AlfalfaGEDB | MS.gene08205

M. sativa cultivar XinJiangDaYe / MS.gene08205

KEGG: K11128
GO: GO:0001522 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0022613 GO:0034641 GO:0042254 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1901360
PFAM: PF04410.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08205.t1	XP_013449501.1	98.7	151	2	0	1	151	1	151	3.90E-56	228

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08205.t1	Q8VZT0	88.1	151	18	0	1	151	1	151	7.4e-48	191.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08205.t1	A0A072U1E4	98.7	151	2	0	1	151	1	151	2.8e-56	228.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049361	MS.gene08205	0.807112	5.93E-50	-1.69E-46
MS.gene052666	MS.gene08205	0.815083	1.11E-51	-1.69E-46
MS.gene060483	MS.gene08205	0.801056	1.08E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene08205	MS.gene020871	PPI
MS.gene08205	MS.gene90957	PPI
MS.gene020385	MS.gene08205	PPI
MS.gene08205	MS.gene028300	PPI
MS.gene08205	MS.gene91415	PPI
MS.gene08205	MS.gene40020	PPI
MS.gene08205	MS.gene52775	PPI
MS.gene08205	MS.gene52097	PPI
MS.gene064180	MS.gene08205	PPI
MS.gene08205	MS.gene037324	PPI
MS.gene08205	MS.gene041623	PPI
MS.gene08205	MS.gene49958	PPI
MS.gene08205	MS.gene23466	PPI
MS.gene08205	MS.gene044591	PPI
MS.gene75062	MS.gene08205	PPI
MS.gene08205	MS.gene056257	PPI
MS.gene08205	MS.gene67483	PPI
MS.gene08205	MS.gene64804	PPI
MS.gene08205	MS.gene95472	PPI
MS.gene08205	MS.gene32091	PPI
MS.gene08205	MS.gene007453	PPI
MS.gene08205	MS.gene013415	PPI
MS.gene08205	MS.gene95471	PPI
MS.gene05689	MS.gene08205	PPI
MS.gene070298	MS.gene08205	PPI
MS.gene08205	MS.gene040439	PPI
MS.gene08205	MS.gene033017	PPI
MS.gene08205	MS.gene93333	PPI
MS.gene96983	MS.gene08205	PPI
MS.gene08205	MS.gene040757	PPI
MS.gene08205	MS.gene82828	PPI
MS.gene08205	MS.gene066300	PPI
MS.gene08205	MS.gene046040	PPI
MS.gene95758	MS.gene08205	PPI
MS.gene08205	MS.gene31729	PPI
MS.gene08205	MS.gene81244	PPI
MS.gene08205	MS.gene99744	PPI
MS.gene08205	MS.gene073734	PPI
MS.gene08205	MS.gene057730	PPI
MS.gene08205	MS.gene014351	PPI
MS.gene08205	MS.gene40019	PPI
MS.gene08205	MS.gene066301	PPI
MS.gene08205	MS.gene049387	PPI
MS.gene08205	MS.gene93859	PPI
MS.gene08205	MS.gene067210	PPI
MS.gene08205	MS.gene029242	PPI
MS.gene08205	MS.gene018682	PPI
MS.gene08205	MS.gene053058	PPI
MS.gene08205	MS.gene31515	PPI
MS.gene08205	MS.gene038800	PPI
MS.gene08205	MS.gene067951	PPI
MS.gene08205	MS.gene04336	PPI
MS.gene08205	MS.gene20045	PPI
MS.gene08205	MS.gene78112	PPI
MS.gene68888	MS.gene08205	PPI
MS.gene08205	MS.gene066996	PPI
MS.gene08205	MS.gene45344	PPI
MS.gene08205	MS.gene32419	PPI
MS.gene004705	MS.gene08205	PPI
MS.gene08205	MS.gene60922	PPI
MS.gene59503	MS.gene08205	PPI
MS.gene08205	MS.gene007492	PPI
MS.gene08205	MS.gene69331	PPI
MS.gene08205	MS.gene059340	PPI
MS.gene08205	MS.gene001986	PPI
MS.gene08205	MS.gene023154	PPI
MS.gene97932	MS.gene08205	PPI
MS.gene08205	MS.gene056443	PPI
MS.gene08205	MS.gene35157	PPI
MS.gene08205	MS.gene75060	PPI
MS.gene08205	MS.gene003501	PPI
MS.gene059422	MS.gene08205	PPI
MS.gene08205	MS.gene99649	PPI
MS.gene08205	MS.gene90954	PPI
MS.gene08205	MS.gene38035	PPI
MS.gene03801	MS.gene08205	PPI
MS.gene08205	MS.gene53798	PPI
MS.gene08205	MS.gene000714	PPI
MS.gene08205	MS.gene035097	PPI
MS.gene08205	MS.gene030293	PPI
MS.gene08205	MS.gene04159	PPI
MS.gene08205	MS.gene064036	PPI
MS.gene08205	MS.gene41916	PPI
MS.gene38222	MS.gene08205	PPI
MS.gene08205	MS.gene035396	PPI
MS.gene08205	MS.gene22456	PPI
MS.gene08205	MS.gene77076	PPI
MS.gene08205	MS.gene064831	PPI
MS.gene08205	MS.gene032628	PPI
MS.gene08205	MS.gene68979	PPI
MS.gene08205	MS.gene36492	PPI
MS.gene08205	MS.gene054186	PPI
MS.gene08205	MS.gene035486	PPI
MS.gene08205	MS.gene20043	PPI
MS.gene08205	MS.gene044498	PPI
MS.gene066348	MS.gene08205	PPI
MS.gene08205	MS.gene33879	PPI
MS.gene004704	MS.gene08205	PPI
MS.gene08205	MS.gene66341	PPI
MS.gene32092	MS.gene08205	PPI
MS.gene08205	MS.gene92245	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08205.t1	MTR_7g085640	99.010	202	2	0	1	202	1	202	4.46e-130	364

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08205.t1	AT3G03920	80.921	152	29	0	51	202	51	202	5.05e-66	202
MS.gene08205.t1	AT5G18180	83.962	106	16	1	51	156	38	142	3.67e-59	184

Find 82 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGGACGTGGTGGTGGTTTC+AGG	0.152779	7.3:+22985173	MS.gene08205:CDS
GGGAAAGTTGATGAAATATT+TGG	0.233909	7.3:+22983820	MS.gene08205:CDS
GGCCGTGGAGGTGGTGGTTT+TGG	0.280477	7.3:+22985076	MS.gene08205:CDS
CCACGGCCGCCACCTCTTGC+AGG	0.283854	7.3:-22983426	None:intergenic
GAGGACCTCTTCCACCCCTT+GGG	0.305063	7.3:-22985144	None:intergenic
CAGGGGAAGGGGCAGATTCT+AGG	0.306220	7.3:+22985192	MS.gene08205:CDS
GGAGGACCTCTTCCACCCCT+TGG	0.349525	7.3:-22985145	None:intergenic
GTTGCTACTTCATATGCATC+TGG	0.359032	7.3:+22983975	MS.gene08205:CDS
AGAGGTGGCGGCCGTGGTGG+TGG	0.384933	7.3:+22983432	MS.gene08205:CDS
GCTAGAGGCAAGAGCTTCCT+AGG	0.395733	7.3:-22984017	None:intergenic
CTGCAAAACATGACTCAGAT+TGG	0.398576	7.3:+22983799	MS.gene08205:CDS
CCTGCAAGAGGTGGCGGCCG+TGG	0.400024	7.3:+22983426	MS.gene08205:CDS
AGAGGTGGTGGCCGTGGAGG+TGG	0.402289	7.3:+22985100	MS.gene08205:CDS
GGTGGTGGTTTCAGGGGAAG+GGG	0.406506	7.3:+22985181	MS.gene08205:CDS
AGAGGTGGAGGCCGTGGAGG+TGG	0.421064	7.3:+22985067	MS.gene08205:CDS
TTTGGTAGAGGTGGTGGCCG+TGG	0.427705	7.3:+22985094	MS.gene08205:CDS
GGTGGTAGAGGTGGAGGCCG+TGG	0.431868	7.3:+22985061	MS.gene08205:CDS
GTGGTGGTGGTTTCAGGGGA+AGG	0.432062	7.3:+22985179	MS.gene08205:CDS
TTCGGCGGTGGACGTGGTGG+TGG	0.435593	7.3:+22983531	MS.gene08205:CDS
TATTGCAGGGGACAAGCATC+AGG	0.437663	7.3:+22985040	MS.gene08205:intron
GGTGGAGGCCGTGGAGGTGG+TGG	0.442100	7.3:+22985070	MS.gene08205:CDS
CCACCACCACGTCCACCTCT+TGG	0.448869	7.3:-22985166	None:intergenic
GGTGGTGGCCGTGGAGGTGG+TGG	0.449672	7.3:+22985103	MS.gene08205:CDS
GGTCGATTCGGCGGTGGACG+TGG	0.450036	7.3:+22983525	MS.gene08205:CDS
CACGGCCGCCACCTCTTGCA+GGG	0.459887	7.3:-22983425	None:intergenic
GGACGTGGTGGTGGTCGATT+CGG	0.462851	7.3:+22983513	MS.gene08205:CDS
GGCGGTGGACGTGGTGGTGG+AGG	0.463762	7.3:+22983534	MS.gene08205:CDS
TGGTGGTGGTTTCAGGGGAA+GGG	0.471183	7.3:+22985180	MS.gene08205:CDS
TGCAAAACATGACTCAGATT+GGG	0.474986	7.3:+22983800	MS.gene08205:CDS
GGTGGACGTGGTGGTGGAGG+TGG	0.479988	7.3:+22983537	MS.gene08205:CDS
TGGACGTGGTGGTGGTTTCA+GGG	0.482520	7.3:+22985174	MS.gene08205:CDS
CCAAGAGGTGGACGTGGTGG+TGG	0.483436	7.3:+22985166	MS.gene08205:CDS
GGACCTCCCTCCGAAGTTGT+AGG	0.483894	7.3:+22983573	MS.gene08205:CDS
AGGACCTCTTCCACCCCTTG+GGG	0.496542	7.3:-22985143	None:intergenic
GGCCGTGGTGGTGGATTCAG+AGG	0.507562	7.3:+22983441	MS.gene08205:CDS
GAAACTCACAGATTCATTGA+TGG	0.508035	7.3:-22983845	None:intergenic
CCACCACGTCCACCTCTTGG+AGG	0.512302	7.3:-22985163	None:intergenic
TTGCTACTTCATATGCATCT+GGG	0.519954	7.3:+22983976	MS.gene08205:CDS
GGACAAGCATCAGGTGGTAG+AGG	0.524486	7.3:+22985049	MS.gene08205:CDS
TTTCTATTAAAATGATGGAA+GGG	0.525814	7.3:+22983949	MS.gene08205:CDS
AGGGGAAGGGGCAGATTCTA+GGG	0.527082	7.3:+22985193	MS.gene08205:CDS
TACCCACGAACCTACAACTT+CGG	0.527744	7.3:-22983583	None:intergenic
GCATCAGGTGGTAGAGGTGG+AGG	0.530555	7.3:+22985055	MS.gene08205:CDS
ACGTTTATCCATGCTTGTGA+AGG	0.531931	7.3:+22983718	MS.gene08205:CDS
GCAAGAGGTGGCGGCCGTGG+TGG	0.532210	7.3:+22983429	MS.gene08205:CDS
CAAGCATCAGGTGGTAGAGG+TGG	0.537811	7.3:+22985052	MS.gene08205:CDS
GGATTCAGAGGTGGCCGAGA+TGG	0.541387	7.3:+22983453	MS.gene08205:CDS
TTCAGAGGTGGCCGAGATGG+TGG	0.544595	7.3:+22983456	MS.gene08205:CDS
GGATTCAGAGGTGGTCGTGA+TGG	0.545084	7.3:+22983477	MS.gene08205:CDS
GGTGGTGGTCGATTCGGCGG+TGG	0.547225	7.3:+22983519	MS.gene08205:CDS
CAGCATCTCCTTCACAAGCA+TGG	0.551580	7.3:-22983726	None:intergenic
GGACCTCTTCCACCCCTTGG+GGG	0.557362	7.3:-22985142	None:intergenic
GGTAGAGGTGGAGGCCGTGG+AGG	0.559108	7.3:+22985064	MS.gene08205:CDS
AGAGGTGGTCGTGATGGAGG+AGG	0.560037	7.3:+22983483	MS.gene08205:CDS
TTCAGAGGTGGTCGTGATGG+AGG	0.569077	7.3:+22983480	MS.gene08205:CDS
ACGGCCGCCACCTCTTGCAG+GGG	0.569761	7.3:-22983424	None:intergenic
CACGAACCTACAACTTCGGA+GGG	0.573435	7.3:-22983579	None:intergenic
CGTGGTGGTGGTCGATTCGG+CGG	0.575172	7.3:+22983516	MS.gene08205:CDS
AAACTCACAGATTCATTGAT+GGG	0.576692	7.3:-22983844	None:intergenic
GGCCGAGATGGTGGATTCAG+AGG	0.581009	7.3:+22983465	MS.gene08205:CDS
GGTAGAGGTGGTGGCCGTGG+AGG	0.585512	7.3:+22985097	MS.gene08205:CDS
GGAGGTGGATTTCGTGATGA+AGG	0.587672	7.3:+22983552	MS.gene08205:CDS
TGCTACTTCATATGCATCTG+GGG	0.587818	7.3:+22983977	MS.gene08205:CDS
GTGAGAACATACTTCGGCTG+AGG	0.591544	7.3:-22984050	None:intergenic
CACGAAAACCACCACCTCCA+CGG	0.595827	7.3:-22985111	None:intergenic
CGATTCGGCGGTGGACGTGG+TGG	0.605050	7.3:+22983528	MS.gene08205:CDS
CCACGAACCTACAACTTCGG+AGG	0.605907	7.3:-22983580	None:intergenic
CCTCCAAGAGGTGGACGTGG+TGG	0.609010	7.3:+22985163	MS.gene08205:CDS
GGAAGAGGTCCTCCAAGAGG+TGG	0.617947	7.3:+22985154	MS.gene08205:CDS
GGTCCTCCAAGAGGTGGACG+TGG	0.619296	7.3:+22985160	MS.gene08205:CDS
CGAGATGGTGGATTCAGAGG+TGG	0.625804	7.3:+22983468	MS.gene08205:CDS
CACCTCTGAATCCACCATCT+CGG	0.628054	7.3:-22983467	None:intergenic
CTAGAGGCAAGAGCTTCCTA+GGG	0.630481	7.3:-22984016	None:intergenic
TACCAAAACCACCACCTCCA+CGG	0.632501	7.3:-22985078	None:intergenic
GGACGTGGTGGTGGTTTCAG+GGG	0.633942	7.3:+22985175	MS.gene08205:CDS
TGAGGAAGAAATCTTGCTAG+AGG	0.638685	7.3:-22984032	None:intergenic
CGGCCGCCACCTCTTGCAGG+GGG	0.639435	7.3:-22983423	None:intergenic
CGTGGTGGTGGATTCAGAGG+TGG	0.644993	7.3:+22983444	MS.gene08205:CDS
GAACCTACAACTTCGGAGGG+AGG	0.658354	7.3:-22983576	None:intergenic
GGTGGAAGAGGTCCTCCAAG+AGG	0.663197	7.3:+22985151	MS.gene08205:CDS
TGCAGGGGACAAGCATCAGG+TGG	0.672433	7.3:+22985043	MS.gene08205:intron
CACCTCTGAATCCACCACCA+CGG	0.697043	7.3:-22983443	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CAAATATCAAAAACTAATTT+TGG	-	chr7.3:22984708-22984727	None:intergenic	15.0%
!!!	CTAATATCAAAAACTAATTT+TGG	-	chr7.3:22984834-22984853	None:intergenic	15.0%
!!!	TATTCATTTTTTCAGTAAAA+CGG	-	chr7.3:22984515-22984534	None:intergenic	15.0%
!!!	TTTTTGATATTTGCTATATA+CGG	+	chr7.3:22984715-22984734	MS.gene08205:intron	15.0%
!!	ACATCAGATAAAAATAAGAA+GGG	+	chr7.3:22984780-22984799	MS.gene08205:intron	20.0%
!!	CATAAACAAGGAAATTAATT+AGG	-	chr7.3:22984154-22984173	None:intergenic	20.0%
!!	TACATCAGATAAAAATAAGA+AGG	+	chr7.3:22984779-22984798	MS.gene08205:intron	20.0%
!!!	AAAAAATGGAATTTTCTCAT+TGG	-	chr7.3:22983764-22983783	None:intergenic	20.0%
!!!	ATTTTTTATTGGCTTTTGAA+AGG	+	chr7.3:22984977-22984996	MS.gene08205:intron	20.0%
!!!	CTTATATGTTTTGTTGAAAT+GGG	+	chr7.3:22983888-22983907	MS.gene08205:intron	20.0%
!!!	GTACTTTTCTATTAAAATGA+TGG	+	chr7.3:22983944-22983963	MS.gene08205:intron	20.0%
!!!	TAAATAGGAGCATTAAAAAA+TGG	-	chr7.3:22983778-22983797	None:intergenic	20.0%
!!!	TCTTATATGTTTTGTTGAAA+TGG	+	chr7.3:22983887-22983906	MS.gene08205:intron	20.0%
!!!	TTTCTATTAAAATGATGGAA+GGG	+	chr7.3:22983949-22983968	MS.gene08205:CDS	20.0%
!!!	TTTTCTATTAAAATGATGGA+AGG	+	chr7.3:22983948-22983967	MS.gene08205:CDS	20.0%
!!!	TTTTTTATTGGCTTTTGAAA+GGG	+	chr7.3:22984978-22984997	MS.gene08205:intron	20.0%
!	AATAAATTGTTGTATGCAGT+TGG	+	chr7.3:22984941-22984960	MS.gene08205:intron	25.0%
!	AATTGACTGATTATTATTGC+AGG	+	chr7.3:22985026-22985045	MS.gene08205:intron	25.0%
!	ATACTTGTTTGTTTGTTCAA+AGG	+	chr7.3:22984568-22984587	MS.gene08205:intron	25.0%
!	ATCTGATGTAACATCAATTA+GGG	-	chr7.3:22984769-22984788	None:intergenic	25.0%
!	ATTGACTGATTATTATTGCA+GGG	+	chr7.3:22985027-22985046	MS.gene08205:intron	25.0%
!	CATACAAAACAATTAACACA+AGG	-	chr7.3:22984903-22984922	None:intergenic	25.0%
!	CATCAGATAAAAATAAGAAG+GGG	+	chr7.3:22984781-22984800	MS.gene08205:intron	25.0%
!	TATCTGATGTAACATCAATT+AGG	-	chr7.3:22984770-22984789	None:intergenic	25.0%
!	TCAAAGGATTCTTATTGTTA+TGG	+	chr7.3:22984584-22984603	MS.gene08205:intron	25.0%
!!	AATTTCCTTGTTTATGTTTG+TGG	+	chr7.3:22984158-22984177	MS.gene08205:intron	25.0%
!!	ACTTAGACAGGTTAATTTTA+AGG	-	chr7.3:22984078-22984097	None:intergenic	25.0%
!!	ATTGTACAGTTGATGTTAAA+TGG	+	chr7.3:22984098-22984117	MS.gene08205:intron	25.0%
!!	TTGTACAGTTGATGTTAAAT+GGG	+	chr7.3:22984099-22984118	MS.gene08205:intron	25.0%
!!!	CTTTGCTTGGAATTTTTTAT+TGG	+	chr7.3:22984966-22984985	MS.gene08205:intron	25.0%
	AAACTCACAGATTCATTGAT+GGG	-	chr7.3:22983847-22983866	None:intergenic	30.0%
	ACAATTAACACAAGGAAATG+TGG	-	chr7.3:22984895-22984914	None:intergenic	30.0%
	CAATTAACACAAGGAAATGT+GGG	-	chr7.3:22984894-22984913	None:intergenic	30.0%
	CATTACCACAAACATAAACA+AGG	-	chr7.3:22984166-22984185	None:intergenic	30.0%
	TTGACTGATTATTATTGCAG+GGG	+	chr7.3:22985028-22985047	MS.gene08205:intron	30.0%
!	CTATTTCTTGATTGCTATGT+TGG	+	chr7.3:22984212-22984231	MS.gene08205:intron	30.0%
!	GTCATGTTTTGCAGATAAAT+AGG	-	chr7.3:22983793-22983812	None:intergenic	30.0%
!!	GGGAAAGTTGATGAAATATT+TGG	+	chr7.3:22983820-22983839	MS.gene08205:CDS	30.0%
!!	GTTTAATTTGATGTTTGCAG+AGG	+	chr7.3:22983690-22983709	MS.gene08205:intron	30.0%
!!	TGAAAGGGTATTACAATTGA+TGG	+	chr7.3:22984993-22985012	MS.gene08205:intron	30.0%
	AAAATTAGACATCTGCAGCA+TGG	-	chr7.3:22984630-22984649	None:intergenic	35.0%
	ATCTGTGAGTTTCTCTTTGT+TGG	+	chr7.3:22983855-22983874	MS.gene08205:intron	35.0%
	CAACTGTACAATACTTAGAC+AGG	-	chr7.3:22984090-22984109	None:intergenic	35.0%
	GAAACTCACAGATTCATTGA+TGG	-	chr7.3:22983848-22983867	None:intergenic	35.0%
	GCAGATTACATCAAGACAAA+AGG	-	chr7.3:22984541-22984560	None:intergenic	35.0%
	TGCAAAACATGACTCAGATT+GGG	+	chr7.3:22983800-22983819	MS.gene08205:CDS	35.0%
!	ACAAGTTTTACATTGACCCT+AGG	+	chr7.3:22984000-22984019	MS.gene08205:CDS	35.0%
!	TTGCTACTTCATATGCATCT+GGG	+	chr7.3:22983976-22983995	MS.gene08205:CDS	35.0%
!!	GTCTAATTTTGAGTGTGAGA+GGG	+	chr7.3:22984640-22984659	MS.gene08205:intron	35.0%
!!	TGTCTAATTTTGAGTGTGAG+AGG	+	chr7.3:22984639-22984658	MS.gene08205:intron	35.0%
	AAGGCAGTGAGAACATACTT+CGG	-	chr7.3:22984059-22984078	None:intergenic	40.0%
	ACATCAATTAGGGACAGTAC+AGG	-	chr7.3:22984759-22984778	None:intergenic	40.0%
	ACGTTTATCCATGCTTGTGA+AGG	+	chr7.3:22983718-22983737	MS.gene08205:CDS	40.0%
	CAGTTCACACATTCTTCACA+TGG	-	chr7.3:22984377-22984396	None:intergenic	40.0%
	CTGCAAAACATGACTCAGAT+TGG	+	chr7.3:22983799-22983818	MS.gene08205:CDS	40.0%
	TAACACAAGGAAATGTGGGA+CGG	-	chr7.3:22984890-22984909	None:intergenic	40.0%
	TATGCAGTTGGATCTTTGCT+TGG	+	chr7.3:22984953-22984972	MS.gene08205:intron	40.0%
	TGAGGAAGAAATCTTGCTAG+AGG	-	chr7.3:22984035-22984054	None:intergenic	40.0%
!	GTTGCTACTTCATATGCATC+TGG	+	chr7.3:22983975-22983994	MS.gene08205:CDS	40.0%
!	TGCTACTTCATATGCATCTG+GGG	+	chr7.3:22983977-22983996	MS.gene08205:CDS	40.0%
	GGTTACACTCTAGCATGTAG+AGG	-	chr7.3:22984863-22984882	None:intergenic	45.0%
	TACCCACGAACCTACAACTT+CGG	-	chr7.3:22983586-22983605	None:intergenic	45.0%
!!	TTGAGTGTGAGAGGGTGTTA+AGG	+	chr7.3:22984648-22984667	MS.gene08205:intron	45.0%
	CACCTCTGAATCCACCATCT+CGG	-	chr7.3:22983470-22983489	None:intergenic	50.0%
	CACGAACCTACAACTTCGGA+GGG	-	chr7.3:22983582-22983601	None:intergenic	50.0%
	CAGCATCTCCTTCACAAGCA+TGG	-	chr7.3:22983729-22983748	None:intergenic	50.0%
	CTAGAGGCAAGAGCTTCCTA+GGG	-	chr7.3:22984019-22984038	None:intergenic	50.0%
	CTCCGAAGTTGTAGGTTCGT+GGG	+	chr7.3:22983581-22983600	MS.gene08205:intron	50.0%
	GTGAGAACATACTTCGGCTG+AGG	-	chr7.3:22984053-22984072	None:intergenic	50.0%
	TACCAAAACCACCACCTCCA+CGG	-	chr7.3:22985081-22985100	None:intergenic	50.0%
	TATTGCAGGGGACAAGCATC+AGG	+	chr7.3:22985040-22985059	MS.gene08205:intron	50.0%
!	GGAGGTGGATTTCGTGATGA+AGG	+	chr7.3:22983552-22983571	MS.gene08205:CDS	50.0%
!!	AGAGGGTGTTAAGGAGAGGT+GGG	+	chr7.3:22984657-22984676	MS.gene08205:intron	50.0%
!!	AGGTGGTGGTTTTCGTGGAA+GGG	+	chr7.3:22985117-22985136	MS.gene08205:CDS	50.0%
!!	TGTGAGAGGGTGTTAAGGAG+AGG	+	chr7.3:22984653-22984672	MS.gene08205:intron	50.0%
	AAGGAAATGTGGGACGGTGC+AGG	-	chr7.3:22984884-22984903	None:intergenic	55.0%
	CAAGCATCAGGTGGTAGAGG+TGG	+	chr7.3:22985052-22985071	MS.gene08205:CDS	55.0%
	CACCTCTGAATCCACCACCA+CGG	-	chr7.3:22983446-22983465	None:intergenic	55.0%
	CACGAAAACCACCACCTCCA+CGG	-	chr7.3:22985114-22985133	None:intergenic	55.0%
	CCACGAACCTACAACTTCGG+AGG	-	chr7.3:22983583-22983602	None:intergenic	55.0%
	CCTCCGAAGTTGTAGGTTCG+TGG	+	chr7.3:22983580-22983599	MS.gene08205:intron	55.0%
	GAACCTACAACTTCGGAGGG+AGG	-	chr7.3:22983579-22983598	None:intergenic	55.0%
	GCTAGAGGCAAGAGCTTCCT+AGG	-	chr7.3:22984020-22984039	None:intergenic	55.0%
	GGACAAGCATCAGGTGGTAG+AGG	+	chr7.3:22985049-22985068	MS.gene08205:CDS	55.0%
	GGATTCAGAGGTGGTCGTGA+TGG	+	chr7.3:22983477-22983496	MS.gene08205:CDS	55.0%
	TTCAGAGGTGGTCGTGATGG+AGG	+	chr7.3:22983480-22983499	MS.gene08205:CDS	55.0%
!!	CGAGATGGTGGATTCAGAGG+TGG	+	chr7.3:22983468-22983487	MS.gene08205:CDS	55.0%
!!	CGTGATGGAGGAGGTTTTCG+TGG	+	chr7.3:22983492-22983511	MS.gene08205:CDS	55.0%
!!	GAGAGGGTGTTAAGGAGAGG+TGG	+	chr7.3:22984656-22984675	MS.gene08205:intron	55.0%
!!	GAGGTGGTGGTTTTCGTGGA+AGG	+	chr7.3:22985116-22985135	MS.gene08205:CDS	55.0%
!!	GGTGGTGGTTTTCGTGGAAG+GGG	+	chr7.3:22985118-22985137	MS.gene08205:CDS	55.0%
!!	TGGACGTGGTGGTGGTTTCA+GGG	+	chr7.3:22985174-22985193	MS.gene08205:CDS	55.0%
!!	TGGTGGTGGTTTCAGGGGAA+GGG	+	chr7.3:22985180-22985199	MS.gene08205:CDS	55.0%
!!!	GGAGGTGGTGGTTTTGGTAG+AGG	+	chr7.3:22985082-22985101	MS.gene08205:CDS	55.0%
!!!	GGTGGTGGTTTTGGTAGAGG+TGG	+	chr7.3:22985085-22985104	MS.gene08205:CDS	55.0%
!!!	GGTGGTTTTGGTAGAGGTGG+TGG	+	chr7.3:22985088-22985107	MS.gene08205:CDS	55.0%
	AGGACCTCTTCCACCCCTTG+GGG	-	chr7.3:22985146-22985165	None:intergenic	60.0%
	ATGAGACCCCCTGCAAGAGG+TGG	+	chr7.3:22983417-22983436	MS.gene08205:CDS	60.0%
	GAGGACCTCTTCCACCCCTT+GGG	-	chr7.3:22985147-22985166	None:intergenic	60.0%
	GCATCAGGTGGTAGAGGTGG+AGG	+	chr7.3:22985055-22985074	MS.gene08205:CDS	60.0%
	GGAAGAGGTCCTCCAAGAGG+TGG	+	chr7.3:22985154-22985173	MS.gene08205:CDS	60.0%
	GGACCTCCCTCCGAAGTTGT+AGG	+	chr7.3:22983573-22983592	MS.gene08205:CDS	60.0%
	GGATTCAGAGGTGGCCGAGA+TGG	+	chr7.3:22983453-22983472	MS.gene08205:CDS	60.0%
	GGTGGAAGAGGTCCTCCAAG+AGG	+	chr7.3:22985151-22985170	MS.gene08205:CDS	60.0%
	TGCAGGGGACAAGCATCAGG+TGG	+	chr7.3:22985043-22985062	MS.gene08205:intron	60.0%
	TTCAGAGGTGGCCGAGATGG+TGG	+	chr7.3:22983456-22983475	MS.gene08205:CDS	60.0%
!	AGAGGTGGTCGTGATGGAGG+AGG	+	chr7.3:22983483-22983502	MS.gene08205:CDS	60.0%
!	GGAGGAGGTTTTCGTGGACG+TGG	+	chr7.3:22983498-22983517	MS.gene08205:CDS	60.0%
!	GGAGGTTTTCGTGGACGTGG+TGG	+	chr7.3:22983501-22983520	MS.gene08205:CDS	60.0%
!	GGTGGTGGTTTCAGGGGAAG+GGG	+	chr7.3:22985181-22985200	MS.gene08205:CDS	60.0%
!	GGTTTTCGTGGACGTGGTGG+TGG	+	chr7.3:22983504-22983523	MS.gene08205:CDS	60.0%
!	TTTGGTAGAGGTGGTGGCCG+TGG	+	chr7.3:22985094-22985113	MS.gene08205:CDS	60.0%
!!	CGTGGAGGTGGTGGTTTTCG+TGG	+	chr7.3:22985112-22985131	MS.gene08205:CDS	60.0%
!!	CGTGGTGGTGGATTCAGAGG+TGG	+	chr7.3:22983444-22983463	MS.gene08205:CDS	60.0%
!!	GGACGTGGTGGTGGTCGATT+CGG	+	chr7.3:22983513-22983532	MS.gene08205:CDS	60.0%
!!	GGACGTGGTGGTGGTTTCAG+GGG	+	chr7.3:22985175-22985194	MS.gene08205:CDS	60.0%
!!	GGCCGAGATGGTGGATTCAG+AGG	+	chr7.3:22983465-22983484	MS.gene08205:CDS	60.0%
!!	GTGGACGTGGTGGTGGTTTC+AGG	+	chr7.3:22985173-22985192	MS.gene08205:CDS	60.0%
!!	GTGGTGGTGGTTTCAGGGGA+AGG	+	chr7.3:22985179-22985198	MS.gene08205:CDS	60.0%
	AGACCCCCTGCAAGAGGTGG+CGG	+	chr7.3:22983420-22983439	MS.gene08205:CDS	65.0%
	CCAAGAGGTGGACGTGGTGG+TGG	+	chr7.3:22985166-22985185	MS.gene08205:CDS	65.0%
	CCACCACCACGTCCACCTCT+TGG	-	chr7.3:22985169-22985188	None:intergenic	65.0%
	CCACCACGTCCACCTCTTGG+AGG	-	chr7.3:22985166-22985185	None:intergenic	65.0%
	CCTCCAAGAGGTGGACGTGG+TGG	+	chr7.3:22985163-22985182	MS.gene08205:CDS	65.0%
	GGACCTCTTCCACCCCTTGG+GGG	-	chr7.3:22985145-22985164	None:intergenic	65.0%
	GGAGGACCTCTTCCACCCCT+TGG	-	chr7.3:22985148-22985167	None:intergenic	65.0%
	GGTCCTCCAAGAGGTGGACG+TGG	+	chr7.3:22985160-22985179	MS.gene08205:CDS	65.0%
	TCGTGGAAGGGGTCCCCCAA+GGG	+	chr7.3:22985129-22985148	MS.gene08205:CDS	65.0%
	TTCGTGGAAGGGGTCCCCCA+AGG	+	chr7.3:22985128-22985147	MS.gene08205:CDS	65.0%
!!	CGTGGTGGTGGTCGATTCGG+CGG	+	chr7.3:22983516-22983535	MS.gene08205:CDS	65.0%
!!	GGCCGTGGAGGTGGTGGTTT+TGG	+	chr7.3:22985076-22985095	MS.gene08205:CDS	65.0%
!!	GGCCGTGGTGGTGGATTCAG+AGG	+	chr7.3:22983441-22983460	MS.gene08205:CDS	65.0%
	ACGGCCGCCACCTCTTGCAG+GGG	-	chr7.3:22983427-22983446	None:intergenic	70.0%
	AGAGGTGGAGGCCGTGGAGG+TGG	+	chr7.3:22985067-22985086	MS.gene08205:CDS	70.0%
	CACGGCCGCCACCTCTTGCA+GGG	-	chr7.3:22983428-22983447	None:intergenic	70.0%
	CGTGGAAGGGGTCCCCCAAG+GGG	+	chr7.3:22985130-22985149	MS.gene08205:CDS	70.0%
	GGTAGAGGTGGAGGCCGTGG+AGG	+	chr7.3:22985064-22985083	MS.gene08205:CDS	70.0%
	GGTCCCCCAAGGGGTGGAAG+AGG	+	chr7.3:22985139-22985158	MS.gene08205:CDS	70.0%
	GGTGGTAGAGGTGGAGGCCG+TGG	+	chr7.3:22985061-22985080	MS.gene08205:CDS	70.0%
	TTCGGCGGTGGACGTGGTGG+TGG	+	chr7.3:22983531-22983550	MS.gene08205:CDS	70.0%
!	AGAGGTGGTGGCCGTGGAGG+TGG	+	chr7.3:22985100-22985119	MS.gene08205:CDS	70.0%
!	CGATTCGGCGGTGGACGTGG+TGG	+	chr7.3:22983528-22983547	MS.gene08205:CDS	70.0%
!	GGTAGAGGTGGTGGCCGTGG+AGG	+	chr7.3:22985097-22985116	MS.gene08205:CDS	70.0%
!!	GGTCGATTCGGCGGTGGACG+TGG	+	chr7.3:22983525-22983544	MS.gene08205:CDS	70.0%
!!	GGTGGACGTGGTGGTGGAGG+TGG	+	chr7.3:22983537-22983556	MS.gene08205:CDS	70.0%
!!	GGTGGTGGTCGATTCGGCGG+TGG	+	chr7.3:22983519-22983538	MS.gene08205:CDS	70.0%
	CCACGGCCGCCACCTCTTGC+AGG	-	chr7.3:22983429-22983448	None:intergenic	75.0%
	CGGCCGCCACCTCTTGCAGG+GGG	-	chr7.3:22983426-22983445	None:intergenic	75.0%
	GGAAGGGGTCCCCCAAGGGG+TGG	+	chr7.3:22985133-22985152	MS.gene08205:CDS	75.0%
	GGTGGAGGCCGTGGAGGTGG+TGG	+	chr7.3:22985070-22985089	MS.gene08205:CDS	75.0%
!	AGAGGTGGCGGCCGTGGTGG+TGG	+	chr7.3:22983432-22983451	MS.gene08205:CDS	75.0%
!	CCTGCAAGAGGTGGCGGCCG+TGG	+	chr7.3:22983426-22983445	MS.gene08205:CDS	75.0%
!	GCAAGAGGTGGCGGCCGTGG+TGG	+	chr7.3:22983429-22983448	MS.gene08205:CDS	75.0%
!	GGTGGTGGCCGTGGAGGTGG+TGG	+	chr7.3:22985103-22985122	MS.gene08205:CDS	75.0%
!!	GGCGGTGGACGTGGTGGTGG+AGG	+	chr7.3:22983534-22983553	MS.gene08205:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	22983417	22985213	22983417	ID=MS.gene08205
chr7.3	mRNA	22983417	22985213	22983417	ID=MS.gene08205.t1;Parent=MS.gene08205
chr7.3	exon	22983417	22983594	22983417	ID=MS.gene08205.t1.exon1;Parent=MS.gene08205.t1
chr7.3	CDS	22983417	22983594	22983417	ID=cds.MS.gene08205.t1;Parent=MS.gene08205.t1
chr7.3	exon	22983710	22983858	22983710	ID=MS.gene08205.t1.exon2;Parent=MS.gene08205.t1
chr7.3	CDS	22983710	22983858	22983710	ID=cds.MS.gene08205.t1;Parent=MS.gene08205.t1
chr7.3	exon	22983945	22984060	22983945	ID=MS.gene08205.t1.exon3;Parent=MS.gene08205.t1
chr7.3	CDS	22983945	22984060	22983945	ID=cds.MS.gene08205.t1;Parent=MS.gene08205.t1
chr7.3	exon	22985048	22985213	22985048	ID=MS.gene08205.t1.exon4;Parent=MS.gene08205.t1
chr7.3	CDS	22985048	22985213	22985048	ID=cds.MS.gene08205.t1;Parent=MS.gene08205.t1

Gene Sequence

>MS.gene08205

ATGAGACCCCCTGCAAGAGGTGGCGGCCGTGGTGGTGGATTCAGAGGTGGCCGAGATGGTGGATTCAGAGGTGGTCGTGATGGAGGAGGTTTTCGTGGACGTGGTGGTGGTCGATTCGGCGGTGGACGTGGTGGTGGAGGTGGATTTCGTGATGAAGGACCTCCCTCCGAAGTTGTAGGTTCGTGGGTAGAACTTAGTTTTATCTATAAGCTTTTTGTTTTTGTAAAAATGAGATTTTTATTTTTATTTTGTGTTTTATTGAGTTGTTGTTTTGTTTAATTTGATGTTTGCAGAGGTTTCAACGTTTATCCATGCTTGTGAAGGAGATGCTGTTACAAAGCTTACCAATGAGAAAATTCCATTTTTTAATGCTCCTATTTATCTGCAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGTCCCATCAATGAATCTGTGAGTTTCTCTTTGTTGGTTGATTTTATCTTATATGTTTTGTTGAAATGGGTTTTTATGTAATTTTTGATTTGTTTGAATTGCAGTACTTTTCTATTAAAATGATGGAAGGGATTGTTGCTACTTCATATGCATCTGGGGACAAGTTTTACATTGACCCTAGGAAGCTCTTGCCTCTAGCAAGATTTCTTCCTCAGCCGAAGTATGTTCTCACTGCCTTAAAATTAACCTGTCTAAGTATTGTACAGTTGATGTTAAATGGGTATTGAAAGTAGTTTGACATAAAGATTTTCCTAATTAATTTCCTTGTTTATGTTTGTGGTAATGTTTGTTTTGTATATCTAACACTTGAACTATTTCTTGATTGCTATGTTGGTGTATTGTGTTGCATATCATAGCATGATGCTATTCATGCATCATTACTTGAACTATTTCTTGATTGCTATGTTGGTGTATTGTGTTGCATATCATAGCATGATGCTATTCATGCATCATTACTGTTATGTTTGTTATAACCATGTGAAGAATGTGTGAACTGCTTTATATTTCATATGTTGTTACTGTTATGTTTGCAGTTTGTTAAAAGTTGTGCTTATTTCGTTGTGAGCATGCAGTGCTTCTATTATTAACTAAATTAATGATTGCTTGTGAAACCGTTTTACTGAAAAAATGAATATGACCTTTTGTCTTGATGTAATCTGCTATGATTATACTTGTTTGTTTGTTCAAAGGATTCTTATTGTTATGGTTGTTGAGACATGCATTAGACCATGCTGCAGATGTCTAATTTTGAGTGTGAGAGGGTGTTAAGGAGAGGTGGGTGATGATTTACGTAGAATGATGAAGCCAAAATTAGTTTTTGATATTTGCTATATACGGATACATGCTAGAATGTAACCTGTACTGTCCCTAATTGATGTTACATCAGATAAAAATAAGAAGGGGCAATGAATTACTGAGATATGATGAAAGCCAAAATTAGTTTTTGATATTAGCTACATCCTCTACATGCTAGAGTGTAACCTGCACCGTCCCACATTTCCTTGTGTTAATTGTTTTGTATGCAGTTCTGCATAAAATAAAATAAATTGTTGTATGCAGTTGGATCTTTGCTTGGAATTTTTTATTGGCTTTTGAAAGGGTATTACAATTGATGGAAGTTAACACAATTGACTGATTATTATTGCAGGGGACAAGCATCAGGTGGTAGAGGTGGAGGCCGTGGAGGTGGTGGTTTTGGTAGAGGTGGTGGCCGTGGAGGTGGTGGTTTTCGTGGAAGGGGTCCCCCAAGGGGTGGAAGAGGTCCTCCAAGAGGTGGACGTGGTGGTGGTTTCAGGGGAAGGGGCAGATTCTAG

Protein sequence

>MS.gene08205.t1

MRPPARGGGRGGGFRGGRDGGFRGGRDGGGFRGRGGGRFGGGRGGGGGFRDEGPPSEVVEVSTFIHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIVATSYASGDKFYIDPRKLLPLARFLPQPKGQASGGRGGGRGGGGFGRGGGRGGGGFRGRGPPRGGRGPPRGGRGGGFRGRGRF