AlfalfaGEDB | MS.gene29299

M. sativa cultivar XinJiangDaYe / MS.gene29299

KEGG: K11251
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0032991 GO:0032993 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:0110165 GO:1901363
PFAM: PF00125.27 PF16211.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29299.t1	RHN49328.1	97.1	139	4	0	1	139	57	195	2.40E-65	258.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29299.t1	O65759	95.7	139	6	0	1	139	1	139	1.4e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29299.t1	A2Q3H4	97.1	139	4	0	1	139	1	139	1.7e-65	258.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene29299	MS.gene67108	PPI
MS.gene29299	MS.gene64164	PPI
MS.gene92245	MS.gene29299	PPI
MS.gene24295	MS.gene29299	PPI
MS.gene29299	MS.gene52173	PPI
MS.gene015760	MS.gene29299	PPI
MS.gene057206	MS.gene29299	PPI
MS.gene29299	MS.gene26406	PPI
MS.gene29299	MS.gene033017	PPI
MS.gene037324	MS.gene29299	PPI
MS.gene29299	MS.gene70990	PPI
MS.gene58285	MS.gene29299	PPI
MS.gene29299	MS.gene81051	PPI
MS.gene07616	MS.gene29299	PPI
MS.gene24383	MS.gene29299	PPI
MS.gene29299	MS.gene027909	PPI
MS.gene29299	MS.gene70261	PPI
MS.gene46640	MS.gene29299	PPI
MS.gene29299	MS.gene018762	PPI
MS.gene038612	MS.gene29299	PPI
MS.gene027907	MS.gene29299	PPI
MS.gene78322	MS.gene29299	PPI
MS.gene028153	MS.gene29299	PPI
MS.gene29299	MS.gene28438	PPI
MS.gene99744	MS.gene29299	PPI
MS.gene29299	MS.gene030664	PPI
MS.gene29299	MS.gene27326	PPI
MS.gene28304	MS.gene29299	PPI
MS.gene29299	MS.gene034846	PPI
MS.gene58116	MS.gene29299	PPI
MS.gene030661	MS.gene29299	PPI
MS.gene02591	MS.gene29299	PPI
MS.gene87262	MS.gene29299	PPI
MS.gene029242	MS.gene29299	PPI
MS.gene023799	MS.gene29299	PPI
MS.gene062778	MS.gene29299	PPI
MS.gene42236	MS.gene29299	PPI
MS.gene28432	MS.gene29299	PPI
MS.gene033382	MS.gene29299	PPI
MS.gene29299	MS.gene05905	PPI
MS.gene92710	MS.gene29299	PPI
MS.gene29299	MS.gene045235	PPI
MS.gene068179	MS.gene29299	PPI
MS.gene29299	MS.gene78324	PPI
MS.gene97703	MS.gene29299	PPI
MS.gene29299	MS.gene72768	PPI
MS.gene72993	MS.gene29299	PPI
MS.gene68979	MS.gene29299	PPI
MS.gene91631	MS.gene29299	PPI
MS.gene050290	MS.gene29299	PPI
MS.gene29299	MS.gene017431	PPI
MS.gene29299	MS.gene70258	PPI
MS.gene29299	MS.gene035097	PPI
MS.gene021887	MS.gene29299	PPI
MS.gene009155	MS.gene29299	PPI
MS.gene29299	MS.gene003846	PPI
MS.gene78924	MS.gene29299	PPI
MS.gene29299	MS.gene038800	PPI
MS.gene020313	MS.gene29299	PPI
MS.gene29299	MS.gene051008	PPI
MS.gene29299	MS.gene056335	PPI
MS.gene29299	MS.gene58112	PPI
MS.gene75575	MS.gene29299	PPI
MS.gene29299	MS.gene29300	PPI
MS.gene78323	MS.gene29299	PPI
MS.gene29299	MS.gene045065	PPI
MS.gene29299	MS.gene41916	PPI
MS.gene013822	MS.gene29299	PPI
MS.gene29299	MS.gene072432	PPI
MS.gene013534	MS.gene29299	PPI
MS.gene39538	MS.gene29299	PPI
MS.gene066535	MS.gene29299	PPI
MS.gene78922	MS.gene29299	PPI
MS.gene29299	MS.gene89203	PPI
MS.gene071851	MS.gene29299	PPI
MS.gene29299	MS.gene60922	PPI
MS.gene28434	MS.gene29299	PPI
MS.gene77911	MS.gene29299	PPI
MS.gene29299	MS.gene47573	PPI
MS.gene29299	MS.gene001986	PPI
MS.gene066537	MS.gene29299	PPI
MS.gene97701	MS.gene29299	PPI
MS.gene78112	MS.gene29299	PPI
MS.gene057458	MS.gene29299	PPI
MS.gene29299	MS.gene056896	PPI
MS.gene24706	MS.gene29299	PPI
MS.gene29299	MS.gene28303	PPI
MS.gene067033	MS.gene29299	PPI
MS.gene27648	MS.gene29299	PPI
MS.gene059054	MS.gene29299	PPI
MS.gene29299	MS.gene044021	PPI
MS.gene29299	MS.gene26084	PPI
MS.gene056257	MS.gene29299	PPI
MS.gene29299	MS.gene78227	PPI
MS.gene068178	MS.gene29299	PPI
MS.gene29299	MS.gene82426	PPI
MS.gene29299	MS.gene06859	PPI
MS.gene29299	MS.gene65125	PPI
MS.gene32514	MS.gene29299	PPI
MS.gene29299	MS.gene23886	PPI
MS.gene29299	MS.gene050252	PPI
MS.gene29299	MS.gene011421	PPI
MS.gene045232	MS.gene29299	PPI
MS.gene04820	MS.gene29299	PPI
MS.gene072433	MS.gene29299	PPI
MS.gene29299	MS.gene054186	PPI
MS.gene29299	MS.gene08465	PPI
MS.gene017174	MS.gene29299	PPI
MS.gene030666	MS.gene29299	PPI
MS.gene29299	MS.gene78224	PPI
MS.gene065496	MS.gene29299	PPI
MS.gene045233	MS.gene29299	PPI
MS.gene29299	MS.gene056617	PPI
MS.gene059422	MS.gene29299	PPI
MS.gene29299	MS.gene044498	PPI
MS.gene29299	MS.gene29298	PPI
MS.gene049111	MS.gene29299	PPI
MS.gene29299	MS.gene038409	PPI
MS.gene027904	MS.gene29299	PPI
MS.gene75426	MS.gene29299	PPI
MS.gene29299	MS.gene45448	PPI
MS.gene29299	MS.gene81765	PPI
MS.gene00233	MS.gene29299	PPI
MS.gene70263	MS.gene29299	PPI
MS.gene29521	MS.gene29299	PPI
MS.gene29299	MS.gene46303	PPI
MS.gene03801	MS.gene29299	PPI
MS.gene06645	MS.gene29299	PPI
MS.gene62799	MS.gene29299	PPI
MS.gene29299	MS.gene066536	PPI
MS.gene29299	MS.gene072431	PPI
MS.gene29299	MS.gene83444	PPI
MS.gene66051	MS.gene29299	PPI
MS.gene79130	MS.gene29299	PPI
MS.gene29299	MS.gene78323	PPI
MS.gene29299	MS.gene58114	PPI
MS.gene062301	MS.gene29299	PPI
MS.gene29299	MS.gene04748	PPI
MS.gene29299	MS.gene50129	PPI
MS.gene29299	MS.gene044591	PPI
MS.gene031283	MS.gene29299	PPI
MS.gene26950	MS.gene29299	PPI
MS.gene95527	MS.gene29299	PPI
MS.gene29445	MS.gene29299	PPI
MS.gene29299	MS.gene32513	PPI
MS.gene007189	MS.gene29299	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29299.t1	MTR_7g114060	97.122	139	4	0	1	139	1	139	1.04e-94	269
MS.gene29299.t1	MTR_7g114040	97.122	139	4	0	1	139	1	139	1.04e-94	269
MS.gene29299.t1	MTR_7g108320	95.070	142	4	1	1	139	1	142	3.24e-92	263
MS.gene29299.t1	MTR_7g093910	85.401	137	20	0	3	139	6	142	4.01e-82	238
MS.gene29299.t1	MTR_7g114050	87.023	131	6	2	9	139	11	130	9.58e-73	213
MS.gene29299.t1	MTR_2g082510	87.603	121	11	1	10	126	3	123	6.39e-70	206
MS.gene29299.t1	MTR_2g082220	86.290	124	13	1	10	129	3	126	7.87e-70	206
MS.gene29299.t1	MTR_2g096610	75.000	120	30	0	18	137	21	140	7.95e-60	181
MS.gene29299.t1	MTR_7g113160	76.033	121	25	1	4	124	15	131	3.14e-59	180
MS.gene29299.t1	MTR_4g063280	72.441	127	34	1	1	127	1	126	2.43e-58	177
MS.gene29299.t1	MTR_8g086640	79.817	109	22	0	19	127	24	132	2.79e-58	177
MS.gene29299.t1	MTR_4g064005	79.817	109	22	0	19	127	24	132	4.57e-58	177
MS.gene29299.t1	MTR_2g096570	81.132	106	20	0	19	124	23	128	4.86e-58	177
MS.gene29299.t1	MTR_4g071150	81.132	106	20	0	19	124	24	129	6.90e-58	177
MS.gene29299.t1	MTR_4g064967	81.132	106	20	0	19	124	24	129	9.83e-58	176
MS.gene29299.t1	MTR_4g063410	80.189	106	21	0	19	124	24	129	1.90e-57	176
MS.gene29299.t1	MTR_6g005150	61.345	119	37	2	19	136	26	136	3.71e-42	136
MS.gene29299.t1	MTR_1g011750	63.551	107	37	2	18	123	25	130	1.59e-39	129
MS.gene29299.t1	MTR_1g011850	63.551	107	37	2	18	123	25	130	1.59e-39	129
MS.gene29299.t1	MTR_1g114050	62.617	107	38	2	20	125	24	129	1.90e-38	127
MS.gene29299.t1	MTR_1g071040	63.208	106	37	2	21	125	28	132	3.90e-38	126
MS.gene29299.t1	MTR_4g063300	79.730	74	15	0	40	113	10	83	9.89e-36	119
MS.gene29299.t1	MTR_4g005910	91.111	45	4	0	82	126	4	48	1.24e-23	87.0
MS.gene29299.t1	MTR_7g010440	69.697	66	20	0	73	138	122	187	5.68e-23	91.7
MS.gene29299.t1	MTR_4g048490	45.714	105	28	2	19	123	26	101	6.65e-20	79.0
MS.gene29299.t1	MTR_1g069770	55.224	67	30	0	62	128	32	98	6.85e-19	76.6
MS.gene29299.t1	MTR_7g027610	40.323	124	39	4	6	125	4	96	2.25e-16	70.1
MS.gene29299.t1	MTR_0653s0030	40.000	100	35	2	3	102	21	95	1.95e-12	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29299.t1	AT1G54690	94.118	136	8	0	4	139	7	142	9.16e-90	257
MS.gene29299.t1	AT1G08880	93.382	136	9	0	4	139	7	142	2.28e-89	256
MS.gene29299.t1	AT4G27230	87.097	124	12	1	10	129	3	126	9.93e-71	208
MS.gene29299.t1	AT4G27230	87.097	124	12	1	10	129	3	126	9.93e-71	208
MS.gene29299.t1	AT5G54640	86.290	124	13	1	10	129	3	126	9.30e-70	206
MS.gene29299.t1	AT3G20670	85.484	124	14	1	10	129	3	126	1.04e-68	203
MS.gene29299.t1	AT1G51060	83.871	124	16	1	10	129	3	126	1.49e-68	203
MS.gene29299.t1	AT5G59870	72.308	130	31	2	1	125	1	130	1.56e-60	183
MS.gene29299.t1	AT5G27670	70.588	136	34	2	4	137	14	145	1.16e-57	176
MS.gene29299.t1	AT5G02560	78.182	110	24	0	18	127	23	132	1.81e-57	176
MS.gene29299.t1	AT5G02560	64.179	134	24	1	18	127	23	156	4.48e-52	163
MS.gene29299.t1	AT1G52740	57.377	122	43	3	12	125	12	132	6.98e-39	128
MS.gene29299.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.15e-38	127
MS.gene29299.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.15e-38	127
MS.gene29299.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.15e-38	127
MS.gene29299.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.15e-38	127
MS.gene29299.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.84e-37	123
MS.gene29299.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.84e-37	123
MS.gene29299.t1	AT4G13570	45.045	111	59	2	8	117	9	118	2.09e-22	85.9
MS.gene29299.t1	AT4G13570	49.451	91	44	2	28	117	35	124	8.80e-22	84.3

Find 51 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCCTTCCCAGCCTTCTT+TGG	0.272919	7.2:-3356036	None:intergenic
TGAAGAACTCAGCAAGCTTT+TGG	0.286717	7.2:+3355957	MS.gene29299:CDS
TGAAGATCTGGAAACTGATT+TGG	0.302821	7.2:-3355633	None:intergenic
CAGCAAAGTCTGATGAATAT+TGG	0.310312	7.2:-3356013	None:intergenic
GGGAAGGGAAAAGGCGAAAT+TGG	0.311073	7.2:+3356048	MS.gene29299:CDS
AACACGTTCGGCGTATTTGC+CGG	0.318153	7.2:-3355705	None:intergenic
AAGTCCGGCCTTTGAAGATC+TGG	0.387108	7.2:-3355645	None:intergenic
AGCAAAGTCTGATGAATATT+GGG	0.399419	7.2:-3356012	None:intergenic
GAAACTGATTTGGAAGCCTT+CGG	0.412102	7.2:-3355623	None:intergenic
ACTTTGCTGCCAAAGAAGGC+TGG	0.424753	7.2:+3356027	MS.gene29299:CDS
TCAGACTTTGCTGCCAAAGA+AGG	0.433123	7.2:+3356023	MS.gene29299:CDS
AGCTCCGGCACCAACACGTT+CGG	0.444935	7.2:-3355717	None:intergenic
AAGAAGGCTGGGAAGGGAAA+AGG	0.471306	7.2:+3356039	MS.gene29299:CDS
CTGGTACCACCAAGGGAGGA+AGG	0.482850	7.2:+3355594	MS.gene29299:CDS
GGAACTGTGACCATTGCTAA+TGG	0.483635	7.2:+3355979	MS.gene29299:CDS
ACGTGTTGGTGCCGGAGCTC+CGG	0.485122	7.2:+3355721	MS.gene29299:CDS
GGCACATTCAGCTTGCTGTC+AGG	0.491110	7.2:+3355929	MS.gene29299:CDS
CGGCGTATTTGCCGGCCTTG+AGG	0.502918	7.2:-3355697	None:intergenic
GGTACCACCAAGGGAGGAAG+GGG	0.504666	7.2:+3355596	MS.gene29299:CDS
CTTTGCTGCCAAAGAAGGCT+GGG	0.518155	7.2:+3356028	MS.gene29299:CDS
TGGTACCACCAAGGGAGGAA+GGG	0.518374	7.2:+3355595	MS.gene29299:CDS
GTTTCCAGATCTTCAAAGGC+CGG	0.518477	7.2:+3355641	MS.gene29299:CDS
TCCGACGGGGAATTGAAGTC+CGG	0.524129	7.2:-3355660	None:intergenic
TACGCCGAACGTGTTGGTGC+CGG	0.525825	7.2:+3355713	MS.gene29299:CDS
GCTGCCAAAGAAGGCTGGGA+AGG	0.531759	7.2:+3356032	MS.gene29299:CDS
AATTGGCTGGGAACGCTGCA+AGG	0.533557	7.2:+3355878	MS.gene29299:CDS
ATCGCAAGATTCCTCAAGGC+CGG	0.538535	7.2:+3355686	MS.gene29299:CDS
ATCAGTTTCCAGATCTTCAA+AGG	0.543380	7.2:+3355637	MS.gene29299:CDS
AGAGAGGTATACCGGAGCTC+CGG	0.548996	7.2:-3355732	None:intergenic
AGGACCGCAGAGAGGTATAC+CGG	0.559095	7.2:-3355740	None:intergenic
AATCTTGCGATTCTTCCGAC+GGG	0.559881	7.2:-3355674	None:intergenic
ATTGGCTGGGAACGCTGCAA+GGG	0.562499	7.2:+3355879	MS.gene29299:CDS
GATTCTGCTGGTACCACCAA+GGG	0.568843	7.2:+3355587	MS.gene29299:CDS
GAATCTTGCGATTCTTCCGA+CGG	0.569168	7.2:-3355675	None:intergenic
GAATGTGCCTTGGTACAATA+CGG	0.571461	7.2:-3355915	None:intergenic
CTGCCAAAGAAGGCTGGGAA+GGG	0.583937	7.2:+3356033	MS.gene29299:CDS
GGCAAATACGCCGAACGTGT+TGG	0.584120	7.2:+3355707	MS.gene29299:CDS
ACAGCAAGCTGAATGTGCCT+TGG	0.605047	7.2:-3355925	None:intergenic
AAGAATCGCAAGATTCCTCA+AGG	0.619754	7.2:+3355682	MS.gene29299:CDS
CCTTGAGTATCTCGCTGCTG+AGG	0.632170	7.2:+3355760	MS.gene29299:CDS
CCTCAGCAGCGAGATACTCA+AGG	0.638807	7.2:-3355760	None:intergenic
TCTGCTGGTACCACCAAGGG+AGG	0.639099	7.2:+3355590	MS.gene29299:CDS
CAGAACACCACCATTAGCAA+TGG	0.646082	7.2:-3355989	None:intergenic
GCCGGACTTCAATTCCCCGT+CGG	0.658042	7.2:+3355659	MS.gene29299:CDS
GGATTCTGCTGGTACCACCA+AGG	0.659312	7.2:+3355586	MS.gene29299:CDS
GTACCACCAAGGGAGGAAGG+GGG	0.685414	7.2:+3355597	MS.gene29299:CDS
AGAAGAACCGTATTGTACCA+AGG	0.686303	7.2:+3355908	MS.gene29299:CDS
ACTGTGACCATTGCTAATGG+TGG	0.694716	7.2:+3355982	MS.gene29299:CDS
ATCTTGCGATTCTTCCGACG+GGG	0.695192	7.2:-3355673	None:intergenic
GATACTCAAGGACCGCAGAG+AGG	0.712819	7.2:-3355748	None:intergenic
AGCTCCGGTATACCTCTCTG+CGG	0.763589	7.2:+3355736	MS.gene29299:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAAACTGTATTTTAATTT+TGG	+	chr7.2:3355840-3355859	MS.gene29299:intron	10.0%
!!!	TTAAACTGTATTTTAATTTT+GGG	+	chr7.2:3355841-3355860	MS.gene29299:intron	10.0%
!!	AAAATACAGTTTAATCAAAT+TGG	-	chr7.2:3355835-3355854	None:intergenic	15.0%
!!!	TATTTTAATTTTGGGTATTT+AGG	+	chr7.2:3355849-3355868	MS.gene29299:intron	15.0%
!	ATACAAAAAAGAGAGTGAAA+GGG	-	chr7.2:3355807-3355826	None:intergenic	25.0%
!	TATACAAAAAAGAGAGTGAA+AGG	-	chr7.2:3355808-3355827	None:intergenic	25.0%
!!!	AATTTTGGGTATTTAGGTTT+TGG	+	chr7.2:3355855-3355874	MS.gene29299:intron	25.0%
	AGCAAAGTCTGATGAATATT+GGG	-	chr7.2:3356015-3356034	None:intergenic	30.0%
	ATCAGTTTCCAGATCTTCAA+AGG	+	chr7.2:3355637-3355656	MS.gene29299:CDS	35.0%
	CAGCAAAGTCTGATGAATAT+TGG	-	chr7.2:3356016-3356035	None:intergenic	35.0%
	TGAAGATCTGGAAACTGATT+TGG	-	chr7.2:3355636-3355655	None:intergenic	35.0%
!!!	ATTTAGGTTTTGGAATTGGC+TGG	+	chr7.2:3355865-3355884	MS.gene29299:intron	35.0%
!!!	GGGTATTTAGGTTTTGGAAT+TGG	+	chr7.2:3355861-3355880	MS.gene29299:intron	35.0%
!!!	TTTAGGTTTTGGAATTGGCT+GGG	+	chr7.2:3355866-3355885	MS.gene29299:intron	35.0%
	AAGAATCGCAAGATTCCTCA+AGG	+	chr7.2:3355682-3355701	MS.gene29299:CDS	40.0%
	AGAAGAACCGTATTGTACCA+AGG	+	chr7.2:3355908-3355927	MS.gene29299:CDS	40.0%
	GAATGTGCCTTGGTACAATA+CGG	-	chr7.2:3355918-3355937	None:intergenic	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	+	chr7.2:3355958-3355977	MS.gene29299:CDS	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	+	chr7.2:3355957-3355976	MS.gene29299:CDS	40.0%
!!	GAAACTGATTTGGAAGCCTT+CGG	-	chr7.2:3355626-3355645	None:intergenic	40.0%
	AATCTTGCGATTCTTCCGAC+GGG	-	chr7.2:3355677-3355696	None:intergenic	45.0%
	ACTGTGACCATTGCTAATGG+TGG	+	chr7.2:3355982-3356001	MS.gene29299:CDS	45.0%
	CAGAACACCACCATTAGCAA+TGG	-	chr7.2:3355992-3356011	None:intergenic	45.0%
	GAATCTTGCGATTCTTCCGA+CGG	-	chr7.2:3355678-3355697	None:intergenic	45.0%
	GGAACTGTGACCATTGCTAA+TGG	+	chr7.2:3355979-3355998	MS.gene29299:CDS	45.0%
	GTTTCCAGATCTTCAAAGGC+CGG	+	chr7.2:3355641-3355660	MS.gene29299:CDS	45.0%
	TCAGACTTTGCTGCCAAAGA+AGG	+	chr7.2:3356023-3356042	MS.gene29299:CDS	45.0%
	AACACGTTCGGCGTATTTGC+CGG	-	chr7.2:3355708-3355727	None:intergenic	50.0%
	AAGAAGGCTGGGAAGGGAAA+AGG	+	chr7.2:3356039-3356058	MS.gene29299:CDS	50.0%
	ACAGCAAGCTGAATGTGCCT+TGG	-	chr7.2:3355928-3355947	None:intergenic	50.0%
	ACTTTGCTGCCAAAGAAGGC+TGG	+	chr7.2:3356027-3356046	MS.gene29299:CDS	50.0%
	ATCGCAAGATTCCTCAAGGC+CGG	+	chr7.2:3355686-3355705	MS.gene29299:CDS	50.0%
	ATCTTGCGATTCTTCCGACG+GGG	-	chr7.2:3355676-3355695	None:intergenic	50.0%
	CTTTGCTGCCAAAGAAGGCT+GGG	+	chr7.2:3356028-3356047	MS.gene29299:CDS	50.0%
	GATTCTGCTGGTACCACCAA+GGG	+	chr7.2:3355587-3355606	MS.gene29299:CDS	50.0%
	GGGAAGGGAAAAGGCGAAAT+TGG	+	chr7.2:3356048-3356067	MS.gene29299:CDS	50.0%
	TTTCCCTTCCCAGCCTTCTT+TGG	-	chr7.2:3356039-3356058	None:intergenic	50.0%
!	AAGTCCGGCCTTTGAAGATC+TGG	-	chr7.2:3355648-3355667	None:intergenic	50.0%
	AATTGGCTGGGAACGCTGCA+AGG	+	chr7.2:3355878-3355897	MS.gene29299:CDS	55.0%
	AGCTCCGGTATACCTCTCTG+CGG	+	chr7.2:3355736-3355755	MS.gene29299:CDS	55.0%
	ATTGGCTGGGAACGCTGCAA+GGG	+	chr7.2:3355879-3355898	MS.gene29299:CDS	55.0%
	CCTCAGCAGCGAGATACTCA+AGG	-	chr7.2:3355763-3355782	None:intergenic	55.0%
	CCTTGAGTATCTCGCTGCTG+AGG	+	chr7.2:3355760-3355779	MS.gene29299:CDS	55.0%
	CTGCCAAAGAAGGCTGGGAA+GGG	+	chr7.2:3356033-3356052	MS.gene29299:CDS	55.0%
	GATACTCAAGGACCGCAGAG+AGG	-	chr7.2:3355751-3355770	None:intergenic	55.0%
	GGATTCTGCTGGTACCACCA+AGG	+	chr7.2:3355586-3355605	MS.gene29299:CDS	55.0%
	GGCAAATACGCCGAACGTGT+TGG	+	chr7.2:3355707-3355726	MS.gene29299:CDS	55.0%
	TCCGACGGGGAATTGAAGTC+CGG	-	chr7.2:3355663-3355682	None:intergenic	55.0%
	TGGTACCACCAAGGGAGGAA+GGG	+	chr7.2:3355595-3355614	MS.gene29299:CDS	55.0%
!	AGAGAGGTATACCGGAGCTC+CGG	-	chr7.2:3355735-3355754	None:intergenic	55.0%
!	AGGACCGCAGAGAGGTATAC+CGG	-	chr7.2:3355743-3355762	None:intergenic	55.0%
!!	GGCACATTCAGCTTGCTGTC+AGG	+	chr7.2:3355929-3355948	MS.gene29299:CDS	55.0%
	AGCTCCGGCACCAACACGTT+CGG	-	chr7.2:3355720-3355739	None:intergenic	60.0%
	CTGGTACCACCAAGGGAGGA+AGG	+	chr7.2:3355594-3355613	MS.gene29299:CDS	60.0%
	GCCGGACTTCAATTCCCCGT+CGG	+	chr7.2:3355659-3355678	MS.gene29299:CDS	60.0%
	GCTGCCAAAGAAGGCTGGGA+AGG	+	chr7.2:3356032-3356051	MS.gene29299:CDS	60.0%
	GGTACCACCAAGGGAGGAAG+GGG	+	chr7.2:3355596-3355615	MS.gene29299:CDS	60.0%
	GTACCACCAAGGGAGGAAGG+GGG	+	chr7.2:3355597-3355616	MS.gene29299:CDS	60.0%
	TCTGCTGGTACCACCAAGGG+AGG	+	chr7.2:3355590-3355609	MS.gene29299:CDS	60.0%
	TTTCCCCCTTCCTCCCTTGG+TGG	-	chr7.2:3355603-3355622	None:intergenic	60.0%
!	TACGCCGAACGTGTTGGTGC+CGG	+	chr7.2:3355713-3355732	MS.gene29299:CDS	60.0%
	CGGCGTATTTGCCGGCCTTG+AGG	-	chr7.2:3355700-3355719	None:intergenic	65.0%
	CGGTTTCCCCCTTCCTCCCT+TGG	-	chr7.2:3355606-3355625	None:intergenic	65.0%
	GGGAGGAAGGGGGAAACCGA+AGG	+	chr7.2:3355607-3355626	MS.gene29299:CDS	65.0%
!!	ACGTGTTGGTGCCGGAGCTC+CGG	+	chr7.2:3355721-3355740	MS.gene29299:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	3355584	3356092	3355584	ID=MS.gene29299
chr7.2	mRNA	3355584	3356092	3355584	ID=MS.gene29299.t1;Parent=MS.gene29299
chr7.2	exon	3355584	3355781	3355584	ID=MS.gene29299.t1.exon1;Parent=MS.gene29299.t1
chr7.2	CDS	3355584	3355781	3355584	ID=cds.MS.gene29299.t1;Parent=MS.gene29299.t1
chr7.2	exon	3355871	3356092	3355871	ID=MS.gene29299.t1.exon2;Parent=MS.gene29299.t1
chr7.2	CDS	3355871	3356092	3355871	ID=cds.MS.gene29299.t1;Parent=MS.gene29299.t1

Gene Sequence

>MS.gene29299

ATGGATTCTGCTGGTACCACCAAGGGAGGAAGGGGGAAACCGAAGGCTTCCAAATCAGTTTCCAGATCTTCAAAGGCCGGACTTCAATTCCCCGTCGGAAGAATCGCAAGATTCCTCAAGGCCGGCAAATACGCCGAACGTGTTGGTGCCGGAGCTCCGGTATACCTCTCTGCGGTCCTTGAGTATCTCGCTGCTGAGGTTCGTTTCTTTTCTTCAATTTCCCTTTCACTCTCTTTTTTGTATAATATCCAATTTGATTAAACTGTATTTTAATTTTGGGTATTTAGGTTTTGGAATTGGCTGGGAACGCTGCAAGGGACAACAAGAAGAACCGTATTGTACCAAGGCACATTCAGCTTGCTGTCAGGAACGATGAAGAACTCAGCAAGCTTTTGGGAACTGTGACCATTGCTAATGGTGGTGTTCTGCCCAATATTCATCAGACTTTGCTGCCAAAGAAGGCTGGGAAGGGAAAAGGCGAAATTGGATCTGCTTCTCAAGAATTTTAG

Protein sequence

>MS.gene29299.t1

MDSAGTTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKAGKGKGEIGSASQEF