exon9;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47755626 | 47755674 | 47755626 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47755432 | 47755497 | 47755432 | ID=MS.gene055644.t1.exon10;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47755432 | 47755497 | 47755432 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47755259 | 47755335 | 47755259 | ID=MS.gene055644.t1.exon11;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47755259 | 47755335 | 47755259 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47754871 | 47755102 | 47754871 | ID=MS.gene055644.t1.exon12;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47754871 | 47755102 | 47754871 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47754623 | 47754689 | 47754623 | ID=MS.gene055644.t1.exon13;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47754623 | 47754689 | 47754623 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| chr1.4 | exon | 47754390 | 47754514 | 47754390 | ID=MS.gene055644.t1.exon14;Parent=MS.gene055644.t1 |
| chr1.4 | CDS | 47754390 | 47754514 | 47754390 | ID=cds.MS.gene055644.t1;Parent=MS.gene055644.t1 |
| Gene Sequence |
| Protein sequence |
