Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60694.t1 | XP_003592082.1 | 98.6 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 6.50E-250 | 872.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60694.t1 | Q6ICX4 | 82.2 | 444 | 66 | 2 | 1 | 443 | 1 | 432 | 8.2e-209 | 727.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60694.t1 | G7IBX9 | 98.6 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 4.7e-250 | 872.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60694 | MS.gene044085 | PPI |
| MS.gene60694 | MS.gene00478 | PPI |
| MS.gene00474 | MS.gene60694 | PPI |
| MS.gene056047 | MS.gene60694 | PPI |
| MS.gene41083 | MS.gene60694 | PPI |
| MS.gene005239 | MS.gene60694 | PPI |
| MS.gene60694 | MS.gene055646 | PPI |
| MS.gene41081 | MS.gene60694 | PPI |
| MS.gene60694 | MS.gene24450 | PPI |
| MS.gene034801 | MS.gene60694 | PPI |
| MS.gene44109 | MS.gene60694 | PPI |
| MS.gene055644 | MS.gene60694 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60694.t1 | MTR_1g098530 | 98.646 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 0.0 | 907 |
| MS.gene60694.t1 | MTR_6g043520 | 84.199 | 443 | 70 | 0 | 1 | 443 | 1 | 443 | 0.0 | 773 |
| MS.gene60694.t1 | MTR_6g037550 | 78.481 | 316 | 62 | 1 | 1 | 316 | 1 | 310 | 0.0 | 516 |
| MS.gene60694.t1 | MTR_6g037540 | 74.803 | 127 | 32 | 0 | 317 | 443 | 1 | 127 | 1.23e-66 | 209 |
| MS.gene60694.t1 | MTR_6g037510 | 79.775 | 89 | 18 | 0 | 231 | 319 | 1 | 89 | 5.77e-45 | 151 |
| MS.gene60694.t1 | MTR_7g011070 | 32.277 | 347 | 182 | 11 | 4 | 333 | 17 | 327 | 6.34e-44 | 160 |
| MS.gene60694.t1 | MTR_7g011070 | 32.258 | 217 | 107 | 6 | 21 | 197 | 129 | 345 | 1.03e-19 | 91.7 |
| MS.gene60694.t1 | MTR_6g012590 | 30.747 | 348 | 186 | 10 | 4 | 333 | 16 | 326 | 3.36e-42 | 155 |
| MS.gene60694.t1 | MTR_6g012590 | 29.520 | 271 | 143 | 10 | 21 | 248 | 128 | 393 | 2.15e-17 | 84.3 |
| MS.gene60694.t1 | MTR_3g090960 | 31.322 | 348 | 186 | 11 | 4 | 334 | 16 | 327 | 5.07e-40 | 150 |
| MS.gene60694.t1 | MTR_3g090960 | 32.143 | 224 | 98 | 6 | 21 | 197 | 128 | 344 | 1.23e-23 | 103 |
| MS.gene60694.t1 | MTR_1g028440 | 31.897 | 348 | 184 | 11 | 4 | 334 | 16 | 327 | 3.30e-37 | 141 |
| MS.gene60694.t1 | MTR_1g028440 | 33.180 | 217 | 105 | 6 | 21 | 197 | 128 | 344 | 1.06e-23 | 103 |
| MS.gene60694.t1 | MTR_8g072130 | 54.545 | 121 | 21 | 1 | 317 | 437 | 1 | 87 | 1.55e-36 | 129 |
| MS.gene60694.t1 | MTR_3g090960 | 31.674 | 221 | 98 | 5 | 23 | 197 | 1 | 214 | 2.15e-24 | 104 |
| MS.gene60694.t1 | MTR_3g090960 | 30.568 | 229 | 114 | 6 | 118 | 334 | 2 | 197 | 3.11e-19 | 89.4 |
| MS.gene60694.t1 | MTR_6g037520 | 67.308 | 52 | 17 | 0 | 340 | 391 | 78 | 129 | 3.51e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60694.t1 | AT1G43190 | 82.207 | 444 | 66 | 2 | 1 | 443 | 1 | 432 | 0.0 | 746 |
| MS.gene60694.t1 | AT1G43190 | 82.207 | 444 | 66 | 2 | 1 | 443 | 1 | 432 | 0.0 | 746 |
| MS.gene60694.t1 | AT1G43190 | 81.757 | 444 | 66 | 3 | 1 | 443 | 1 | 430 | 0.0 | 736 |
| MS.gene60694.t1 | AT3G01150 | 31.593 | 364 | 195 | 12 | 4 | 348 | 15 | 343 | 5.83e-45 | 161 |
| MS.gene60694.t1 | AT3G01150 | 30.741 | 270 | 131 | 9 | 15 | 243 | 122 | 376 | 5.45e-22 | 97.8 |
| MS.gene60694.t1 | AT3G01150 | 32.727 | 330 | 174 | 10 | 4 | 320 | 15 | 309 | 2.71e-44 | 157 |
| MS.gene60694.t1 | AT3G01150 | 30.159 | 189 | 94 | 4 | 15 | 165 | 122 | 310 | 1.62e-14 | 74.7 |
| MS.gene60694.t1 | AT5G53180 | 31.034 | 348 | 187 | 12 | 4 | 334 | 16 | 327 | 3.41e-40 | 149 |
| MS.gene60694.t1 | AT5G53180 | 33.962 | 212 | 100 | 7 | 21 | 192 | 128 | 339 | 1.08e-24 | 105 |
| MS.gene60694.t1 | AT5G53180 | 33.493 | 209 | 100 | 6 | 23 | 192 | 1 | 209 | 3.67e-26 | 107 |
| MS.gene60694.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 32 | 239 | 5.83e-25 | 105 |
| MS.gene60694.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 18 | 225 | 6.03e-25 | 104 |
| MS.gene60694.t1 | AT5G53180 | 33.173 | 208 | 100 | 6 | 24 | 192 | 33 | 240 | 6.41e-25 | 105 |
| MS.gene60694.t1 | AT5G53180 | 46.154 | 104 | 54 | 2 | 91 | 192 | 126 | 229 | 4.74e-22 | 96.7 |
| MS.gene60694.t1 | AT3G01150 | 29.435 | 248 | 129 | 7 | 115 | 348 | 3 | 218 | 4.86e-22 | 95.9 |
| MS.gene60694.t1 | AT3G01150 | 31.034 | 261 | 124 | 9 | 24 | 243 | 6 | 251 | 1.38e-21 | 94.4 |
| MS.gene60694.t1 | AT3G01150 | 30.841 | 214 | 108 | 5 | 115 | 320 | 3 | 184 | 2.63e-21 | 91.7 |
| MS.gene60694.t1 | AT3G01150 | 30.556 | 180 | 87 | 4 | 24 | 165 | 6 | 185 | 2.19e-14 | 72.0 |
Find 104 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGTTCTCCCTTTA+TGG | 0.035664 | 1.2:+70876178 | MS.gene60694:CDS |
| GCGGCCATTGCAGCTGCTTT+TGG | 0.074456 | 1.2:+70875985 | MS.gene60694:CDS |
| TACGAACTTTGTAGGCTTTC+AGG | 0.175411 | 1.2:+70874639 | MS.gene60694:intron |
| TTCTGTTCTGTAGGGAGATT+TGG | 0.179215 | 1.2:-70875171 | None:intergenic |
| CTTCAGTTATTTCAACCTTT+TGG | 0.234793 | 1.2:+70872952 | MS.gene60694:CDS |
| CGCTTTCTGGCTCGGTAATT+CGG | 0.274128 | 1.2:+70877331 | MS.gene60694:CDS |
| TGGTTCCATGCTCCTTTAGA+AGG | 0.277369 | 1.2:-70877203 | None:intergenic |
| AGCTGCAATGGCCGCAGCAT+TGG | 0.284533 | 1.2:-70875977 | None:intergenic |
| TTCTCACAATGTTTCCATAA+AGG | 0.300059 | 1.2:-70876192 | None:intergenic |
| TCTCACAATGTTTCCATAAA+GGG | 0.309290 | 1.2:-70876191 | None:intergenic |
| GCTGCAATGGCCGCAGCATT+GGG | 0.311225 | 1.2:-70875976 | None:intergenic |
| AAGCATGCTACCTCGCTTTC+TGG | 0.321751 | 1.2:+70877318 | MS.gene60694:CDS |
| GGTTTGCCTCCTGGAATAAC+TGG | 0.333821 | 1.2:+70876012 | MS.gene60694:CDS |
| TACTGCAAGAACTGCACTTC+AGG | 0.342948 | 1.2:+70874696 | MS.gene60694:CDS |
| CAGAAGGAACGTCTTGCATT+TGG | 0.346584 | 1.2:-70873144 | None:intergenic |
| TCTGTTCTGTAGGGAGATTT+GGG | 0.347660 | 1.2:-70875170 | None:intergenic |
| AACTCTGTTGTGATTGATAC+TGG | 0.373607 | 1.2:-70874669 | None:intergenic |
| TCAGCACCTTGTGTTATGTT+TGG | 0.381551 | 1.2:-70877042 | None:intergenic |
| AGGAAGCATGTATGGTGTTC+AGG | 0.389056 | 1.2:+70875375 | MS.gene60694:CDS |
| ATACAGTACATCCACTGTTA+TGG | 0.393709 | 1.2:-70873773 | None:intergenic |
| ATGTATGGTGTTCAGGGTTC+TGG | 0.394858 | 1.2:+70875382 | MS.gene60694:CDS |
| AGCAAAGTATTTGAGATGAA+TGG | 0.395330 | 1.2:+70877234 | MS.gene60694:CDS |
| GCTCTTGATGAGATGAAAAC+TGG | 0.405496 | 1.2:-70873376 | None:intergenic |
| AAGAGTACCTTATGCTTGGC+TGG | 0.410645 | 1.2:-70873198 | None:intergenic |
| TCATTTGTCCCAGTTATTCC+AGG | 0.410874 | 1.2:-70876021 | None:intergenic |
| CATCTTCAGTGATGTCTTGT+GGG | 0.410989 | 1.2:-70877170 | None:intergenic |
| GAATTGTAACTAAGAGAATT+CGG | 0.415308 | 1.2:-70873735 | None:intergenic |
| CTTGGAAACCATCTCCCATC+TGG | 0.416528 | 1.2:-70876252 | None:intergenic |
| GAATAACTGGGACAAATGAT+AGG | 0.422703 | 1.2:+70876025 | MS.gene60694:CDS |
| GCAAAGTATTTGAGATGAAT+GGG | 0.425279 | 1.2:+70877235 | MS.gene60694:CDS |
| GTCATTCATGTTCGAAATGT+GGG | 0.433953 | 1.2:+70872091 | MS.gene60694:CDS |
| ACAAATGAATCATCTTCGTT+GGG | 0.440370 | 1.2:-70877140 | None:intergenic |
| CAGGGTTCTGGACCCAGGGC+AGG | 0.442597 | 1.2:+70875394 | MS.gene60694:CDS |
| TGCTACCTCGCTTTCTGGCT+CGG | 0.444036 | 1.2:+70877323 | MS.gene60694:CDS |
| ATTATAATAATGACCGTTCA+AGG | 0.444162 | 1.2:+70875050 | MS.gene60694:CDS |
| AGATGGTTTCCAAGCTGAAC+TGG | 0.446354 | 1.2:+70876261 | MS.gene60694:CDS |
| AGGTAGCATGCTTGCATACA+AGG | 0.447408 | 1.2:-70877308 | None:intergenic |
| TCAGTTTGAGACTGAGGATC+AGG | 0.451143 | 1.2:+70877275 | MS.gene60694:CDS |
| GTGTTCAGGGTTCTGGACCC+AGG | 0.453204 | 1.2:+70875389 | MS.gene60694:CDS |
| TTATGATGGTTGCTGTCAGC+TGG | 0.464841 | 1.2:+70874823 | MS.gene60694:CDS |
| CCTTCCAGTCGGATATCAAC+AGG | 0.465643 | 1.2:+70875505 | MS.gene60694:intron |
| GGCCTGCCTTTCTGTTCTGT+AGG | 0.467800 | 1.2:-70875180 | None:intergenic |
| CGAACATGAATGACCTTGGA+AGG | 0.468919 | 1.2:-70872082 | None:intergenic |
| TATATTCTGCAATTGAGAAT+AGG | 0.470609 | 1.2:-70877358 | None:intergenic |
| GACAAATGAATCATCTTCGT+TGG | 0.470970 | 1.2:-70877141 | None:intergenic |
| TACAGTACATCCACTGTTAT+GGG | 0.471701 | 1.2:-70873772 | None:intergenic |
| TAGGGTCGCAATATTTATGA+TGG | 0.475560 | 1.2:+70874809 | MS.gene60694:intron |
| CAGCTTGGATATGGTGATGC+AGG | 0.477074 | 1.2:+70875355 | MS.gene60694:intron |
| AATTCACTTGTAATTCATCA+AGG | 0.483108 | 1.2:-70875030 | None:intergenic |
| TCTGTGAAACAGCTTGGATA+TGG | 0.488413 | 1.2:+70875346 | MS.gene60694:intron |
| GTAACTAAGAGAATTCGGTT+TGG | 0.488756 | 1.2:-70873730 | None:intergenic |
| GTTAAATTTAGCACCTGCCC+TGG | 0.490169 | 1.2:-70875407 | None:intergenic |
| GCCTGCCTTTCTGTTCTGTA+GGG | 0.494453 | 1.2:-70875179 | None:intergenic |
| ATCTGGATAAGTGCATGATC+TGG | 0.502751 | 1.2:-70876235 | None:intergenic |
| GGAAGCATGTATGGTGTTCA+GGG | 0.508233 | 1.2:+70875376 | MS.gene60694:CDS |
| AGCTTTGTGATGACTCCAAA+AGG | 0.509921 | 1.2:-70872967 | None:intergenic |
| AGCTAAGAGTACCTTATGCT+TGG | 0.512139 | 1.2:-70873202 | None:intergenic |
| CCTCAGTCTCAAACTGAACC+AGG | 0.518672 | 1.2:-70877269 | None:intergenic |
| GGTGATGCAGGAAGCATGTA+TGG | 0.523701 | 1.2:+70875367 | MS.gene60694:CDS |
| TCATCTTCAGTGATGTCTTG+TGG | 0.524428 | 1.2:-70877171 | None:intergenic |
| GTAACATTTCAGAAGTCAGC+TGG | 0.527919 | 1.2:+70873832 | MS.gene60694:CDS |
| GCACTTATCCAGATGGGAGA+TGG | 0.531925 | 1.2:+70876244 | MS.gene60694:CDS |
| TATCATGGCTGAACCTTCCA+AGG | 0.532831 | 1.2:+70872069 | None:intergenic |
| TGAGATTGTGACCCTTCTAA+AGG | 0.536446 | 1.2:+70877191 | MS.gene60694:CDS |
| AGAGTACCTTATGCTTGGCT+GGG | 0.540483 | 1.2:-70873197 | None:intergenic |
| ATTTCGAACATGAATGACCT+TGG | 0.541812 | 1.2:-70872086 | None:intergenic |
| TAGCAGCGTTACGATTAAAA+CGG | 0.543089 | 1.2:-70877095 | None:intergenic |
| GAAACACCCAGCCAAGCATA+AGG | 0.545572 | 1.2:+70873191 | MS.gene60694:CDS |
| TGTTCAGGGTTCTGGACCCA+GGG | 0.546711 | 1.2:+70875390 | MS.gene60694:CDS |
| TCCCTACAGAACAGAAAGGC+AGG | 0.547542 | 1.2:+70875178 | MS.gene60694:CDS |
| AAATACTTTGCTATTGACAA+TGG | 0.551736 | 1.2:-70877223 | None:intergenic |
| GGTCATTCATGTTCGAAATG+TGG | 0.557701 | 1.2:+70872090 | MS.gene60694:CDS |
| TTAAATTTAGCACCTGCCCT+GGG | 0.559061 | 1.2:-70875406 | None:intergenic |
| AGTGTACAGCCAGTTCAGCT+TGG | 0.569092 | 1.2:-70876270 | None:intergenic |
| AGTGATGTCTTGTGGGAGTG+TGG | 0.570311 | 1.2:-70877163 | None:intergenic |
| TGTAAAGCACTAACTGCAGA+AGG | 0.572096 | 1.2:-70873160 | None:intergenic |
| AGATCATGCACTTATCCAGA+TGG | 0.574543 | 1.2:+70876237 | MS.gene60694:CDS |
| GGTTCCATGCTCCTTTAGAA+GGG | 0.574971 | 1.2:-70877202 | None:intergenic |
| GAATGGGAAGAAACAAGGCC+TGG | 0.576914 | 1.2:+70877251 | MS.gene60694:CDS |
| GAGATGAATGGGAAGAAACA+AGG | 0.597286 | 1.2:+70877246 | MS.gene60694:CDS |
| CCTGGTTCAGTTTGAGACTG+AGG | 0.597497 | 1.2:+70877269 | MS.gene60694:CDS |
| GATCATGCACTTATCCAGAT+GGG | 0.599793 | 1.2:+70876238 | MS.gene60694:CDS |
| AGAGACTGAATCACCTTGAA+CGG | 0.607191 | 1.2:-70875063 | None:intergenic |
| AATTACCGAGCCAGAAAGCG+AGG | 0.607510 | 1.2:-70877328 | None:intergenic |
| GTGACCCTTCTAAAGGAGCA+TGG | 0.610579 | 1.2:+70877198 | MS.gene60694:CDS |
| AAGTCAAGGACGAGGAGATG+AGG | 0.618331 | 1.2:+70873415 | MS.gene60694:CDS |
| GTTTGCCTCCTGGAATAACT+GGG | 0.627364 | 1.2:+70876013 | MS.gene60694:CDS |
| AATCTCCCTACAGAACAGAA+AGG | 0.630603 | 1.2:+70875174 | MS.gene60694:CDS |
| ACTGGCTGTACACTTTCTGA+AGG | 0.640738 | 1.2:+70876279 | MS.gene60694:CDS |
| GTTGTTTGATAAGCGACTAG+AGG | 0.641453 | 1.2:+70877002 | MS.gene60694:CDS |
| ACAACAATAGATCAAAGTCA+AGG | 0.643404 | 1.2:+70873401 | MS.gene60694:CDS |
| GGTAGCATGCTTGCATACAA+GGG | 0.647100 | 1.2:-70877307 | None:intergenic |
| CAAACAAAACATACTTGTGG+AGG | 0.649722 | 1.2:-70875201 | None:intergenic |
| CAAATGAATCATCTTCGTTG+GGG | 0.661543 | 1.2:-70877139 | None:intergenic |
| TCGTTGGGGAGCAGCAATAG+CGG | 0.661679 | 1.2:-70877125 | None:intergenic |
| TCATTCATGTTCGAAATGTG+GGG | 0.666929 | 1.2:+70872092 | MS.gene60694:CDS |
| TTTGTCCCAGTTATTCCAGG+AGG | 0.668050 | 1.2:-70876018 | None:intergenic |
| ATAGATCAAAGTCAAGGACG+AGG | 0.680422 | 1.2:+70873407 | MS.gene60694:CDS |
| AAGCATCCAAACATAACACA+AGG | 0.689131 | 1.2:+70877036 | MS.gene60694:CDS |
| ACTGTAGATGCCCAATGCTG+CGG | 0.690338 | 1.2:+70875966 | MS.gene60694:intron |
| CGTGCTCTATCCCATAACAG+TGG | 0.694871 | 1.2:+70873762 | MS.gene60694:CDS |
| TGTGGGGCACGAAATATCCG+AGG | 0.714184 | 1.2:+70872108 | MS.gene60694:CDS |
| TAGTCGCTTATCAAACAACA+TGG | 0.721208 | 1.2:-70876998 | None:intergenic |
| ATCTTCTCCACAGATCCATG+AGG | 0.735582 | 1.2:-70873808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACTTTAAATTCTTATA+TGG | + | chr1.2:70874987-70875006 | MS.gene60694:intron | 10.0% |
| !!! | CTAATTATCTTTTTATTTTA+GGG | + | chr1.2:70873337-70873356 | MS.gene60694:intron | 10.0% |
| !!! | TAATTATCTTTTTATTTTAG+GGG | + | chr1.2:70873338-70873357 | MS.gene60694:intron | 10.0% |
| !!! | TCTAATTATCTTTTTATTTT+AGG | + | chr1.2:70873336-70873355 | MS.gene60694:intron | 10.0% |
| !!! | TTTTTTTTTTTAATGTTTAG+TGG | + | chr1.2:70874470-70874489 | MS.gene60694:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTAG+CGG | + | chr1.2:70874399-70874418 | MS.gene60694:intron | 10.0% |
| !! | AAAAAAATAAGAGAATAGAA+CGG | - | chr1.2:70875920-70875939 | None:intergenic | 15.0% |
| !! | AAATTCAGAAAAAACTTAAA+AGG | - | chr1.2:70873898-70873917 | None:intergenic | 15.0% |
| !! | AATCTTATAAATAGAAAAGA+GGG | - | chr1.2:70876944-70876963 | None:intergenic | 15.0% |
| !! | AATTCAGAAAAAACTTAAAA+GGG | - | chr1.2:70873897-70873916 | None:intergenic | 15.0% |
| !! | ATTTAAGTAAATGATTTACA+TGG | - | chr1.2:70876596-70876615 | None:intergenic | 15.0% |
| !! | GAATATTTAATTATAATACC+AGG | + | chr1.2:70876324-70876343 | MS.gene60694:intron | 15.0% |
| !! | TACTTTGTTAAAAAAAAATC+AGG | - | chr1.2:70876746-70876765 | None:intergenic | 15.0% |
| !! | TTATAATTAAATATTCAGCA+AGG | - | chr1.2:70876320-70876339 | None:intergenic | 15.0% |
| !! | TTATGTTCATTTACAATTAT+AGG | + | chr1.2:70872829-70872848 | MS.gene60694:intron | 15.0% |
| !!! | AATTATCTTTTTATTTTAGG+GGG | + | chr1.2:70873339-70873358 | MS.gene60694:intron | 15.0% |
| !!! | ATGTGTTAAATAATATGTTT+TGG | + | chr1.2:70876787-70876806 | MS.gene60694:intron | 15.0% |
| !!! | ATTATTTTCTTAATTTTGGT+CGG | + | chr1.2:70876429-70876448 | MS.gene60694:intron | 15.0% |
| !!! | ATTTAAAGTAAATAAGAGAA+AGG | - | chr1.2:70874980-70874999 | None:intergenic | 15.0% |
| !!! | TTTGTAATTACATTTTCATA+TGG | + | chr1.2:70874531-70874550 | MS.gene60694:intron | 15.0% |
| !!! | TTTTTTTTTTTATGTTTAGC+GGG | + | chr1.2:70874400-70874419 | MS.gene60694:intron | 15.0% |
| !! | AAAAAATTCCACAAATTGAT+TGG | - | chr1.2:70875692-70875711 | None:intergenic | 20.0% |
| !! | AAAAGATAATTAGATTGTTC+CGG | - | chr1.2:70873330-70873349 | None:intergenic | 20.0% |
| !! | AAAATGTAATTACAAAGCAA+AGG | - | chr1.2:70874527-70874546 | None:intergenic | 20.0% |
| !! | AAACAAACAATTTCATTTGA+AGG | - | chr1.2:70873033-70873052 | None:intergenic | 20.0% |
| !! | AAATGTAATTACAAAGCAAA+GGG | - | chr1.2:70874526-70874545 | None:intergenic | 20.0% |
| !! | AAGTATATGATAAAGAGAAA+AGG | - | chr1.2:70873632-70873651 | None:intergenic | 20.0% |
| !! | ACTTCTAAATGAATTTCTAA+AGG | + | chr1.2:70874357-70874376 | MS.gene60694:intron | 20.0% |
| !! | CAATCTTATAAATAGAAAAG+AGG | - | chr1.2:70876945-70876964 | None:intergenic | 20.0% |
| !! | CCAATTAATATTAAAATCTC+CGG | + | chr1.2:70873308-70873327 | MS.gene60694:intron | 20.0% |
| !! | TCTAAATAATTTCTGTGTAT+TGG | + | chr1.2:70874876-70874895 | MS.gene60694:intron | 20.0% |
| !! | TGTATTTGTAATAGTATGTT+TGG | - | chr1.2:70874184-70874203 | None:intergenic | 20.0% |
| !!! | ACAATTGTTGTGTTTTTTTT+TGG | + | chr1.2:70872222-70872241 | MS.gene60694:intron | 20.0% |
| !!! | ACTTTTTTCTAAGTTGTTAA+TGG | - | chr1.2:70874041-70874060 | None:intergenic | 20.0% |
| !!! | AGTATGATTTTTTAGAAATC+TGG | + | chr1.2:70875871-70875890 | MS.gene60694:intron | 20.0% |
| !!! | ATTTTATTTGATGCATGTAT+AGG | + | chr1.2:70874581-70874600 | MS.gene60694:intron | 20.0% |
| !!! | ATTTTCAATTTTGAGATGTA+GGG | + | chr1.2:70876973-70876992 | MS.gene60694:intron | 20.0% |
| !!! | CAATTGTTGTGTTTTTTTTT+GGG | + | chr1.2:70872223-70872242 | MS.gene60694:intron | 20.0% |
| !!! | CTAAATATTGATTGAAACTT+TGG | + | chr1.2:70874779-70874798 | MS.gene60694:intron | 20.0% |
| !!! | CTTTATTTATCTGTTATGAA+TGG | + | chr1.2:70875257-70875276 | MS.gene60694:intron | 20.0% |
| !!! | TTATTTTGCTTTTCAAATCT+GGG | + | chr1.2:70875755-70875774 | MS.gene60694:intron | 20.0% |
| !!! | TTTAGTTTATTCAGATTTGA+TGG | - | chr1.2:70876896-70876915 | None:intergenic | 20.0% |
| !!! | TTTATTTTGCTTTTCAAATC+TGG | + | chr1.2:70875754-70875773 | MS.gene60694:intron | 20.0% |
| !!! | TTTTAGATATTGATTGTGAT+TGG | + | chr1.2:70872351-70872370 | MS.gene60694:intron | 20.0% |
| !!! | TTTTTTTTTTATGTTTAGCG+GGG | + | chr1.2:70874401-70874420 | MS.gene60694:intron | 20.0% |
| ! | AAAAATGTGTAATGGTTGTA+AGG | + | chr1.2:70875630-70875649 | MS.gene60694:intron | 25.0% |
| ! | AAACAAATTTCGAGCTAAAT+AGG | - | chr1.2:70876130-70876149 | None:intergenic | 25.0% |
| ! | AATTCACTTGTAATTCATCA+AGG | - | chr1.2:70875033-70875052 | None:intergenic | 25.0% |
| ! | AGATAACAATACAAAGATCT+AGG | - | chr1.2:70873555-70873574 | None:intergenic | 25.0% |
| ! | AGTAAATAAGAGAAAGGAAA+AGG | - | chr1.2:70874974-70874993 | None:intergenic | 25.0% |
| ! | ATAACAATACAAAGATCTAG+GGG | - | chr1.2:70873553-70873572 | None:intergenic | 25.0% |
| ! | ATTATAATAATGACCGTTCA+AGG | + | chr1.2:70875050-70875069 | MS.gene60694:CDS | 25.0% |
| ! | GAATTGTAACTAAGAGAATT+CGG | - | chr1.2:70873738-70873757 | None:intergenic | 25.0% |
| ! | GATAACAATACAAAGATCTA+GGG | - | chr1.2:70873554-70873573 | None:intergenic | 25.0% |
| ! | GATCTTTGTATTGTTATCTT+AGG | + | chr1.2:70873556-70873575 | MS.gene60694:intron | 25.0% |
| ! | GCAAAAGTTATAAATCTTTC+AGG | - | chr1.2:70872909-70872928 | None:intergenic | 25.0% |
| ! | GCAACATTAAAAATGTGTAA+TGG | + | chr1.2:70875622-70875641 | MS.gene60694:intron | 25.0% |
| ! | TATATTCTGCAATTGAGAAT+AGG | - | chr1.2:70877361-70877380 | None:intergenic | 25.0% |
| ! | TATTCCACACAATATACAAA+GGG | - | chr1.2:70876668-70876687 | None:intergenic | 25.0% |
| ! | TCACTTTCTCTAATTATTAC+CGG | + | chr1.2:70872498-70872517 | MS.gene60694:intron | 25.0% |
| ! | TGATATCAAAACAATAGTTG+TGG | - | chr1.2:70873244-70873263 | None:intergenic | 25.0% |
| ! | TTATTCCACACAATATACAA+AGG | - | chr1.2:70876669-70876688 | None:intergenic | 25.0% |
| ! | TTGAATAAGTATAAGCATAG+TGG | + | chr1.2:70874244-70874263 | MS.gene60694:intron | 25.0% |
| ! | TTTATACAACGATAAATCTC+TGG | - | chr1.2:70876410-70876429 | None:intergenic | 25.0% |
| !! | AGGATCTATTTTATAAGTAG+AGG | + | chr1.2:70876701-70876720 | MS.gene60694:intron | 25.0% |
| !! | AGTATGTTTGGAATATATGA+AGG | - | chr1.2:70874172-70874191 | None:intergenic | 25.0% |
| !! | GTATGTTTGGAATATATGAA+GGG | - | chr1.2:70874171-70874190 | None:intergenic | 25.0% |
| !! | TAACATTTTCTCTCTGTTTT+TGG | + | chr1.2:70874724-70874743 | MS.gene60694:intron | 25.0% |
| !! | TGAAACTTTGGAAATTTCTA+GGG | + | chr1.2:70874791-70874810 | MS.gene60694:intron | 25.0% |
| !! | TGATGTTGTTTGTATGTAAT+AGG | + | chr1.2:70874311-70874330 | MS.gene60694:intron | 25.0% |
| !! | TTGAAACTTTGGAAATTTCT+AGG | + | chr1.2:70874790-70874809 | MS.gene60694:intron | 25.0% |
| !!! | AAATACTTTGCTATTGACAA+TGG | - | chr1.2:70877226-70877245 | None:intergenic | 25.0% |
| !!! | AATTTTAACAGAGTGAATTG+AGG | + | chr1.2:70873913-70873932 | MS.gene60694:intron | 25.0% |
| !!! | ATAATTTCTGTGTATTGGTT+TGG | + | chr1.2:70874881-70874900 | MS.gene60694:intron | 25.0% |
| !!! | ATGTTTTTATGACTATGCTA+TGG | + | chr1.2:70872198-70872217 | MS.gene60694:intron | 25.0% |
| !!! | CCGGAGATTTTAATATTAAT+TGG | - | chr1.2:70873311-70873330 | None:intergenic | 25.0% |
| !!! | CTAAATTTAACTGATTTGGT+TGG | + | chr1.2:70875419-70875438 | MS.gene60694:intron | 25.0% |
| !!! | GATTTTCAATTTTGAGATGT+AGG | + | chr1.2:70876972-70876991 | MS.gene60694:intron | 25.0% |
| !!! | TTTTAGAAATTTCTTCGTAG+TGG | + | chr1.2:70872314-70872333 | MS.gene60694:intron | 25.0% |
| AAAACAAGAACTAACAAGTC+CGG | - | chr1.2:70874755-70874774 | None:intergenic | 30.0% | |
| AAATCACATTTCTCTTTCTC+TGG | + | chr1.2:70876557-70876576 | MS.gene60694:intron | 30.0% | |
| ACAAATGAATCATCTTCGTT+GGG | - | chr1.2:70877143-70877162 | None:intergenic | 30.0% | |
| ACAACAATAGATCAAAGTCA+AGG | + | chr1.2:70873401-70873420 | MS.gene60694:CDS | 30.0% | |
| ACGCATTATGCATGAATTAA+TGG | + | chr1.2:70874440-70874459 | MS.gene60694:intron | 30.0% | |
| ATGATCTTTGTCATCACATA+CGG | + | chr1.2:70873263-70873282 | MS.gene60694:intron | 30.0% | |
| CGCACATTCAAAACAAAATA+TGG | - | chr1.2:70872380-70872399 | None:intergenic | 30.0% | |
| GGATATTCAATTCTCAAAGT+AGG | + | chr1.2:70874844-70874863 | MS.gene60694:intron | 30.0% | |
| GGTGCTAAATTTAACTGATT+TGG | + | chr1.2:70875415-70875434 | MS.gene60694:intron | 30.0% | |
| GTAAATTCATCAAGTAAACC+TGG | - | chr1.2:70876345-70876364 | None:intergenic | 30.0% | |
| GTAATGGTTGTAAGGTATAA+CGG | + | chr1.2:70875638-70875657 | MS.gene60694:intron | 30.0% | |
| GTCACAGTTTGATATTATTC+TGG | + | chr1.2:70875553-70875572 | MS.gene60694:intron | 30.0% | |
| TCAGTTGTAATATTCTGACA+TGG | + | chr1.2:70876854-70876873 | MS.gene60694:intron | 30.0% | |
| TCTCACAATGTTTCCATAAA+GGG | - | chr1.2:70876194-70876213 | None:intergenic | 30.0% | |
| TGGAATAAGATTGCAATTGA+AGG | + | chr1.2:70876681-70876700 | MS.gene60694:intron | 30.0% | |
| TTCATCACAAGTTTCTTTGA+TGG | + | chr1.2:70876477-70876496 | MS.gene60694:intron | 30.0% | |
| TTCTCACAATGTTTCCATAA+AGG | - | chr1.2:70876195-70876214 | None:intergenic | 30.0% | |
| TTTCAAATCTGGGTTTGATA+GGG | + | chr1.2:70875765-70875784 | MS.gene60694:intron | 30.0% | |
| TTTGTATGTAATAGGCACAT+AGG | + | chr1.2:70874319-70874338 | MS.gene60694:intron | 30.0% | |
| ! | AGCAAAGTATTTGAGATGAA+TGG | + | chr1.2:70877234-70877253 | MS.gene60694:CDS | 30.0% |
| ! | GAAAGAGAAAACCTGATTTT+TGG | - | chr1.2:70873007-70873026 | None:intergenic | 30.0% |
| ! | GCAAAGTATTTGAGATGAAT+GGG | + | chr1.2:70877235-70877254 | MS.gene60694:CDS | 30.0% |
| ! | GTTAGTGCTTTACAGTTTTA+TGG | + | chr1.2:70873169-70873188 | MS.gene60694:CDS | 30.0% |
| ! | TTTTCAAATCTGGGTTTGAT+AGG | + | chr1.2:70875764-70875783 | MS.gene60694:intron | 30.0% |
| !! | ACTTTTTCTTAGACCATGAT+CGG | + | chr1.2:70872704-70872723 | MS.gene60694:intron | 30.0% |
| !! | CTTCAGTTATTTCAACCTTT+TGG | + | chr1.2:70872952-70872971 | MS.gene60694:CDS | 30.0% |
| !! | TGGAGCACTTTTAAATTCTA+AGG | - | chr1.2:70873057-70873076 | None:intergenic | 30.0% |
| !!! | TATCAAGTTTTTTCTCCTCA+TGG | + | chr1.2:70873793-70873812 | MS.gene60694:CDS | 30.0% |
| !!! | TATCTTTTTATTTTAGGGGG+AGG | + | chr1.2:70873342-70873361 | MS.gene60694:intron | 30.0% |
| !!! | TGTTTTGAGTTTCTGTTTCT+TGG | + | chr1.2:70875802-70875821 | MS.gene60694:intron | 30.0% |
| AAATCATTCTGCAATCACAG+TGG | - | chr1.2:70872931-70872950 | None:intergenic | 35.0% | |
| AACTCTGTTGTGATTGATAC+TGG | - | chr1.2:70874672-70874691 | None:intergenic | 35.0% | |
| AAGAGAAAGGAAAAGGTAGA+AGG | - | chr1.2:70874967-70874986 | None:intergenic | 35.0% | |
| AAGAGAAGAGATAGAGAGAA+AGG | - | chr1.2:70873668-70873687 | None:intergenic | 35.0% | |
| AAGCATCCAAACATAACACA+AGG | + | chr1.2:70877036-70877055 | MS.gene60694:CDS | 35.0% | |
| AAGGGAAAGAAAGAAGAGAA+AGG | - | chr1.2:70873879-70873898 | None:intergenic | 35.0% | |
| AATAGGCACATAGGAGAAAA+AGG | + | chr1.2:70874328-70874347 | MS.gene60694:intron | 35.0% | |
| ACATTTCTCTTTCTCTGGTT+CGG | + | chr1.2:70876562-70876581 | MS.gene60694:intron | 35.0% | |
| AGCCAAACAAAACATACTTG+TGG | - | chr1.2:70875207-70875226 | None:intergenic | 35.0% | |
| AGGGAAAGAAAGAAGAGAAA+GGG | - | chr1.2:70873878-70873897 | None:intergenic | 35.0% | |
| ATACAGTACATCCACTGTTA+TGG | - | chr1.2:70873776-70873795 | None:intergenic | 35.0% | |
| ATAGGCACATAGGAGAAAAA+GGG | + | chr1.2:70874329-70874348 | MS.gene60694:intron | 35.0% | |
| ATTTCGAACATGAATGACCT+TGG | - | chr1.2:70872089-70872108 | None:intergenic | 35.0% | |
| CAAACAAAACATACTTGTGG+AGG | - | chr1.2:70875204-70875223 | None:intergenic | 35.0% | |
| CAAATGAATCATCTTCGTTG+GGG | - | chr1.2:70877142-70877161 | None:intergenic | 35.0% | |
| CAAGTGTTATGCTACTATGA+GGG | - | chr1.2:70874293-70874312 | None:intergenic | 35.0% | |
| GAATAACTGGGACAAATGAT+AGG | + | chr1.2:70876025-70876044 | MS.gene60694:CDS | 35.0% | |
| GACAAATGAATCATCTTCGT+TGG | - | chr1.2:70877144-70877163 | None:intergenic | 35.0% | |
| GATTGTAGCCAATCAATTTG+TGG | + | chr1.2:70875681-70875700 | MS.gene60694:intron | 35.0% | |
| GTAACTAAGAGAATTCGGTT+TGG | - | chr1.2:70873733-70873752 | None:intergenic | 35.0% | |
| GTAGTACTAGTTGTTGTGTT+TGG | + | chr1.2:70876763-70876782 | MS.gene60694:intron | 35.0% | |
| GTCATTCATGTTCGAAATGT+GGG | + | chr1.2:70872091-70872110 | MS.gene60694:CDS | 35.0% | |
| TAACAGTGTCCAAGTACTAA+TGG | - | chr1.2:70874016-70874035 | None:intergenic | 35.0% | |
| TACAGTACATCCACTGTTAT+GGG | - | chr1.2:70873775-70873794 | None:intergenic | 35.0% | |
| TACTTGCTTACGAACTTTGT+AGG | + | chr1.2:70874631-70874650 | MS.gene60694:intron | 35.0% | |
| TAGCAGCGTTACGATTAAAA+CGG | - | chr1.2:70877098-70877117 | None:intergenic | 35.0% | |
| TAGGGTCGCAATATTTATGA+TGG | + | chr1.2:70874809-70874828 | MS.gene60694:intron | 35.0% | |
| TAGTCGCTTATCAAACAACA+TGG | - | chr1.2:70877001-70877020 | None:intergenic | 35.0% | |
| TCAAGTGTTATGCTACTATG+AGG | - | chr1.2:70874294-70874313 | None:intergenic | 35.0% | |
| TCATTCATGTTCGAAATGTG+GGG | + | chr1.2:70872092-70872111 | MS.gene60694:CDS | 35.0% | |
| TCGACATGATTGGATAAGAA+TGG | + | chr1.2:70872756-70872775 | MS.gene60694:intron | 35.0% | |
| TGATCCCTTTGTATATTGTG+TGG | + | chr1.2:70876661-70876680 | MS.gene60694:intron | 35.0% | |
| TGATTGGATAAGAATGGAGT+TGG | + | chr1.2:70872762-70872781 | MS.gene60694:intron | 35.0% | |
| TGGATAAGTGCCTGTAAATA+CGG | - | chr1.2:70873127-70873146 | None:intergenic | 35.0% | |
| TGTGAAATAAATGCCGATCA+TGG | - | chr1.2:70872720-70872739 | None:intergenic | 35.0% | |
| TTAGGCTGTTACATTTCAGT+GGG | + | chr1.2:70873574-70873593 | MS.gene60694:intron | 35.0% | |
| TTGGCTACAATCGTAAAACT+TGG | - | chr1.2:70875673-70875692 | None:intergenic | 35.0% | |
| TTTCCTGATAAAAAGAGTCC+AGG | - | chr1.2:70872288-70872307 | None:intergenic | 35.0% | |
| ! | AGTTTCTGTTTCTTGGACAA+TGG | + | chr1.2:70875809-70875828 | MS.gene60694:intron | 35.0% |
| ! | ATAAGCATAGTGGTGTCAAT+TGG | + | chr1.2:70874254-70874273 | MS.gene60694:intron | 35.0% |
| ! | TTCAACTTGTTCTCCCTTTA+TGG | + | chr1.2:70876178-70876197 | MS.gene60694:CDS | 35.0% |
| ! | TTGATGGCACTAAACAATGT+TGG | - | chr1.2:70876880-70876899 | None:intergenic | 35.0% |
| !! | AAAGAGAAAGCACTTACATC+AGG | - | chr1.2:70876078-70876097 | None:intergenic | 35.0% |
| !! | CTCCACAAGTATGTTTTGTT+TGG | + | chr1.2:70875202-70875221 | MS.gene60694:intron | 35.0% |
| AAGGAAAAGGTAGAAGGTTG+AGG | - | chr1.2:70874961-70874980 | None:intergenic | 40.0% | |
| AATCTCCCTACAGAACAGAA+AGG | + | chr1.2:70875174-70875193 | MS.gene60694:CDS | 40.0% | |
| AATCTGGGTTTGATAGGGAA+AGG | + | chr1.2:70875770-70875789 | MS.gene60694:intron | 40.0% | |
| AATGTGTGAGCCGTATTTAC+AGG | + | chr1.2:70873114-70873133 | MS.gene60694:intron | 40.0% | |
| ACCAAGAGGGTGAATGAAAA+GGG | + | chr1.2:70872258-70872277 | MS.gene60694:intron | 40.0% | |
| ACTTCGCAAAGATCAATGAG+AGG | - | chr1.2:70875286-70875305 | None:intergenic | 40.0% | |
| AGAGAAAGAAAGTGAGAAGC+AGG | - | chr1.2:70872140-70872159 | None:intergenic | 40.0% | |
| AGAGACTGAATCACCTTGAA+CGG | - | chr1.2:70875066-70875085 | None:intergenic | 40.0% | |
| AGATCATGCACTTATCCAGA+TGG | + | chr1.2:70876237-70876256 | MS.gene60694:CDS | 40.0% | |
| AGTGTCCAAGTACTAATGGT+GGG | - | chr1.2:70874012-70874031 | None:intergenic | 40.0% | |
| ATAGATCAAAGTCAAGGACG+AGG | + | chr1.2:70873407-70873426 | MS.gene60694:CDS | 40.0% | |
| ATCTGGATAAGTGCATGATC+TGG | - | chr1.2:70876238-70876257 | None:intergenic | 40.0% | |
| ATCTGGGTTTGATAGGGAAA+GGG | + | chr1.2:70875771-70875790 | MS.gene60694:intron | 40.0% | |
| CATCTTCAGTGATGTCTTGT+GGG | - | chr1.2:70877173-70877192 | None:intergenic | 40.0% | |
| CTTACAAAAGCAGGCAGAAT+TGG | + | chr1.2:70873496-70873515 | MS.gene60694:intron | 40.0% | |
| CTTAGGCTGTTACATTTCAG+TGG | + | chr1.2:70873573-70873592 | MS.gene60694:intron | 40.0% | |
| GAACTTGACATTGACCAAGA+GGG | + | chr1.2:70872245-70872264 | MS.gene60694:intron | 40.0% | |
| GAGAAAGAAAGTGAGAAGCA+GGG | - | chr1.2:70872139-70872158 | None:intergenic | 40.0% | |
| GAGATGAATGGGAAGAAACA+AGG | + | chr1.2:70877246-70877265 | MS.gene60694:CDS | 40.0% | |
| GATCATGCACTTATCCAGAT+GGG | + | chr1.2:70876238-70876257 | MS.gene60694:CDS | 40.0% | |
| GATGTTACGTGCCAAAAATC+AGG | + | chr1.2:70872993-70873012 | MS.gene60694:CDS | 40.0% | |
| GCTCTTGATGAGATGAAAAC+TGG | - | chr1.2:70873379-70873398 | None:intergenic | 40.0% | |
| GGTCATTCATGTTCGAAATG+TGG | + | chr1.2:70872090-70872109 | MS.gene60694:CDS | 40.0% | |
| GTAACATTTCAGAAGTCAGC+TGG | + | chr1.2:70873832-70873851 | MS.gene60694:CDS | 40.0% | |
| GTTGTTTGATAAGCGACTAG+AGG | + | chr1.2:70877002-70877021 | MS.gene60694:CDS | 40.0% | |
| TACGAACTTTGTAGGCTTTC+AGG | + | chr1.2:70874639-70874658 | MS.gene60694:intron | 40.0% | |
| TCAGCACCTTGTGTTATGTT+TGG | - | chr1.2:70877045-70877064 | None:intergenic | 40.0% | |
| TCATCTTCAGTGATGTCTTG+TGG | - | chr1.2:70877174-70877193 | None:intergenic | 40.0% | |
| TCATCTTCTGTGAAACAGCT+TGG | + | chr1.2:70875340-70875359 | MS.gene60694:intron | 40.0% | |
| TCATTTGTCCCAGTTATTCC+AGG | - | chr1.2:70876024-70876043 | None:intergenic | 40.0% | |
| TCGAATGTAATCACGTGTGT+CGG | - | chr1.2:70872473-70872492 | None:intergenic | 40.0% | |
| TCTGTGAAACAGCTTGGATA+TGG | + | chr1.2:70875346-70875365 | MS.gene60694:intron | 40.0% | |
| TCTGTTCTGTAGGGAGATTT+GGG | - | chr1.2:70875173-70875192 | None:intergenic | 40.0% | |
| TGAGATTGTGACCCTTCTAA+AGG | + | chr1.2:70877191-70877210 | MS.gene60694:CDS | 40.0% | |
| TGTTATGCTACTATGAGGGT+TGG | - | chr1.2:70874289-70874308 | None:intergenic | 40.0% | |
| TTAAATTTAGCACCTGCCCT+GGG | - | chr1.2:70875409-70875428 | None:intergenic | 40.0% | |
| TTCTGTTCTGTAGGGAGATT+TGG | - | chr1.2:70875174-70875193 | None:intergenic | 40.0% | |
| ! | AGACCTGGACTCTTTTTATC+AGG | + | chr1.2:70872282-70872301 | MS.gene60694:intron | 40.0% |
| ! | AGCTTTGTGATGACTCCAAA+AGG | - | chr1.2:70872970-70872989 | None:intergenic | 40.0% |
| ! | TGTAAAGCACTAACTGCAGA+AGG | - | chr1.2:70873163-70873182 | None:intergenic | 40.0% |
| ! | TGTCGATTGCTTACAAAAGC+AGG | + | chr1.2:70873487-70873506 | MS.gene60694:intron | 40.0% |
| ! | TTTTTCTCCTCATGGATCTG+TGG | + | chr1.2:70873801-70873820 | MS.gene60694:CDS | 40.0% |
| !! | AGCTAAGAGTACCTTATGCT+TGG | - | chr1.2:70873205-70873224 | None:intergenic | 40.0% |
| !!! | CTCTCTGTTTTTGGCTTTAC+CGG | + | chr1.2:70874733-70874752 | MS.gene60694:intron | 40.0% |
| ACTGGCTGTACACTTTCTGA+AGG | + | chr1.2:70876279-70876298 | MS.gene60694:CDS | 45.0% | |
| ACTTCTAATCAAAGCCGTGC+TGG | + | chr1.2:70872438-70872457 | MS.gene60694:intron | 45.0% | |
| AGATGGTTTCCAAGCTGAAC+TGG | + | chr1.2:70876261-70876280 | MS.gene60694:CDS | 45.0% | |
| AGGTAGCATGCTTGCATACA+AGG | - | chr1.2:70877311-70877330 | None:intergenic | 45.0% | |
| AGTGAAAGGACAGCACATCT+AGG | - | chr1.2:70872635-70872654 | None:intergenic | 45.0% | |
| ATCTTCTCCACAGATCCATG+AGG | - | chr1.2:70873811-70873830 | None:intergenic | 45.0% | |
| ATGTATGGTGTTCAGGGTTC+TGG | + | chr1.2:70875382-70875401 | MS.gene60694:CDS | 45.0% | |
| CAACGTGTCAATGTCGTGTT+CGG | + | chr1.2:70872524-70872543 | MS.gene60694:intron | 45.0% | |
| CAGAAGGAACGTCTTGCATT+TGG | - | chr1.2:70873147-70873166 | None:intergenic | 45.0% | |
| CAGCTTTCTGTCGACATGAT+TGG | + | chr1.2:70872746-70872765 | MS.gene60694:intron | 45.0% | |
| CAGTGTCCAAGTACTAATGG+TGG | - | chr1.2:70874013-70874032 | None:intergenic | 45.0% | |
| CGAACATGAATGACCTTGGA+AGG | - | chr1.2:70872085-70872104 | None:intergenic | 45.0% | |
| GACCAAGAGGGTGAATGAAA+AGG | + | chr1.2:70872257-70872276 | MS.gene60694:intron | 45.0% | |
| GGAACTTGACATTGACCAAG+AGG | + | chr1.2:70872244-70872263 | MS.gene60694:intron | 45.0% | |
| GGTAGCATGCTTGCATACAA+GGG | - | chr1.2:70877310-70877329 | None:intergenic | 45.0% | |
| GTGAATGAAAAGGGTAGACC+TGG | + | chr1.2:70872267-70872286 | MS.gene60694:intron | 45.0% | |
| GTTAAATTTAGCACCTGCCC+TGG | - | chr1.2:70875410-70875429 | None:intergenic | 45.0% | |
| GTTTGCCTCCTGGAATAACT+GGG | + | chr1.2:70876013-70876032 | MS.gene60694:CDS | 45.0% | |
| TACTCGAGCCATTCAGTGAA+AGG | - | chr1.2:70872649-70872668 | None:intergenic | 45.0% | |
| TACTGCAAGAACTGCACTTC+AGG | + | chr1.2:70874696-70874715 | MS.gene60694:CDS | 45.0% | |
| TCTGGGTTTGATAGGGAAAG+GGG | + | chr1.2:70875772-70875791 | MS.gene60694:intron | 45.0% | |
| TCTTCATGTCAGTGCTTCGT+TGG | + | chr1.2:70872591-70872610 | MS.gene60694:intron | 45.0% | |
| TGAAGTCTCTGTGAAAGACG+AGG | - | chr1.2:70875146-70875165 | None:intergenic | 45.0% | |
| TGGTTCCATGCTCCTTTAGA+AGG | - | chr1.2:70877206-70877225 | None:intergenic | 45.0% | |
| TGTGCTGTCCTTTCACTGAA+TGG | + | chr1.2:70872638-70872657 | MS.gene60694:intron | 45.0% | |
| TTATGATGGTTGCTGTCAGC+TGG | + | chr1.2:70874823-70874842 | MS.gene60694:CDS | 45.0% | |
| TTGATATCCGACTGGAAGGA+GGG | - | chr1.2:70875504-70875523 | None:intergenic | 45.0% | |
| TTTGTCCCAGTTATTCCAGG+AGG | - | chr1.2:70876021-70876040 | None:intergenic | 45.0% | |
| ! | ACCCTTTTCATTCACCCTCT+TGG | - | chr1.2:70872262-70872281 | None:intergenic | 45.0% |
| ! | AGAGTACCTTATGCTTGGCT+GGG | - | chr1.2:70873200-70873219 | None:intergenic | 45.0% |
| ! | AGGAAGCATGTATGGTGTTC+AGG | + | chr1.2:70875375-70875394 | MS.gene60694:CDS | 45.0% |
| ! | GGAAGCATGTATGGTGTTCA+GGG | + | chr1.2:70875376-70875395 | MS.gene60694:CDS | 45.0% |
| ! | GGTTCCATGCTCCTTTAGAA+GGG | - | chr1.2:70877205-70877224 | None:intergenic | 45.0% |
| ! | GTGGTGTCAATTGGTTCATG+TGG | + | chr1.2:70874263-70874282 | MS.gene60694:intron | 45.0% |
| ! | TCAGTTTGAGACTGAGGATC+AGG | + | chr1.2:70877275-70877294 | MS.gene60694:CDS | 45.0% |
| !! | AAGAGTACCTTATGCTTGGC+TGG | - | chr1.2:70873201-70873220 | None:intergenic | 45.0% |
| !! | CAAGTACTAATGGTGGGTGT+GGG | - | chr1.2:70874006-70874025 | None:intergenic | 45.0% |
| !! | CTGTGTATTGGTTTGGCTTG+TGG | + | chr1.2:70874888-70874907 | MS.gene60694:intron | 45.0% |
| !! | AATAAATAAATAAAATGAAA+TGG | - | chr1.2:70873077-70873096 | None:intergenic | 5.0% |
| !!! | AATTTCTTAATTTATTTTAT+TGG | + | chr1.2:70876625-70876644 | MS.gene60694:intron | 5.0% |
| !!! | ATAAATTATTTTCTTAATTT+TGG | + | chr1.2:70876425-70876444 | MS.gene60694:intron | 5.0% |
| AAGCATGCTACCTCGCTTTC+TGG | + | chr1.2:70877318-70877337 | MS.gene60694:CDS | 50.0% | |
| AAGTCAAGGACGAGGAGATG+AGG | + | chr1.2:70873415-70873434 | MS.gene60694:CDS | 50.0% | |
| AATTACCGAGCCAGAAAGCG+AGG | - | chr1.2:70877331-70877350 | None:intergenic | 50.0% | |
| ACTGTAGATGCCCAATGCTG+CGG | + | chr1.2:70875966-70875985 | MS.gene60694:intron | 50.0% | |
| AGTGATGTCTTGTGGGAGTG+TGG | - | chr1.2:70877166-70877185 | None:intergenic | 50.0% | |
| AGTGTACAGCCAGTTCAGCT+TGG | - | chr1.2:70876273-70876292 | None:intergenic | 50.0% | |
| CCACACCCACCATTAGTACT+TGG | + | chr1.2:70874004-70874023 | MS.gene60694:intron | 50.0% | |
| CCTCAGTCTCAAACTGAACC+AGG | - | chr1.2:70877272-70877291 | None:intergenic | 50.0% | |
| CCTGTTGATATCCGACTGGA+AGG | - | chr1.2:70875508-70875527 | None:intergenic | 50.0% | |
| CCTTCCAGTCGGATATCAAC+AGG | + | chr1.2:70875505-70875524 | MS.gene60694:intron | 50.0% | |
| CGACATTGACACGTTGACAC+CGG | - | chr1.2:70872520-70872539 | None:intergenic | 50.0% | |
| CGTGCTCTATCCCATAACAG+TGG | + | chr1.2:70873762-70873781 | MS.gene60694:CDS | 50.0% | |
| CTCAATGCTGTCCTGCTGTT+TGG | + | chr1.2:70873689-70873708 | MS.gene60694:intron | 50.0% | |
| CTCACCTGTTGATATCCGAC+TGG | - | chr1.2:70875512-70875531 | None:intergenic | 50.0% | |
| CTGGAAGGAGGGGGAAAAAA+CGG | - | chr1.2:70875493-70875512 | None:intergenic | 50.0% | |
| CTGGGTTTGATAGGGAAAGG+GGG | + | chr1.2:70875773-70875792 | MS.gene60694:intron | 50.0% | |
| CTTGGAAACCATCTCCCATC+TGG | - | chr1.2:70876255-70876274 | None:intergenic | 50.0% | |
| GAAACACCCAGCCAAGCATA+AGG | + | chr1.2:70873191-70873210 | MS.gene60694:CDS | 50.0% | |
| GAATGGGAAGAAACAAGGCC+TGG | + | chr1.2:70877251-70877270 | MS.gene60694:CDS | 50.0% | |
| GCACTTATCCAGATGGGAGA+TGG | + | chr1.2:70876244-70876263 | MS.gene60694:CDS | 50.0% | |
| GCCTGCCTTTCTGTTCTGTA+GGG | - | chr1.2:70875182-70875201 | None:intergenic | 50.0% | |
| GGTTTGCCTCCTGGAATAAC+TGG | + | chr1.2:70876012-70876031 | MS.gene60694:CDS | 50.0% | |
| GTCCATGCCAGTGCTTTGTA+GGG | + | chr1.2:70872548-70872567 | MS.gene60694:intron | 50.0% | |
| GTTGATATCCGACTGGAAGG+AGG | - | chr1.2:70875505-70875524 | None:intergenic | 50.0% | |
| TCCATGCCAGTGCTTTGTAG+GGG | + | chr1.2:70872549-70872568 | MS.gene60694:intron | 50.0% | |
| TCCCTACAGAACAGAAAGGC+AGG | + | chr1.2:70875178-70875197 | MS.gene60694:CDS | 50.0% | |
| TGATATCCGACTGGAAGGAG+GGG | - | chr1.2:70875503-70875522 | None:intergenic | 50.0% | |
| TGGGTTTGATAGGGAAAGGG+GGG | + | chr1.2:70875774-70875793 | MS.gene60694:intron | 50.0% | |
| TGTCCATGCCAGTGCTTTGT+AGG | + | chr1.2:70872547-70872566 | MS.gene60694:intron | 50.0% | |
| ! | CAGCTTGGATATGGTGATGC+AGG | + | chr1.2:70875355-70875374 | MS.gene60694:intron | 50.0% |
| ! | CCTGGTTCAGTTTGAGACTG+AGG | + | chr1.2:70877269-70877288 | MS.gene60694:CDS | 50.0% |
| ! | GGTGATGCAGGAAGCATGTA+TGG | + | chr1.2:70875367-70875386 | MS.gene60694:CDS | 50.0% |
| ! | GTAATCACGTGTGTCGGTGT+CGG | - | chr1.2:70872467-70872486 | None:intergenic | 50.0% |
| ! | GTGACCCTTCTAAAGGAGCA+TGG | + | chr1.2:70877198-70877217 | MS.gene60694:CDS | 50.0% |
| ! | TTTTTCCCCCTCCTTCCAGT+CGG | + | chr1.2:70875494-70875513 | MS.gene60694:intron | 50.0% |
| !! | CCAAGTACTAATGGTGGGTG+TGG | - | chr1.2:70874007-70874026 | None:intergenic | 50.0% |
| !! | CGCTTTCTGGCTCGGTAATT+CGG | + | chr1.2:70877331-70877350 | MS.gene60694:CDS | 50.0% |
| !! | TGAGAAGCAGGGAAGTACCT+CGG | - | chr1.2:70872128-70872147 | None:intergenic | 50.0% |
| CAAGGACGAGGAGATGAGGT+TGG | + | chr1.2:70873419-70873438 | MS.gene60694:intron | 55.0% | |
| CACACACCCCTACAAAGCAC+TGG | - | chr1.2:70872558-70872577 | None:intergenic | 55.0% | |
| GAGTGCATGAGCATGGGTGT+GGG | - | chr1.2:70873984-70874003 | None:intergenic | 55.0% | |
| GATATCCGACTGGAAGGAGG+GGG | - | chr1.2:70875502-70875521 | None:intergenic | 55.0% | |
| GGCCTGCCTTTCTGTTCTGT+AGG | - | chr1.2:70875183-70875202 | None:intergenic | 55.0% | |
| GGTTTGGCTGTGCATCCAGA+GGG | - | chr1.2:70873717-70873736 | None:intergenic | 55.0% | |
| TCCAGAGGGTTCCAAACAGC+AGG | - | chr1.2:70873703-70873722 | None:intergenic | 55.0% | |
| TCCCCCAAAAGCAGCTGCAA+TGG | - | chr1.2:70875992-70876011 | None:intergenic | 55.0% | |
| TCGTTGGGGAGCAGCAATAG+CGG | - | chr1.2:70877128-70877147 | None:intergenic | 55.0% | |
| TGTGGGGCACGAAATATCCG+AGG | + | chr1.2:70872108-70872127 | MS.gene60694:CDS | 55.0% | |
| ! | GTGTGGGAGTGCATGAGCAT+GGG | - | chr1.2:70873990-70874009 | None:intergenic | 55.0% |
| ! | TCCTGCTGTTTGGAACCCTC+TGG | + | chr1.2:70873699-70873718 | MS.gene60694:intron | 55.0% |
| !! | ACCCCTACAAAGCACTGGCA+TGG | - | chr1.2:70872553-70872572 | None:intergenic | 55.0% |
| !! | TGCTACCTCGCTTTCTGGCT+CGG | + | chr1.2:70877323-70877342 | MS.gene60694:CDS | 55.0% |
| !! | TGTTCAGGGTTCTGGACCCA+GGG | + | chr1.2:70875390-70875409 | MS.gene60694:CDS | 55.0% |
| !!! | ATTGCAGCTGCTTTTGGGGG+AGG | + | chr1.2:70875991-70876010 | MS.gene60694:CDS | 55.0% |
| !!! | CGGCCATTGCAGCTGCTTTT+GGG | + | chr1.2:70875986-70876005 | MS.gene60694:CDS | 55.0% |
| !!! | GCCATTGCAGCTGCTTTTGG+GGG | + | chr1.2:70875988-70876007 | MS.gene60694:CDS | 55.0% |
| !!! | GGCCATTGCAGCTGCTTTTG+GGG | + | chr1.2:70875987-70876006 | MS.gene60694:CDS | 55.0% |
| AGCTGCAATGGCCGCAGCAT+TGG | - | chr1.2:70875980-70875999 | None:intergenic | 60.0% | |
| GCTGCAATGGCCGCAGCATT+GGG | - | chr1.2:70875979-70875998 | None:intergenic | 60.0% | |
| GGAGTGCATGAGCATGGGTG+TGG | - | chr1.2:70873985-70874004 | None:intergenic | 60.0% | |
| TTTGGGGGAGGTTTGCCTCC+TGG | + | chr1.2:70876003-70876022 | MS.gene60694:CDS | 60.0% | |
| ! | CGGTTTGGCTGTGCATCCAG+AGG | - | chr1.2:70873718-70873737 | None:intergenic | 60.0% |
| ! | GGTGTGGGAGTGCATGAGCA+TGG | - | chr1.2:70873991-70874010 | None:intergenic | 60.0% |
| !! | GCGGCCATTGCAGCTGCTTT+TGG | + | chr1.2:70875985-70876004 | MS.gene60694:CDS | 60.0% |
| !! | GTGTTCAGGGTTCTGGACCC+AGG | + | chr1.2:70875389-70875408 | MS.gene60694:CDS | 60.0% |
| !! | GTCGGTGTCGGACACCAGCA+CGG | - | chr1.2:70872455-70872474 | None:intergenic | 65.0% |
| !! | CAGGGTTCTGGACCCAGGGC+AGG | + | chr1.2:70875394-70875413 | MS.gene60694:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 70872073 | 70877383 | 70872073 | ID=MS.gene60694 |
| chr1.2 | mRNA | 70872073 | 70877383 | 70872073 | ID=MS.gene60694.t1;Parent=MS.gene60694 |
| chr1.2 | exon | 70872073 | 70872129 | 70872073 | ID=MS.gene60694.t1.exon1;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70872073 | 70872129 | 70872073 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70872943 | 70873014 | 70872943 | ID=MS.gene60694.t1.exon2;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70872943 | 70873014 | 70872943 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70873136 | 70873212 | 70873136 | ID=MS.gene60694.t1.exon3;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70873136 | 70873212 | 70873136 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70873358 | 70873436 | 70873358 | ID=MS.gene60694.t1.exon4;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70873358 | 70873436 | 70873358 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70873730 | 70873853 | 70873730 | ID=MS.gene60694.t1.exon5;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70873730 | 70873853 | 70873730 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70874653 | 70874717 | 70874653 | ID=MS.gene60694.t1.exon6;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70874653 | 70874717 | 70874653 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70874812 | 70874861 | 70874812 | ID=MS.gene60694.t1.exon7;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70874812 | 70874861 | 70874812 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70875030 | 70875071 | 70875030 | ID=MS.gene60694.t1.exon8;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70875030 | 70875071 | 70875030 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70875158 | 70875209 | 70875158 | ID=MS.gene60694.t1.exon9;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70875158 | 70875209 | 70875158 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70875358 | 70875415 | 70875358 | ID=MS.gene60694.t1.exon10;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70875358 | 70875415 | 70875358 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70875513 | 70875526 | 70875513 | ID=MS.gene60694.t1.exon11;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70875513 | 70875526 | 70875513 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70875973 | 70876080 | 70875973 | ID=MS.gene60694.t1.exon12;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70875973 | 70876080 | 70875973 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70876157 | 70876300 | 70876157 | ID=MS.gene60694.t1.exon13;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70876157 | 70876300 | 70876157 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| chr1.2 | exon | 70876994 | 70877383 | 70876994 | ID=MS.gene60694.t1.exon14;Parent=MS.gene60694.t1 |
| chr1.2 | CDS | 70876994 | 70877383 | 70876994 | ID=cds.MS.gene60694.t1;Parent=MS.gene60694.t1 |
| Gene Sequence |
| Protein sequence |
