Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072432.t1 | RHN49328.1 | 97.1 | 139 | 4 | 0 | 1 | 139 | 57 | 195 | 2.40E-65 | 258.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072432.t1 | O65759 | 95.7 | 139 | 6 | 0 | 1 | 139 | 1 | 139 | 1.4e-66 | 253.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072432.t1 | A2Q3H4 | 97.1 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 1.7e-65 | 258.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072432.t1 | MTR_7g114060 | 97.122 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 1.04e-94 | 269 |
MS.gene072432.t1 | MTR_7g114040 | 97.122 | 139 | 4 | 0 | 1 | 139 | 1 | 139 | 1.04e-94 | 269 |
MS.gene072432.t1 | MTR_7g108320 | 95.070 | 142 | 4 | 1 | 1 | 139 | 1 | 142 | 3.24e-92 | 263 |
MS.gene072432.t1 | MTR_7g093910 | 85.401 | 137 | 20 | 0 | 3 | 139 | 6 | 142 | 4.01e-82 | 238 |
MS.gene072432.t1 | MTR_7g114050 | 87.023 | 131 | 6 | 2 | 9 | 139 | 11 | 130 | 9.58e-73 | 213 |
MS.gene072432.t1 | MTR_2g082510 | 87.603 | 121 | 11 | 1 | 10 | 126 | 3 | 123 | 6.39e-70 | 206 |
MS.gene072432.t1 | MTR_2g082220 | 86.290 | 124 | 13 | 1 | 10 | 129 | 3 | 126 | 7.87e-70 | 206 |
MS.gene072432.t1 | MTR_2g096610 | 75.000 | 120 | 30 | 0 | 18 | 137 | 21 | 140 | 7.95e-60 | 181 |
MS.gene072432.t1 | MTR_7g113160 | 76.033 | 121 | 25 | 1 | 4 | 124 | 15 | 131 | 3.14e-59 | 180 |
MS.gene072432.t1 | MTR_4g063280 | 72.441 | 127 | 34 | 1 | 1 | 127 | 1 | 126 | 2.43e-58 | 177 |
MS.gene072432.t1 | MTR_8g086640 | 79.817 | 109 | 22 | 0 | 19 | 127 | 24 | 132 | 2.79e-58 | 177 |
MS.gene072432.t1 | MTR_4g064005 | 79.817 | 109 | 22 | 0 | 19 | 127 | 24 | 132 | 4.57e-58 | 177 |
MS.gene072432.t1 | MTR_2g096570 | 81.132 | 106 | 20 | 0 | 19 | 124 | 23 | 128 | 4.86e-58 | 177 |
MS.gene072432.t1 | MTR_4g071150 | 81.132 | 106 | 20 | 0 | 19 | 124 | 24 | 129 | 6.90e-58 | 177 |
MS.gene072432.t1 | MTR_4g064967 | 81.132 | 106 | 20 | 0 | 19 | 124 | 24 | 129 | 9.83e-58 | 176 |
MS.gene072432.t1 | MTR_4g063410 | 80.189 | 106 | 21 | 0 | 19 | 124 | 24 | 129 | 1.90e-57 | 176 |
MS.gene072432.t1 | MTR_6g005150 | 61.345 | 119 | 37 | 2 | 19 | 136 | 26 | 136 | 3.71e-42 | 136 |
MS.gene072432.t1 | MTR_1g011750 | 63.551 | 107 | 37 | 2 | 18 | 123 | 25 | 130 | 1.59e-39 | 129 |
MS.gene072432.t1 | MTR_1g011850 | 63.551 | 107 | 37 | 2 | 18 | 123 | 25 | 130 | 1.59e-39 | 129 |
MS.gene072432.t1 | MTR_1g114050 | 62.617 | 107 | 38 | 2 | 20 | 125 | 24 | 129 | 1.90e-38 | 127 |
MS.gene072432.t1 | MTR_1g071040 | 63.208 | 106 | 37 | 2 | 21 | 125 | 28 | 132 | 3.90e-38 | 126 |
MS.gene072432.t1 | MTR_4g063300 | 79.730 | 74 | 15 | 0 | 40 | 113 | 10 | 83 | 9.89e-36 | 119 |
MS.gene072432.t1 | MTR_4g005910 | 91.111 | 45 | 4 | 0 | 82 | 126 | 4 | 48 | 1.24e-23 | 87.0 |
MS.gene072432.t1 | MTR_7g010440 | 69.697 | 66 | 20 | 0 | 73 | 138 | 122 | 187 | 5.68e-23 | 91.7 |
MS.gene072432.t1 | MTR_4g048490 | 45.714 | 105 | 28 | 2 | 19 | 123 | 26 | 101 | 6.65e-20 | 79.0 |
MS.gene072432.t1 | MTR_1g069770 | 55.224 | 67 | 30 | 0 | 62 | 128 | 32 | 98 | 6.85e-19 | 76.6 |
MS.gene072432.t1 | MTR_7g027610 | 40.323 | 124 | 39 | 4 | 6 | 125 | 4 | 96 | 2.25e-16 | 70.1 |
MS.gene072432.t1 | MTR_0653s0030 | 40.000 | 100 | 35 | 2 | 3 | 102 | 21 | 95 | 1.95e-12 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072432.t1 | AT1G54690 | 94.118 | 136 | 8 | 0 | 4 | 139 | 7 | 142 | 9.16e-90 | 257 |
MS.gene072432.t1 | AT1G08880 | 93.382 | 136 | 9 | 0 | 4 | 139 | 7 | 142 | 2.28e-89 | 256 |
MS.gene072432.t1 | AT4G27230 | 87.097 | 124 | 12 | 1 | 10 | 129 | 3 | 126 | 9.93e-71 | 208 |
MS.gene072432.t1 | AT4G27230 | 87.097 | 124 | 12 | 1 | 10 | 129 | 3 | 126 | 9.93e-71 | 208 |
MS.gene072432.t1 | AT5G54640 | 86.290 | 124 | 13 | 1 | 10 | 129 | 3 | 126 | 9.30e-70 | 206 |
MS.gene072432.t1 | AT3G20670 | 85.484 | 124 | 14 | 1 | 10 | 129 | 3 | 126 | 1.04e-68 | 203 |
MS.gene072432.t1 | AT1G51060 | 83.871 | 124 | 16 | 1 | 10 | 129 | 3 | 126 | 1.49e-68 | 203 |
MS.gene072432.t1 | AT5G59870 | 72.308 | 130 | 31 | 2 | 1 | 125 | 1 | 130 | 1.56e-60 | 183 |
MS.gene072432.t1 | AT5G27670 | 70.588 | 136 | 34 | 2 | 4 | 137 | 14 | 145 | 1.16e-57 | 176 |
MS.gene072432.t1 | AT5G02560 | 78.182 | 110 | 24 | 0 | 18 | 127 | 23 | 132 | 1.81e-57 | 176 |
MS.gene072432.t1 | AT5G02560 | 64.179 | 134 | 24 | 1 | 18 | 127 | 23 | 156 | 4.48e-52 | 163 |
MS.gene072432.t1 | AT1G52740 | 57.377 | 122 | 43 | 3 | 12 | 125 | 12 | 132 | 6.98e-39 | 128 |
MS.gene072432.t1 | AT2G38810 | 62.617 | 107 | 38 | 2 | 18 | 123 | 27 | 132 | 1.15e-38 | 127 |
MS.gene072432.t1 | AT2G38810 | 62.617 | 107 | 38 | 2 | 18 | 123 | 27 | 132 | 1.15e-38 | 127 |
MS.gene072432.t1 | AT2G38810 | 62.617 | 107 | 38 | 2 | 18 | 123 | 27 | 132 | 1.15e-38 | 127 |
MS.gene072432.t1 | AT2G38810 | 62.617 | 107 | 38 | 2 | 18 | 123 | 27 | 132 | 1.15e-38 | 127 |
MS.gene072432.t1 | AT3G54560 | 60.952 | 105 | 39 | 2 | 20 | 123 | 29 | 132 | 4.84e-37 | 123 |
MS.gene072432.t1 | AT3G54560 | 60.952 | 105 | 39 | 2 | 20 | 123 | 29 | 132 | 4.84e-37 | 123 |
MS.gene072432.t1 | AT4G13570 | 45.045 | 111 | 59 | 2 | 8 | 117 | 9 | 118 | 2.09e-22 | 85.9 |
MS.gene072432.t1 | AT4G13570 | 49.451 | 91 | 44 | 2 | 28 | 117 | 35 | 124 | 8.80e-22 | 84.3 |
Find 51 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCCTTCCCAGCCTTCTT+TGG | 0.272919 | 7.3:-2901606 | None:intergenic |
TGAAGAACTCAGCAAGCTTT+TGG | 0.286717 | 7.3:+2901527 | MS.gene072432:CDS |
TGAAGATCTGGAAACTGATT+TGG | 0.302821 | 7.3:-2901203 | None:intergenic |
CAGCAAAGTCTGATGAATAT+TGG | 0.310312 | 7.3:-2901583 | None:intergenic |
GGGAAGGGAAAAGGCGAAAT+TGG | 0.311073 | 7.3:+2901618 | MS.gene072432:CDS |
AACACGTTCGGCGTATTTGC+CGG | 0.318153 | 7.3:-2901275 | None:intergenic |
AAGTCCGGCCTTTGAAGATC+TGG | 0.387108 | 7.3:-2901215 | None:intergenic |
AGCAAAGTCTGATGAATATT+GGG | 0.399419 | 7.3:-2901582 | None:intergenic |
GAAACTGATTTGGAAGCCTT+CGG | 0.412102 | 7.3:-2901193 | None:intergenic |
ACTTTGCTGCCAAAGAAGGC+TGG | 0.424753 | 7.3:+2901597 | MS.gene072432:CDS |
TCAGACTTTGCTGCCAAAGA+AGG | 0.433123 | 7.3:+2901593 | MS.gene072432:CDS |
AGCTCCGGCACCAACACGTT+CGG | 0.444935 | 7.3:-2901287 | None:intergenic |
AAGAAGGCTGGGAAGGGAAA+AGG | 0.471306 | 7.3:+2901609 | MS.gene072432:CDS |
GGAACTGTGACCATTGCTAA+TGG | 0.483635 | 7.3:+2901549 | MS.gene072432:CDS |
ACGTGTTGGTGCCGGAGCTC+CGG | 0.485122 | 7.3:+2901291 | MS.gene072432:CDS |
GGCACATTCAGCTTGCTGTC+AGG | 0.491110 | 7.3:+2901499 | MS.gene072432:CDS |
CGGCGTATTTGCCGGCCTTG+AGG | 0.502918 | 7.3:-2901267 | None:intergenic |
CTGGTACCACCAAGGGAGGA+AGG | 0.503740 | 7.3:+2901164 | MS.gene072432:CDS |
GGTACCACCAAGGGAGGAAG+GGG | 0.506354 | 7.3:+2901166 | MS.gene072432:CDS |
CTTTGCTGCCAAAGAAGGCT+GGG | 0.518155 | 7.3:+2901598 | MS.gene072432:CDS |
GTTTCCAGATCTTCAAAGGC+CGG | 0.518477 | 7.3:+2901211 | MS.gene072432:CDS |
TCCGACGGGGAATTGAAGTC+CGG | 0.524129 | 7.3:-2901230 | None:intergenic |
TACGCCGAACGTGTTGGTGC+CGG | 0.525825 | 7.3:+2901283 | MS.gene072432:CDS |
GCTGCCAAAGAAGGCTGGGA+AGG | 0.531759 | 7.3:+2901602 | MS.gene072432:CDS |
AATTGGCTGGGAACGCTGCA+AGG | 0.533557 | 7.3:+2901448 | MS.gene072432:CDS |
ATCGCAAGATTCCTCAAGGC+CGG | 0.538535 | 7.3:+2901256 | MS.gene072432:CDS |
TGGTACCACCAAGGGAGGAA+GGG | 0.539265 | 7.3:+2901165 | MS.gene072432:CDS |
ATCAGTTTCCAGATCTTCAA+AGG | 0.543380 | 7.3:+2901207 | MS.gene072432:CDS |
AGAGAGGTATACCGGAGCTC+CGG | 0.548996 | 7.3:-2901302 | None:intergenic |
AGGACCGCAGAGAGGTATAC+CGG | 0.559095 | 7.3:-2901310 | None:intergenic |
AATCTTGCGATTCTTCCGAC+GGG | 0.559881 | 7.3:-2901244 | None:intergenic |
ATTGGCTGGGAACGCTGCAA+GGG | 0.562499 | 7.3:+2901449 | MS.gene072432:CDS |
GATTCTGCTGGTACCACCAA+GGG | 0.568843 | 7.3:+2901157 | MS.gene072432:CDS |
GAATCTTGCGATTCTTCCGA+CGG | 0.569168 | 7.3:-2901245 | None:intergenic |
GAATGTGCCTTGGTACAATA+CGG | 0.571461 | 7.3:-2901485 | None:intergenic |
CTGCCAAAGAAGGCTGGGAA+GGG | 0.583937 | 7.3:+2901603 | MS.gene072432:CDS |
GGCAAATACGCCGAACGTGT+TGG | 0.584120 | 7.3:+2901277 | MS.gene072432:CDS |
ACAGCAAGCTGAATGTGCCT+TGG | 0.605047 | 7.3:-2901495 | None:intergenic |
GGGAGGAAGGGGAAAACCGA+AGG | 0.611626 | 7.3:+2901177 | MS.gene072432:CDS |
AAGAATCGCAAGATTCCTCA+AGG | 0.619754 | 7.3:+2901252 | MS.gene072432:CDS |
CCTTGAGTATCTCGCTGCTG+AGG | 0.632170 | 7.3:+2901330 | MS.gene072432:CDS |
CCTCAGCAGCGAGATACTCA+AGG | 0.638807 | 7.3:-2901330 | None:intergenic |
TCTGCTGGTACCACCAAGGG+AGG | 0.639099 | 7.3:+2901160 | MS.gene072432:CDS |
CAGAACACCACCATTAGCAA+TGG | 0.646082 | 7.3:-2901559 | None:intergenic |
GCCGGACTTCAATTCCCCGT+CGG | 0.658042 | 7.3:+2901229 | MS.gene072432:CDS |
GGATTCTGCTGGTACCACCA+AGG | 0.659312 | 7.3:+2901156 | MS.gene072432:CDS |
AGAAGAACCGTATTGTACCA+AGG | 0.686303 | 7.3:+2901478 | MS.gene072432:CDS |
ACTGTGACCATTGCTAATGG+TGG | 0.694716 | 7.3:+2901552 | MS.gene072432:CDS |
ATCTTGCGATTCTTCCGACG+GGG | 0.695192 | 7.3:-2901243 | None:intergenic |
GATACTCAAGGACCGCAGAG+AGG | 0.712819 | 7.3:-2901318 | None:intergenic |
AGCTCCGGTATACCTCTCTG+CGG | 0.763589 | 7.3:+2901306 | MS.gene072432:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAAACTGTATTTTAATTT+TGG | + | chr7.3:2901410-2901429 | MS.gene072432:intron | 10.0% |
!!! | TTAAACTGTATTTTAATTTT+GGG | + | chr7.3:2901411-2901430 | MS.gene072432:intron | 10.0% |
!! | AAAATACAGTTTAATCAAAT+TGG | - | chr7.3:2901405-2901424 | None:intergenic | 15.0% |
!!! | TATTTTAATTTTGGGTATTT+AGG | + | chr7.3:2901419-2901438 | MS.gene072432:intron | 15.0% |
! | ATACAAAAAAGAGAGTGAAA+GGG | - | chr7.3:2901377-2901396 | None:intergenic | 25.0% |
! | TATACAAAAAAGAGAGTGAA+AGG | - | chr7.3:2901378-2901397 | None:intergenic | 25.0% |
!!! | AATTTTGGGTATTTAGGTTT+TGG | + | chr7.3:2901425-2901444 | MS.gene072432:intron | 25.0% |
AGCAAAGTCTGATGAATATT+GGG | - | chr7.3:2901585-2901604 | None:intergenic | 30.0% | |
ATCAGTTTCCAGATCTTCAA+AGG | + | chr7.3:2901207-2901226 | MS.gene072432:CDS | 35.0% | |
CAGCAAAGTCTGATGAATAT+TGG | - | chr7.3:2901586-2901605 | None:intergenic | 35.0% | |
TGAAGATCTGGAAACTGATT+TGG | - | chr7.3:2901206-2901225 | None:intergenic | 35.0% | |
!!! | ATTTAGGTTTTGGAATTGGC+TGG | + | chr7.3:2901435-2901454 | MS.gene072432:intron | 35.0% |
!!! | GGGTATTTAGGTTTTGGAAT+TGG | + | chr7.3:2901431-2901450 | MS.gene072432:intron | 35.0% |
!!! | TTTAGGTTTTGGAATTGGCT+GGG | + | chr7.3:2901436-2901455 | MS.gene072432:intron | 35.0% |
AAGAATCGCAAGATTCCTCA+AGG | + | chr7.3:2901252-2901271 | MS.gene072432:CDS | 40.0% | |
AGAAGAACCGTATTGTACCA+AGG | + | chr7.3:2901478-2901497 | MS.gene072432:CDS | 40.0% | |
GAATGTGCCTTGGTACAATA+CGG | - | chr7.3:2901488-2901507 | None:intergenic | 40.0% | |
! | GAAGAACTCAGCAAGCTTTT+GGG | + | chr7.3:2901528-2901547 | MS.gene072432:CDS | 40.0% |
! | TGAAGAACTCAGCAAGCTTT+TGG | + | chr7.3:2901527-2901546 | MS.gene072432:CDS | 40.0% |
!! | GAAACTGATTTGGAAGCCTT+CGG | - | chr7.3:2901196-2901215 | None:intergenic | 40.0% |
AATCTTGCGATTCTTCCGAC+GGG | - | chr7.3:2901247-2901266 | None:intergenic | 45.0% | |
ACTGTGACCATTGCTAATGG+TGG | + | chr7.3:2901552-2901571 | MS.gene072432:CDS | 45.0% | |
CAGAACACCACCATTAGCAA+TGG | - | chr7.3:2901562-2901581 | None:intergenic | 45.0% | |
GAATCTTGCGATTCTTCCGA+CGG | - | chr7.3:2901248-2901267 | None:intergenic | 45.0% | |
GGAACTGTGACCATTGCTAA+TGG | + | chr7.3:2901549-2901568 | MS.gene072432:CDS | 45.0% | |
GTTTCCAGATCTTCAAAGGC+CGG | + | chr7.3:2901211-2901230 | MS.gene072432:CDS | 45.0% | |
TCAGACTTTGCTGCCAAAGA+AGG | + | chr7.3:2901593-2901612 | MS.gene072432:CDS | 45.0% | |
AACACGTTCGGCGTATTTGC+CGG | - | chr7.3:2901278-2901297 | None:intergenic | 50.0% | |
AAGAAGGCTGGGAAGGGAAA+AGG | + | chr7.3:2901609-2901628 | MS.gene072432:CDS | 50.0% | |
ACAGCAAGCTGAATGTGCCT+TGG | - | chr7.3:2901498-2901517 | None:intergenic | 50.0% | |
ACTTTGCTGCCAAAGAAGGC+TGG | + | chr7.3:2901597-2901616 | MS.gene072432:CDS | 50.0% | |
ATCGCAAGATTCCTCAAGGC+CGG | + | chr7.3:2901256-2901275 | MS.gene072432:CDS | 50.0% | |
ATCTTGCGATTCTTCCGACG+GGG | - | chr7.3:2901246-2901265 | None:intergenic | 50.0% | |
CTTTGCTGCCAAAGAAGGCT+GGG | + | chr7.3:2901598-2901617 | MS.gene072432:CDS | 50.0% | |
GATTCTGCTGGTACCACCAA+GGG | + | chr7.3:2901157-2901176 | MS.gene072432:CDS | 50.0% | |
GGGAAGGGAAAAGGCGAAAT+TGG | + | chr7.3:2901618-2901637 | MS.gene072432:CDS | 50.0% | |
TTTCCCTTCCCAGCCTTCTT+TGG | - | chr7.3:2901609-2901628 | None:intergenic | 50.0% | |
! | AAGTCCGGCCTTTGAAGATC+TGG | - | chr7.3:2901218-2901237 | None:intergenic | 50.0% |
AATTGGCTGGGAACGCTGCA+AGG | + | chr7.3:2901448-2901467 | MS.gene072432:CDS | 55.0% | |
AGCTCCGGTATACCTCTCTG+CGG | + | chr7.3:2901306-2901325 | MS.gene072432:CDS | 55.0% | |
ATTGGCTGGGAACGCTGCAA+GGG | + | chr7.3:2901449-2901468 | MS.gene072432:CDS | 55.0% | |
CCTCAGCAGCGAGATACTCA+AGG | - | chr7.3:2901333-2901352 | None:intergenic | 55.0% | |
CCTTGAGTATCTCGCTGCTG+AGG | + | chr7.3:2901330-2901349 | MS.gene072432:CDS | 55.0% | |
CTGCCAAAGAAGGCTGGGAA+GGG | + | chr7.3:2901603-2901622 | MS.gene072432:CDS | 55.0% | |
GATACTCAAGGACCGCAGAG+AGG | - | chr7.3:2901321-2901340 | None:intergenic | 55.0% | |
GGATTCTGCTGGTACCACCA+AGG | + | chr7.3:2901156-2901175 | MS.gene072432:CDS | 55.0% | |
GGCAAATACGCCGAACGTGT+TGG | + | chr7.3:2901277-2901296 | MS.gene072432:CDS | 55.0% | |
TCCGACGGGGAATTGAAGTC+CGG | - | chr7.3:2901233-2901252 | None:intergenic | 55.0% | |
TGGTACCACCAAGGGAGGAA+GGG | + | chr7.3:2901165-2901184 | MS.gene072432:CDS | 55.0% | |
! | AGAGAGGTATACCGGAGCTC+CGG | - | chr7.3:2901305-2901324 | None:intergenic | 55.0% |
! | AGGACCGCAGAGAGGTATAC+CGG | - | chr7.3:2901313-2901332 | None:intergenic | 55.0% |
! | TTTTCCCCTTCCTCCCTTGG+TGG | - | chr7.3:2901173-2901192 | None:intergenic | 55.0% |
!! | GGCACATTCAGCTTGCTGTC+AGG | + | chr7.3:2901499-2901518 | MS.gene072432:CDS | 55.0% |
AGCTCCGGCACCAACACGTT+CGG | - | chr7.3:2901290-2901309 | None:intergenic | 60.0% | |
CTGGTACCACCAAGGGAGGA+AGG | + | chr7.3:2901164-2901183 | MS.gene072432:CDS | 60.0% | |
GCCGGACTTCAATTCCCCGT+CGG | + | chr7.3:2901229-2901248 | MS.gene072432:CDS | 60.0% | |
GCTGCCAAAGAAGGCTGGGA+AGG | + | chr7.3:2901602-2901621 | MS.gene072432:CDS | 60.0% | |
GGGAGGAAGGGGAAAACCGA+AGG | + | chr7.3:2901177-2901196 | MS.gene072432:CDS | 60.0% | |
GGTACCACCAAGGGAGGAAG+GGG | + | chr7.3:2901166-2901185 | MS.gene072432:CDS | 60.0% | |
TCTGCTGGTACCACCAAGGG+AGG | + | chr7.3:2901160-2901179 | MS.gene072432:CDS | 60.0% | |
! | CGGTTTTCCCCTTCCTCCCT+TGG | - | chr7.3:2901176-2901195 | None:intergenic | 60.0% |
! | TACGCCGAACGTGTTGGTGC+CGG | + | chr7.3:2901283-2901302 | MS.gene072432:CDS | 60.0% |
CGGCGTATTTGCCGGCCTTG+AGG | - | chr7.3:2901270-2901289 | None:intergenic | 65.0% | |
!! | ACGTGTTGGTGCCGGAGCTC+CGG | + | chr7.3:2901291-2901310 | MS.gene072432:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 2901154 | 2901662 | 2901154 | ID=MS.gene072432 |
chr7.3 | mRNA | 2901154 | 2901662 | 2901154 | ID=MS.gene072432.t1;Parent=MS.gene072432 |
chr7.3 | exon | 2901154 | 2901351 | 2901154 | ID=MS.gene072432.t1.exon1;Parent=MS.gene072432.t1 |
chr7.3 | CDS | 2901154 | 2901351 | 2901154 | ID=cds.MS.gene072432.t1;Parent=MS.gene072432.t1 |
chr7.3 | exon | 2901441 | 2901662 | 2901441 | ID=MS.gene072432.t1.exon2;Parent=MS.gene072432.t1 |
chr7.3 | CDS | 2901441 | 2901662 | 2901441 | ID=cds.MS.gene072432.t1;Parent=MS.gene072432.t1 |
Gene Sequence |
Protein sequence |