AlfalfaGEDB | MS.gene78322

M. sativa cultivar XinJiangDaYe / MS.gene78322

KEGG: K11251
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0032991 GO:0032993 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:0110165 GO:1901363
PFAM: PF00125.27 PF16211.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78322.t1	RHN49328.1	100	139	0	0	1	139	57	195	4.40E-67	263.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78322.t1	O65759	97.1	139	4	0	1	139	1	139	1.3e-67	256.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78322.t1	A2Q3H4	100.0	139	0	0	1	139	1	139	3.1e-67	263.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene78322	MS.gene059054	PPI
MS.gene78322	MS.gene056896	PPI
MS.gene78322	MS.gene28303	PPI
MS.gene78322	MS.gene78324	PPI
MS.gene78322	MS.gene072433	PPI
MS.gene66051	MS.gene78322	PPI
MS.gene79130	MS.gene78322	PPI
MS.gene78322	MS.gene044021	PPI
MS.gene78322	MS.gene26084	PPI
MS.gene78322	MS.gene78227	PPI
MS.gene78322	MS.gene70258	PPI
MS.gene78322	MS.gene82426	PPI
MS.gene78322	MS.gene06859	PPI
MS.gene78322	MS.gene65125	PPI
MS.gene78322	MS.gene044498	PPI
MS.gene78322	MS.gene050290	PPI
MS.gene78322	MS.gene23886	PPI
MS.gene78322	MS.gene028153	PPI
MS.gene78322	MS.gene050252	PPI
MS.gene78322	MS.gene011421	PPI
MS.gene007189	MS.gene78322	PPI
MS.gene78322	MS.gene29299	PPI
MS.gene78322	MS.gene015760	PPI
MS.gene78322	MS.gene054186	PPI
MS.gene78322	MS.gene08465	PPI
MS.gene78322	MS.gene066535	PPI
MS.gene057206	MS.gene78322	PPI
MS.gene78322	MS.gene056257	PPI
MS.gene78322	MS.gene29445	PPI
MS.gene78322	MS.gene78224	PPI
MS.gene78322	MS.gene038612	PPI
MS.gene037324	MS.gene78322	PPI
MS.gene24383	MS.gene78322	PPI
MS.gene78322	MS.gene056617	PPI
MS.gene46640	MS.gene78322	PPI
MS.gene78322	MS.gene29298	PPI
MS.gene78322	MS.gene030661	PPI
MS.gene78322	MS.gene038409	PPI
MS.gene027907	MS.gene78322	PPI
MS.gene78322	MS.gene45448	PPI
MS.gene78322	MS.gene81765	PPI
MS.gene78322	MS.gene46303	PPI
MS.gene78322	MS.gene72993	PPI
MS.gene58285	MS.gene78322	PPI
MS.gene78322	MS.gene28438	PPI
MS.gene58116	MS.gene78322	PPI
MS.gene78322	MS.gene92245	PPI
MS.gene78322	MS.gene066536	PPI
MS.gene78322	MS.gene75575	PPI
MS.gene87262	MS.gene78322	PPI
MS.gene062778	MS.gene78322	PPI
MS.gene78322	MS.gene072431	PPI
MS.gene42236	MS.gene78322	PPI
MS.gene28432	MS.gene78322	PPI
MS.gene78322	MS.gene83444	PPI
MS.gene92710	MS.gene78322	PPI
MS.gene78322	MS.gene033382	PPI
MS.gene78322	MS.gene91631	PPI
MS.gene78322	MS.gene04748	PPI
MS.gene78322	MS.gene50129	PPI
MS.gene78322	MS.gene044591	PPI
MS.gene68979	MS.gene78322	PPI
MS.gene78924	MS.gene78322	PPI
MS.gene020313	MS.gene78322	PPI
MS.gene78322	MS.gene32513	PPI
MS.gene07616	MS.gene78322	PPI
MS.gene78322	MS.gene67108	PPI
MS.gene78322	MS.gene24295	PPI
MS.gene013822	MS.gene78322	PPI
MS.gene78322	MS.gene64164	PPI
MS.gene78322	MS.gene26950	PPI
MS.gene78322	MS.gene52173	PPI
MS.gene39538	MS.gene78322	PPI
MS.gene78322	MS.gene031283	PPI
MS.gene78922	MS.gene78322	PPI
MS.gene071851	MS.gene78322	PPI
MS.gene78322	MS.gene26406	PPI
MS.gene78322	MS.gene033017	PPI
MS.gene78322	MS.gene70990	PPI
MS.gene28434	MS.gene78322	PPI
MS.gene78322	MS.gene81051	PPI
MS.gene78322	MS.gene068179	PPI
MS.gene78322	MS.gene62799	PPI
MS.gene78322	MS.gene027909	PPI
MS.gene77911	MS.gene78322	PPI
MS.gene78322	MS.gene70261	PPI
MS.gene78322	MS.gene009155	PPI
MS.gene78322	MS.gene067033	PPI
MS.gene78322	MS.gene06645	PPI
MS.gene78322	MS.gene018762	PPI
MS.gene78112	MS.gene78322	PPI
MS.gene78322	MS.gene97703	PPI
MS.gene24706	MS.gene78322	PPI
MS.gene78322	MS.gene78323	PPI
MS.gene78322	MS.gene58114	PPI
MS.gene78322	MS.gene065496	PPI
MS.gene78322	MS.gene030664	PPI
MS.gene27648	MS.gene78322	PPI
MS.gene78322	MS.gene27326	PPI
MS.gene78322	MS.gene034846	PPI
MS.gene78322	MS.gene99744	PPI
MS.gene021887	MS.gene78322	PPI
MS.gene78322	MS.gene05905	PPI
MS.gene78322	MS.gene045235	PPI
MS.gene32514	MS.gene78322	PPI
MS.gene78322	MS.gene062301	PPI
MS.gene78322	MS.gene023799	PPI
MS.gene78322	MS.gene029242	PPI
MS.gene013534	MS.gene78322	PPI
MS.gene78322	MS.gene72768	PPI
MS.gene045232	MS.gene78322	PPI
MS.gene78322	MS.gene057458	PPI
MS.gene78322	MS.gene29521	PPI
MS.gene04820	MS.gene78322	PPI
MS.gene78322	MS.gene017431	PPI
MS.gene072433	MS.gene78322	PPI
MS.gene78322	MS.gene035097	PPI
MS.gene78322	MS.gene07616	PPI
MS.gene78322	MS.gene066537	PPI
MS.gene78322	MS.gene003846	PPI
MS.gene78322	MS.gene038800	PPI
MS.gene017174	MS.gene78322	PPI
MS.gene78322	MS.gene051008	PPI
MS.gene78322	MS.gene056335	PPI
MS.gene78322	MS.gene58112	PPI
MS.gene78322	MS.gene29300	PPI
MS.gene78322	MS.gene045065	PPI
MS.gene030666	MS.gene78322	PPI
MS.gene78322	MS.gene41916	PPI
MS.gene78322	MS.gene072432	PPI
MS.gene78322	MS.gene045233	PPI
MS.gene97701	MS.gene78322	PPI
MS.gene78322	MS.gene28304	PPI
MS.gene78322	MS.gene89203	PPI
MS.gene059422	MS.gene78322	PPI
MS.gene78322	MS.gene02591	PPI
MS.gene78322	MS.gene95527	PPI
MS.gene78322	MS.gene60922	PPI
MS.gene78322	MS.gene00233	PPI
MS.gene049111	MS.gene78322	PPI
MS.gene75426	MS.gene78322	PPI
MS.gene70263	MS.gene78322	PPI
MS.gene78322	MS.gene068178	PPI
MS.gene03801	MS.gene78322	PPI
MS.gene78322	MS.gene47573	PPI
MS.gene78322	MS.gene001986	PPI
MS.gene78322	MS.gene027904	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78322.t1	MTR_7g114060	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene78322.t1	MTR_7g114040	100.000	139	0	0	1	139	1	139	3.00e-97	276
MS.gene78322.t1	MTR_7g108320	95.775	142	3	1	1	139	1	142	4.40e-93	265
MS.gene78322.t1	MTR_7g093910	87.313	134	17	0	6	139	9	142	6.22e-82	237
MS.gene78322.t1	MTR_7g114050	87.023	131	6	2	9	139	11	130	3.86e-72	212
MS.gene78322.t1	MTR_2g082510	86.777	121	12	1	10	126	3	123	3.42e-69	204
MS.gene78322.t1	MTR_2g082220	84.921	126	11	2	10	129	3	126	4.30e-69	204
MS.gene78322.t1	MTR_2g096610	75.000	120	30	0	18	137	21	140	1.15e-59	181
MS.gene78322.t1	MTR_7g113160	76.068	117	28	0	9	125	16	132	3.78e-59	179
MS.gene78322.t1	MTR_4g063280	79.091	110	23	0	18	127	17	126	2.93e-58	177
MS.gene78322.t1	MTR_2g096570	81.132	106	20	0	19	124	23	128	5.36e-58	177
MS.gene78322.t1	MTR_4g063410	79.439	107	22	0	19	125	24	130	5.44e-58	177
MS.gene78322.t1	MTR_4g071150	80.374	107	21	0	19	125	24	130	6.46e-58	177
MS.gene78322.t1	MTR_4g064005	81.132	106	20	0	19	124	24	129	6.49e-58	177
MS.gene78322.t1	MTR_8g086640	81.132	106	20	0	19	124	24	129	7.30e-58	177
MS.gene78322.t1	MTR_4g064967	81.132	106	20	0	19	124	24	129	8.16e-58	176
MS.gene78322.t1	MTR_6g005150	61.345	119	37	2	19	136	26	136	5.87e-42	136
MS.gene78322.t1	MTR_1g011750	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene78322.t1	MTR_1g011850	58.197	122	49	2	3	123	10	130	1.06e-39	130
MS.gene78322.t1	MTR_1g114050	62.857	105	37	2	20	123	24	127	5.35e-38	125
MS.gene78322.t1	MTR_1g071040	63.462	104	36	2	21	123	28	130	1.15e-37	125
MS.gene78322.t1	MTR_4g063300	67.708	96	23	1	40	127	10	105	7.05e-36	120
MS.gene78322.t1	MTR_4g005910	88.889	45	5	0	82	126	4	48	6.44e-23	85.5
MS.gene78322.t1	MTR_7g010440	54.444	90	41	0	47	136	96	185	2.92e-22	89.7
MS.gene78322.t1	MTR_4g048490	44.860	107	30	2	19	125	26	103	2.83e-20	80.1
MS.gene78322.t1	MTR_1g069770	55.224	67	30	0	62	128	32	98	1.19e-18	75.9
MS.gene78322.t1	MTR_7g027610	41.818	110	32	3	18	123	13	94	8.02e-16	68.9
MS.gene78322.t1	MTR_0653s0030	52.830	53	25	0	50	102	43	95	4.63e-12	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78322.t1	AT1G54690	92.958	142	7	1	1	139	1	142	2.22e-90	258
MS.gene78322.t1	AT1G08880	94.118	136	8	0	4	139	7	142	5.41e-90	258
MS.gene78322.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene78322.t1	AT4G27230	86.290	124	13	1	10	129	3	126	4.66e-70	207
MS.gene78322.t1	AT5G54640	82.946	129	19	1	1	129	1	126	1.59e-69	205
MS.gene78322.t1	AT1G51060	83.871	124	16	1	10	129	3	126	1.51e-68	203
MS.gene78322.t1	AT3G20670	84.677	124	15	1	10	129	3	126	4.76e-68	202
MS.gene78322.t1	AT5G59870	73.643	129	29	2	1	124	1	129	1.24e-60	184
MS.gene78322.t1	AT5G27670	73.438	128	29	1	2	124	3	130	4.78e-58	177
MS.gene78322.t1	AT5G02560	79.439	107	22	0	18	124	23	129	5.23e-57	174
MS.gene78322.t1	AT5G02560	64.885	131	22	1	18	124	23	153	1.37e-51	162
MS.gene78322.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78322.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78322.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78322.t1	AT2G38810	62.617	107	38	2	18	123	27	132	1.12e-38	127
MS.gene78322.t1	AT1G52740	61.905	105	38	2	20	123	27	130	2.42e-38	127
MS.gene78322.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene78322.t1	AT3G54560	60.952	105	39	2	20	123	29	132	4.94e-37	123
MS.gene78322.t1	AT4G13570	43.220	118	65	2	1	117	2	118	3.98e-23	87.8
MS.gene78322.t1	AT4G13570	49.451	91	44	2	28	117	35	124	9.39e-22	84.3

Find 49 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCCCTTTCCAACCTTCTT+TGG	0.128920	7.4:-2877669	None:intergenic
TGCCCTTTCCAACCTTCTTT+GGG	0.261985	7.4:-2877668	None:intergenic
TGAAGAACTCAGCAAGCTTT+TGG	0.286717	7.4:+2877590	MS.gene78322:CDS
TGGTTTGCCTCTTCCACCTT+TGG	0.309774	7.4:-2877165	None:intergenic
AACACGTTCGGCGTATTTAC+CGG	0.321195	7.4:-2877267	None:intergenic
GGAAAGGGCAAAGGAGAAAT+TGG	0.326882	7.4:+2877681	MS.gene78322:CDS
TTTACCGGCCTTGAGGAATC+TGG	0.369624	7.4:-2877252	None:intergenic
AAGACCTGCCTTTGAAGATC+TGG	0.371894	7.4:-2877207	None:intergenic
AGCAAAGTCTGATGAATATT+AGG	0.375759	7.4:-2877645	None:intergenic
TGAAGATCTGGAAACCGATT+TGG	0.392248	7.4:-2877195	None:intergenic
GAAACCGATTTGGCAGCCTT+TGG	0.410658	7.4:-2877185	None:intergenic
TCCACCTTTGGTTGTTCCAG+TGG	0.430840	7.4:-2877153	None:intergenic
CAAACCAAAGGCTGCCAAAT+CGG	0.434148	7.4:+2877181	MS.gene78322:CDS
GGCACATTCAGCTTGCTGTT+AGG	0.440630	7.4:+2877562	MS.gene78322:CDS
TCAGACTTTGCTCCCAAAGA+AGG	0.448013	7.4:+2877656	MS.gene78322:CDS
AGCTCCGGCACCAACACGTT+CGG	0.461862	7.4:-2877279	None:intergenic
AGGACGGCGGAGAGGTAGAC+AGG	0.463287	7.4:-2877302	None:intergenic
CAGCAAGCTGAATGTGCCTT+GGG	0.478109	7.4:-2877557	None:intergenic
GGAACTGTGACCATTGCTAA+TGG	0.483635	7.4:+2877612	MS.gene78322:CDS
CTCCCAAAGAAGGTTGGAAA+GGG	0.488096	7.4:+2877666	MS.gene78322:CDS
ACAGCAAGCTGAATGTGCCT+TGG	0.510267	7.4:-2877558	None:intergenic
GTTTCCAGATCTTCAAAGGC+AGG	0.515636	7.4:+2877203	MS.gene78322:CDS
GATCAGAAAATGAGCTCCAC+TGG	0.517370	7.4:+2877137	None:intergenic
ACTTTGCTCCCAAAGAAGGT+TGG	0.520151	7.4:+2877660	MS.gene78322:CDS
GGAACAACCAAAGGTGGAAG+AGG	0.533476	7.4:+2877158	MS.gene78322:CDS
TACGCCGAACGTGTTGGTGC+CGG	0.543181	7.4:+2877275	MS.gene78322:CDS
ATCGGTTTCCAGATCTTCAA+AGG	0.543380	7.4:+2877199	MS.gene78322:CDS
ATCGCCAGATTCCTCAAGGC+CGG	0.565542	7.4:+2877248	MS.gene78322:CDS
GCTCCCAAAGAAGGTTGGAA+AGG	0.567735	7.4:+2877665	MS.gene78322:CDS
CGGCGTATTTACCGGCCTTG+AGG	0.577173	7.4:-2877259	None:intergenic
GAATCTGGCGATTCTTCCGA+CGG	0.592664	7.4:-2877237	None:intergenic
GGTAAATACGCCGAACGTGT+TGG	0.593895	7.4:+2877269	MS.gene78322:CDS
GGAGAGGTAGACAGGAGCTC+CGG	0.601992	7.4:-2877294	None:intergenic
AGCTCCACTGGAACAACCAA+AGG	0.603686	7.4:+2877149	MS.gene78322:CDS
CCTTGAGTATCTCGCTGCTG+AGG	0.612329	7.4:+2877322	MS.gene78322:CDS
AAGAAGGTTGGAAAGGGCAA+AGG	0.616375	7.4:+2877672	MS.gene78322:CDS
AAGAATCGCCAGATTCCTCA+AGG	0.631643	7.4:+2877244	MS.gene78322:CDS
TCCACTGGAACAACCAAAGG+TGG	0.637545	7.4:+2877152	MS.gene78322:CDS
CCTCAGCAGCGAGATACTCA+AGG	0.638807	7.4:-2877322	None:intergenic
GAAACCCTAAAATTCTTGAG+AGG	0.640292	7.4:-2877709	None:intergenic
CAGAACACCACCATTAGCAA+TGG	0.646082	7.4:-2877622	None:intergenic
AGGTGGAAGAGGCAAACCAA+AGG	0.648004	7.4:+2877169	MS.gene78322:CDS
AGAAGAATCGTATTGTCCCA+AGG	0.648823	7.4:+2877541	MS.gene78322:CDS
AATCTGGCGATTCTTCCGAC+GGG	0.649569	7.4:-2877236	None:intergenic
GCAGGTCTTCAATTTCCCGT+CGG	0.653866	7.4:+2877221	MS.gene78322:CDS
GATACTCAAGGACGGCGGAG+AGG	0.669935	7.4:-2877310	None:intergenic
AGCAGCGAGATACTCAAGGA+CGG	0.684917	7.4:-2877318	None:intergenic
ACTGTGACCATTGCTAATGG+TGG	0.694716	7.4:+2877615	MS.gene78322:CDS
AGCGAGATACTCAAGGACGG+CGG	0.736224	7.4:-2877315	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATCTTTTTTGTTTAATTTA+GGG	+	chr7.4:2877375-2877394	MS.gene78322:intron	10.0%
!!!	CTATCTTTTTTGTTTAATTT+AGG	+	chr7.4:2877374-2877393	MS.gene78322:intron	15.0%
!!	ATATGAATCTGATAATTGAA+AGG	+	chr7.4:2877444-2877463	MS.gene78322:intron	20.0%
!!	TAAACAAAAAAGATAGTGAA+AGG	-	chr7.4:2877370-2877389	None:intergenic	20.0%
!!!	ATTTTTTGTTGATTAGGTTT+TGG	+	chr7.4:2877488-2877507	MS.gene78322:intron	20.0%
!!!	CTGTTAATTTTTTGTTGATT+AGG	+	chr7.4:2877482-2877501	MS.gene78322:intron	20.0%
!!!	GAATTGTCTTTGTTTTATTA+GGG	+	chr7.4:2877417-2877436	MS.gene78322:intron	20.0%
!	AAAGATAGTGAAAGGAAAAT+TGG	-	chr7.4:2877362-2877381	None:intergenic	25.0%
!!!	CGAATTGTCTTTGTTTTATT+AGG	+	chr7.4:2877416-2877435	MS.gene78322:intron	25.0%
	AGCAAAGTCTGATGAATATT+AGG	-	chr7.4:2877648-2877667	None:intergenic	30.0%
	CAAAGACAATTCGATTGAAT+TGG	-	chr7.4:2877409-2877428	None:intergenic	30.0%
!!!	TGTTGATTAGGTTTTGGAAT+TGG	+	chr7.4:2877494-2877513	MS.gene78322:intron	30.0%
	AGAAGAATCGTATTGTCCCA+AGG	+	chr7.4:2877541-2877560	MS.gene78322:CDS	40.0%
	TGAAGATCTGGAAACCGATT+TGG	-	chr7.4:2877198-2877217	None:intergenic	40.0%
!	ATCGGTTTCCAGATCTTCAA+AGG	+	chr7.4:2877199-2877218	MS.gene78322:CDS	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	+	chr7.4:2877591-2877610	MS.gene78322:CDS	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	+	chr7.4:2877590-2877609	MS.gene78322:CDS	40.0%
!!!	GATTAGGTTTTGGAATTGGC+TGG	+	chr7.4:2877498-2877517	MS.gene78322:intron	40.0%
	AACACGTTCGGCGTATTTAC+CGG	-	chr7.4:2877270-2877289	None:intergenic	45.0%
	AAGAAGGTTGGAAAGGGCAA+AGG	+	chr7.4:2877672-2877691	MS.gene78322:CDS	45.0%
	AAGAATCGCCAGATTCCTCA+AGG	+	chr7.4:2877244-2877263	MS.gene78322:CDS	45.0%
	ACTGTGACCATTGCTAATGG+TGG	+	chr7.4:2877615-2877634	MS.gene78322:CDS	45.0%
	ACTTTGCTCCCAAAGAAGGT+TGG	+	chr7.4:2877660-2877679	MS.gene78322:CDS	45.0%
	CAAACCAAAGGCTGCCAAAT+CGG	+	chr7.4:2877181-2877200	MS.gene78322:CDS	45.0%
	CAGAACACCACCATTAGCAA+TGG	-	chr7.4:2877625-2877644	None:intergenic	45.0%
	CTCCCAAAGAAGGTTGGAAA+GGG	+	chr7.4:2877666-2877685	MS.gene78322:CDS	45.0%
	GGAAAGGGCAAAGGAGAAAT+TGG	+	chr7.4:2877681-2877700	MS.gene78322:CDS	45.0%
	GGAACTGTGACCATTGCTAA+TGG	+	chr7.4:2877612-2877631	MS.gene78322:CDS	45.0%
	GTTTCCAGATCTTCAAAGGC+AGG	+	chr7.4:2877203-2877222	MS.gene78322:CDS	45.0%
	TCAGACTTTGCTCCCAAAGA+AGG	+	chr7.4:2877656-2877675	MS.gene78322:CDS	45.0%
	TGCCCTTTCCAACCTTCTTT+GGG	-	chr7.4:2877671-2877690	None:intergenic	45.0%
	TTGCCCTTTCCAACCTTCTT+TGG	-	chr7.4:2877672-2877691	None:intergenic	45.0%
!	AAGACCTGCCTTTGAAGATC+TGG	-	chr7.4:2877210-2877229	None:intergenic	45.0%
	AATCTGGCGATTCTTCCGAC+GGG	-	chr7.4:2877239-2877258	None:intergenic	50.0%
	ACAGCAAGCTGAATGTGCCT+TGG	-	chr7.4:2877561-2877580	None:intergenic	50.0%
	AGCAGCGAGATACTCAAGGA+CGG	-	chr7.4:2877321-2877340	None:intergenic	50.0%
	AGCTCCACTGGAACAACCAA+AGG	+	chr7.4:2877149-2877168	MS.gene78322:CDS	50.0%
	AGGTGGAAGAGGCAAACCAA+AGG	+	chr7.4:2877169-2877188	MS.gene78322:CDS	50.0%
	CAGCAAGCTGAATGTGCCTT+GGG	-	chr7.4:2877560-2877579	None:intergenic	50.0%
	GAATCTGGCGATTCTTCCGA+CGG	-	chr7.4:2877240-2877259	None:intergenic	50.0%
	GCAGGTCTTCAATTTCCCGT+CGG	+	chr7.4:2877221-2877240	MS.gene78322:CDS	50.0%
	GCTCCCAAAGAAGGTTGGAA+AGG	+	chr7.4:2877665-2877684	MS.gene78322:CDS	50.0%
	GGAACAACCAAAGGTGGAAG+AGG	+	chr7.4:2877158-2877177	MS.gene78322:CDS	50.0%
	GGTAAATACGCCGAACGTGT+TGG	+	chr7.4:2877269-2877288	MS.gene78322:CDS	50.0%
	TCCACCTTTGGTTGTTCCAG+TGG	-	chr7.4:2877156-2877175	None:intergenic	50.0%
	TCCACTGGAACAACCAAAGG+TGG	+	chr7.4:2877152-2877171	MS.gene78322:CDS	50.0%
	TTTACCGGCCTTGAGGAATC+TGG	-	chr7.4:2877255-2877274	None:intergenic	50.0%
!	TGGTTTGCCTCTTCCACCTT+TGG	-	chr7.4:2877168-2877187	None:intergenic	50.0%
!!	GAAACCGATTTGGCAGCCTT+TGG	-	chr7.4:2877188-2877207	None:intergenic	50.0%
!!	GGCACATTCAGCTTGCTGTT+AGG	+	chr7.4:2877562-2877581	MS.gene78322:CDS	50.0%
	AGCGAGATACTCAAGGACGG+CGG	-	chr7.4:2877318-2877337	None:intergenic	55.0%
	ATCGCCAGATTCCTCAAGGC+CGG	+	chr7.4:2877248-2877267	MS.gene78322:CDS	55.0%
	CCTCAGCAGCGAGATACTCA+AGG	-	chr7.4:2877325-2877344	None:intergenic	55.0%
	CCTTGAGTATCTCGCTGCTG+AGG	+	chr7.4:2877322-2877341	MS.gene78322:CDS	55.0%
	AGCTCCGGCACCAACACGTT+CGG	-	chr7.4:2877282-2877301	None:intergenic	60.0%
	CGGCGTATTTACCGGCCTTG+AGG	-	chr7.4:2877262-2877281	None:intergenic	60.0%
	GATACTCAAGGACGGCGGAG+AGG	-	chr7.4:2877313-2877332	None:intergenic	60.0%
	GGAGAGGTAGACAGGAGCTC+CGG	-	chr7.4:2877297-2877316	None:intergenic	60.0%
!	TACGCCGAACGTGTTGGTGC+CGG	+	chr7.4:2877275-2877294	MS.gene78322:CDS	60.0%
	AGGACGGCGGAGAGGTAGAC+AGG	-	chr7.4:2877305-2877324	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	2877146	2877725	2877146	ID=MS.gene78322
chr7.4	mRNA	2877146	2877725	2877146	ID=MS.gene78322.t1;Parent=MS.gene78322
chr7.4	exon	2877146	2877343	2877146	ID=MS.gene78322.t1.exon1;Parent=MS.gene78322.t1
chr7.4	CDS	2877146	2877343	2877146	ID=cds.MS.gene78322.t1;Parent=MS.gene78322.t1
chr7.4	exon	2877504	2877725	2877504	ID=MS.gene78322.t1.exon2;Parent=MS.gene78322.t1
chr7.4	CDS	2877504	2877725	2877504	ID=cds.MS.gene78322.t1;Parent=MS.gene78322.t1

Gene Sequence

>MS.gene78322

ATGAGCTCCACTGGAACAACCAAAGGTGGAAGAGGCAAACCAAAGGCTGCCAAATCGGTTTCCAGATCTTCAAAGGCAGGTCTTCAATTTCCCGTCGGAAGAATCGCCAGATTCCTCAAGGCCGGTAAATACGCCGAACGTGTTGGTGCCGGAGCTCCTGTCTACCTCTCCGCCGTCCTTGAGTATCTCGCTGCTGAGGTTTGTTTCTTTTCTCCAATTTTCCTTTCACTATCTTTTTTGTTTAATTTAGGGTTCTAGTTCCAATTCAATCGAATTGTCTTTGTTTTATTAGGGTTTTATATGAATCTGATAATTGAAAGGTAGAAACTCAATTTTCTGTTAATTTTTTGTTGATTAGGTTTTGGAATTGGCTGGAAACGCTGCTAGAGACAACAAGAAGAATCGTATTGTCCCAAGGCACATTCAGCTTGCTGTTAGGAACGATGAAGAACTCAGCAAGCTTTTGGGAACTGTGACCATTGCTAATGGTGGTGTTCTGCCTAATATTCATCAGACTTTGCTCCCAAAGAAGGTTGGAAAGGGCAAAGGAGAAATTGGATCTGCCTCTCAAGAATTTTAG

Protein sequence

>MS.gene78322.t1

MSSTGTTKGGRGKPKAAKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF