Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59435.t1 | XP_003612115.1 | 92.8 | 709 | 49 | 1 | 1 | 709 | 1 | 707 | 0.00E+00 | 1344.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59435.t1 | Q9SD34 | 42.7 | 227 | 114 | 5 | 16 | 229 | 46 | 269 | 6.0e-44 | 180.6 |
| MS.gene59435.t1 | Q9SD34 | 26.1 | 257 | 144 | 8 | 234 | 484 | 636 | 852 | 2.6e-10 | 68.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59435.t1 | G7KGD1 | 92.8 | 709 | 49 | 1 | 1 | 709 | 1 | 707 | 0.0e+00 | 1344.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050213 | MS.gene59435 | 0.814938 | 1.19E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene59435 | 0.84182 | 3.77E-58 | -1.69E-46 |
| MS.gene051226 | MS.gene59435 | 0.829856 | 4.07E-55 | -1.69E-46 |
| MS.gene051819 | MS.gene59435 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene051823 | MS.gene59435 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene59435 | 0.863967 | 1.70E-64 | -1.69E-46 |
| MS.gene052498 | MS.gene59435 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene053620 | MS.gene59435 | 0.81899 | 1.47E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene59435 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene59435 | 0.828051 | 1.11E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene59435 | 0.835806 | 1.35E-56 | -1.69E-46 |
| MS.gene054893 | MS.gene59435 | 0.837952 | 3.84E-57 | -1.69E-46 |
| MS.gene057093 | MS.gene59435 | 0.814988 | 1.16E-51 | -1.69E-46 |
| MS.gene057422 | MS.gene59435 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene057622 | MS.gene59435 | 0.807696 | 4.45E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene59435 | 0.826744 | 2.29E-54 | -1.69E-46 |
| MS.gene060964 | MS.gene59435 | 0.821562 | 3.78E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59435.t1 | MTR_5g021450 | 95.205 | 709 | 32 | 1 | 1 | 709 | 1 | 707 | 0.0 | 1357 |
| MS.gene59435.t1 | MTR_5g021450 | 91.255 | 709 | 33 | 2 | 1 | 709 | 1 | 680 | 0.0 | 1318 |
| MS.gene59435.t1 | MTR_5g021500 | 63.525 | 244 | 79 | 6 | 22 | 262 | 51 | 287 | 3.80e-91 | 310 |
| MS.gene59435.t1 | MTR_5g021500 | 41.667 | 504 | 192 | 11 | 251 | 696 | 650 | 1109 | 1.13e-83 | 289 |
| MS.gene59435.t1 | MTR_3g117490 | 58.696 | 184 | 74 | 2 | 63 | 245 | 220 | 402 | 1.07e-67 | 243 |
| MS.gene59435.t1 | MTR_3g117490 | 59.649 | 57 | 23 | 0 | 336 | 392 | 917 | 973 | 2.44e-14 | 77.8 |
| MS.gene59435.t1 | MTR_3g064280 | 36.184 | 152 | 90 | 3 | 71 | 218 | 15 | 163 | 5.33e-23 | 105 |
| MS.gene59435.t1 | MTR_3g064270 | 35.526 | 152 | 91 | 3 | 71 | 218 | 15 | 163 | 7.07e-23 | 104 |
| MS.gene59435.t1 | MTR_3g064250 | 34.839 | 155 | 94 | 3 | 65 | 215 | 9 | 160 | 9.67e-23 | 104 |
| MS.gene59435.t1 | MTR_3g064300 | 42.857 | 112 | 61 | 2 | 65 | 174 | 7 | 117 | 2.83e-22 | 97.8 |
| MS.gene59435.t1 | MTR_3g064260 | 36.184 | 152 | 90 | 3 | 71 | 218 | 15 | 163 | 3.12e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59435.t1 | AT2G18090 | 60.000 | 175 | 67 | 2 | 62 | 234 | 70 | 243 | 5.50e-72 | 250 |
| MS.gene59435.t1 | AT2G18090 | 40.777 | 103 | 47 | 3 | 336 | 433 | 458 | 551 | 1.27e-11 | 68.6 |
| MS.gene59435.t1 | AT2G18090 | 60.000 | 175 | 67 | 2 | 62 | 234 | 70 | 243 | 1.15e-71 | 249 |
| MS.gene59435.t1 | AT2G18090 | 55.769 | 52 | 23 | 0 | 336 | 387 | 458 | 509 | 2.78e-11 | 67.4 |
| MS.gene59435.t1 | AT3G51120 | 51.556 | 225 | 97 | 5 | 16 | 229 | 46 | 269 | 9.32e-68 | 243 |
| MS.gene59435.t1 | AT3G51120 | 47.436 | 78 | 38 | 1 | 324 | 398 | 716 | 793 | 3.13e-14 | 77.4 |
| MS.gene59435.t1 | AT2G16485 | 53.631 | 179 | 80 | 3 | 70 | 247 | 598 | 774 | 2.97e-57 | 212 |
| MS.gene59435.t1 | AT2G16485 | 50.909 | 55 | 27 | 0 | 334 | 388 | 1292 | 1346 | 1.82e-11 | 68.6 |
| MS.gene59435.t1 | AT2G16485 | 53.631 | 179 | 80 | 3 | 70 | 247 | 598 | 774 | 3.15e-57 | 212 |
| MS.gene59435.t1 | AT2G16485 | 50.909 | 55 | 27 | 0 | 334 | 388 | 1307 | 1361 | 1.87e-11 | 68.6 |
| MS.gene59435.t1 | AT5G63700 | 35.849 | 159 | 93 | 4 | 74 | 226 | 25 | 180 | 1.40e-25 | 112 |
| MS.gene59435.t1 | AT5G63700 | 35.849 | 159 | 93 | 4 | 74 | 226 | 25 | 180 | 2.06e-25 | 111 |
Find 193 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGAAGTGAATGGAAATT+TGG | 0.118164 | 5.4:-13169898 | MS.gene59435:CDS |
| CATAATCAGCAAACTATATC+TGG | 0.196965 | 5.4:-13169492 | MS.gene59435:CDS |
| TGAGCGGCAATGATACATTT+TGG | 0.197931 | 5.4:+13170330 | None:intergenic |
| TGATTCAGTTTCAAATCTTT+TGG | 0.228594 | 5.4:-13169736 | MS.gene59435:CDS |
| CCCTTAGCCTTCTTGTTTAT+AGG | 0.232558 | 5.4:+13170743 | None:intergenic |
| TGACAAGAAATTTCACATTT+AGG | 0.235639 | 5.4:+13170026 | None:intergenic |
| CTCCTTTCCCAGGTATTTGC+TGG | 0.263713 | 5.4:-13169288 | MS.gene59435:CDS |
| CCTCGCTCTGCTTGACAATC+TGG | 0.265321 | 5.4:+13170204 | None:intergenic |
| CAGATTCATCTGTACCATTA+GGG | 0.289928 | 5.4:+13170153 | None:intergenic |
| TCTCCTCCGGTGACCGGAAT+TGG | 0.295334 | 5.4:+13172861 | None:intergenic |
| CAACTGTGAACAACAGTCTT+TGG | 0.297579 | 5.4:-13170309 | MS.gene59435:CDS |
| CATCCCTTGCACAAGGAATA+TGG | 0.304040 | 5.4:+13171223 | None:intergenic |
| CTTTAAGATGATGACGCTTC+CGG | 0.306685 | 5.4:+13170816 | None:intergenic |
| TTGGAAGTGAATGGAAATTT+GGG | 0.307833 | 5.4:-13169897 | MS.gene59435:CDS |
| GTATGCTTCATTTGCTTTGA+TGG | 0.312007 | 5.4:-13172693 | MS.gene59435:CDS |
| ACAGATTCATCTGTACCATT+AGG | 0.319043 | 5.4:+13170152 | None:intergenic |
| GAACAGTGCCCAAGGAATTA+AGG | 0.342151 | 5.4:-13171116 | MS.gene59435:intron |
| GAGAATCCGGGGCAATCTTC+TGG | 0.344732 | 5.4:-13169807 | MS.gene59435:CDS |
| ACAGCCAGTTTGGCATTATC+AGG | 0.350770 | 5.4:-13170507 | MS.gene59435:CDS |
| CACAGCAACGACATACTAAA+AGG | 0.351524 | 5.4:+13170461 | None:intergenic |
| TCTCTCCAGATCTCAGAATA+TGG | 0.356724 | 5.4:-13170415 | MS.gene59435:CDS |
| AGACCATTACCTTAATTCCT+TGG | 0.360246 | 5.4:+13171107 | None:intergenic |
| ATCAATGATGGCACTGATGC+AGG | 0.365231 | 5.4:-13170599 | MS.gene59435:CDS |
| TTTAAGATGATGACGCTTCC+GGG | 0.365840 | 5.4:+13170817 | None:intergenic |
| GGAATTGGAGGTGGAATTAC+CGG | 0.371970 | 5.4:+13172876 | None:intergenic |
| TGGATGATGGCAGCACTCTT+TGG | 0.372356 | 5.4:-13169777 | MS.gene59435:CDS |
| CCCATGGAAATTGATGAGTT+TGG | 0.376010 | 5.4:+13169263 | None:intergenic |
| CAGGGATGGAACAGCCAGTT+TGG | 0.377541 | 5.4:-13170517 | MS.gene59435:CDS |
| AACTGTGAACAACAGTCTTT+GGG | 0.383075 | 5.4:-13170308 | MS.gene59435:CDS |
| TCATCGTTGCTTCACTCTAC+AGG | 0.389729 | 5.4:-13170536 | MS.gene59435:CDS |
| GGTAATTCCACCTCCAATTC+CGG | 0.395388 | 5.4:-13172874 | MS.gene59435:CDS |
| CCTTTACCTGCATCAAAATC+TGG | 0.396203 | 5.4:+13169600 | None:intergenic |
| GGCAATCTTCTGGTCAGAAC+TGG | 0.396564 | 5.4:-13169797 | MS.gene59435:CDS |
| TCCTTCGGCTTCTTCACAAC+CGG | 0.406432 | 5.4:+13172726 | None:intergenic |
| GACCATTACCTTAATTCCTT+GGG | 0.410068 | 5.4:+13171108 | None:intergenic |
| AGAAGGCTAAGGGAAATGTT+TGG | 0.415137 | 5.4:-13170733 | MS.gene59435:CDS |
| CATACATCTTCTTCATCCTT+CGG | 0.416063 | 5.4:+13172711 | None:intergenic |
| ATCCGACATTGAAGAGAATC+CGG | 0.417257 | 5.4:-13169820 | MS.gene59435:CDS |
| TGGCATTATCAGGATCCAAC+TGG | 0.422939 | 5.4:-13170497 | MS.gene59435:CDS |
| CACATTTAGCTCACAGGTAG+TGG | 0.423134 | 5.4:+13170667 | None:intergenic |
| ACCCTCCATATTCTGAGATC+TGG | 0.425115 | 5.4:+13170410 | None:intergenic |
| GGAATTACCGGTTGCTGAAT+CGG | 0.425535 | 5.4:+13172888 | None:intergenic |
| GATCCAACTGGGAAGGTTCA+TGG | 0.426904 | 5.4:-13170485 | MS.gene59435:CDS |
| GAAGGCTAAGGGAAATGTTT+GGG | 0.432087 | 5.4:-13170732 | MS.gene59435:CDS |
| TGCACATCTGCTTGCTGAAA+CGG | 0.437547 | 5.4:+13169513 | None:intergenic |
| GGTCACCGGAGGAGAATTTA+CGG | 0.438703 | 5.4:-13172853 | MS.gene59435:CDS |
| GTTTGGTTCCAGCAAATACC+TGG | 0.442053 | 5.4:+13169280 | None:intergenic |
| TATGTGCAGGCTCCTTTCCC+AGG | 0.444452 | 5.4:-13169298 | MS.gene59435:intron |
| CCACCCACCGATTCAGCAAC+CGG | 0.445418 | 5.4:-13172895 | MS.gene59435:CDS |
| ATTTCCATTTCTCAGCTAAA+CGG | 0.448596 | 5.4:+13172469 | None:intergenic |
| GGTTCCAATGGGTCTTCTGA+GGG | 0.448819 | 5.4:-13169876 | MS.gene59435:CDS |
| TACTGTTCATGTTCATGCTC+CGG | 0.454195 | 5.4:-13172745 | MS.gene59435:CDS |
| CTTAAAGTTGACACTGGTTG+TGG | 0.455952 | 5.4:-13170800 | MS.gene59435:CDS |
| GGATCCTGATAATGCCAAAC+TGG | 0.456226 | 5.4:+13170503 | None:intergenic |
| GGAATCAACGCTGCTGATGC+TGG | 0.458848 | 5.4:-13172807 | MS.gene59435:CDS |
| ATCTACTATACAGGAATTCT+CGG | 0.459300 | 5.4:+13170775 | None:intergenic |
| CACTTGTTCTATGTGATCAT+CGG | 0.460519 | 5.4:-13172665 | MS.gene59435:intron |
| ACTATTTGAATCTACTATAC+AGG | 0.461919 | 5.4:+13170766 | None:intergenic |
| CCCCGGATTCTCTTCAATGT+CGG | 0.462369 | 5.4:+13169818 | None:intergenic |
| GGGTTCCAATGGGTCTTCTG+AGG | 0.463383 | 5.4:-13169877 | MS.gene59435:CDS |
| TCTGAGGGTCCGAGTAATAG+TGG | 0.465669 | 5.4:-13169861 | MS.gene59435:CDS |
| GTTTCAAGACTAGGAGAGTC+TGG | 0.467881 | 5.4:-13170575 | MS.gene59435:CDS |
| AAATGTTTGGGACAGTGTCT+TGG | 0.472814 | 5.4:-13170720 | MS.gene59435:CDS |
| GTAAATTCTCCTCCGGTGAC+CGG | 0.474128 | 5.4:+13172855 | None:intergenic |
| GGTGATGCTCTGAGCTCCTC+AGG | 0.475026 | 5.4:-13169579 | MS.gene59435:CDS |
| GGAAAATAAAGAAAATAGTC+AGG | 0.478338 | 5.4:-13170270 | MS.gene59435:CDS |
| CCGATCATCGGAGTATGTTC+AGG | 0.479066 | 5.4:+13172828 | None:intergenic |
| CAAGCAGAGCGAGGAAGAAA+AGG | 0.480349 | 5.4:-13170195 | MS.gene59435:CDS |
| CGAAATGAATACTAATGAAT+CGG | 0.480617 | 5.4:-13170624 | MS.gene59435:CDS |
| CGCTGCTGATGCTGGCGTGT+CGG | 0.481436 | 5.4:-13172799 | MS.gene59435:CDS |
| CCTCCGGTGACCGGAATTGG+AGG | 0.484238 | 5.4:+13172864 | None:intergenic |
| TTCTCATCAAAGGCAGTTGA+AGG | 0.484294 | 5.4:+13169975 | None:intergenic |
| AAAATAGTCATTAGTGAAGA+AGG | 0.484940 | 5.4:+13169215 | None:intergenic |
| GTCATTCAAATTCTCATCAA+AGG | 0.485039 | 5.4:+13169965 | None:intergenic |
| CGGAACCTTCCGCCGAAGAG+TGG | 0.485800 | 5.4:-13169680 | MS.gene59435:CDS |
| GACAGTGTCTTGGACGGTGT+TGG | 0.488955 | 5.4:-13170710 | MS.gene59435:CDS |
| TCCGACATTGAAGAGAATCC+GGG | 0.491196 | 5.4:-13169819 | MS.gene59435:CDS |
| CACATCAATATCCCACTCTT+CGG | 0.493275 | 5.4:+13169668 | None:intergenic |
| ATAATCAGCAAACTATATCT+GGG | 0.493948 | 5.4:-13169491 | MS.gene59435:CDS |
| GCTATAACTGATTGTTTACA+AGG | 0.495168 | 5.4:-13169633 | MS.gene59435:CDS |
| TCCTATAAACAAGAAGGCTA+AGG | 0.495961 | 5.4:-13170744 | MS.gene59435:CDS |
| ACCAAACTCATCAATTTCCA+TGG | 0.504868 | 5.4:-13169264 | MS.gene59435:CDS |
| AATGGAAATTTGGGTTCCAA+TGG | 0.512272 | 5.4:-13169888 | MS.gene59435:CDS |
| TGAACATGAACAGTACCTTT+CGG | 0.514543 | 5.4:+13172753 | None:intergenic |
| TTGTCCTAAGGCGTATCATC+CGG | 0.517465 | 5.4:-13172520 | MS.gene59435:CDS |
| GGTAGTGCAAGGTGTACGTC+GGG | 0.517896 | 5.4:+13169996 | None:intergenic |
| CGGTTGCTCATTTGCTACAG+TGG | 0.521421 | 5.4:+13169533 | None:intergenic |
| CCGGTGACCGGAATTGGAGG+TGG | 0.522586 | 5.4:+13172867 | None:intergenic |
| CATCGTTGCTTCACTCTACA+GGG | 0.522838 | 5.4:-13170535 | MS.gene59435:CDS |
| ATGGAAATTTGGGTTCCAAT+GGG | 0.523751 | 5.4:-13169887 | MS.gene59435:CDS |
| TTTGGATGCAGTAGCGGCGG+AGG | 0.526604 | 5.4:-13169718 | MS.gene59435:CDS |
| AATGAATCGGCAATCAATGA+TGG | 0.530611 | 5.4:-13170611 | MS.gene59435:CDS |
| TCAATGATGGCACTGATGCA+GGG | 0.532158 | 5.4:-13170598 | MS.gene59435:CDS |
| CCTTCCACCACTTCATCAGA+AGG | 0.532926 | 5.4:+13169939 | None:intergenic |
| CCTATAAACAAGAAGGCTAA+GGG | 0.533302 | 5.4:-13170743 | MS.gene59435:CDS |
| TTCTGACCAGAAGATTGCCC+CGG | 0.533652 | 5.4:+13169801 | None:intergenic |
| AACTTACGAGGTGGACCCCA+TGG | 0.535838 | 5.4:+13169247 | None:intergenic |
| GTGTACTGGTTGTACTTGAA+AGG | 0.537125 | 5.4:-13170926 | MS.gene59435:CDS |
| TGCTGTTCGTGCGAGTTGCA+AGG | 0.542742 | 5.4:-13170849 | MS.gene59435:CDS |
| CCACCTCCAATTCCGGTCAC+CGG | 0.545856 | 5.4:-13172867 | MS.gene59435:CDS |
| AGTGTCTTGGACGGTGTTGG+AGG | 0.546056 | 5.4:-13170707 | MS.gene59435:CDS |
| TTTGGGAGCCAATGTTACAT+TGG | 0.547021 | 5.4:-13170291 | MS.gene59435:CDS |
| TTCTGGTCAGAACTGGATGA+TGG | 0.548380 | 5.4:-13169790 | MS.gene59435:CDS |
| TCACTTTGCCCACTATTACT+CGG | 0.553393 | 5.4:+13169852 | None:intergenic |
| AAATGTGAAATTTCTTGTCA+TGG | 0.555258 | 5.4:-13170023 | MS.gene59435:CDS |
| GCAGATGGGAATATCAGTGA+TGG | 0.557781 | 5.4:-13170083 | MS.gene59435:CDS |
| ATATCCCACTCTTCGGCGGA+AGG | 0.557902 | 5.4:+13169675 | None:intergenic |
| GCACGAACAGCACCTTTCCA+AGG | 0.558666 | 5.4:+13170860 | None:intergenic |
| AGGACCCGTAAATTCTCCTC+CGG | 0.559723 | 5.4:+13172848 | None:intergenic |
| GATGAAGTGGTGGAAGGTCA+TGG | 0.560027 | 5.4:-13169933 | MS.gene59435:CDS |
| GCAGAGCGAGGAAGAAAAGG+TGG | 0.561088 | 5.4:-13170192 | MS.gene59435:CDS |
| CCAAACTCATCAATTTCCAT+GGG | 0.564845 | 5.4:-13169263 | MS.gene59435:CDS |
| CCTGAACATACTCCGATGAT+CGG | 0.567053 | 5.4:-13172828 | MS.gene59435:CDS |
| TGTATTCACATTTAGCTCAC+AGG | 0.568532 | 5.4:+13170661 | None:intergenic |
| TGCTTCATTTGCTTTGATGG+TGG | 0.571881 | 5.4:-13172690 | MS.gene59435:CDS |
| AAATAGTCCTATAAACAAGA+AGG | 0.573367 | 5.4:-13170750 | MS.gene59435:CDS |
| GATATTGATGTGTTCACTGA+TGG | 0.573671 | 5.4:-13169657 | MS.gene59435:CDS |
| TGGCATCTATGTAGCGATTG+TGG | 0.573894 | 5.4:-13171277 | MS.gene59435:CDS |
| AATAAAGAAAATAGTCAGGA+TGG | 0.574172 | 5.4:-13170266 | MS.gene59435:CDS |
| GTCACCGGAGGAGAATTTAC+GGG | 0.579781 | 5.4:-13172852 | MS.gene59435:CDS |
| CTTGCACAAGGAATATGGAC+AGG | 0.580161 | 5.4:+13171228 | None:intergenic |
| GATGAATCTGTTAAGAGCAA+CGG | 0.581049 | 5.4:-13170140 | MS.gene59435:CDS |
| GGCATTATCAGGATCCAACT+GGG | 0.585946 | 5.4:-13170496 | MS.gene59435:CDS |
| GTTTGTGCGGAGCATGCTTG+AGG | 0.586691 | 5.4:-13171156 | MS.gene59435:CDS |
| GGACCATGAACCTTCCCAGT+TGG | 0.586869 | 5.4:+13170482 | None:intergenic |
| GGAACCTTCCGCCGAAGAGT+GGG | 0.589294 | 5.4:-13169679 | MS.gene59435:CDS |
| TGTCCATATTCCTTGTGCAA+GGG | 0.590101 | 5.4:-13171226 | MS.gene59435:CDS |
| AGTGTGACTACACAAGCAGA+TGG | 0.591958 | 5.4:-13170098 | MS.gene59435:CDS |
| GATTCATCTGTACCATTAGG+GGG | 0.594328 | 5.4:+13170155 | None:intergenic |
| CCTTCTGATGAAGTGGTGGA+AGG | 0.595557 | 5.4:-13169939 | MS.gene59435:CDS |
| CATCATCTTAAAGTTGACAC+TGG | 0.595832 | 5.4:-13170806 | MS.gene59435:CDS |
| CTGATCGAGAACAGTGCCCA+AGG | 0.596069 | 5.4:-13171124 | MS.gene59435:CDS |
| CACGCCGGATGATACGCCTT+AGG | 0.596118 | 5.4:+13172516 | None:intergenic |
| CTCCAGATCTCAGAATATGG+AGG | 0.596407 | 5.4:-13170412 | MS.gene59435:CDS |
| CGGACCCTCAGAAGACCCAT+TGG | 0.597449 | 5.4:+13169872 | None:intergenic |
| CAATGATGGCACTGATGCAG+GGG | 0.597789 | 5.4:-13170597 | MS.gene59435:CDS |
| CTGTCCATATTCCTTGTGCA+AGG | 0.598848 | 5.4:-13171227 | MS.gene59435:CDS |
| ATTTGCTACAGTGGATTGAG+AGG | 0.601818 | 5.4:+13169542 | None:intergenic |
| TCTGCTTGTGTAGTCACACT+AGG | 0.601867 | 5.4:+13170101 | None:intergenic |
| GATGCAGGGGTTTCAAGACT+AGG | 0.604571 | 5.4:-13170584 | MS.gene59435:CDS |
| GTTGCTTCACTCTACAGGGA+TGG | 0.604743 | 5.4:-13170531 | MS.gene59435:CDS |
| TTTGCTACAGTGGATTGAGA+GGG | 0.605774 | 5.4:+13169543 | None:intergenic |
| GCAGCGTTGATTCCGATCAT+CGG | 0.607097 | 5.4:+13172816 | None:intergenic |
| TCCAGATCTCAGAATATGGA+GGG | 0.608096 | 5.4:-13170411 | MS.gene59435:CDS |
| CAGATGGGAATATCAGTGAT+GGG | 0.610058 | 5.4:-13170082 | MS.gene59435:CDS |
| GTTGCAAGGTTCAAACTCCC+CGG | 0.610227 | 5.4:-13170835 | MS.gene59435:CDS |
| ATTACCGGTTGCTGAATCGG+TGG | 0.610608 | 5.4:+13172891 | None:intergenic |
| ATCAATATCCCACTCTTCGG+CGG | 0.610806 | 5.4:+13169671 | None:intergenic |
| TTACCGGTTGCTGAATCGGT+GGG | 0.611860 | 5.4:+13172892 | None:intergenic |
| CTGAGGGTCCGAGTAATAGT+GGG | 0.616707 | 5.4:-13169860 | MS.gene59435:CDS |
| TTCCAGCAAATACCTGGGAA+AGG | 0.617718 | 5.4:+13169286 | None:intergenic |
| AAACGCGGTCGTCCGCCGAA+AGG | 0.620370 | 5.4:-13172768 | MS.gene59435:CDS |
| ATGAAGTGGTGGAAGGTCAT+GGG | 0.621645 | 5.4:-13169932 | MS.gene59435:CDS |
| GACTGTTGTTCACAGTTGAG+CGG | 0.623812 | 5.4:+13170314 | None:intergenic |
| GTGTGACTACACAAGCAGAT+GGG | 0.629009 | 5.4:-13170097 | MS.gene59435:CDS |
| TTGAAACTGAATCATCAACT+AGG | 0.629198 | 5.4:+13169745 | None:intergenic |
| TTCATCTGTACCATTAGGGG+GGG | 0.630127 | 5.4:+13170157 | None:intergenic |
| TTAAGATGATGACGCTTCCG+GGG | 0.630843 | 5.4:+13170818 | None:intergenic |
| TTATCAGGATCCAACTGGGA+AGG | 0.637004 | 5.4:-13170492 | MS.gene59435:CDS |
| CAGAGCGAGGAAGAAAAGGT+GGG | 0.637763 | 5.4:-13170191 | MS.gene59435:CDS |
| GAATCTGTTAAGAGCAACGG+AGG | 0.639328 | 5.4:-13170137 | MS.gene59435:CDS |
| AATATCAGTGATGGGCAAAG+TGG | 0.641070 | 5.4:-13170074 | MS.gene59435:CDS |
| CCAGATTGTCAAGCAGAGCG+AGG | 0.642283 | 5.4:-13170204 | MS.gene59435:CDS |
| GTTAGTGTCAGAGCAAACAA+AGG | 0.643829 | 5.4:-13171178 | MS.gene59435:CDS |
| GACAGGTATAGCACATGTAG+TGG | 0.644673 | 5.4:+13171245 | None:intergenic |
| TTTGGTTCCAGCAAATACCT+GGG | 0.645945 | 5.4:+13169281 | None:intergenic |
| TGACAAACCTTCTGATGAAG+TGG | 0.646213 | 5.4:-13169946 | MS.gene59435:CDS |
| AGATTCATCTGTACCATTAG+GGG | 0.648209 | 5.4:+13170154 | None:intergenic |
| CCTCCAATTCCGGTCACCGG+AGG | 0.649112 | 5.4:-13172864 | MS.gene59435:CDS |
| TCGTTGCTGTGCAAGTTGAA+AGG | 0.650161 | 5.4:-13170449 | MS.gene59435:CDS |
| ATTCATCTGTACCATTAGGG+GGG | 0.651828 | 5.4:+13170156 | None:intergenic |
| AGGCAGTTGAAGGTAGTGCA+AGG | 0.655786 | 5.4:+13169985 | None:intergenic |
| CAAACCTTCTGATGAAGTGG+TGG | 0.658297 | 5.4:-13169943 | MS.gene59435:CDS |
| CCGGTTGCTGAATCGGTGGG+TGG | 0.661540 | 5.4:+13172895 | None:intergenic |
| AGAGCAAACAAAGGTTTGTG+CGG | 0.664820 | 5.4:-13171169 | MS.gene59435:CDS |
| TAATCAGCAAACTATATCTG+GGG | 0.665489 | 5.4:-13169490 | MS.gene59435:CDS |
| AGGTAGTGCAAGGTGTACGT+CGG | 0.666824 | 5.4:+13169995 | None:intergenic |
| TGTGTAGTCACACTAGGAGA+CGG | 0.667876 | 5.4:+13170107 | None:intergenic |
| GTTTGGGACAGTGTCTTGGA+CGG | 0.669837 | 5.4:-13170716 | MS.gene59435:CDS |
| TTAGCTGAGAAATGGAAATG+TGG | 0.673734 | 5.4:-13172465 | MS.gene59435:intron |
| TAGAGAAACAACTTACGAGG+TGG | 0.675171 | 5.4:+13169238 | None:intergenic |
| ATGGTCTTAGCAATGCAACA+AGG | 0.681952 | 5.4:-13170247 | MS.gene59435:CDS |
| TCATCTCGTTTAACACACGC+CGG | 0.683606 | 5.4:+13172501 | None:intergenic |
| GGAGGAGAAACACAGTGTCA+CGG | 0.684082 | 5.4:-13169700 | MS.gene59435:CDS |
| TGTGAAATTTCTTGTCATGG+TGG | 0.684535 | 5.4:-13170020 | MS.gene59435:CDS |
| CCGACATTGAAGAGAATCCG+GGG | 0.685264 | 5.4:-13169818 | MS.gene59435:CDS |
| TCCGGTTGTGAAGAAGCCGA+AGG | 0.686799 | 5.4:-13172727 | MS.gene59435:CDS |
| GGGTAAATGTAAATCACCTG+AGG | 0.697059 | 5.4:+13169563 | None:intergenic |
| AGGTAGAGAAACAACTTACG+AGG | 0.715989 | 5.4:+13169235 | None:intergenic |
| ACATGAACAGTACCTTTCGG+CGG | 0.743025 | 5.4:+13172756 | None:intergenic |
| AATCTGTTAAGAGCAACGGA+GGG | 0.752755 | 5.4:-13170136 | MS.gene59435:CDS |
| CAAACTCATCAATTTCCATG+GGG | 0.762481 | 5.4:-13169262 | MS.gene59435:CDS |
| GTGTCGGTGAGTAAGAAACG+CGG | 0.800922 | 5.4:-13172783 | MS.gene59435:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATAAACGATTTTAT+CGG | + | chr5.4:13169566-13169585 | None:intergenic | 10.0% |
| !! | ATATAATTGTATGTAATCAA+TGG | - | chr5.4:13172709-13172728 | MS.gene59435:CDS | 15.0% |
| !! | TATAATTGTATGTAATCAAT+GGG | - | chr5.4:13172710-13172729 | MS.gene59435:CDS | 15.0% |
| !!! | AATGTTATTCTTTCTATTTT+AGG | - | chr5.4:13169589-13169608 | MS.gene59435:CDS | 15.0% |
| !!! | ATGTTATTCTTTCTATTTTA+GGG | - | chr5.4:13169590-13169609 | MS.gene59435:CDS | 15.0% |
| !! | AAAAACGTGAATGAAAAATT+AGG | - | chr5.4:13170465-13170484 | MS.gene59435:CDS | 20.0% |
| !! | AAAACGTGAATGAAAAATTA+GGG | - | chr5.4:13170466-13170485 | MS.gene59435:CDS | 20.0% |
| !! | AATTGAACTTAATTATGAGT+TGG | - | chr5.4:13169773-13169792 | MS.gene59435:CDS | 20.0% |
| !! | CTCTATATTTGAAAGTAAAA+TGG | - | chr5.4:13170084-13170103 | MS.gene59435:CDS | 20.0% |
| !! | TTTATACATGAAAAGCTTAA+TGG | - | chr5.4:13171096-13171115 | MS.gene59435:intron | 20.0% |
| !!! | AACTTATTTTAAATGCGTTT+CGG | + | chr5.4:13169877-13169896 | None:intergenic | 20.0% |
| !!! | AGTTTAAATTTAGATTTGCT+AGG | - | chr5.4:13172787-13172806 | MS.gene59435:CDS | 20.0% |
| !!! | ATGTGATTGTTTTTCTTTTA+TGG | - | chr5.4:13169996-13170015 | MS.gene59435:CDS | 20.0% |
| !!! | ATTAAGCTTTTCATGTATAA+AGG | + | chr5.4:13171097-13171116 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTGAGTGTCTAA+TGG | - | chr5.4:13170792-13170811 | MS.gene59435:CDS | 20.0% |
| !!! | TGTGATTGTTTTTCTTTTAT+GGG | - | chr5.4:13169997-13170016 | MS.gene59435:CDS | 20.0% |
| !!! | TGTTATTCTTTCTATTTTAG+GGG | - | chr5.4:13169591-13169610 | MS.gene59435:CDS | 20.0% |
| !!! | TGTTATTTTTGTGTTTATTG+TGG | - | chr5.4:13169694-13169713 | MS.gene59435:CDS | 20.0% |
| !!! | TTAAGCTTTTCATGTATAAA+GGG | + | chr5.4:13171096-13171115 | None:intergenic | 20.0% |
| !!! | TTTATTTTCCAATGTAACAT+TGG | + | chr5.4:13171854-13171873 | None:intergenic | 20.0% |
| ! | AAAAACAGGAATGAAAATGT+AGG | - | chr5.4:13170419-13170438 | MS.gene59435:CDS | 25.0% |
| ! | AAAACAGGAATGAAAATGTA+GGG | - | chr5.4:13170420-13170439 | MS.gene59435:CDS | 25.0% |
| ! | AAATAGTCCTATAAACAAGA+AGG | - | chr5.4:13171384-13171403 | MS.gene59435:intron | 25.0% |
| ! | AAATGTGAAATTTCTTGTCA+TGG | - | chr5.4:13172111-13172130 | MS.gene59435:intron | 25.0% |
| ! | AATAAAGAAAATAGTCAGGA+TGG | - | chr5.4:13171868-13171887 | MS.gene59435:intron | 25.0% |
| ! | ACTATTTGAATCTACTATAC+AGG | + | chr5.4:13171371-13171390 | None:intergenic | 25.0% |
| ! | ATAAAACATGATCTATGCAA+GGG | + | chr5.4:13170571-13170590 | None:intergenic | 25.0% |
| ! | ATAATCAGCAAACTATATCT+GGG | - | chr5.4:13172643-13172662 | MS.gene59435:intron | 25.0% |
| ! | CGAAATGAATACTAATGAAT+CGG | - | chr5.4:13171510-13171529 | MS.gene59435:intron | 25.0% |
| ! | GATAAAAAATTGGAAGTGAA+TGG | - | chr5.4:13172228-13172247 | MS.gene59435:intron | 25.0% |
| ! | GGAAAATAAAGAAAATAGTC+AGG | - | chr5.4:13171864-13171883 | MS.gene59435:intron | 25.0% |
| ! | TACCAATATCATATAGATCA+AGG | + | chr5.4:13170337-13170356 | None:intergenic | 25.0% |
| ! | TATAAAACATGATCTATGCA+AGG | + | chr5.4:13170572-13170591 | None:intergenic | 25.0% |
| ! | TCATGGGAATGATAAAAAAT+TGG | - | chr5.4:13172218-13172237 | MS.gene59435:intron | 25.0% |
| ! | TCTACTGATGATTAGAATTT+GGG | - | chr5.4:13169846-13169865 | MS.gene59435:CDS | 25.0% |
| ! | TGACAAGAAATTTCACATTT+AGG | + | chr5.4:13172111-13172130 | None:intergenic | 25.0% |
| ! | TTCCTTGATCTATATGATAT+TGG | - | chr5.4:13170332-13170351 | MS.gene59435:CDS | 25.0% |
| ! | TTCTACTGATGATTAGAATT+TGG | - | chr5.4:13169845-13169864 | MS.gene59435:CDS | 25.0% |
| !! | GAATTTAGTGTCTTTGTTTA+TGG | - | chr5.4:13170239-13170258 | MS.gene59435:CDS | 25.0% |
| !! | TATATTTTACACAAGACCAA+CGG | + | chr5.4:13172755-13172774 | None:intergenic | 25.0% |
| !! | TGATTCAGTTTCAAATCTTT+TGG | - | chr5.4:13172398-13172417 | MS.gene59435:intron | 25.0% |
| !!! | AAGTTTTATTTTGTGCAAAG+TGG | - | chr5.4:13169892-13169911 | MS.gene59435:CDS | 25.0% |
| !!! | TTTTTTTTTTTGCATTGCCT+AGG | - | chr5.4:13170833-13170852 | MS.gene59435:CDS | 25.0% |
| AAACATGTGGATAAATGTCT+TGG | - | chr5.4:13170633-13170652 | MS.gene59435:CDS | 30.0% | |
| ACTAAATTCATGCCTAATGA+AGG | + | chr5.4:13170228-13170247 | None:intergenic | 30.0% | |
| ATAAATGTCTTGGATTATGC+AGG | - | chr5.4:13170643-13170662 | MS.gene59435:CDS | 30.0% | |
| ATCTACTATACAGGAATTCT+CGG | + | chr5.4:13171362-13171381 | None:intergenic | 30.0% | |
| ATGGAAATTGTTGAAGATCA+AGG | - | chr5.4:13170258-13170277 | MS.gene59435:CDS | 30.0% | |
| ATTGGAAGTGAATGGAAATT+TGG | - | chr5.4:13172236-13172255 | MS.gene59435:intron | 30.0% | |
| ATTTCCATTTCTCAGCTAAA+CGG | + | chr5.4:13169668-13169687 | None:intergenic | 30.0% | |
| CAAAGATGTACTAATTTGGA+AGG | - | chr5.4:13170515-13170534 | MS.gene59435:CDS | 30.0% | |
| CATAATCAGCAAACTATATC+TGG | - | chr5.4:13172642-13172661 | MS.gene59435:intron | 30.0% | |
| CTAAATTCATGCCTAATGAA+GGG | + | chr5.4:13170227-13170246 | None:intergenic | 30.0% | |
| CTAATCAATCAATTATGTGC+AGG | - | chr5.4:13172823-13172842 | MS.gene59435:CDS | 30.0% | |
| GCTATAACTGATTGTTTACA+AGG | - | chr5.4:13172501-13172520 | MS.gene59435:CDS | 30.0% | |
| GTCATTCAAATTCTCATCAA+AGG | + | chr5.4:13172172-13172191 | None:intergenic | 30.0% | |
| GTGTCAAAGATGTACTAATT+TGG | - | chr5.4:13170511-13170530 | MS.gene59435:CDS | 30.0% | |
| TAATCAGCAAACTATATCTG+GGG | - | chr5.4:13172644-13172663 | MS.gene59435:intron | 30.0% | |
| TACAATAGATTTCTCATGCA+TGG | - | chr5.4:13170590-13170609 | MS.gene59435:CDS | 30.0% | |
| TGATCAGCTTGTCAAAAATA+GGG | + | chr5.4:13170756-13170775 | None:intergenic | 30.0% | |
| TTGAAACTGAATCATCAACT+AGG | + | chr5.4:13172392-13172411 | None:intergenic | 30.0% | |
| TTGGAAGTGAATGGAAATTT+GGG | - | chr5.4:13172237-13172256 | MS.gene59435:intron | 30.0% | |
| ! | ATATTTTACACAAGACCAAC+GGG | + | chr5.4:13172754-13172773 | None:intergenic | 30.0% |
| ! | TTGGTATGTTACTTCATGTT+TGG | - | chr5.4:13170351-13170370 | MS.gene59435:CDS | 30.0% |
| !!! | AAAGTGGTTATTTTGAACGA+AGG | - | chr5.4:13172076-13172095 | MS.gene59435:intron | 30.0% |
| !!! | AAGTGGTTATTTTGAACGAA+GGG | - | chr5.4:13172077-13172096 | MS.gene59435:intron | 30.0% |
| AACTGTGAACAACAGTCTTT+GGG | - | chr5.4:13171826-13171845 | MS.gene59435:intron | 35.0% | |
| AATGAATCGGCAATCAATGA+TGG | - | chr5.4:13171523-13171542 | MS.gene59435:intron | 35.0% | |
| AATTGTTGAAGATCAAGGAG+TGG | - | chr5.4:13170263-13170282 | MS.gene59435:CDS | 35.0% | |
| ACAGATTCATCTGTACCATT+AGG | + | chr5.4:13171985-13172004 | None:intergenic | 35.0% | |
| ACCAAACTCATCAATTTCCA+TGG | - | chr5.4:13172870-13172889 | MS.gene59435:CDS | 35.0% | |
| AGACCATTACCTTAATTCCT+TGG | + | chr5.4:13171030-13171049 | None:intergenic | 35.0% | |
| AGATTCATCTGTACCATTAG+GGG | + | chr5.4:13171983-13172002 | None:intergenic | 35.0% | |
| CAAACTCATCAATTTCCATG+GGG | - | chr5.4:13172872-13172891 | MS.gene59435:CDS | 35.0% | |
| CAAGGAAAGAGAGAGAATTA+GGG | + | chr5.4:13170319-13170338 | None:intergenic | 35.0% | |
| CACTTGTTCTATGTGATCAT+CGG | - | chr5.4:13169469-13169488 | MS.gene59435:CDS | 35.0% | |
| CAGATTCATCTGTACCATTA+GGG | + | chr5.4:13171984-13172003 | None:intergenic | 35.0% | |
| CATACATCTTCTTCATCCTT+CGG | + | chr5.4:13169426-13169445 | None:intergenic | 35.0% | |
| CATCATCTTAAAGTTGACAC+TGG | - | chr5.4:13171328-13171347 | MS.gene59435:intron | 35.0% | |
| CCAAACTCATCAATTTCCAT+GGG | - | chr5.4:13172871-13172890 | MS.gene59435:CDS | 35.0% | |
| CCTATAAACAAGAAGGCTAA+GGG | - | chr5.4:13171391-13171410 | MS.gene59435:intron | 35.0% | |
| CGCACTAAAAAAATAGCACA+AGG | + | chr5.4:13171144-13171163 | None:intergenic | 35.0% | |
| GACCATTACCTTAATTCCTT+GGG | + | chr5.4:13171029-13171048 | None:intergenic | 35.0% | |
| GATATTGATGTGTTCACTGA+TGG | - | chr5.4:13172477-13172496 | MS.gene59435:CDS | 35.0% | |
| GATGAATCTGTTAAGAGCAA+CGG | - | chr5.4:13171994-13172013 | MS.gene59435:intron | 35.0% | |
| GTATGCTTCATTTGCTTTGA+TGG | - | chr5.4:13169441-13169460 | MS.gene59435:intron | 35.0% | |
| GTGATCAGCTTGTCAAAAAT+AGG | + | chr5.4:13170757-13170776 | None:intergenic | 35.0% | |
| TCAAGGAAAGAGAGAGAATT+AGG | + | chr5.4:13170320-13170339 | None:intergenic | 35.0% | |
| TCCTATAAACAAGAAGGCTA+AGG | - | chr5.4:13171390-13171409 | MS.gene59435:intron | 35.0% | |
| TGAACATGAACAGTACCTTT+CGG | + | chr5.4:13169384-13169403 | None:intergenic | 35.0% | |
| TGCTTGTGTATTTGATGTCT+GGG | - | chr5.4:13170190-13170209 | MS.gene59435:CDS | 35.0% | |
| TGTGAAATTTCTTGTCATGG+TGG | - | chr5.4:13172114-13172133 | MS.gene59435:intron | 35.0% | |
| TTAGCTGAGAAATGGAAATG+TGG | - | chr5.4:13169669-13169688 | MS.gene59435:CDS | 35.0% | |
| TTCAAAAACTCCTGAAGTTG+AGG | - | chr5.4:13172674-13172693 | MS.gene59435:CDS | 35.0% | |
| TTGCTTGTGTATTTGATGTC+TGG | - | chr5.4:13170189-13170208 | MS.gene59435:CDS | 35.0% | |
| ! | AAATCTTTTGGATGCAGTAG+CGG | - | chr5.4:13172410-13172429 | MS.gene59435:intron | 35.0% |
| ! | AATGGAAATTTGGGTTCCAA+TGG | - | chr5.4:13172246-13172265 | MS.gene59435:intron | 35.0% |
| ! | AGCTTTTCATGTATAAAGGG+AGG | + | chr5.4:13171093-13171112 | None:intergenic | 35.0% |
| ! | ATGGAAATTTGGGTTCCAAT+GGG | - | chr5.4:13172247-13172266 | MS.gene59435:intron | 35.0% |
| ! | ATGTTACTTCATGTTTGGTG+AGG | - | chr5.4:13170356-13170375 | MS.gene59435:CDS | 35.0% |
| ! | CATTCACGTTTTTGTGATTC+TGG | + | chr5.4:13170458-13170477 | None:intergenic | 35.0% |
| ! | GCTTTTCATGTATAAAGGGA+GGG | + | chr5.4:13171092-13171111 | None:intergenic | 35.0% |
| ! | TGTATTCACATTTAGCTCAC+AGG | + | chr5.4:13171476-13171495 | None:intergenic | 35.0% |
| ! | TGTTACTTCATGTTTGGTGA+GGG | - | chr5.4:13170357-13170376 | MS.gene59435:CDS | 35.0% |
| ! | TTTTCCGTTTAGCTGAGAAA+TGG | - | chr5.4:13169661-13169680 | MS.gene59435:CDS | 35.0% |
| !! | AGTATCTTTTCAAGGTGTAC+TGG | - | chr5.4:13171194-13171213 | MS.gene59435:CDS | 35.0% |
| !! | ATACTACCAGATTTTGATGC+AGG | - | chr5.4:13172528-13172547 | MS.gene59435:intron | 35.0% |
| !! | ATTTTGATGATAGAAGCAGC+TGG | - | chr5.4:13171170-13171189 | MS.gene59435:CDS | 35.0% |
| !! | GTGTTTTTGCTTGAAACATG+TGG | - | chr5.4:13170620-13170639 | MS.gene59435:CDS | 35.0% |
| !! | TTTTGATGATAGAAGCAGCT+GGG | - | chr5.4:13171171-13171190 | MS.gene59435:CDS | 35.0% |
| !!! | GCTATTTTTTTAGTGCGAAG+TGG | - | chr5.4:13171147-13171166 | MS.gene59435:CDS | 35.0% |
| !!! | TTTTTTTGCATTGCCTAGGT+TGG | - | chr5.4:13170837-13170856 | MS.gene59435:CDS | 35.0% |
| AATCTGTTAAGAGCAACGGA+GGG | - | chr5.4:13171998-13172017 | MS.gene59435:intron | 40.0% | |
| AATGGTTCGTGTCTTTGTTC+TGG | - | chr5.4:13170102-13170121 | MS.gene59435:CDS | 40.0% | |
| AGAAGGCTAAGGGAAATGTT+TGG | - | chr5.4:13171401-13171420 | MS.gene59435:intron | 40.0% | |
| AGAGCAAACAAAGGTTTGTG+CGG | - | chr5.4:13170965-13170984 | MS.gene59435:CDS | 40.0% | |
| AGGTAGAGAAACAACTTACG+AGG | + | chr5.4:13172902-13172921 | None:intergenic | 40.0% | |
| ATCCGACATTGAAGAGAATC+CGG | - | chr5.4:13172314-13172333 | MS.gene59435:intron | 40.0% | |
| ATGGTTCGTGTCTTTGTTCT+GGG | - | chr5.4:13170103-13170122 | MS.gene59435:CDS | 40.0% | |
| ATTCATCTGTACCATTAGGG+GGG | + | chr5.4:13171981-13172000 | None:intergenic | 40.0% | |
| CAACTGTGAACAACAGTCTT+TGG | - | chr5.4:13171825-13171844 | MS.gene59435:intron | 40.0% | |
| CACAGCAACGACATACTAAA+AGG | + | chr5.4:13171676-13171695 | None:intergenic | 40.0% | |
| CACATCAATATCCCACTCTT+CGG | + | chr5.4:13172469-13172488 | None:intergenic | 40.0% | |
| CAGATGGGAATATCAGTGAT+GGG | - | chr5.4:13172052-13172071 | MS.gene59435:intron | 40.0% | |
| CAGCTTGTCAAAAATAGGGA+AGG | + | chr5.4:13170752-13170771 | None:intergenic | 40.0% | |
| CCCATGGAAATTGATGAGTT+TGG | + | chr5.4:13172874-13172893 | None:intergenic | 40.0% | |
| CCTTTACCTGCATCAAAATC+TGG | + | chr5.4:13172537-13172556 | None:intergenic | 40.0% | |
| CGAGCTAAAAATCCTTGGAA+AGG | - | chr5.4:13171262-13171281 | MS.gene59435:CDS | 40.0% | |
| CTTGTGTATTTGATGTCTGG+GGG | - | chr5.4:13170192-13170211 | MS.gene59435:CDS | 40.0% | |
| GAAGGCTAAGGGAAATGTTT+GGG | - | chr5.4:13171402-13171421 | MS.gene59435:intron | 40.0% | |
| GATCCCAAATTCCCAATACT+TGG | + | chr5.4:13170388-13170407 | None:intergenic | 40.0% | |
| GATTCATCTGTACCATTAGG+GGG | + | chr5.4:13171982-13172001 | None:intergenic | 40.0% | |
| GCTTGTGTATTTGATGTCTG+GGG | - | chr5.4:13170191-13170210 | MS.gene59435:CDS | 40.0% | |
| GGGTAAATGTAAATCACCTG+AGG | + | chr5.4:13172574-13172593 | None:intergenic | 40.0% | |
| GTTAGTGTCAGAGCAAACAA+AGG | - | chr5.4:13170956-13170975 | MS.gene59435:CDS | 40.0% | |
| TACTGTTCATGTTCATGCTC+CGG | - | chr5.4:13169389-13169408 | MS.gene59435:intron | 40.0% | |
| TAGAGAAACAACTTACGAGG+TGG | + | chr5.4:13172899-13172918 | None:intergenic | 40.0% | |
| TCACTTTGCCCACTATTACT+CGG | + | chr5.4:13172285-13172304 | None:intergenic | 40.0% | |
| TCCAGATCTCAGAATATGGA+GGG | - | chr5.4:13171723-13171742 | MS.gene59435:intron | 40.0% | |
| TCCTTCGAGCTAAAAATCCT+TGG | - | chr5.4:13171257-13171276 | MS.gene59435:CDS | 40.0% | |
| TCTCTCCAGATCTCAGAATA+TGG | - | chr5.4:13171719-13171738 | MS.gene59435:intron | 40.0% | |
| TGACAAACCTTCTGATGAAG+TGG | - | chr5.4:13172188-13172207 | MS.gene59435:intron | 40.0% | |
| TGCCCAAGGAATTAAGGTAA+TGG | - | chr5.4:13171024-13171043 | MS.gene59435:intron | 40.0% | |
| TGCTTCATTTGCTTTGATGG+TGG | - | chr5.4:13169444-13169463 | MS.gene59435:intron | 40.0% | |
| TGTCCATATTCCTTGTGCAA+GGG | - | chr5.4:13170908-13170927 | MS.gene59435:CDS | 40.0% | |
| TTCATGTATAAAGGGAGGGA+GGG | + | chr5.4:13171088-13171107 | None:intergenic | 40.0% | |
| TTCTCATCAAAGGCAGTTGA+AGG | + | chr5.4:13172162-13172181 | None:intergenic | 40.0% | |
| TTGTGTATTTGATGTCTGGG+GGG | - | chr5.4:13170193-13170212 | MS.gene59435:CDS | 40.0% | |
| TTTCATGTATAAAGGGAGGG+AGG | + | chr5.4:13171089-13171108 | None:intergenic | 40.0% | |
| TTTGGGAGCCAATGTTACAT+TGG | - | chr5.4:13171843-13171862 | MS.gene59435:intron | 40.0% | |
| ! | AAATGTTTGGGACAGTGTCT+TGG | - | chr5.4:13171414-13171433 | MS.gene59435:intron | 40.0% |
| ! | ATGGTCTTAGCAATGCAACA+AGG | - | chr5.4:13171887-13171906 | MS.gene59435:intron | 40.0% |
| ! | ATTGGGAATTTGGGATCCTT+GGG | - | chr5.4:13170391-13170410 | MS.gene59435:CDS | 40.0% |
| ! | ATTGTTGCTGGTTGAGAAGA+TGG | - | chr5.4:13170146-13170165 | MS.gene59435:CDS | 40.0% |
| ! | ATTTTACGCACCTCAACTTC+AGG | + | chr5.4:13172687-13172706 | None:intergenic | 40.0% |
| ! | CCCTTAGCCTTCTTGTTTAT+AGG | + | chr5.4:13171394-13171413 | None:intergenic | 40.0% |
| ! | CTTAAAGTTGACACTGGTTG+TGG | - | chr5.4:13171334-13171353 | MS.gene59435:intron | 40.0% |
| ! | GAGCGGCAATGATACATTTT+GGG | + | chr5.4:13171806-13171825 | None:intergenic | 40.0% |
| ! | TATTGGGAATTTGGGATCCT+TGG | - | chr5.4:13170390-13170409 | MS.gene59435:CDS | 40.0% |
| ! | TGAGCGGCAATGATACATTT+TGG | + | chr5.4:13171807-13171826 | None:intergenic | 40.0% |
| ! | TTTAAGATGATGACGCTTCC+GGG | + | chr5.4:13171320-13171339 | None:intergenic | 40.0% |
| ! | TTTGGTTCCAGCAAATACCT+GGG | + | chr5.4:13172856-13172875 | None:intergenic | 40.0% |
| ! | TTTTGTACATCCCTTGCACA+AGG | + | chr5.4:13170921-13170940 | None:intergenic | 40.0% |
| !! | AATATCAGTGATGGGCAAAG+TGG | - | chr5.4:13172060-13172079 | MS.gene59435:intron | 40.0% |
| !! | ATTTGCTACAGTGGATTGAG+AGG | + | chr5.4:13172595-13172614 | None:intergenic | 40.0% |
| !! | CCAGATTTTGATGCAGGTAA+AGG | - | chr5.4:13172534-13172553 | MS.gene59435:intron | 40.0% |
| !! | CTATTTTAGGGGTTGTCCTA+AGG | - | chr5.4:13169602-13169621 | MS.gene59435:CDS | 40.0% |
| !! | CTTTAAGATGATGACGCTTC+CGG | + | chr5.4:13171321-13171340 | None:intergenic | 40.0% |
| !! | GTGTACTGGTTGTACTTGAA+AGG | - | chr5.4:13171208-13171227 | MS.gene59435:CDS | 40.0% |
| !! | TTTGCTACAGTGGATTGAGA+GGG | + | chr5.4:13172594-13172613 | None:intergenic | 40.0% |
| !!! | TCCAAGGATTTTTAGCTCGA+AGG | + | chr5.4:13171261-13171280 | None:intergenic | 40.0% |
| ACAGCCAGTTTGGCATTATC+AGG | - | chr5.4:13171627-13171646 | MS.gene59435:intron | 45.0% | |
| ACATGAACAGTACCTTTCGG+CGG | + | chr5.4:13169381-13169400 | None:intergenic | 45.0% | |
| AGTGTGACTACACAAGCAGA+TGG | - | chr5.4:13172036-13172055 | MS.gene59435:intron | 45.0% | |
| ATCAATATCCCACTCTTCGG+CGG | + | chr5.4:13172466-13172485 | None:intergenic | 45.0% | |
| CAAACCTTCTGATGAAGTGG+TGG | - | chr5.4:13172191-13172210 | MS.gene59435:intron | 45.0% | |
| CATCCCTTGCACAAGGAATA+TGG | + | chr5.4:13170914-13170933 | None:intergenic | 45.0% | |
| CATCGTTGCTTCACTCTACA+GGG | - | chr5.4:13171599-13171618 | MS.gene59435:intron | 45.0% | |
| CCAAATTCCCAATACTTGGC+CGG | + | chr5.4:13170384-13170403 | None:intergenic | 45.0% | |
| CCTGAACATACTCCGATGAT+CGG | - | chr5.4:13169306-13169325 | MS.gene59435:intron | 45.0% | |
| CTCCAGATCTCAGAATATGG+AGG | - | chr5.4:13171722-13171741 | MS.gene59435:intron | 45.0% | |
| CTGTCCATATTCCTTGTGCA+AGG | - | chr5.4:13170907-13170926 | MS.gene59435:CDS | 45.0% | |
| CTTGCACAAGGAATATGGAC+AGG | + | chr5.4:13170909-13170928 | None:intergenic | 45.0% | |
| GAACAGTGCCCAAGGAATTA+AGG | - | chr5.4:13171018-13171037 | MS.gene59435:intron | 45.0% | |
| GAATCTGTTAAGAGCAACGG+AGG | - | chr5.4:13171997-13172016 | MS.gene59435:intron | 45.0% | |
| GACAGGTATAGCACATGTAG+TGG | + | chr5.4:13170892-13170911 | None:intergenic | 45.0% | |
| GACTGTTGTTCACAGTTGAG+CGG | + | chr5.4:13171823-13171842 | None:intergenic | 45.0% | |
| GCAGATGGGAATATCAGTGA+TGG | - | chr5.4:13172051-13172070 | MS.gene59435:intron | 45.0% | |
| GGAATTGGAGGTGGAATTAC+CGG | + | chr5.4:13169261-13169280 | None:intergenic | 45.0% | |
| GGCATTATCAGGATCCAACT+GGG | - | chr5.4:13171638-13171657 | MS.gene59435:intron | 45.0% | |
| GGTAATTCCACCTCCAATTC+CGG | - | chr5.4:13169260-13169279 | MS.gene59435:CDS | 45.0% | |
| GTGTGACTACACAAGCAGAT+GGG | - | chr5.4:13172037-13172056 | MS.gene59435:intron | 45.0% | |
| GTTTCAAGACTAGGAGAGTC+TGG | - | chr5.4:13171559-13171578 | MS.gene59435:intron | 45.0% | |
| TCAACCAGCAACAATTTCGC+CGG | + | chr5.4:13170141-13170160 | None:intergenic | 45.0% | |
| TCATCGTTGCTTCACTCTAC+AGG | - | chr5.4:13171598-13171617 | MS.gene59435:intron | 45.0% | |
| TCATCTCGTTTAACACACGC+CGG | + | chr5.4:13169636-13169655 | None:intergenic | 45.0% | |
| TCATGTATAAAGGGAGGGAG+GGG | + | chr5.4:13171087-13171106 | None:intergenic | 45.0% | |
| TCCGACATTGAAGAGAATCC+GGG | - | chr5.4:13172315-13172334 | MS.gene59435:intron | 45.0% | |
| TCTGCTTGTGTAGTCACACT+AGG | + | chr5.4:13172036-13172055 | None:intergenic | 45.0% | |
| TGGCATCTATGTAGCGATTG+TGG | - | chr5.4:13170857-13170876 | MS.gene59435:CDS | 45.0% | |
| TGGCATTATCAGGATCCAAC+TGG | - | chr5.4:13171637-13171656 | MS.gene59435:intron | 45.0% | |
| TGGTTCGTGTCTTTGTTCTG+GGG | - | chr5.4:13170104-13170123 | MS.gene59435:CDS | 45.0% | |
| TGTGTAGTCACACTAGGAGA+CGG | + | chr5.4:13172030-13172049 | None:intergenic | 45.0% | |
| TTATCAGGATCCAACTGGGA+AGG | - | chr5.4:13171642-13171661 | MS.gene59435:intron | 45.0% | |
| TTCATCTGTACCATTAGGGG+GGG | + | chr5.4:13171980-13171999 | None:intergenic | 45.0% | |
| TTCCAGCAAATACCTGGGAA+AGG | + | chr5.4:13172851-13172870 | None:intergenic | 45.0% | |
| TTCTGGTCAGAACTGGATGA+TGG | - | chr5.4:13172344-13172363 | MS.gene59435:intron | 45.0% | |
| TTGTCCTAAGGCGTATCATC+CGG | - | chr5.4:13169614-13169633 | MS.gene59435:CDS | 45.0% | |
| TTTACACAAGACCAACGGGT+GGG | + | chr5.4:13172750-13172769 | None:intergenic | 45.0% | |
| ! | ATCCTTGGGGGTACAAAAAC+AGG | - | chr5.4:13170405-13170424 | MS.gene59435:CDS | 45.0% |
| ! | ATGAAGTGGTGGAAGGTCAT+GGG | - | chr5.4:13172202-13172221 | MS.gene59435:intron | 45.0% |
| ! | CACATTTAGCTCACAGGTAG+TGG | + | chr5.4:13171470-13171489 | None:intergenic | 45.0% |
| ! | GGAATTACCGGTTGCTGAAT+CGG | + | chr5.4:13169249-13169268 | None:intergenic | 45.0% |
| ! | GGATCCTGATAATGCCAAAC+TGG | + | chr5.4:13171634-13171653 | None:intergenic | 45.0% |
| ! | GTTTGGTTCCAGCAAATACC+TGG | + | chr5.4:13172857-13172876 | None:intergenic | 45.0% |
| ! | TCGTTGCTGTGCAAGTTGAA+AGG | - | chr5.4:13171685-13171704 | MS.gene59435:intron | 45.0% |
| ! | TGCACATCTGCTTGCTGAAA+CGG | + | chr5.4:13172624-13172643 | None:intergenic | 45.0% |
| ! | TTAAGATGATGACGCTTCCG+GGG | + | chr5.4:13171319-13171338 | None:intergenic | 45.0% |
| ! | TTGGGAATTTGGGATCCTTG+GGG | - | chr5.4:13170392-13170411 | MS.gene59435:CDS | 45.0% |
| ! | TTTTACACAAGACCAACGGG+TGG | + | chr5.4:13172751-13172770 | None:intergenic | 45.0% |
| !! | ACCCTCCATATTCTGAGATC+TGG | + | chr5.4:13171727-13171746 | None:intergenic | 45.0% |
| !! | ATCAATGATGGCACTGATGC+AGG | - | chr5.4:13171535-13171554 | MS.gene59435:intron | 45.0% |
| !! | CGGCCAAGTATTGGGAATTT+GGG | - | chr5.4:13170382-13170401 | MS.gene59435:CDS | 45.0% |
| !! | TCAATGATGGCACTGATGCA+GGG | - | chr5.4:13171536-13171555 | MS.gene59435:intron | 45.0% |
| !!! | CAGCTGGGAGTATCTTTTCA+AGG | - | chr5.4:13171186-13171205 | MS.gene59435:CDS | 45.0% |
| !!! | TTCCTGTTTTTGTACCCCCA+AGG | + | chr5.4:13170410-13170429 | None:intergenic | 45.0% |
| AAGGAGTGGCGCTTGTAACT+GGG | - | chr5.4:13170277-13170296 | MS.gene59435:CDS | 50.0% | |
| AGGACCCGTAAATTCTCCTC+CGG | + | chr5.4:13169289-13169308 | None:intergenic | 50.0% | |
| AGGCAGTTGAAGGTAGTGCA+AGG | + | chr5.4:13172152-13172171 | None:intergenic | 50.0% | |
| AGGTAGTGCAAGGTGTACGT+CGG | + | chr5.4:13172142-13172161 | None:intergenic | 50.0% | |
| CAAGCAGAGCGAGGAAGAAA+AGG | - | chr5.4:13171939-13171958 | MS.gene59435:intron | 50.0% | |
| CAGAGCGAGGAAGAAAAGGT+GGG | - | chr5.4:13171943-13171962 | MS.gene59435:intron | 50.0% | |
| CCCCGGATTCTCTTCAATGT+CGG | + | chr5.4:13172319-13172338 | None:intergenic | 50.0% | |
| CCGACATTGAAGAGAATCCG+GGG | - | chr5.4:13172316-13172335 | MS.gene59435:intron | 50.0% | |
| CCGATCATCGGAGTATGTTC+AGG | + | chr5.4:13169309-13169328 | None:intergenic | 50.0% | |
| CCTTCCACCACTTCATCAGA+AGG | + | chr5.4:13172198-13172217 | None:intergenic | 50.0% | |
| CGCTACATAGATGCCAACCT+AGG | + | chr5.4:13170853-13170872 | None:intergenic | 50.0% | |
| CTCCTTTCCCAGGTATTTGC+TGG | - | chr5.4:13172846-13172865 | MS.gene59435:CDS | 50.0% | |
| CTGAGGGTCCGAGTAATAGT+GGG | - | chr5.4:13172274-13172293 | MS.gene59435:intron | 50.0% | |
| GATACTTGTACCCCCCCTAA+TGG | - | chr5.4:13171967-13171986 | MS.gene59435:intron | 50.0% | |
| GATCCAACTGGGAAGGTTCA+TGG | - | chr5.4:13171649-13171668 | MS.gene59435:intron | 50.0% | |
| GATGCAGGGGTTTCAAGACT+AGG | - | chr5.4:13171550-13171569 | MS.gene59435:intron | 50.0% | |
| GGAGGAGAAACACAGTGTCA+CGG | - | chr5.4:13172434-13172453 | MS.gene59435:intron | 50.0% | |
| GGCAATCTTCTGGTCAGAAC+TGG | - | chr5.4:13172337-13172356 | MS.gene59435:intron | 50.0% | |
| GGTCACCGGAGGAGAATTTA+CGG | - | chr5.4:13169281-13169300 | MS.gene59435:CDS | 50.0% | |
| GGTTCCAATGGGTCTTCTGA+GGG | - | chr5.4:13172258-13172277 | MS.gene59435:intron | 50.0% | |
| GGTTCGTGTCTTTGTTCTGG+GGG | - | chr5.4:13170105-13170124 | MS.gene59435:CDS | 50.0% | |
| GTAAATTCTCCTCCGGTGAC+CGG | + | chr5.4:13169282-13169301 | None:intergenic | 50.0% | |
| GTCACCGGAGGAGAATTTAC+GGG | - | chr5.4:13169282-13169301 | MS.gene59435:CDS | 50.0% | |
| GTTGCAAGGTTCAAACTCCC+CGG | - | chr5.4:13171299-13171318 | MS.gene59435:intron | 50.0% | |
| GTTGCTTCACTCTACAGGGA+TGG | - | chr5.4:13171603-13171622 | MS.gene59435:intron | 50.0% | |
| TATTTGATGTCTGGGGGGCT+TGG | - | chr5.4:13170198-13170217 | MS.gene59435:CDS | 50.0% | |
| TCCTTCGGCTTCTTCACAAC+CGG | + | chr5.4:13169411-13169430 | None:intergenic | 50.0% | |
| TCTGAGGGTCCGAGTAATAG+TGG | - | chr5.4:13172273-13172292 | MS.gene59435:intron | 50.0% | |
| TGAACCGGCGAAATTGTTGC+TGG | - | chr5.4:13170134-13170153 | MS.gene59435:CDS | 50.0% | |
| TTCTGACCAGAAGATTGCCC+CGG | + | chr5.4:13172336-13172355 | None:intergenic | 50.0% | |
| ! | ATTACCGGTTGCTGAATCGG+TGG | + | chr5.4:13169246-13169265 | None:intergenic | 50.0% |
| ! | CCTTCTGATGAAGTGGTGGA+AGG | - | chr5.4:13172195-13172214 | MS.gene59435:intron | 50.0% |
| ! | CGGTTGCTCATTTGCTACAG+TGG | + | chr5.4:13172604-13172623 | None:intergenic | 50.0% |
| ! | CTTCATGTTTGGTGAGGGTC+CGG | - | chr5.4:13170362-13170381 | MS.gene59435:CDS | 50.0% |
| ! | GATGAAGTGGTGGAAGGTCA+TGG | - | chr5.4:13172201-13172220 | MS.gene59435:intron | 50.0% |
| ! | GGGCTTGGTTTCCCTTCATT+AGG | - | chr5.4:13170213-13170232 | MS.gene59435:CDS | 50.0% |
| ! | GTGTCGGTGAGTAAGAAACG+CGG | - | chr5.4:13169351-13169370 | MS.gene59435:intron | 50.0% |
| ! | GTTTGGGACAGTGTCTTGGA+CGG | - | chr5.4:13171418-13171437 | MS.gene59435:intron | 50.0% |
| ! | TCTTTTGGATGCAGTAGCGG+CGG | - | chr5.4:13172413-13172432 | MS.gene59435:intron | 50.0% |
| ! | TGGATGATGGCAGCACTCTT+TGG | - | chr5.4:13172357-13172376 | MS.gene59435:intron | 50.0% |
| ! | TGGGAATTTGGGATCCTTGG+GGG | - | chr5.4:13170393-13170412 | MS.gene59435:CDS | 50.0% |
| ! | TTACCGGTTGCTGAATCGGT+GGG | + | chr5.4:13169245-13169264 | None:intergenic | 50.0% |
| !! | CAATGATGGCACTGATGCAG+GGG | - | chr5.4:13171537-13171556 | MS.gene59435:intron | 50.0% |
| !! | CCGGCCAAGTATTGGGAATT+TGG | - | chr5.4:13170381-13170400 | MS.gene59435:CDS | 50.0% |
| !! | GCAGCGTTGATTCCGATCAT+CGG | + | chr5.4:13169321-13169340 | None:intergenic | 50.0% |
| AACTTACGAGGTGGACCCCA+TGG | + | chr5.4:13172890-13172909 | None:intergenic | 55.0% | |
| AGGAGTGGCGCTTGTAACTG+GGG | - | chr5.4:13170278-13170297 | MS.gene59435:CDS | 55.0% | |
| ATATCCCACTCTTCGGCGGA+AGG | + | chr5.4:13172462-13172481 | None:intergenic | 55.0% | |
| CAAGGAGTGGCGCTTGTAAC+TGG | - | chr5.4:13170276-13170295 | MS.gene59435:CDS | 55.0% | |
| CAGGGATGGAACAGCCAGTT+TGG | - | chr5.4:13171617-13171636 | MS.gene59435:intron | 55.0% | |
| CCAGATTGTCAAGCAGAGCG+AGG | - | chr5.4:13171930-13171949 | MS.gene59435:intron | 55.0% | |
| CCTCGCTCTGCTTGACAATC+TGG | + | chr5.4:13171933-13171952 | None:intergenic | 55.0% | |
| CTGAAAACCATCCCACCCGT+TGG | - | chr5.4:13172736-13172755 | MS.gene59435:CDS | 55.0% | |
| CTGATCGAGAACAGTGCCCA+AGG | - | chr5.4:13171010-13171029 | MS.gene59435:intron | 55.0% | |
| GACAGTGTCTTGGACGGTGT+TGG | - | chr5.4:13171424-13171443 | MS.gene59435:intron | 55.0% | |
| GAGAATCCGGGGCAATCTTC+TGG | - | chr5.4:13172327-13172346 | MS.gene59435:intron | 55.0% | |
| GCACGAACAGCACCTTTCCA+AGG | + | chr5.4:13171277-13171296 | None:intergenic | 55.0% | |
| GCAGAGCGAGGAAGAAAAGG+TGG | - | chr5.4:13171942-13171961 | MS.gene59435:intron | 55.0% | |
| GGAATCAACGCTGCTGATGC+TGG | - | chr5.4:13169327-13169346 | MS.gene59435:intron | 55.0% | |
| GGACCATGAACCTTCCCAGT+TGG | + | chr5.4:13171655-13171674 | None:intergenic | 55.0% | |
| GGGTTCCAATGGGTCTTCTG+AGG | - | chr5.4:13172257-13172276 | MS.gene59435:intron | 55.0% | |
| GGTAGTGCAAGGTGTACGTC+GGG | + | chr5.4:13172141-13172160 | None:intergenic | 55.0% | |
| GTTTGTGCGGAGCATGCTTG+AGG | - | chr5.4:13170978-13170997 | MS.gene59435:intron | 55.0% | |
| TATGTGCAGGCTCCTTTCCC+AGG | - | chr5.4:13172836-13172855 | MS.gene59435:CDS | 55.0% | |
| TCCGGTTGTGAAGAAGCCGA+AGG | - | chr5.4:13169407-13169426 | MS.gene59435:intron | 55.0% | |
| TGAGGGTCCGGCCAAGTATT+GGG | - | chr5.4:13170374-13170393 | MS.gene59435:CDS | 55.0% | |
| TGCTGTTCGTGCGAGTTGCA+AGG | - | chr5.4:13171285-13171304 | MS.gene59435:intron | 55.0% | |
| ! | AGTGTCTTGGACGGTGTTGG+AGG | - | chr5.4:13171427-13171446 | MS.gene59435:intron | 55.0% |
| ! | TTCTGGGGGCTGAACTGAAC+CGG | - | chr5.4:13170119-13170138 | MS.gene59435:CDS | 55.0% |
| CACAAGACCAACGGGTGGGA+TGG | + | chr5.4:13172746-13172765 | None:intergenic | 60.0% | |
| CACGCCGGATGATACGCCTT+AGG | + | chr5.4:13169621-13169640 | None:intergenic | 60.0% | |
| CCACCTCCAATTCCGGTCAC+CGG | - | chr5.4:13169267-13169286 | MS.gene59435:CDS | 60.0% | |
| CGCTTGTAACTGGGGGAGTG+GGG | - | chr5.4:13170286-13170305 | MS.gene59435:CDS | 60.0% | |
| CGGACCCTCAGAAGACCCAT+TGG | + | chr5.4:13172265-13172284 | None:intergenic | 60.0% | |
| GCGCTTGTAACTGGGGGAGT+GGG | - | chr5.4:13170285-13170304 | MS.gene59435:CDS | 60.0% | |
| GCTTGTAACTGGGGGAGTGG+GGG | - | chr5.4:13170287-13170306 | MS.gene59435:CDS | 60.0% | |
| GGAACCTTCCGCCGAAGAGT+GGG | - | chr5.4:13172455-13172474 | MS.gene59435:intron | 60.0% | |
| GGAGTGGCGCTTGTAACTGG+GGG | - | chr5.4:13170279-13170298 | MS.gene59435:CDS | 60.0% | |
| GTGAGGGTCCGGCCAAGTAT+TGG | - | chr5.4:13170373-13170392 | MS.gene59435:CDS | 60.0% | |
| TCTCCTCCGGTGACCGGAAT+TGG | + | chr5.4:13169276-13169295 | None:intergenic | 60.0% | |
| TTTGGATGCAGTAGCGGCGG+AGG | - | chr5.4:13172416-13172435 | MS.gene59435:intron | 60.0% | |
| ! | GGTGATGCTCTGAGCTCCTC+AGG | - | chr5.4:13172555-13172574 | MS.gene59435:intron | 60.0% |
| !! | CCACCCACCGATTCAGCAAC+CGG | - | chr5.4:13169239-13169258 | MS.gene59435:CDS | 60.0% |
| AAACGCGGTCGTCCGCCGAA+AGG | - | chr5.4:13169366-13169385 | MS.gene59435:intron | 65.0% | |
| CCGGTGACCGGAATTGGAGG+TGG | + | chr5.4:13169270-13169289 | None:intergenic | 65.0% | |
| CCGGTTGCTGAATCGGTGGG+TGG | + | chr5.4:13169242-13169261 | None:intergenic | 65.0% | |
| CCTCCAATTCCGGTCACCGG+AGG | - | chr5.4:13169270-13169289 | MS.gene59435:CDS | 65.0% | |
| CCTCCGGTGACCGGAATTGG+AGG | + | chr5.4:13169273-13169292 | None:intergenic | 65.0% | |
| CGCTGCTGATGCTGGCGTGT+CGG | - | chr5.4:13169335-13169354 | MS.gene59435:intron | 65.0% | |
| CGGAACCTTCCGCCGAAGAG+TGG | - | chr5.4:13172454-13172473 | MS.gene59435:intron | 65.0% | |
| GGCGCTTGTAACTGGGGGAG+TGG | - | chr5.4:13170284-13170303 | MS.gene59435:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 13169225 | 13172931 | 13169225 | ID=MS.gene59435 |
| chr5.4 | mRNA | 13169225 | 13172931 | 13169225 | ID=MS.gene59435.t1;Parent=MS.gene59435 |
| chr5.4 | exon | 13172666 | 13172931 | 13172666 | ID=MS.gene59435.t1.exon1;Parent=MS.gene59435.t1 |
| chr5.4 | CDS | 13172666 | 13172931 | 13172666 | ID=cds.MS.gene59435.t1;Parent=MS.gene59435.t1 |
| chr5.4 | exon | 13172466 | 13172545 | 13172466 | ID=MS.gene59435.t1.exon2;Parent=MS.gene59435.t1 |
| chr5.4 | CDS | 13172466 | 13172545 | 13172466 | ID=cds.MS.gene59435.t1;Parent=MS.gene59435.t1 |
| chr5.4 | exon | 13171117 | 13171301 | 13171117 | ID=MS.gene59435.t1.exon3;Parent=MS.gene59435.t1 |
| chr5.4 | CDS | 13171117 | 13171301 | 13171117 | ID=cds.MS.gene59435.t1;Parent=MS.gene59435.t1 |
| chr5.4 | exon | 13169461 | 13170996 | 13169461 | ID=MS.gene59435.t1.exon4;Parent=MS.gene59435.t1 |
| chr5.4 | CDS | 13169461 | 13170996 | 13169461 | ID=cds.MS.gene59435.t1;Parent=MS.gene59435.t1 |
| chr5.4 | exon | 13169225 | 13169311 | 13169225 | ID=MS.gene59435.t1.exon5;Parent=MS.gene59435.t1 |
| chr5.4 | CDS | 13169225 | 13169311 | 13169225 | ID=cds.MS.gene59435.t1;Parent=MS.gene59435.t1 |
| Gene Sequence |
| Protein sequence |
