AlfalfaGEDB | MS.gene066535

M. sativa cultivar XinJiangDaYe / MS.gene066535

KEGG: K11251
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0032991 GO:0032993 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:0110165 GO:1901363
PFAM: PF00125.27 PF16211.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066535.t1	RHN49328.1	100	139	0	0	1	139	57	195	4.40E-67	263.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066535.t1	O65759	97.1	139	4	0	1	139	1	139	1.3e-67	256.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066535.t1	A2Q3H4	100.0	139	0	0	1	139	1	139	3.1e-67	263.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene056335	MS.gene066535	0.811637	6.34E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene066535	MS.gene05905	PPI
MS.gene066535	MS.gene045235	PPI
MS.gene066535	MS.gene78324	PPI
MS.gene95527	MS.gene066535	PPI
MS.gene007189	MS.gene066535	PPI
MS.gene066535	MS.gene057458	PPI
MS.gene066535	MS.gene29521	PPI
MS.gene066535	MS.gene017431	PPI
MS.gene066535	MS.gene70258	PPI
MS.gene92245	MS.gene066535	PPI
MS.gene066535	MS.gene035097	PPI
MS.gene24295	MS.gene066535	PPI
MS.gene066535	MS.gene066537	PPI
MS.gene066535	MS.gene003846	PPI
MS.gene066535	MS.gene038800	PPI
MS.gene066535	MS.gene056335	PPI
MS.gene066535	MS.gene58112	PPI
MS.gene066535	MS.gene29300	PPI
MS.gene057206	MS.gene066535	PPI
MS.gene066535	MS.gene045065	PPI
MS.gene066535	MS.gene41916	PPI
MS.gene066535	MS.gene072432	PPI
MS.gene037324	MS.gene066535	PPI
MS.gene58285	MS.gene066535	PPI
MS.gene07616	MS.gene066535	PPI
MS.gene24383	MS.gene066535	PPI
MS.gene066535	MS.gene89203	PPI
MS.gene066535	MS.gene02591	PPI
MS.gene46640	MS.gene066535	PPI
MS.gene066535	MS.gene60922	PPI
MS.gene066535	MS.gene00233	PPI
MS.gene027907	MS.gene066535	PPI
MS.gene78322	MS.gene066535	PPI
MS.gene028153	MS.gene066535	PPI
MS.gene066535	MS.gene47573	PPI
MS.gene066535	MS.gene001986	PPI
MS.gene99744	MS.gene066535	PPI
MS.gene28304	MS.gene066535	PPI
MS.gene58116	MS.gene066535	PPI
MS.gene066535	MS.gene056896	PPI
MS.gene066535	MS.gene28303	PPI
MS.gene030661	MS.gene066535	PPI
MS.gene066535	MS.gene038409	PPI
MS.gene87262	MS.gene066535	PPI
MS.gene029242	MS.gene066535	PPI
MS.gene062778	MS.gene066535	PPI
MS.gene42236	MS.gene066535	PPI
MS.gene28432	MS.gene066535	PPI
MS.gene92710	MS.gene066535	PPI
MS.gene066535	MS.gene044021	PPI
MS.gene066535	MS.gene26084	PPI
MS.gene97703	MS.gene066535	PPI
MS.gene066535	MS.gene78227	PPI
MS.gene066535	MS.gene82426	PPI
MS.gene066535	MS.gene06859	PPI
MS.gene066535	MS.gene65125	PPI
MS.gene68979	MS.gene066535	PPI
MS.gene066535	MS.gene050290	PPI
MS.gene066535	MS.gene23886	PPI
MS.gene021887	MS.gene066535	PPI
MS.gene009155	MS.gene066535	PPI
MS.gene78924	MS.gene066535	PPI
MS.gene066535	MS.gene050252	PPI
MS.gene020313	MS.gene066535	PPI
MS.gene066535	MS.gene011421	PPI
MS.gene066535	MS.gene29299	PPI
MS.gene75575	MS.gene066535	PPI
MS.gene066535	MS.gene015760	PPI
MS.gene013822	MS.gene066535	PPI
MS.gene39538	MS.gene066535	PPI
MS.gene066535	MS.gene054186	PPI
MS.gene066535	MS.gene08465	PPI
MS.gene066535	MS.gene056257	PPI
MS.gene78922	MS.gene066535	PPI
MS.gene066535	MS.gene29445	PPI
MS.gene071851	MS.gene066535	PPI
MS.gene066535	MS.gene78224	PPI
MS.gene066535	MS.gene038612	PPI
MS.gene28434	MS.gene066535	PPI
MS.gene066535	MS.gene056617	PPI
MS.gene066535	MS.gene62799	PPI
MS.gene77911	MS.gene066535	PPI
MS.gene066535	MS.gene044498	PPI
MS.gene066535	MS.gene29298	PPI
MS.gene78112	MS.gene066535	PPI
MS.gene066535	MS.gene45448	PPI
MS.gene066535	MS.gene81765	PPI
MS.gene066535	MS.gene033017	PPI
MS.gene066535	MS.gene46303	PPI
MS.gene066535	MS.gene70990	PPI
MS.gene24706	MS.gene066535	PPI
MS.gene066535	MS.gene28438	PPI
MS.gene27648	MS.gene066535	PPI
MS.gene059054	MS.gene066535	PPI
MS.gene066535	MS.gene067033	PPI
MS.gene066535	MS.gene066536	PPI
MS.gene066535	MS.gene072431	PPI
MS.gene068178	MS.gene066535	PPI
MS.gene066535	MS.gene83444	PPI
MS.gene066535	MS.gene78323	PPI
MS.gene066535	MS.gene033382	PPI
MS.gene066535	MS.gene91631	PPI
MS.gene066535	MS.gene58114	PPI
MS.gene32514	MS.gene066535	PPI
MS.gene066535	MS.gene04748	PPI
MS.gene066535	MS.gene50129	PPI
MS.gene066535	MS.gene044591	PPI
MS.gene013534	MS.gene066535	PPI
MS.gene045232	MS.gene066535	PPI
MS.gene04820	MS.gene066535	PPI
MS.gene072433	MS.gene066535	PPI
MS.gene066535	MS.gene32513	PPI
MS.gene017174	MS.gene066535	PPI
MS.gene066535	MS.gene67108	PPI
MS.gene066535	MS.gene64164	PPI
MS.gene030666	MS.gene066535	PPI
MS.gene066535	MS.gene023799	PPI
MS.gene066535	MS.gene26950	PPI
MS.gene066535	MS.gene52173	PPI
MS.gene066535	MS.gene72768	PPI
MS.gene066535	MS.gene031283	PPI
MS.gene066537	MS.gene066535	PPI
MS.gene97701	MS.gene066535	PPI
MS.gene045233	MS.gene066535	PPI
MS.gene066535	MS.gene26406	PPI
MS.gene059422	MS.gene066535	PPI
MS.gene066535	MS.gene051008	PPI
MS.gene066535	MS.gene81051	PPI
MS.gene066535	MS.gene068179	PPI
MS.gene049111	MS.gene066535	PPI
MS.gene027904	MS.gene066535	PPI
MS.gene066535	MS.gene027909	PPI
MS.gene75426	MS.gene066535	PPI
MS.gene066535	MS.gene70261	PPI
MS.gene70263	MS.gene066535	PPI
MS.gene03801	MS.gene066535	PPI
MS.gene06645	MS.gene066535	PPI
MS.gene066535	MS.gene018762	PPI
MS.gene72993	MS.gene066535	PPI
MS.gene066535	MS.gene065496	PPI
MS.gene066535	MS.gene030664	PPI
MS.gene066535	MS.gene27326	PPI
MS.gene066535	MS.gene034846	PPI
MS.gene66051	MS.gene066535	PPI
MS.gene79130	MS.gene066535	PPI
MS.gene062301	MS.gene066535	PPI
MS.gene031283	MS.gene066535	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066535.t1	MTR_7g114060	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene066535.t1	MTR_7g114040	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene066535.t1	MTR_7g108320	95.775	142	3	1	1	139	1	142	4.40e-93	265
MS.gene066535.t1	MTR_7g093910	87.313	134	17	0	6	139	9	142	6.22e-82	237
MS.gene066535.t1	MTR_7g114050	87.023	131	6	2	9	139	11	130	3.86e-72	212
MS.gene066535.t1	MTR_2g082510	86.777	121	12	1	10	126	3	123	3.42e-69	204
MS.gene066535.t1	MTR_2g082220	84.921	126	11	2	10	129	3	126	4.30e-69	204
MS.gene066535.t1	MTR_2g096610	75.000	120	30	0	18	137	21	140	1.15e-59	181
MS.gene066535.t1	MTR_7g113160	76.068	117	28	0	9	125	16	132	3.78e-59	179
MS.gene066535.t1	MTR_4g063280	79.091	110	23	0	18	127	17	126	2.93e-58	177
MS.gene066535.t1	MTR_2g096570	81.132	106	20	0	19	124	23	128	5.36e-58	177
MS.gene066535.t1	MTR_4g063410	79.439	107	22	0	19	125	24	130	5.44e-58	177
MS.gene066535.t1	MTR_4g071150	80.374	107	21	0	19	125	24	130	6.46e-58	177
MS.gene066535.t1	MTR_4g064005	81.132	106	20	0	19	124	24	129	6.49e-58	177
MS.gene066535.t1	MTR_8g086640	81.132	106	20	0	19	124	24	129	7.30e-58	177
MS.gene066535.t1	MTR_4g064967	81.132	106	20	0	19	124	24	129	8.16e-58	176
MS.gene066535.t1	MTR_6g005150	61.345	119	37	2	19	136	26	136	5.87e-42	136
MS.gene066535.t1	MTR_1g011750	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene066535.t1	MTR_1g011850	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene066535.t1	MTR_1g114050	62.857	105	37	2	20	123	24	127	5.35e-38	125
MS.gene066535.t1	MTR_1g071040	63.462	104	36	2	21	123	28	130	1.15e-37	125
MS.gene066535.t1	MTR_4g063300	67.708	96	23	1	40	127	10	105	7.05e-36	120
MS.gene066535.t1	MTR_4g005910	88.889	45	5	0	82	126	4	48	6.44e-23	85.5
MS.gene066535.t1	MTR_7g010440	54.444	90	41	0	47	136	96	185	2.92e-22	89.7
MS.gene066535.t1	MTR_4g048490	44.860	107	30	2	19	125	26	103	2.83e-20	80.1
MS.gene066535.t1	MTR_1g069770	55.224	67	30	0	62	128	32	98	1.19e-18	75.9
MS.gene066535.t1	MTR_7g027610	41.818	110	32	3	18	123	13	94	8.02e-16	68.9
MS.gene066535.t1	MTR_0653s0030	52.830	53	25	0	50	102	43	95	4.63e-12	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066535.t1	AT1G54690	92.958	142	7	1	1	139	1	142	2.22e-90	258
MS.gene066535.t1	AT1G08880	94.118	136	8	0	4	139	7	142	5.41e-90	258
MS.gene066535.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene066535.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene066535.t1	AT5G54640	82.946	129	19	1	1	129	1	126	1.59e-69	205
MS.gene066535.t1	AT1G51060	83.871	124	16	1	10	129	3	126	1.51e-68	203
MS.gene066535.t1	AT3G20670	84.677	124	15	1	10	129	3	126	4.76e-68	202
MS.gene066535.t1	AT5G59870	73.643	129	29	2	1	124	1	129	1.24e-60	184
MS.gene066535.t1	AT5G27670	73.438	128	29	1	2	124	3	130	4.78e-58	177
MS.gene066535.t1	AT5G02560	79.439	107	22	0	18	124	23	129	5.23e-57	174
MS.gene066535.t1	AT5G02560	64.885	131	22	1	18	124	23	153	1.37e-51	162
MS.gene066535.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene066535.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene066535.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene066535.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene066535.t1	AT1G52740	61.905	105	38	2	20	123	27	130	2.42e-38	127
MS.gene066535.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene066535.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene066535.t1	AT4G13570	43.220	118	65	2	1	117	2	118	3.98e-23	87.8
MS.gene066535.t1	AT4G13570	49.451	91	44	2	28	117	35	124	9.39e-22	84.3

Find 49 sgRNAs with CRISPR-Local

Find 61 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCCCTTTCCAACCTTCTT+AGG	0.222545	7.1:+2487845	None:intergenic
ATCTGCTTCTCAAGAATTCT+AGG	0.264115	7.1:-2487810	None:intergenic
TGAAGAACTCAGCAAGCTTT+TGG	0.286717	7.1:-2487924	MS.gene066535:CDS
GAAACTGATTTGGCAGCCTT+TGG	0.309618	7.1:+2488269	None:intergenic
TGAAGATCTTGAAACTGATT+TGG	0.311823	7.1:+2488259	None:intergenic
AACACGTTCGGCGTATTTAC+CGG	0.321195	7.1:+2488187	None:intergenic
GGAAAGGGCAAAGGAGAAAT+TGG	0.326882	7.1:-2487833	MS.gene066535:CDS
AGCAAAGTCTGATGAATATT+AGG	0.347792	7.1:+2487869	None:intergenic
TCAGACTTTGCTACCTAAGA+AGG	0.421667	7.1:-2487858	MS.gene066535:CDS
GGCACATTCAGCTTGCTGTT+AGG	0.440630	7.1:-2487952	MS.gene066535:CDS
GAGTTCCACTGGCACAACTA+AGG	0.456467	7.1:-2488306	MS.gene066535:CDS
AGGACGGCGGAGAGGTAGAC+AGG	0.463287	7.1:+2488152	None:intergenic
GGGACTGTGACCATTGCTAA+TGG	0.468303	7.1:-2487902	MS.gene066535:CDS
AGCACCGGCACCAACACGTT+CGG	0.480590	7.1:+2488175	None:intergenic
GTTTCAAGATCTTCAAAGGC+AGG	0.496108	7.1:-2488251	MS.gene066535:CDS
CTGGCACAACTAAGGGCGGA+AGG	0.502885	7.1:-2488298	MS.gene066535:CDS
ATCAGTTTCAAGATCTTCAA+AGG	0.503488	7.1:-2488255	MS.gene066535:CDS
CTACCTAAGAAGGTTGGAAA+GGG	0.510822	7.1:-2487848	MS.gene066535:CDS
TCTGCTTCTCAAGAATTCTA+GGG	0.519604	7.1:-2487809	None:intergenic
GGCACAACTAAGGGCGGAAG+GGG	0.525782	7.1:-2488296	MS.gene066535:CDS
AATTGGCTGGGAACGCTGCA+AGG	0.533557	7.1:-2488003	MS.gene066535:CDS
ACTTTGCTACCTAAGAAGGT+TGG	0.535784	7.1:-2487854	MS.gene066535:CDS
TGGCACAACTAAGGGCGGAA+GGG	0.543224	7.1:-2488297	MS.gene066535:CDS
AGTTCCACTGGCACAACTAA+GGG	0.549244	7.1:-2488305	MS.gene066535:CDS
TACGCCGAACGTGTTGGTGC+CGG	0.556200	7.1:-2488179	MS.gene066535:CDS
GCTACCTAAGAAGGTTGGAA+AGG	0.557785	7.1:-2487849	MS.gene066535:CDS
ATTGGCTGGGAACGCTGCAA+GGG	0.562499	7.1:-2488002	MS.gene066535:CDS
ACAGCAAGCTGAATGTGCCT+TGG	0.570928	7.1:+2487956	None:intergenic
GAATGTGCCTTGGTACAATA+CGG	0.571461	7.1:+2487966	None:intergenic
GGGCGGAAGGGGTAAGCCAA+AGG	0.573881	7.1:-2488285	MS.gene066535:CDS
CGGCGTATTTACCGGCCTTG+AGG	0.577173	7.1:+2488195	None:intergenic
ATCGCGAGATTCCTCAAGGC+CGG	0.578871	7.1:-2488206	MS.gene066535:CDS
TCCGCCCTTAGTTGTGCCAG+TGG	0.580065	7.1:+2488301	None:intergenic
GAATCTCGCGATTCTTCCGA+CGG	0.592664	7.1:+2488217	None:intergenic
GGTAAATACGCCGAACGTGT+TGG	0.593895	7.1:-2488185	MS.gene066535:CDS
CCTTGAGTATCTCGCTGCTG+AGG	0.612329	7.1:-2488132	MS.gene066535:intron
AAGAAGGTTGGAAAGGGCAA+AGG	0.621113	7.1:-2487842	MS.gene066535:CDS
AATCTCGCGATTCTTCCGAC+GGG	0.626786	7.1:+2488218	None:intergenic
TAAAACACCACCATTAGCAA+TGG	0.630364	7.1:+2487892	None:intergenic
CCTCAGCAGCGAGATACTCA+AGG	0.638807	7.1:+2488132	None:intergenic
GGAGAGGTAGACAGGAGCAC+CGG	0.644805	7.1:+2488160	None:intergenic
TCCACTGGCACAACTAAGGG+CGG	0.647888	7.1:-2488302	MS.gene066535:CDS
AAGAATCGCGAGATTCCTCA+AGG	0.651972	7.1:-2488210	MS.gene066535:CDS
ACTGTGACCATTGCTAATGG+TGG	0.653058	7.1:-2487899	MS.gene066535:CDS
GCAGGTCTTCAATTTCCCGT+CGG	0.653866	7.1:-2488233	MS.gene066535:CDS
GATACTCAAGGACGGCGGAG+AGG	0.669935	7.1:+2488144	None:intergenic
AGCAGCGAGATACTCAAGGA+CGG	0.684917	7.1:+2488136	None:intergenic
AGAAGAACCGTATTGTACCA+AGG	0.686303	7.1:-2487973	MS.gene066535:CDS
AGCGAGATACTCAAGGACGG+CGG	0.736224	7.1:+2488139	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATACAGTTTAATCAAAT+TGG	+	chr7.1:2488074-2488093	None:intergenic	15.0%
!!!	ATTAAACTGTATTTTCATTT+TGG	-	chr7.1:2488079-2488098	MS.gene066535:intron	15.0%
!!!	GTATTTTCATTTTGGTATTT+AGG	-	chr7.1:2488087-2488106	MS.gene066535:intron	20.0%
!!!	TCTCTTTTTTGTATAATGTA+GGG	-	chr7.1:2488040-2488059	MS.gene066535:intron	20.0%
!	ATACAAAAAAGAGAGTGAAA+GGG	+	chr7.1:2488034-2488053	None:intergenic	25.0%
!	TATACAAAAAAGAGAGTGAA+AGG	+	chr7.1:2488035-2488054	None:intergenic	25.0%
!!!	CTCTCTTTTTTGTATAATGT+AGG	-	chr7.1:2488039-2488058	MS.gene066535:intron	25.0%
!!!	TCATTTTGGTATTTAGGTTT+TGG	-	chr7.1:2488093-2488112	MS.gene066535:intron	25.0%
	AGCAAAGTCTGATGAATATT+AGG	+	chr7.1:2488253-2488272	None:intergenic	30.0%
	ATCAGTTTCAAGATCTTCAA+AGG	-	chr7.1:2487864-2487883	MS.gene066535:CDS	30.0%
	TGAAGATCTTGAAACTGATT+TGG	+	chr7.1:2487863-2487882	None:intergenic	30.0%
!!!	TGGTATTTAGGTTTTGGAAT+TGG	-	chr7.1:2488099-2488118	MS.gene066535:intron	30.0%
	GTGAAAGGGAAATTGAAGAA+AGG	+	chr7.1:2488020-2488039	None:intergenic	35.0%
	TAAAACACCACCATTAGCAA+TGG	+	chr7.1:2488230-2488249	None:intergenic	35.0%
!!!	ATTTAGGTTTTGGAATTGGC+TGG	-	chr7.1:2488103-2488122	MS.gene066535:intron	35.0%
!!!	TTTAGGTTTTGGAATTGGCT+GGG	-	chr7.1:2488104-2488123	MS.gene066535:intron	35.0%
	ACTTTGCTACCTAAGAAGGT+TGG	-	chr7.1:2488265-2488284	MS.gene066535:CDS	40.0%
	AGAAGAACCGTATTGTACCA+AGG	-	chr7.1:2488146-2488165	MS.gene066535:CDS	40.0%
	CTACCTAAGAAGGTTGGAAA+GGG	-	chr7.1:2488271-2488290	MS.gene066535:CDS	40.0%
	GAATGTGCCTTGGTACAATA+CGG	+	chr7.1:2488156-2488175	None:intergenic	40.0%
	GTTTCAAGATCTTCAAAGGC+AGG	-	chr7.1:2487868-2487887	MS.gene066535:CDS	40.0%
	TCAGACTTTGCTACCTAAGA+AGG	-	chr7.1:2488261-2488280	MS.gene066535:CDS	40.0%
!	AAGAACTCAGCAAGCTTTTG+GGG	-	chr7.1:2488197-2488216	MS.gene066535:CDS	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	-	chr7.1:2488196-2488215	MS.gene066535:CDS	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	-	chr7.1:2488195-2488214	MS.gene066535:CDS	40.0%
	AACACGTTCGGCGTATTTAC+CGG	+	chr7.1:2487935-2487954	None:intergenic	45.0%
	AAGAAGGTTGGAAAGGGCAA+AGG	-	chr7.1:2488277-2488296	MS.gene066535:CDS	45.0%
	AAGAATCGCGAGATTCCTCA+AGG	-	chr7.1:2487909-2487928	MS.gene066535:CDS	45.0%
	ACTGTGACCATTGCTAATGG+TGG	-	chr7.1:2488220-2488239	MS.gene066535:CDS	45.0%
	AGTTCCACTGGCACAACTAA+GGG	-	chr7.1:2487814-2487833	MS.gene066535:CDS	45.0%
	GCTACCTAAGAAGGTTGGAA+AGG	-	chr7.1:2488270-2488289	MS.gene066535:CDS	45.0%
	GGAAAGGGCAAAGGAGAAAT+TGG	-	chr7.1:2488286-2488305	MS.gene066535:CDS	45.0%
	TTGCCCTTTCCAACCTTCTT+AGG	+	chr7.1:2488277-2488296	None:intergenic	45.0%
!!	GAAACTGATTTGGCAGCCTT+TGG	+	chr7.1:2487853-2487872	None:intergenic	45.0%
	AATCTCGCGATTCTTCCGAC+GGG	+	chr7.1:2487904-2487923	None:intergenic	50.0%
	ACAGCAAGCTGAATGTGCCT+TGG	+	chr7.1:2488166-2488185	None:intergenic	50.0%
	AGCAGCGAGATACTCAAGGA+CGG	+	chr7.1:2487986-2488005	None:intergenic	50.0%
	GAATCTCGCGATTCTTCCGA+CGG	+	chr7.1:2487905-2487924	None:intergenic	50.0%
	GAGTTCCACTGGCACAACTA+AGG	-	chr7.1:2487813-2487832	MS.gene066535:CDS	50.0%
	GCAGGTCTTCAATTTCCCGT+CGG	-	chr7.1:2487886-2487905	MS.gene066535:CDS	50.0%
	GGGACTGTGACCATTGCTAA+TGG	-	chr7.1:2488217-2488236	MS.gene066535:CDS	50.0%
	GGTAAATACGCCGAACGTGT+TGG	-	chr7.1:2487934-2487953	MS.gene066535:CDS	50.0%
!!	GGCACATTCAGCTTGCTGTT+AGG	-	chr7.1:2488167-2488186	MS.gene066535:CDS	50.0%
	AATTGGCTGGGAACGCTGCA+AGG	-	chr7.1:2488116-2488135	MS.gene066535:intron	55.0%
	AGCGAGATACTCAAGGACGG+CGG	+	chr7.1:2487983-2488002	None:intergenic	55.0%
	ATCGCGAGATTCCTCAAGGC+CGG	-	chr7.1:2487913-2487932	MS.gene066535:CDS	55.0%
	ATTGGCTGGGAACGCTGCAA+GGG	-	chr7.1:2488117-2488136	MS.gene066535:intron	55.0%
	CCTCAGCAGCGAGATACTCA+AGG	+	chr7.1:2487990-2488009	None:intergenic	55.0%
	CCTTGAGTATCTCGCTGCTG+AGG	-	chr7.1:2487987-2488006	MS.gene066535:CDS	55.0%
	TCCACTGGCACAACTAAGGG+CGG	-	chr7.1:2487817-2487836	MS.gene066535:CDS	55.0%
	TGGCACAACTAAGGGCGGAA+GGG	-	chr7.1:2487822-2487841	MS.gene066535:CDS	55.0%
	CGGCGTATTTACCGGCCTTG+AGG	+	chr7.1:2487927-2487946	None:intergenic	60.0%
	CTGGCACAACTAAGGGCGGA+AGG	-	chr7.1:2487821-2487840	MS.gene066535:CDS	60.0%
	GATACTCAAGGACGGCGGAG+AGG	+	chr7.1:2487978-2487997	None:intergenic	60.0%
	GGCACAACTAAGGGCGGAAG+GGG	-	chr7.1:2487823-2487842	MS.gene066535:CDS	60.0%
	TCCGCCCTTAGTTGTGCCAG+TGG	+	chr7.1:2487821-2487840	None:intergenic	60.0%
!	GGAGAGGTAGACAGGAGCAC+CGG	+	chr7.1:2487962-2487981	None:intergenic	60.0%
!	TACGCCGAACGTGTTGGTGC+CGG	-	chr7.1:2487940-2487959	MS.gene066535:CDS	60.0%
!!	AGCACCGGCACCAACACGTT+CGG	+	chr7.1:2487947-2487966	None:intergenic	60.0%
	AGGACGGCGGAGAGGTAGAC+AGG	+	chr7.1:2487970-2487989	None:intergenic	65.0%
	GGGCGGAAGGGGTAAGCCAA+AGG	-	chr7.1:2487834-2487853	MS.gene066535:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	2487811	2488330	2487811	ID=MS.gene066535
chr7.1	mRNA	2487811	2488330	2487811	ID=MS.gene066535.t1;Parent=MS.gene066535
chr7.1	exon	2488133	2488330	2488133	ID=MS.gene066535.t1.exon1;Parent=MS.gene066535.t1
chr7.1	CDS	2488133	2488330	2488133	ID=cds.MS.gene066535.t1;Parent=MS.gene066535.t1
chr7.1	exon	2487811	2488032	2487811	ID=MS.gene066535.t1.exon2;Parent=MS.gene066535.t1
chr7.1	CDS	2487811	2488032	2487811	ID=cds.MS.gene066535.t1;Parent=MS.gene066535.t1

Gene Sequence

>MS.gene066535

ATGAGTTCCACTGGCACAACTAAGGGCGGAAGGGGTAAGCCAAAGGCTGCCAAATCAGTTTCAAGATCTTCAAAGGCAGGTCTTCAATTTCCCGTCGGAAGAATCGCGAGATTCCTCAAGGCCGGTAAATACGCCGAACGTGTTGGTGCCGGTGCTCCTGTCTACCTCTCCGCCGTCCTTGAGTATCTCGCTGCTGAGGTTTGTTTCCTTTCTTCAATTTCCCTTTCACTCTCTTTTTTGTATAATGTAGGGTTCTAGATCCAATTTGATTAAACTGTATTTTCATTTTGGTATTTAGGTTTTGGAATTGGCTGGGAACGCTGCAAGGGACAACAAGAAGAACCGTATTGTACCAAGGCACATTCAGCTTGCTGTTAGGAACGATGAAGAACTCAGCAAGCTTTTGGGGACTGTGACCATTGCTAATGGTGGTGTTTTACCTAATATTCATCAGACTTTGCTACCTAAGAAGGTTGGAAAGGGCAAAGGAGAAATTGGATCTGCTTCTCAAGAATTCTAG

Protein sequence

>MS.gene066535.t1

MSSTGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF