Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60922.t1 | XP_003595882.1 | 98 | 253 | 5 | 0 | 1 | 253 | 1 | 253 | 3.50E-139 | 504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60922.t1 | Q84JC0 | 70.0 | 233 | 70 | 0 | 21 | 253 | 55 | 287 | 7.2e-93 | 341.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60922.t1 | G7IT40 | 98.0 | 253 | 5 | 0 | 1 | 253 | 1 | 253 | 2.5e-139 | 504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07616 | MS.gene60922 | PPI |
| MS.gene066535 | MS.gene60922 | PPI |
| MS.gene60922 | MS.gene29298 | PPI |
| MS.gene60922 | MS.gene066536 | PPI |
| MS.gene60922 | MS.gene072431 | PPI |
| MS.gene78323 | MS.gene60922 | PPI |
| MS.gene29299 | MS.gene60922 | PPI |
| MS.gene072433 | MS.gene60922 | PPI |
| MS.gene066537 | MS.gene60922 | PPI |
| MS.gene60922 | MS.gene067809 | PPI |
| MS.gene08205 | MS.gene60922 | PPI |
| MS.gene60922 | MS.gene29300 | PPI |
| MS.gene60922 | MS.gene072432 | PPI |
| MS.gene51868 | MS.gene60922 | PPI |
| MS.gene78322 | MS.gene60922 | PPI |
| MS.gene60922 | MS.gene78324 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60922.t1 | MTR_2g062880 | 98.024 | 253 | 5 | 0 | 1 | 253 | 1 | 253 | 0.0 | 518 |
| MS.gene60922.t1 | MTR_7g033530 | 96.471 | 255 | 6 | 2 | 1 | 253 | 1 | 254 | 0.0 | 503 |
| MS.gene60922.t1 | MTR_2g062880 | 97.990 | 199 | 4 | 0 | 55 | 253 | 14 | 212 | 2.03e-147 | 410 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60922.t1 | AT5G40530 | 67.200 | 250 | 82 | 0 | 4 | 253 | 38 | 287 | 7.77e-125 | 356 |
| MS.gene60922.t1 | AT5G40530 | 61.538 | 273 | 82 | 1 | 4 | 253 | 38 | 310 | 9.73e-120 | 344 |
| MS.gene60922.t1 | AT5G40530 | 67.401 | 227 | 74 | 0 | 4 | 230 | 38 | 264 | 1.31e-112 | 325 |
| MS.gene60922.t1 | AT5G40530 | 61.200 | 250 | 74 | 1 | 4 | 230 | 38 | 287 | 2.52e-107 | 312 |
Find 46 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGTATTCTTCACGCTTT+TGG | 0.220786 | 2.4:-31044429 | None:intergenic |
| GGGTCTGCTCCTCCAGTATT+TGG | 0.244179 | 2.4:-31045520 | None:intergenic |
| GAATTAGCTACATACCTTCT+TGG | 0.265342 | 2.4:-31045952 | None:intergenic |
| ATTGCATTTGAAAACTTCTC+TGG | 0.300209 | 2.4:-31045541 | None:intergenic |
| CACTTAATAATTACATTAAC+CGG | 0.356736 | 2.4:-31044244 | None:intergenic |
| TTGAAGAAAGCTGGAAGGTT+TGG | 0.370149 | 2.4:-31040022 | None:intergenic |
| AGCAATTACATCGGGATCAT+TGG | 0.385194 | 2.4:-31044471 | None:intergenic |
| ATTACATTAACCGGCTGTTC+CGG | 0.388223 | 2.4:-31044235 | None:intergenic |
| TGTATTCTGTCTATCATTGA+TGG | 0.393290 | 2.4:+31045318 | MS.gene60922:CDS |
| AGCAGATTTGATCCAAATAC+TGG | 0.399772 | 2.4:+31045508 | MS.gene60922:CDS |
| ACCTTCCAGCTTTCTTCAAA+AGG | 0.403829 | 2.4:+31040026 | MS.gene60922:CDS |
| AGGAAAAGCAAAATTCTAAA+AGG | 0.407813 | 2.4:+31046036 | MS.gene60922:intron |
| ACAAAACGCAAATGTCAAAC+TGG | 0.425113 | 2.4:+31044212 | MS.gene60922:CDS |
| TCAAATGCAATTTCTGAGCT+AGG | 0.433269 | 2.4:+31045553 | MS.gene60922:CDS |
| TAGGATTTAACTCCGTGAAA+AGG | 0.438280 | 2.4:+31045572 | MS.gene60922:CDS |
| GTCAAACTGGCCGGAACAGC+CGG | 0.447688 | 2.4:+31044225 | MS.gene60922:CDS |
| GCATGCAGGGTGCTTAAGCC+AGG | 0.448146 | 2.4:+31045370 | MS.gene60922:CDS |
| CAGATGCGAGCGAGGTTGTC+TGG | 0.466388 | 2.4:+31040123 | MS.gene60922:intron |
| TTGCATTTGAAAACTTCTCT+GGG | 0.470060 | 2.4:-31045540 | None:intergenic |
| TAAATAGAGACGAATCTTCA+CGG | 0.482107 | 2.4:-31043907 | None:intergenic |
| CTTATCTTGAAGAAGCATGC+AGG | 0.493870 | 2.4:+31045356 | MS.gene60922:CDS |
| GAAGGTTTGGCATTAGAAGC+TGG | 0.494436 | 2.4:-31040009 | None:intergenic |
| AGGATTTAACTCCGTGAAAA+GGG | 0.495117 | 2.4:+31045573 | MS.gene60922:CDS |
| AGATTCGTCTCTATTTAACT+TGG | 0.497191 | 2.4:+31043913 | MS.gene60922:CDS |
| CGGTTAATGTAATTATTAAG+TGG | 0.502844 | 2.4:+31044245 | MS.gene60922:CDS |
| AAATCAGCAACAACAAAAGA+AGG | 0.533656 | 2.4:-31044283 | None:intergenic |
| TTTGTTTCACTTCACCAAGA+AGG | 0.533778 | 2.4:+31045938 | MS.gene60922:CDS |
| ATGTCACAAGCAATTACATC+GGG | 0.534279 | 2.4:-31044479 | None:intergenic |
| TACAAACAAGGTTTAAGTGA+TGG | 0.537110 | 2.4:-31046074 | None:intergenic |
| CTAAAAGGAAGGAAATTGAA+TGG | 0.548419 | 2.4:+31046051 | MS.gene60922:CDS |
| GTATTCTGTCTATCATTGAT+GGG | 0.554551 | 2.4:+31045319 | MS.gene60922:CDS |
| AAAGCAAAATTCTAAAAGGA+AGG | 0.555499 | 2.4:+31046040 | MS.gene60922:CDS |
| TTATTTGGATAGTATCATGC+AGG | 0.558643 | 2.4:+31044187 | MS.gene60922:intron |
| AACGCAAATGTCAAACTGGC+CGG | 0.561752 | 2.4:+31044216 | MS.gene60922:CDS |
| CAACGGCGCTTGTACAAACA+AGG | 0.570819 | 2.4:-31046086 | None:intergenic |
| AATTACTTGCAGACTCCACT+AGG | 0.573727 | 2.4:+31045274 | MS.gene60922:intron |
| TGTTTGTACAAGCGCCGTTG+AGG | 0.590306 | 2.4:+31046089 | MS.gene60922:CDS |
| CATCGGGATCATTGGAGACA+AGG | 0.592419 | 2.4:-31044463 | None:intergenic |
| ATGCGAGCGAGGTTGTCTGG+TGG | 0.605613 | 2.4:+31040126 | MS.gene60922:CDS |
| TTATCTTGAAGAAGCATGCA+GGG | 0.613987 | 2.4:+31045357 | MS.gene60922:CDS |
| CGATGTAATTGCTTGTGACA+TGG | 0.622539 | 2.4:+31044481 | MS.gene60922:CDS |
| CATGTCACAAGCAATTACAT+CGG | 0.641103 | 2.4:-31044480 | None:intergenic |
| CATGCAGGGTGCTTAAGCCA+GGG | 0.653311 | 2.4:+31045371 | MS.gene60922:CDS |
| TCGGCAGATGCAGAACCTAG+TGG | 0.657103 | 2.4:-31045289 | None:intergenic |
| TAGACAGAATACAGCAACAT+CGG | 0.661555 | 2.4:-31045308 | None:intergenic |
| AGATTTGATCCAAATACTGG+AGG | 0.710766 | 2.4:+31045511 | MS.gene60922:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATATATTTTTTTTTTTTC+TGG | + | chr2.4:31042957-31042976 | MS.gene60922:intron | 10.0% |
| !! | AAAATAAAACACAATCATAA+AGG | - | chr2.4:31041959-31041978 | None:intergenic | 15.0% |
| !! | AATATAGTTGAAGTAATATA+TGG | + | chr2.4:31043460-31043479 | MS.gene60922:intron | 15.0% |
| !! | AATCCAATACATATATATTA+AGG | - | chr2.4:31045868-31045887 | None:intergenic | 15.0% |
| !! | ATCCAATACATATATATTAA+GGG | - | chr2.4:31045867-31045886 | None:intergenic | 15.0% |
| !! | TATATTACTTCAACTATATT+TGG | - | chr2.4:31043460-31043479 | None:intergenic | 15.0% |
| !! | TTGATGAATATAATAAAATG+AGG | + | chr2.4:31040379-31040398 | MS.gene60922:intron | 15.0% |
| !!! | ATTTTAAATAAAGTGAAAGT+TGG | + | chr2.4:31043239-31043258 | MS.gene60922:intron | 15.0% |
| !!! | TTCATGTACTTAAATTTTTA+CGG | - | chr2.4:31045152-31045171 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTTTTGTAGATT+CGG | + | chr2.4:31043394-31043413 | MS.gene60922:intron | 15.0% |
| !!! | TTTTAAATAAAGTGAAAGTT+GGG | + | chr2.4:31043240-31043259 | MS.gene60922:intron | 15.0% |
| !! | AAAATCGATGAAAAAAATGT+TGG | + | chr2.4:31041715-31041734 | MS.gene60922:intron | 20.0% |
| !! | ATAACTTAGCTTATATTCAT+AGG | + | chr2.4:31040289-31040308 | MS.gene60922:intron | 20.0% |
| !! | ATCATTACAATACATGTTAA+TGG | - | chr2.4:31044133-31044152 | None:intergenic | 20.0% |
| !! | CAAAATACATAAAACAGTTT+AGG | - | chr2.4:31043805-31043824 | None:intergenic | 20.0% |
| !! | CAGTTATATCAAAAACAAAT+TGG | + | chr2.4:31044619-31044638 | MS.gene60922:intron | 20.0% |
| !! | TCAATTTCAAATGCTAAAAA+CGG | - | chr2.4:31042069-31042088 | None:intergenic | 20.0% |
| !! | TCAGATAGTAGAAATTAAAA+TGG | - | chr2.4:31041369-31041388 | None:intergenic | 20.0% |
| !! | TCCAATACATATATATTAAG+GGG | - | chr2.4:31045866-31045885 | None:intergenic | 20.0% |
| !! | TGAACATACAATCTTATATT+TGG | + | chr2.4:31043535-31043554 | MS.gene60922:intron | 20.0% |
| !! | TGCAAATTGATGAAAAAAAA+TGG | - | chr2.4:31042568-31042587 | None:intergenic | 20.0% |
| !! | TGTGATAATTTAGTAGTTAA+TGG | - | chr2.4:31042472-31042491 | None:intergenic | 20.0% |
| !! | TTAACATGTATTGTAATGAT+TGG | + | chr2.4:31044133-31044152 | MS.gene60922:intron | 20.0% |
| !! | TTATTTCCTTCAACATATAA+AGG | - | chr2.4:31045047-31045066 | None:intergenic | 20.0% |
| !!! | AAATACGTCTAATGTTTTTA+TGG | + | chr2.4:31040652-31040671 | MS.gene60922:intron | 20.0% |
| !!! | AATACGTCTAATGTTTTTAT+GGG | + | chr2.4:31040653-31040672 | MS.gene60922:intron | 20.0% |
| !!! | AGTTTCAATATTGATTTGTT+GGG | + | chr2.4:31040084-31040103 | MS.gene60922:intron | 20.0% |
| !!! | ATAATATTTGAAGCACATAA+TGG | + | chr2.4:31045179-31045198 | MS.gene60922:intron | 20.0% |
| !!! | ATTCTTGTCTTTTTTTGTTT+TGG | + | chr2.4:31040204-31040223 | MS.gene60922:intron | 20.0% |
| !!! | GAAATTAAAGATTCTTTTTC+AGG | + | chr2.4:31042911-31042930 | MS.gene60922:intron | 20.0% |
| !!! | GAAGTAGTTTTTAAAATCAT+TGG | - | chr2.4:31040535-31040554 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTTTGTAGATTC+GGG | + | chr2.4:31043395-31043414 | MS.gene60922:intron | 20.0% |
| !!! | TTGTTTTTTCTTTTCTTTTC+TGG | - | chr2.4:31041280-31041299 | None:intergenic | 20.0% |
| ! | AAGCTAAGTTATCTATGAAT+TGG | - | chr2.4:31040281-31040300 | None:intergenic | 25.0% |
| ! | ACTTCTTTCTTTATGTAGTT+TGG | + | chr2.4:31043632-31043651 | MS.gene60922:intron | 25.0% |
| ! | AGGAAAAGCAAAATTCTAAA+AGG | + | chr2.4:31046036-31046055 | MS.gene60922:intron | 25.0% |
| ! | AGGGTAAAATAGAAGAAAAA+AGG | + | chr2.4:31045821-31045840 | MS.gene60922:intron | 25.0% |
| ! | AGTTGAAAATAGCTGAAATA+GGG | - | chr2.4:31042809-31042828 | None:intergenic | 25.0% |
| ! | ATATTACAAAACTGATGCAA+CGG | + | chr2.4:31044730-31044749 | MS.gene60922:intron | 25.0% |
| ! | ATTGAGTGAAAGTAAATGAA+GGG | + | chr2.4:31045802-31045821 | MS.gene60922:intron | 25.0% |
| ! | CAAAATTCAGATTAAGACTT+AGG | + | chr2.4:31040232-31040251 | MS.gene60922:intron | 25.0% |
| ! | CTTCTTTCTTTATGTAGTTT+GGG | + | chr2.4:31043633-31043652 | MS.gene60922:intron | 25.0% |
| ! | GTGAAATAAACACCAAAATA+AGG | - | chr2.4:31044655-31044674 | None:intergenic | 25.0% |
| ! | GTTAATTACATAAGAACGAA+AGG | + | chr2.4:31040463-31040482 | MS.gene60922:intron | 25.0% |
| ! | TAAAAACTACTTCCAAACAT+AGG | + | chr2.4:31040542-31040561 | MS.gene60922:intron | 25.0% |
| ! | TAATCTGCTATTGATAAAAC+TGG | - | chr2.4:31044769-31044788 | None:intergenic | 25.0% |
| ! | TATTCCACGAAAAATTTAGA+GGG | + | chr2.4:31043168-31043187 | MS.gene60922:intron | 25.0% |
| ! | TATTTATAGAGGCAATGAAA+TGG | - | chr2.4:31045611-31045630 | None:intergenic | 25.0% |
| ! | TCCCCTTAATATATATGTAT+TGG | + | chr2.4:31045862-31045881 | MS.gene60922:intron | 25.0% |
| ! | TGGAAAAAATAGAGAACATT+GGG | + | chr2.4:31040793-31040812 | MS.gene60922:intron | 25.0% |
| ! | TTACGTTAGAAGTTAAAGTA+CGG | + | chr2.4:31043120-31043139 | MS.gene60922:intron | 25.0% |
| ! | TTAGTTTATCCAGTATCAAT+TGG | - | chr2.4:31040327-31040346 | None:intergenic | 25.0% |
| ! | TTATTCCACGAAAAATTTAG+AGG | + | chr2.4:31043167-31043186 | MS.gene60922:intron | 25.0% |
| ! | TTGGAAAAAATAGAGAACAT+TGG | + | chr2.4:31040792-31040811 | MS.gene60922:intron | 25.0% |
| ! | TTGTAATATACTAGCAGAAA+CGG | - | chr2.4:31044719-31044738 | None:intergenic | 25.0% |
| ! | TTTCTCTGATTGAAATTATG+AGG | + | chr2.4:31042619-31042638 | MS.gene60922:intron | 25.0% |
| !! | AAAGCAAAATTCTAAAAGGA+AGG | + | chr2.4:31046040-31046059 | MS.gene60922:CDS | 25.0% |
| !! | AACAAATTTTCCTTTTCAAC+CGG | + | chr2.4:31045412-31045431 | MS.gene60922:intron | 25.0% |
| !! | ATTAAGGGGATACTTAATTT+TGG | - | chr2.4:31045852-31045871 | None:intergenic | 25.0% |
| !! | GTTTTATCAATAGCAGATTA+TGG | + | chr2.4:31044769-31044788 | MS.gene60922:intron | 25.0% |
| !! | TGGTCATCTCAATTTTTATT+TGG | + | chr2.4:31044172-31044191 | MS.gene60922:intron | 25.0% |
| !!! | ATGAGTATGATGATTTTTTC+TGG | - | chr2.4:31041344-31041363 | None:intergenic | 25.0% |
| !!! | ATTTTGCTTTTTTCTTGTGT+AGG | + | chr2.4:31046016-31046035 | MS.gene60922:intron | 25.0% |
| !!! | ATTTTGGTGTTTATTTCACT+AGG | + | chr2.4:31044656-31044675 | MS.gene60922:intron | 25.0% |
| !!! | CTTGAGATTTTTTTTGTCTA+TGG | - | chr2.4:31042243-31042262 | None:intergenic | 25.0% |
| !!! | CTTGCTTGTAATTCTTTTTT+GGG | + | chr2.4:31043827-31043846 | MS.gene60922:intron | 25.0% |
| !!! | GAGTTTCAATATTGATTTGT+TGG | + | chr2.4:31040083-31040102 | MS.gene60922:intron | 25.0% |
| !!! | GGTTTTTTTTTGCCTTATTT+TGG | + | chr2.4:31044640-31044659 | MS.gene60922:intron | 25.0% |
| !!! | TCTTGCTTGTAATTCTTTTT+TGG | + | chr2.4:31043826-31043845 | MS.gene60922:intron | 25.0% |
| !!! | TGAGTATGATGATTTTTTCT+GGG | - | chr2.4:31041343-31041362 | None:intergenic | 25.0% |
| !!! | TTCTTTTTCAGGTTTAAAGA+TGG | + | chr2.4:31042922-31042941 | MS.gene60922:intron | 25.0% |
| !!! | TTGGAATTGCTCATTTTTAT+TGG | + | chr2.4:31044152-31044171 | MS.gene60922:intron | 25.0% |
| !!! | TTTTGGTGTTTATTTCACTA+GGG | + | chr2.4:31044657-31044676 | MS.gene60922:intron | 25.0% |
| AAAAAATAGAGAACATTGGG+AGG | + | chr2.4:31040796-31040815 | MS.gene60922:intron | 30.0% | |
| AAAAATAGAGAACATTGGGA+GGG | + | chr2.4:31040797-31040816 | MS.gene60922:intron | 30.0% | |
| AAATCAGCAACAACAAAAGA+AGG | - | chr2.4:31044286-31044305 | None:intergenic | 30.0% | |
| AACAAAAAACGAAAGAGACA+AGG | + | chr2.4:31039955-31039974 | MS.gene60922:CDS | 30.0% | |
| AACAATCTGCCATATAAACA+CGG | + | chr2.4:31044801-31044820 | MS.gene60922:intron | 30.0% | |
| AATACAATTCTCTCCTCATT+TGG | + | chr2.4:31040849-31040868 | MS.gene60922:intron | 30.0% | |
| AATAGTGTTTGAATCTCTGT+TGG | + | chr2.4:31041477-31041496 | MS.gene60922:intron | 30.0% | |
| AATTAGGGACAGAAAAGTTT+AGG | - | chr2.4:31040704-31040723 | None:intergenic | 30.0% | |
| ACTAATAAGCCAATTGATAC+TGG | + | chr2.4:31040315-31040334 | MS.gene60922:intron | 30.0% | |
| AGATTCGTCTCTATTTAACT+TGG | + | chr2.4:31043913-31043932 | MS.gene60922:CDS | 30.0% | |
| AGTCATTAAAATTGTCCACA+TGG | - | chr2.4:31041144-31041163 | None:intergenic | 30.0% | |
| AGTTTAGGAAGTCTAGTTAT+AGG | - | chr2.4:31043790-31043809 | None:intergenic | 30.0% | |
| ATACAATTCTCTCCTCATTT+GGG | + | chr2.4:31040850-31040869 | MS.gene60922:intron | 30.0% | |
| ATATTTCACAACACTACTTG+TGG | + | chr2.4:31044919-31044938 | MS.gene60922:intron | 30.0% | |
| ATTAAAGATGGGCAAAGAAA+TGG | + | chr2.4:31041903-31041922 | MS.gene60922:intron | 30.0% | |
| ATTAAGACTTAGGTTCTGTT+TGG | + | chr2.4:31040242-31040261 | MS.gene60922:intron | 30.0% | |
| ATTGCATTTGAAAACTTCTC+TGG | - | chr2.4:31045544-31045563 | None:intergenic | 30.0% | |
| ATTTCAACTATTTACGACTG+AGG | - | chr2.4:31041460-31041479 | None:intergenic | 30.0% | |
| CAAAAATTGTCAAACGCAAA+TGG | + | chr2.4:31040590-31040609 | MS.gene60922:intron | 30.0% | |
| CAAATGGTATAACTAGTATG+TGG | + | chr2.4:31040606-31040625 | MS.gene60922:intron | 30.0% | |
| CAACTGAGATTTGTGAAATA+GGG | + | chr2.4:31041545-31041564 | MS.gene60922:intron | 30.0% | |
| CAAGAAAATGATACGTTGTT+AGG | + | chr2.4:31043426-31043445 | MS.gene60922:intron | 30.0% | |
| CACATTAGTGAAATCATGAA+AGG | + | chr2.4:31045010-31045029 | MS.gene60922:intron | 30.0% | |
| CAGTTGAAAATAGCTGAAAT+AGG | - | chr2.4:31042810-31042829 | None:intergenic | 30.0% | |
| CATCAATTTGCATGTAATCT+TGG | + | chr2.4:31042576-31042595 | MS.gene60922:intron | 30.0% | |
| CCAAAGTTACTTAACTAGAA+TGG | - | chr2.4:31045087-31045106 | None:intergenic | 30.0% | |
| CTAAAAGGAAGGAAATTGAA+TGG | + | chr2.4:31046051-31046070 | MS.gene60922:CDS | 30.0% | |
| GACAAAAATTATGAGTTGCT+TGG | - | chr2.4:31044053-31044072 | None:intergenic | 30.0% | |
| GATTGAGTGAAAGTAAATGA+AGG | + | chr2.4:31045801-31045820 | MS.gene60922:intron | 30.0% | |
| GCAATGATGAAAATGAAACA+CGG | + | chr2.4:31042308-31042327 | MS.gene60922:intron | 30.0% | |
| GTATTCTGTCTATCATTGAT+GGG | + | chr2.4:31045319-31045338 | MS.gene60922:CDS | 30.0% | |
| GTGAAAGTTGGGATATTTAT+AGG | + | chr2.4:31043198-31043217 | MS.gene60922:intron | 30.0% | |
| TAAAAGCTGTACTTCAAGTA+AGG | - | chr2.4:31044981-31045000 | None:intergenic | 30.0% | |
| TAAATAGAGACGAATCTTCA+CGG | - | chr2.4:31043910-31043929 | None:intergenic | 30.0% | |
| TACAAACAAGGTTTAAGTGA+TGG | - | chr2.4:31046077-31046096 | None:intergenic | 30.0% | |
| TACCTCTTGGTCATTAAAAT+TGG | + | chr2.4:31043074-31043093 | MS.gene60922:intron | 30.0% | |
| TACGTTAGAAGTTAAAGTAC+GGG | + | chr2.4:31043121-31043140 | MS.gene60922:intron | 30.0% | |
| TAGAATAAAAACACATACCC+TGG | - | chr2.4:31045391-31045410 | None:intergenic | 30.0% | |
| TGCTATAAGTTAATGAGAGA+AGG | + | chr2.4:31043489-31043508 | MS.gene60922:intron | 30.0% | |
| TGGATTCCTTTATATGTTGA+AGG | + | chr2.4:31045038-31045057 | MS.gene60922:intron | 30.0% | |
| TGTATTCTGTCTATCATTGA+TGG | + | chr2.4:31045318-31045337 | MS.gene60922:CDS | 30.0% | |
| TTAGTTGGATTACTTACAAG+AGG | + | chr2.4:31045234-31045253 | MS.gene60922:intron | 30.0% | |
| TTATCAATAGCAGATTATGG+CGG | + | chr2.4:31044772-31044791 | MS.gene60922:intron | 30.0% | |
| TTATTTGGATAGTATCATGC+AGG | + | chr2.4:31044187-31044206 | MS.gene60922:intron | 30.0% | |
| TTGCATTTGAAAACTTCTCT+GGG | - | chr2.4:31045543-31045562 | None:intergenic | 30.0% | |
| TTGTGAAATATTCACCATAG+CGG | - | chr2.4:31044910-31044929 | None:intergenic | 30.0% | |
| TTTAACGAAAAACACGTTGA+TGG | - | chr2.4:31043340-31043359 | None:intergenic | 30.0% | |
| ! | AAAACCTTCTCCTAGATTTT+TGG | + | chr2.4:31042400-31042419 | MS.gene60922:intron | 30.0% |
| ! | AAATTAAGGAGTGGGATTTT+CGG | + | chr2.4:31041879-31041898 | MS.gene60922:intron | 30.0% |
| ! | AACTTTTCTGTCCCTAATTT+TGG | + | chr2.4:31040705-31040724 | MS.gene60922:intron | 30.0% |
| ! | AATAGTGGGAACCAAAATTA+GGG | - | chr2.4:31040719-31040738 | None:intergenic | 30.0% |
| ! | ACAAATTTTCCTTTTCAACC+GGG | + | chr2.4:31045413-31045432 | MS.gene60922:intron | 30.0% |
| ! | CCATTCTAGTTAAGTAACTT+TGG | + | chr2.4:31045084-31045103 | MS.gene60922:intron | 30.0% |
| ! | CGTGTTTTTCGTTAAACTAT+TGG | + | chr2.4:31043344-31043363 | MS.gene60922:intron | 30.0% |
| ! | GAGAAGAGAACTATTTCTTT+GGG | + | chr2.4:31042362-31042381 | MS.gene60922:intron | 30.0% |
| ! | GGATTTTCGGTATTAAAGAT+GGG | + | chr2.4:31041892-31041911 | MS.gene60922:intron | 30.0% |
| ! | TAATAGTGGGAACCAAAATT+AGG | - | chr2.4:31040720-31040739 | None:intergenic | 30.0% |
| ! | TACTTGAAGTACAGCTTTTA+TGG | + | chr2.4:31044981-31045000 | MS.gene60922:intron | 30.0% |
| ! | TATTTACGACTGAGGTTTTT+GGG | - | chr2.4:31041452-31041471 | None:intergenic | 30.0% |
| ! | TATTTTCAACTGAGGTTTCT+GGG | + | chr2.4:31042818-31042837 | MS.gene60922:intron | 30.0% |
| ! | TCTCTGTTGGTTACTAAAAA+TGG | + | chr2.4:31041490-31041509 | MS.gene60922:intron | 30.0% |
| ! | TGAGAAGAGAACTATTTCTT+TGG | + | chr2.4:31042361-31042380 | MS.gene60922:intron | 30.0% |
| ! | TTTCTCTTGTCGAAATTTTG+AGG | - | chr2.4:31041652-31041671 | None:intergenic | 30.0% |
| !! | ATGTGGACAATTTTAATGAC+TGG | + | chr2.4:31041143-31041162 | MS.gene60922:intron | 30.0% |
| !! | ATTTCAGCTATTTTCAACTG+AGG | + | chr2.4:31042810-31042829 | MS.gene60922:intron | 30.0% |
| !! | GTCTCTATTTAACTTGGTAA+GGG | + | chr2.4:31043919-31043938 | MS.gene60922:intron | 30.0% |
| !! | TACATGTTAATGGACTAATG+TGG | - | chr2.4:31044123-31044142 | None:intergenic | 30.0% |
| !!! | AGGAATTGTCATTTTTTCAG+TGG | + | chr2.4:31043863-31043882 | MS.gene60922:intron | 30.0% |
| !!! | TCTTTTGTTGTTGCTGATTT+TGG | + | chr2.4:31044286-31044305 | MS.gene60922:CDS | 30.0% |
| !!! | TTGTCATTTTTTCAGTGGAA+AGG | + | chr2.4:31043868-31043887 | MS.gene60922:intron | 30.0% |
| !!! | TTTTGGAATGAGATGATGAT+AGG | + | chr2.4:31042864-31042883 | MS.gene60922:intron | 30.0% |
| !!! | TTTTGGGTTGACAAGATTTA+AGG | + | chr2.4:31043843-31043862 | MS.gene60922:intron | 30.0% |
| AAAATAGAGAACATTGGGAG+GGG | + | chr2.4:31040798-31040817 | MS.gene60922:intron | 35.0% | |
| AAGATGAATGAGGATGATGA+TGG | - | chr2.4:31042102-31042121 | None:intergenic | 35.0% | |
| AATAGGGTTTGAATCTCTGT+CGG | - | chr2.4:31042793-31042812 | None:intergenic | 35.0% | |
| AATATATCTCATACTGCCCA+CGG | - | chr2.4:31041188-31041207 | None:intergenic | 35.0% | |
| AATGCTGCATCCAAAAATCT+AGG | - | chr2.4:31042413-31042432 | None:intergenic | 35.0% | |
| ACAAAACGCAAATGTCAAAC+TGG | + | chr2.4:31044212-31044231 | MS.gene60922:CDS | 35.0% | |
| ACGTTAGAAGTTAAAGTACG+GGG | + | chr2.4:31043122-31043141 | MS.gene60922:intron | 35.0% | |
| AGATTTGATCCAAATACTGG+AGG | + | chr2.4:31045511-31045530 | MS.gene60922:CDS | 35.0% | |
| AGCAGATTTGATCCAAATAC+TGG | + | chr2.4:31045508-31045527 | MS.gene60922:CDS | 35.0% | |
| AGGATTTAACTCCGTGAAAA+GGG | + | chr2.4:31045573-31045592 | MS.gene60922:CDS | 35.0% | |
| AGGGACTAAAAGTGAAAGTT+GGG | + | chr2.4:31043187-31043206 | MS.gene60922:intron | 35.0% | |
| ATGCATGTGTAGACAATATG+AGG | - | chr2.4:31042755-31042774 | None:intergenic | 35.0% | |
| ATGTAGTTTGGGCAATGAAT+TGG | + | chr2.4:31043644-31043663 | MS.gene60922:intron | 35.0% | |
| ATGTCACAAGCAATTACATC+GGG | - | chr2.4:31044482-31044501 | None:intergenic | 35.0% | |
| CATGTCACAAGCAATTACAT+CGG | - | chr2.4:31044483-31044502 | None:intergenic | 35.0% | |
| CCAACTGAGATTTGTGAAAT+AGG | + | chr2.4:31041544-31041563 | MS.gene60922:intron | 35.0% | |
| CCTATTTCACAAATCTCAGT+TGG | - | chr2.4:31041547-31041566 | None:intergenic | 35.0% | |
| CGAGTTAAACATGTAACTGA+AGG | + | chr2.4:31044009-31044028 | MS.gene60922:intron | 35.0% | |
| GAACCTCTCAATTTCATCTA+AGG | - | chr2.4:31043606-31043625 | None:intergenic | 35.0% | |
| GAACTCAAGATTTGTATTGG+AGG | + | chr2.4:31040874-31040893 | MS.gene60922:intron | 35.0% | |
| GAATTAGCTACATACCTTCT+TGG | - | chr2.4:31045955-31045974 | None:intergenic | 35.0% | |
| GACTAATGTGGAAGAAGATA+TGG | - | chr2.4:31044111-31044130 | None:intergenic | 35.0% | |
| GAGATTCATGAATTAGCGTT+TGG | - | chr2.4:31042720-31042739 | None:intergenic | 35.0% | |
| GAGATTTGTGAAATAGGGTT+TGG | + | chr2.4:31041550-31041569 | MS.gene60922:intron | 35.0% | |
| GATTGAAAGAGAGAAACTAC+AGG | - | chr2.4:31041430-31041449 | None:intergenic | 35.0% | |
| GATTGAAAGAGAGAAGGAAT+AGG | + | chr2.4:31042840-31042859 | MS.gene60922:intron | 35.0% | |
| GGTAATGCATCGGAAAATTA+AGG | + | chr2.4:31041865-31041884 | MS.gene60922:intron | 35.0% | |
| GTAAGGCACATTATTTGACT+AGG | - | chr2.4:31044964-31044983 | None:intergenic | 35.0% | |
| GTGTTTATATGGCAGATTGT+TGG | - | chr2.4:31044802-31044821 | None:intergenic | 35.0% | |
| TACAATTCTCTCCTCATTTG+GGG | + | chr2.4:31040851-31040870 | MS.gene60922:intron | 35.0% | |
| TACTGATGTTTAATCCTTGC+AGG | + | chr2.4:31045893-31045912 | MS.gene60922:intron | 35.0% | |
| TAGACAGAATACAGCAACAT+CGG | - | chr2.4:31045311-31045330 | None:intergenic | 35.0% | |
| TAGGATTTAACTCCGTGAAA+AGG | + | chr2.4:31045572-31045591 | MS.gene60922:CDS | 35.0% | |
| TCAAATGCAATTTCTGAGCT+AGG | + | chr2.4:31045553-31045572 | MS.gene60922:CDS | 35.0% | |
| TCAAGATTTGTATTGGAGGA+GGG | + | chr2.4:31040878-31040897 | MS.gene60922:intron | 35.0% | |
| TCAGTGTCAAGTGCAAAAAA+TGG | + | chr2.4:31041574-31041593 | MS.gene60922:intron | 35.0% | |
| TCTGGGTTTAAAGATGAAGA+TGG | - | chr2.4:31041326-31041345 | None:intergenic | 35.0% | |
| TCTGTAATGCCGTGTTTATA+TGG | - | chr2.4:31044813-31044832 | None:intergenic | 35.0% | |
| TGAAATCATGAAAGGCTGAA+TGG | + | chr2.4:31045018-31045037 | MS.gene60922:intron | 35.0% | |
| TGGATCCTCATTATTTCAGT+GGG | + | chr2.4:31043693-31043712 | MS.gene60922:intron | 35.0% | |
| TGTAGTTTGGGCAATGAATT+GGG | + | chr2.4:31043645-31043664 | MS.gene60922:intron | 35.0% | |
| TTATATGGCAGATTGTTGGT+TGG | - | chr2.4:31044798-31044817 | None:intergenic | 35.0% | |
| TTATCACAAATCACAGCACT+AGG | + | chr2.4:31042484-31042503 | MS.gene60922:intron | 35.0% | |
| TTATCGCAAATTACAACGCT+AGG | - | chr2.4:31041796-31041815 | None:intergenic | 35.0% | |
| TTCATGTGCTCTTGCAATTT+CGG | - | chr2.4:31041697-31041716 | None:intergenic | 35.0% | |
| TTCTTTGGGCGTCTTTAATA+CGG | + | chr2.4:31042376-31042395 | MS.gene60922:intron | 35.0% | |
| TTGCACGCTAGTATTTATAG+AGG | - | chr2.4:31045622-31045641 | None:intergenic | 35.0% | |
| TTGCCAACAAGAAAAGGTTA+GGG | - | chr2.4:31040510-31040529 | None:intergenic | 35.0% | |
| TTGGATCCTCATTATTTCAG+TGG | + | chr2.4:31043692-31043711 | MS.gene60922:intron | 35.0% | |
| TTTATTTGAGAAGTCCTGCA+AGG | - | chr2.4:31045910-31045929 | None:intergenic | 35.0% | |
| TTTGCCAACAAGAAAAGGTT+AGG | - | chr2.4:31040511-31040530 | None:intergenic | 35.0% | |
| TTTGTTTCACTTCACCAAGA+AGG | + | chr2.4:31045938-31045957 | MS.gene60922:CDS | 35.0% | |
| ! | ACATCTTCATACCCTTTTCA+CGG | - | chr2.4:31045587-31045606 | None:intergenic | 35.0% |
| ! | AGAGAGAAACTACAGGATTT+TGG | - | chr2.4:31041423-31041442 | None:intergenic | 35.0% |
| ! | AGAGAGAAGGAATAGGATTT+TGG | + | chr2.4:31042847-31042866 | MS.gene60922:intron | 35.0% |
| ! | ATGTTTCTGATGCATTCTAG+GGG | + | chr2.4:31044394-31044413 | MS.gene60922:intron | 35.0% |
| ! | ATTTCATCTAAGGCTAGGTT+TGG | - | chr2.4:31043596-31043615 | None:intergenic | 35.0% |
| ! | CATGTTTCTGATGCATTCTA+GGG | + | chr2.4:31044393-31044412 | MS.gene60922:intron | 35.0% |
| ! | CTATTTACGACTGAGGTTTT+TGG | - | chr2.4:31041453-31041472 | None:intergenic | 35.0% |
| ! | CTATTTTCAACTGAGGTTTC+TGG | + | chr2.4:31042817-31042836 | MS.gene60922:intron | 35.0% |
| ! | CTTATTGTGGTATTGAACAG+TGG | + | chr2.4:31045460-31045479 | MS.gene60922:intron | 35.0% |
| ! | CTTTAACTTCTAACGTAAGC+TGG | - | chr2.4:31043118-31043137 | None:intergenic | 35.0% |
| ! | GGGATTTTCGGTATTAAAGA+TGG | + | chr2.4:31041891-31041910 | MS.gene60922:intron | 35.0% |
| ! | GTGATTTGAAATCTTGATGC+AGG | - | chr2.4:31042200-31042219 | None:intergenic | 35.0% |
| ! | TAGCCTTAGATGAAATTGAG+AGG | + | chr2.4:31043600-31043619 | MS.gene60922:intron | 35.0% |
| ! | TAGTCCCTCTAAATTTTTCG+TGG | - | chr2.4:31043175-31043194 | None:intergenic | 35.0% |
| ! | TCATGTTTCTGATGCATTCT+AGG | + | chr2.4:31044392-31044411 | MS.gene60922:intron | 35.0% |
| ! | TCTCAATTTCATCTAAGGCT+AGG | - | chr2.4:31043601-31043620 | None:intergenic | 35.0% |
| ! | TGAAGTACAGCTTTTATGGA+GGG | + | chr2.4:31044985-31045004 | MS.gene60922:intron | 35.0% |
| ! | TTATCTTGAAGAAGCATGCA+GGG | + | chr2.4:31045357-31045376 | MS.gene60922:CDS | 35.0% |
| ! | TTGAAGTACAGCTTTTATGG+AGG | + | chr2.4:31044984-31045003 | MS.gene60922:intron | 35.0% |
| ! | TTTTGCAGCAAGAAAAAGAG+AGG | - | chr2.4:31045710-31045729 | None:intergenic | 35.0% |
| !! | CAATTTTAATGACTGGTAGC+TGG | + | chr2.4:31041150-31041169 | MS.gene60922:intron | 35.0% |
| !! | CGTCTCTATTTAACTTGGTA+AGG | + | chr2.4:31043918-31043937 | MS.gene60922:intron | 35.0% |
| !! | GTATACCTTTTGAAGAAAGC+TGG | - | chr2.4:31040034-31040053 | None:intergenic | 35.0% |
| !!! | AGAGACTAGTTTTATAGCAG+TGG | + | chr2.4:31044555-31044574 | MS.gene60922:intron | 35.0% |
| !!! | AGCTAACTTTTGGTTTACGA+AGG | - | chr2.4:31042128-31042147 | None:intergenic | 35.0% |
| !!! | CTTCAGTTTTTTTCTGTCCA+TGG | + | chr2.4:31042029-31042048 | MS.gene60922:intron | 35.0% |
| !!! | TCATTTTTTCAGTGGAAAGG+AGG | + | chr2.4:31043871-31043890 | MS.gene60922:intron | 35.0% |
| !!! | TTGGTTTTGCCAACAAGAAA+AGG | - | chr2.4:31040516-31040535 | None:intergenic | 35.0% |
| AAACTCCCAAACAAAGCCTA+AGG | + | chr2.4:31041101-31041120 | MS.gene60922:intron | 40.0% | |
| AAACTCGCAAACAAAGCCTT+AGG | - | chr2.4:31040749-31040768 | None:intergenic | 40.0% | |
| AACACAAAATCCACATGCCA+TGG | + | chr2.4:31044884-31044903 | MS.gene60922:intron | 40.0% | |
| AACTCGCAAACAAAGCCTTA+GGG | - | chr2.4:31040748-31040767 | None:intergenic | 40.0% | |
| AAGTTAGCTGCAAAACCACA+AGG | + | chr2.4:31042139-31042158 | MS.gene60922:intron | 40.0% | |
| AATTACTTGCAGACTCCACT+AGG | + | chr2.4:31045274-31045293 | MS.gene60922:intron | 40.0% | |
| ACAATTCTCTCCTCATTTGG+GGG | + | chr2.4:31040852-31040871 | MS.gene60922:intron | 40.0% | |
| ACATAAGAACGAAAGGCAAG+CGG | + | chr2.4:31040470-31040489 | MS.gene60922:intron | 40.0% | |
| ACCTTCCAGCTTTCTTCAAA+AGG | + | chr2.4:31040026-31040045 | MS.gene60922:CDS | 40.0% | |
| AGCAATTACATCGGGATCAT+TGG | - | chr2.4:31044474-31044493 | None:intergenic | 40.0% | |
| AGTTATCCACTATAAGCCAG+TGG | + | chr2.4:31043560-31043579 | MS.gene60922:intron | 40.0% | |
| CCTTAGGGGAAGTTAATAGT+GGG | - | chr2.4:31040733-31040752 | None:intergenic | 40.0% | |
| CGATGTAATTGCTTGTGACA+TGG | + | chr2.4:31044481-31044500 | MS.gene60922:CDS | 40.0% | |
| CGGAATCAATAGTGAAACCA+TGG | - | chr2.4:31042049-31042068 | None:intergenic | 40.0% | |
| CTCAAGATTTGTATTGGAGG+AGG | + | chr2.4:31040877-31040896 | MS.gene60922:intron | 40.0% | |
| GAGGGACTAAAAGTGAAAGT+TGG | + | chr2.4:31043186-31043205 | MS.gene60922:intron | 40.0% | |
| GATATAACTGTGACACGTGA+AGG | - | chr2.4:31044609-31044628 | None:intergenic | 40.0% | |
| GCATCCAAAAATCTAGGAGA+AGG | - | chr2.4:31042407-31042426 | None:intergenic | 40.0% | |
| GCATCGGAAAATTAAGGAGT+GGG | + | chr2.4:31041871-31041890 | MS.gene60922:intron | 40.0% | |
| GGATCCTCATTATTTCAGTG+GGG | + | chr2.4:31043694-31043713 | MS.gene60922:intron | 40.0% | |
| GGGGAACTCAAGATTTGTAT+TGG | + | chr2.4:31040871-31040890 | MS.gene60922:intron | 40.0% | |
| GGGTTAAATACGTCGAGTAA+TGG | + | chr2.4:31040673-31040692 | MS.gene60922:intron | 40.0% | |
| GTATTGCAACACTAGTGACT+TGG | + | chr2.4:31044083-31044102 | MS.gene60922:intron | 40.0% | |
| GTGGGAAATATAGGGGAAAA+TGG | - | chr2.4:31041051-31041070 | None:intergenic | 40.0% | |
| GTGGGCAGTATGAGATATAT+TGG | + | chr2.4:31041187-31041206 | MS.gene60922:intron | 40.0% | |
| TAGAAGTTAAAGTACGGGGA+TGG | + | chr2.4:31043126-31043145 | MS.gene60922:intron | 40.0% | |
| TAGAAGTTAATGCTGATGCG+AGG | + | chr2.4:31041818-31041837 | MS.gene60922:intron | 40.0% | |
| TAGTAGTTAATGGTCATGCG+AGG | - | chr2.4:31042462-31042481 | None:intergenic | 40.0% | |
| TATAATAGCTGTTGAGCCGA+TGG | + | chr2.4:31044854-31044873 | MS.gene60922:intron | 40.0% | |
| TGCATCGGAAAATTAAGGAG+TGG | + | chr2.4:31041870-31041889 | MS.gene60922:intron | 40.0% | |
| TGCCAACAAGAAAAGGTTAG+GGG | - | chr2.4:31040509-31040528 | None:intergenic | 40.0% | |
| TTAATGACTGGTAGCTGGTT+GGG | + | chr2.4:31041155-31041174 | MS.gene60922:intron | 40.0% | |
| TTGAAGAAAGCTGGAAGGTT+TGG | - | chr2.4:31040025-31040044 | None:intergenic | 40.0% | |
| TTTAATGACTGGTAGCTGGT+TGG | + | chr2.4:31041154-31041173 | MS.gene60922:intron | 40.0% | |
| ! | AATGCTACTTCAGCTTCCTT+AGG | - | chr2.4:31041120-31041139 | None:intergenic | 40.0% |
| ! | ATACACGTGTCGACATTGTT+AGG | - | chr2.4:31042671-31042690 | None:intergenic | 40.0% |
| ! | ATGAAACACGGAAGCATGAA+AGG | + | chr2.4:31042320-31042339 | MS.gene60922:intron | 40.0% |
| ! | ATGGCATGTGGATTTTGTGT+TGG | - | chr2.4:31044885-31044904 | None:intergenic | 40.0% |
| ! | CTAAAAGCGTAGTTACCTCT+TGG | + | chr2.4:31043061-31043080 | MS.gene60922:intron | 40.0% |
| ! | CTTATCTTGAAGAAGCATGC+AGG | + | chr2.4:31045356-31045375 | MS.gene60922:CDS | 40.0% |
| ! | CTTTGTTTGGGAGTTTGGAT+GGG | - | chr2.4:31041097-31041116 | None:intergenic | 40.0% |
| ! | GAAGTACAGCTTTTATGGAG+GGG | + | chr2.4:31044986-31045005 | MS.gene60922:intron | 40.0% |
| ! | GACAGTATTCTTCACGCTTT+TGG | - | chr2.4:31044432-31044451 | None:intergenic | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+AGG | + | chr2.4:31040885-31040904 | MS.gene60922:intron | 40.0% |
| !! | ACCTTTTGAAGAAAGCTGGA+AGG | - | chr2.4:31040030-31040049 | None:intergenic | 40.0% |
| !! | ACGTATTTCTAGCATGTGCT+TGG | - | chr2.4:31040640-31040659 | None:intergenic | 40.0% |
| !! | AGCTTCCTTAGGCTTTGTTT+GGG | - | chr2.4:31041109-31041128 | None:intergenic | 40.0% |
| !! | ATGAGGATGATGATGGCTTA+TGG | - | chr2.4:31042095-31042114 | None:intergenic | 40.0% |
| !! | GCTTCTTGTTGGTAATGCAT+CGG | + | chr2.4:31041855-31041874 | MS.gene60922:intron | 40.0% |
| !! | GGCCAATTTTAATGACCAAG+AGG | - | chr2.4:31043079-31043098 | None:intergenic | 40.0% |
| !! | GTGGTTTTGCAGCTAACTTT+TGG | - | chr2.4:31042138-31042157 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr2.4:31040748-31040767 | MS.gene60922:intron | 40.0% |
| !! | TGAGGATGATGATGGCTTAT+GGG | - | chr2.4:31042094-31042113 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr2.4:31041102-31041121 | None:intergenic | 40.0% |
| !! | TTCTGGGATTGAAAGAGAGA+AGG | + | chr2.4:31042834-31042853 | MS.gene60922:intron | 40.0% |
| !! | TTTTTGTTTCCTAGCACCAG+AGG | - | chr2.4:31040576-31040595 | None:intergenic | 40.0% |
| !!! | GACACGTGTATTGCCATTTT+CGG | + | chr2.4:31042680-31042699 | MS.gene60922:intron | 40.0% |
| !!! | GTTGTTGCTGATTTTGGTTG+TGG | + | chr2.4:31044292-31044311 | MS.gene60922:CDS | 40.0% |
| !!! | TGGCATTAGAAGCTGGTTTT+TGG | - | chr2.4:31040005-31040024 | None:intergenic | 40.0% |
| AACATAGGAGACACAACCTC+TGG | + | chr2.4:31040557-31040576 | MS.gene60922:intron | 45.0% | |
| AACGCAAATGTCAAACTGGC+CGG | + | chr2.4:31044216-31044235 | MS.gene60922:CDS | 45.0% | |
| AATATTCACCATAGCGGCCA+TGG | - | chr2.4:31044904-31044923 | None:intergenic | 45.0% | |
| ACGAAGGTCGAAGATGAATG+AGG | - | chr2.4:31042112-31042131 | None:intergenic | 45.0% | |
| ACGGGGATGGAAAAGTTCAA+GGG | + | chr2.4:31043139-31043158 | MS.gene60922:intron | 45.0% | |
| ACTCGCAAACAAAGCCTTAG+GGG | - | chr2.4:31040747-31040766 | None:intergenic | 45.0% | |
| ACTGAGACAGACAAAACTCG+AGG | - | chr2.4:31045653-31045672 | None:intergenic | 45.0% | |
| ACTTCTAACGTAAGCTGGCA+TGG | - | chr2.4:31043113-31043132 | None:intergenic | 45.0% | |
| ATCTTGAGTTCCCCCAAATG+AGG | - | chr2.4:31040865-31040884 | None:intergenic | 45.0% | |
| ATGCATGTGTAGACGATGTG+AGG | + | chr2.4:31041515-31041534 | MS.gene60922:intron | 45.0% | |
| CAAAACTGATGCAACGGATC+AGG | + | chr2.4:31044736-31044755 | MS.gene60922:intron | 45.0% | |
| CAATAAGTCAGATCCTGACG+AGG | - | chr2.4:31045447-31045466 | None:intergenic | 45.0% | |
| CAGCAAGAAAAAGAGAGGAG+AGG | - | chr2.4:31045705-31045724 | None:intergenic | 45.0% | |
| CATAAGAACGAAAGGCAAGC+GGG | + | chr2.4:31040471-31040490 | MS.gene60922:intron | 45.0% | |
| CCCACTATTAACTTCCCCTA+AGG | + | chr2.4:31040730-31040749 | MS.gene60922:intron | 45.0% | |
| CGAACCCCACTGAAATAATG+AGG | - | chr2.4:31043701-31043720 | None:intergenic | 45.0% | |
| CGTCAGGATCTGACTTATTG+TGG | + | chr2.4:31045447-31045466 | MS.gene60922:intron | 45.0% | |
| CTCATGTGCTTTGTACGCAT+TGG | + | chr2.4:31044528-31044547 | MS.gene60922:intron | 45.0% | |
| CTGAGACAGACAAAACTCGA+GGG | - | chr2.4:31045652-31045671 | None:intergenic | 45.0% | |
| GAAGGTTTGGCATTAGAAGC+TGG | - | chr2.4:31040012-31040031 | None:intergenic | 45.0% | |
| GAGGTTGTGTCTCCTATGTT+TGG | - | chr2.4:31040557-31040576 | None:intergenic | 45.0% | |
| GCCTTAGGGGAAGTTAATAG+TGG | - | chr2.4:31040734-31040753 | None:intergenic | 45.0% | |
| GGTCATTAAAATTGGCCACG+TGG | + | chr2.4:31043082-31043101 | MS.gene60922:intron | 45.0% | |
| TACGGGGATGGAAAAGTTCA+AGG | + | chr2.4:31043138-31043157 | MS.gene60922:intron | 45.0% | |
| TCACAAATCACAGCACTAGG+TGG | + | chr2.4:31042487-31042506 | MS.gene60922:intron | 45.0% | |
| TCCACTATAAGCCAGTGGTA+TGG | + | chr2.4:31043565-31043584 | MS.gene60922:intron | 45.0% | |
| TCGCAAATTACAACGCTAGG+TGG | - | chr2.4:31041793-31041812 | None:intergenic | 45.0% | |
| TGAGACAGACAAAACTCGAG+GGG | - | chr2.4:31045651-31045670 | None:intergenic | 45.0% | |
| TGATGCGAGGAAAACACAAG+AGG | + | chr2.4:31041831-31041850 | MS.gene60922:intron | 45.0% | |
| TTTGGGGGGTGGGAAATATA+GGG | - | chr2.4:31041059-31041078 | None:intergenic | 45.0% | |
| ! | ACGTGTCGACATTGTTAGGA+TGG | - | chr2.4:31042667-31042686 | None:intergenic | 45.0% |
| ! | ATCTAAGGCTAGGTTTGGCA+AGG | - | chr2.4:31043591-31043610 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr2.4:31040753-31040772 | MS.gene60922:intron | 45.0% |
| ! | GGTAACTACGCTTTTAGACG+CGG | - | chr2.4:31043058-31043077 | None:intergenic | 45.0% |
| ! | GTAACTACGCTTTTAGACGC+GGG | - | chr2.4:31043057-31043076 | None:intergenic | 45.0% |
| ! | TAATTTTGCAGATGCGAGCG+AGG | + | chr2.4:31040115-31040134 | MS.gene60922:intron | 45.0% |
| ! | TGCCCCTAACCTTTTCTTGT+TGG | + | chr2.4:31040504-31040523 | MS.gene60922:intron | 45.0% |
| ! | TGTAGTAGTGAAGTGCCTTG+TGG | - | chr2.4:31042157-31042176 | None:intergenic | 45.0% |
| ! | TTGTGGTATTGAACAGTGGC+TGG | + | chr2.4:31045464-31045483 | MS.gene60922:intron | 45.0% |
| !! | ACACAAGAGGTGCTTCTTGT+TGG | + | chr2.4:31041844-31041863 | MS.gene60922:intron | 45.0% |
| !! | CAGCTTCCTTAGGCTTTGTT+TGG | - | chr2.4:31041110-31041129 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr2.4:31040752-31040771 | MS.gene60922:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+TGG | - | chr2.4:31041098-31041117 | None:intergenic | 45.0% |
| !! | TCAGCATCAAGTGCCGAAAA+TGG | - | chr2.4:31042696-31042715 | None:intergenic | 45.0% |
| !!! | AGGAGGGTTTTAGGAGGTTT+TGG | + | chr2.4:31040894-31040913 | MS.gene60922:intron | 45.0% |
| !!! | AGGGTTTTAGGAGGTTTTGG+AGG | + | chr2.4:31040897-31040916 | MS.gene60922:intron | 45.0% |
| !!! | GGGTTTTAGGAGGTTTTGGA+GGG | + | chr2.4:31040898-31040917 | MS.gene60922:intron | 45.0% |
| !!! | TATTGGAGGAGGGTTTTAGG+AGG | + | chr2.4:31040888-31040907 | MS.gene60922:intron | 45.0% |
| !!! | TTTTGTGTTGGTGCTGCCAT+CGG | - | chr2.4:31044873-31044892 | None:intergenic | 45.0% |
| !! | TTTAAATTAAATTAAAACTT+TGG | + | chr2.4:31041252-31041271 | MS.gene60922:intron | 5.0% |
| !!! | ATATATATAAAATTGAATTT+TGG | - | chr2.4:31040057-31040076 | None:intergenic | 5.0% |
| !!! | ATGTTTTTTTTAATTATTTT+TGG | + | chr2.4:31043673-31043692 | MS.gene60922:intron | 5.0% |
| !!! | TATATATAAAATTGAATTTT+GGG | - | chr2.4:31040056-31040075 | None:intergenic | 5.0% |
| !!! | TTATTAATTTTTTTATTAGT+TGG | + | chr2.4:31045219-31045238 | MS.gene60922:intron | 5.0% |
| AGTGGGGTTCGATAACTAGC+TGG | + | chr2.4:31043710-31043729 | MS.gene60922:intron | 50.0% | |
| ATAGAGAACATTGGGAGGGG+AGG | + | chr2.4:31040801-31040820 | MS.gene60922:intron | 50.0% | |
| CAACGGCGCTTGTACAAACA+AGG | - | chr2.4:31046089-31046108 | None:intergenic | 50.0% | |
| CATCGGGATCATTGGAGACA+AGG | - | chr2.4:31044466-31044485 | None:intergenic | 50.0% | |
| CGGGGATGGAAAAGTTCAAG+GGG | + | chr2.4:31043140-31043159 | MS.gene60922:intron | 50.0% | |
| CTGGTTGGGATTGTAACCGT+GGG | + | chr2.4:31041169-31041188 | MS.gene60922:intron | 50.0% | |
| GCTGAAGTAGCATTGCCATG+TGG | + | chr2.4:31041126-31041145 | MS.gene60922:intron | 50.0% | |
| GTTTGGGAGTTTGGATGGGA+GGG | - | chr2.4:31041093-31041112 | None:intergenic | 50.0% | |
| TAGAGAACATTGGGAGGGGA+GGG | + | chr2.4:31040802-31040821 | MS.gene60922:intron | 50.0% | |
| TCATGCGAGGAAAACGCAAG+AGG | - | chr2.4:31042449-31042468 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTGGATGGG+AGG | - | chr2.4:31041094-31041113 | None:intergenic | 50.0% | |
| TTGGGGGGTGGGAAATATAG+GGG | - | chr2.4:31041058-31041077 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr2.4:31040758-31040777 | MS.gene60922:intron | 50.0% | |
| TTTGGGAGTTTGGATGGGAG+GGG | - | chr2.4:31041092-31041111 | None:intergenic | 50.0% | |
| ! | CTTTGGGGGGTGGGAAATAT+AGG | - | chr2.4:31041060-31041079 | None:intergenic | 50.0% |
| ! | GAAAGCATGCCCGGTTGAAA+AGG | - | chr2.4:31045425-31045444 | None:intergenic | 50.0% |
| !! | CTAGGTGGTGTCGTTTGTAC+AGG | - | chr2.4:31041778-31041797 | None:intergenic | 50.0% |
| !! | GCCATACCACTGGCTTATAG+TGG | - | chr2.4:31043569-31043588 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr2.4:31040751-31040770 | MS.gene60922:intron | 50.0% |
| GAGACACAACCTCTGGTGCT+AGG | + | chr2.4:31040564-31040583 | MS.gene60922:intron | 55.0% | |
| GAGTTTGGATGGGAGGGGAA+AGG | - | chr2.4:31041087-31041106 | None:intergenic | 55.0% | |
| GATGCAACGGATCAGGCTTG+AGG | + | chr2.4:31044743-31044762 | MS.gene60922:intron | 55.0% | |
| GCTGGTTGGGATTGTAACCG+TGG | + | chr2.4:31041168-31041187 | MS.gene60922:intron | 55.0% | |
| GGGTCTGCTCCTCCAGTATT+TGG | - | chr2.4:31045523-31045542 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr2.4:31040757-31040776 | MS.gene60922:intron | 55.0% | |
| GTTTGGCAAGGCCATACCAC+TGG | - | chr2.4:31043579-31043598 | None:intergenic | 55.0% | |
| TCGGCAGATGCAGAACCTAG+TGG | - | chr2.4:31045292-31045311 | None:intergenic | 55.0% | |
| TTGGATGGGAGGGGAAAGGA+GGG | - | chr2.4:31041083-31041102 | None:intergenic | 55.0% | |
| TTTGGATGGGAGGGGAAAGG+AGG | - | chr2.4:31041084-31041103 | None:intergenic | 55.0% | |
| ! | ACTACGCTTTTAGACGCGGG+CGG | - | chr2.4:31043054-31043073 | None:intergenic | 55.0% |
| ! | CATGCAGGGTGCTTAAGCCA+GGG | + | chr2.4:31045371-31045390 | MS.gene60922:CDS | 55.0% |
| !! | AACGCAAGAGGCGCTTCTTC+TGG | - | chr2.4:31042437-31042456 | None:intergenic | 55.0% |
| ACATTGGGAGGGGAGGGCTT+TGG | + | chr2.4:31040808-31040827 | MS.gene60922:intron | 60.0% | |
| ACCATAGCGGCCATGGCATG+TGG | - | chr2.4:31044897-31044916 | None:intergenic | 60.0% | |
| ATGCGAGCGAGGTTGTCTGG+TGG | + | chr2.4:31040126-31040145 | MS.gene60922:CDS | 60.0% | |
| ATTGGGAGGGGAGGGCTTTG+GGG | + | chr2.4:31040810-31040829 | MS.gene60922:intron | 60.0% | |
| CAGATGCGAGCGAGGTTGTC+TGG | + | chr2.4:31040123-31040142 | MS.gene60922:intron | 60.0% | |
| CATTGGGAGGGGAGGGCTTT+GGG | + | chr2.4:31040809-31040828 | MS.gene60922:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | + | chr2.4:31040762-31040781 | MS.gene60922:intron | 60.0% | |
| GAGGGGAAAGGAGGGCTTTG+GGG | - | chr2.4:31041075-31041094 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr2.4:31040763-31040782 | MS.gene60922:intron | 60.0% | |
| GGAGGGGAAAGGAGGGCTTT+GGG | - | chr2.4:31041076-31041095 | None:intergenic | 60.0% | |
| GTCAAACTGGCCGGAACAGC+CGG | + | chr2.4:31044225-31044244 | MS.gene60922:CDS | 60.0% | |
| TCCACATGCCATGGCCGCTA+TGG | + | chr2.4:31044893-31044912 | MS.gene60922:intron | 60.0% | |
| ! | AGGGGAAAGGAGGGCTTTGG+GGG | - | chr2.4:31041074-31041093 | None:intergenic | 60.0% |
| ! | CCTGACGAGGAAAGCATGCC+CGG | - | chr2.4:31045434-31045453 | None:intergenic | 60.0% |
| ! | GCATGCAGGGTGCTTAAGCC+AGG | + | chr2.4:31045370-31045389 | MS.gene60922:CDS | 60.0% |
| ! | GGGAAGGGAGGGGAGAGTTT+TGG | + | chr2.4:31040773-31040792 | MS.gene60922:intron | 60.0% |
| !! | AAAGGAGGGCTTTGGGGGGT+GGG | - | chr2.4:31041069-31041088 | None:intergenic | 60.0% |
| CCGGGCATGCTTTCCTCGTC+AGG | + | chr2.4:31045431-31045450 | MS.gene60922:intron | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | + | chr2.4:31040761-31040780 | MS.gene60922:intron | 65.0% | |
| GCTGGCATGGCATTGCCACG+TGG | - | chr2.4:31043100-31043119 | None:intergenic | 65.0% | |
| GGGAGGGGAAAGGAGGGCTT+TGG | - | chr2.4:31041077-31041096 | None:intergenic | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+GGG | + | chr2.4:31040811-31040830 | MS.gene60922:intron | 65.0% |
| !! | GAAAGGAGGGCTTTGGGGGG+TGG | - | chr2.4:31041070-31041089 | None:intergenic | 65.0% |
| !! | GGGGAAAGGAGGGCTTTGGG+GGG | - | chr2.4:31041073-31041092 | None:intergenic | 65.0% |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr2.4:31040812-31040831 | MS.gene60922:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 31039949 | 31046109 | 31039949 | ID=MS.gene60922 |
| chr2.4 | mRNA | 31039949 | 31046109 | 31039949 | ID=MS.gene60922.t1;Parent=MS.gene60922 |
| chr2.4 | exon | 31039949 | 31040047 | 31039949 | ID=MS.gene60922.t1.exon1;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31039949 | 31040047 | 31039949 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31040126 | 31040187 | 31040126 | ID=MS.gene60922.t1.exon2;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31040126 | 31040187 | 31040126 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31043883 | 31043934 | 31043883 | ID=MS.gene60922.t1.exon3;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31043883 | 31043934 | 31043883 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31044199 | 31044313 | 31044199 | ID=MS.gene60922.t1.exon4;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31044199 | 31044313 | 31044199 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31044414 | 31044508 | 31044414 | ID=MS.gene60922.t1.exon5;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31044414 | 31044508 | 31044414 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31045286 | 31045392 | 31045286 | ID=MS.gene60922.t1.exon6;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31045286 | 31045392 | 31045286 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31045480 | 31045594 | 31045480 | ID=MS.gene60922.t1.exon7;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31045480 | 31045594 | 31045480 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31045915 | 31045959 | 31045915 | ID=MS.gene60922.t1.exon8;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31045915 | 31045959 | 31045915 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| chr2.4 | exon | 31046038 | 31046109 | 31046038 | ID=MS.gene60922.t1.exon9;Parent=MS.gene60922.t1 |
| chr2.4 | CDS | 31046038 | 31046109 | 31046038 | ID=cds.MS.gene60922.t1;Parent=MS.gene60922.t1 |
| Gene Sequence |
| Protein sequence |
